Metagenome Family F041791

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041791
Family Type	Metagenome
Number of Sequences	159
Average Sequence Length	52 residues
Representative Sequence	MGFSGIRAVIMVGVLVVLGIAVFKFDLPGWLLPVGLIATGAVLKGSEERASQ
Number of Associated Samples	116
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.52 %
% of genes near scaffold ends (potentially truncated)	20.75 %
% of genes from short scaffolds (< 2000 bps)	72.96 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (57.862 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.321 % of family members)
Environment Ontology (ENVO)	Unclassified (33.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.767 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.50% β-sheet: 0.00% Coil/Unstructured: 47.50%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF00296	Bac_luciferase	9.43
PF07228	SpoIIE	8.18
PF14026	DUF4242	6.29
PF13561	adh_short_C2	4.40
PF00903	Glyoxalase	1.89
PF13619	KTSC	1.89
PF00691	OmpA	1.89
PF12681	Glyoxalase_2	1.89
PF02518	HATPase_c	1.89
PF02776	TPP_enzyme_N	1.26
PF12697	Abhydrolase_6	1.26
PF00465	Fe-ADH	1.26
PF12706	Lactamase_B_2	1.26
PF13620	CarboxypepD_reg	1.26
PF00496	SBP_bac_5	1.26
PF08874	DUF1835	0.63
PF13709	DUF4159	0.63
PF14534	DUF4440	0.63
PF02824	TGS	0.63
PF13975	gag-asp_proteas	0.63
PF08450	SGL	0.63
PF03737	RraA-like	0.63
PF02566	OsmC	0.63
PF07992	Pyr_redox_2	0.63
PF00535	Glycos_transf_2	0.63
PF03572	Peptidase_S41	0.63
PF03781	FGE-sulfatase	0.63
PF01564	Spermine_synth	0.63
PF00196	GerE	0.63
PF01436	NHL	0.63
PF00936	BMC	0.63
PF00106	adh_short	0.63
PF00072	Response_reg	0.63
PF03401	TctC	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	9.43
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	1.26
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	1.26
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	1.26
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	1.26
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.63
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.63
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.63
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.63
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.86 %
Unclassified	root	N/A	42.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.86 %
Unclassified	root	N/A	42.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.86 %
Unclassified	root	N/A	42.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.43 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.52 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	0.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.89 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	1.89 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Nitrospinia	class	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia	0.63 %
Candidatus Saccharibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	0.63 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.63 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.63 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.81 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.89 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	1.89 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
unclassified Saccharibacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria	0.63 %
Nitrospinales	order	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales	0.63 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.89 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	1.89 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Nitrospinaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae	0.63 %
Candidatus Saccharibacteria bacterium QS_5_54_17	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria → Candidatus Saccharibacteria bacterium QS_5_54_17	0.63 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.63 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.89 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	1.89 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.26 %
Nitrospina	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	0.63 %
Candidatus Saccharibacteria bacterium QS_5_54_17	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria → Candidatus Saccharibacteria bacterium QS_5_54_17	0.63 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.63 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0796611	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105830029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3187	Open in IMG/M
3300000559\|F14TC_101842266	Not Available	660	Open in IMG/M
3300000559\|F14TC_104251610	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300000559\|F14TC_108927976	Not Available	714	Open in IMG/M
3300000955\|JGI1027J12803_100474771	Not Available	629	Open in IMG/M
3300001431\|F14TB_108164869	Not Available	571	Open in IMG/M
3300003267\|soilL1_10005549	All Organisms → cellular organisms → Bacteria	7637	Open in IMG/M
3300004062\|Ga0055500_10066122	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300004114\|Ga0062593_101382612	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300004114\|Ga0062593_101728062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300004114\|Ga0062593_103222786	Not Available	523	Open in IMG/M
3300004156\|Ga0062589_100667723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	916	Open in IMG/M
3300004156\|Ga0062589_101362353	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300004156\|Ga0062589_102239156	Not Available	560	Open in IMG/M
3300004157\|Ga0062590_101348175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300004463\|Ga0063356_100177517	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300004463\|Ga0063356_100385500	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300004463\|Ga0063356_101309914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	1060	Open in IMG/M
3300004463\|Ga0063356_101459419	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300004463\|Ga0063356_102311473	Not Available	820	Open in IMG/M
3300004463\|Ga0063356_102436829	Not Available	801	Open in IMG/M
3300004643\|Ga0062591_100129892	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300005093\|Ga0062594_103011600	Not Available	526	Open in IMG/M
3300005294\|Ga0065705_10331224	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria → Candidatus Saccharibacteria bacterium QS_5_54_17	991	Open in IMG/M
3300005295\|Ga0065707_10368637	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005295\|Ga0065707_10866744	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005330\|Ga0070690_100524580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300005332\|Ga0066388_100714705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	1607	Open in IMG/M
3300005332\|Ga0066388_104698412	Not Available	695	Open in IMG/M
3300005332\|Ga0066388_107459576	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005332\|Ga0066388_107637647	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005332\|Ga0066388_107782910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005354\|Ga0070675_100367011	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005354\|Ga0070675_101441799	Not Available	635	Open in IMG/M
3300005446\|Ga0066686_10238654	Not Available	1225	Open in IMG/M
3300005457\|Ga0070662_101780483	Not Available	532	Open in IMG/M
3300005543\|Ga0070672_101639265	Not Available	577	Open in IMG/M
3300005564\|Ga0070664_100426051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300005577\|Ga0068857_100117396	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300005713\|Ga0066905_101106795	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005719\|Ga0068861_100236377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1552	Open in IMG/M
3300005764\|Ga0066903_100338752	All Organisms → cellular organisms → Bacteria → Acidobacteria	2419	Open in IMG/M
3300005764\|Ga0066903_102416117	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005764\|Ga0066903_103044919	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300005764\|Ga0066903_106217170	Not Available	624	Open in IMG/M
3300005829\|Ga0074479_10707053	All Organisms → cellular organisms → Bacteria → Terrabacteria group	558	Open in IMG/M
3300006844\|Ga0075428_100221837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2041	Open in IMG/M
3300006854\|Ga0075425_102073345	Not Available	635	Open in IMG/M
3300006876\|Ga0079217_11039609	Not Available	604	Open in IMG/M
3300007004\|Ga0079218_10003740	All Organisms → cellular organisms → Bacteria → Proteobacteria	6386	Open in IMG/M
3300007004\|Ga0079218_13660829	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300007255\|Ga0099791_10684494	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009100\|Ga0075418_10743750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1058	Open in IMG/M
3300009177\|Ga0105248_13363090	Not Available	508	Open in IMG/M
3300010043\|Ga0126380_11449602	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010047\|Ga0126382_10050270	All Organisms → cellular organisms → Bacteria → Acidobacteria	2437	Open in IMG/M
3300010047\|Ga0126382_10913221	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300010047\|Ga0126382_11726619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300010047\|Ga0126382_12139432	Not Available	536	Open in IMG/M
3300010304\|Ga0134088_10007359	All Organisms → cellular organisms → Bacteria	4639	Open in IMG/M
3300010359\|Ga0126376_12610092	Not Available	554	Open in IMG/M
3300010360\|Ga0126372_10569995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1079	Open in IMG/M
3300010361\|Ga0126378_12552024	Not Available	584	Open in IMG/M
3300010362\|Ga0126377_11274812	Not Available	806	Open in IMG/M
3300010398\|Ga0126383_11194262	Not Available	851	Open in IMG/M
3300010398\|Ga0126383_11209378	Not Available	845	Open in IMG/M
3300010398\|Ga0126383_11268556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300010400\|Ga0134122_12127606	Not Available	603	Open in IMG/M
3300011420\|Ga0137314_1101623	Not Available	705	Open in IMG/M
3300011438\|Ga0137451_1047134	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300012157\|Ga0137353_1002879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2430	Open in IMG/M
3300012685\|Ga0137397_10195353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1505	Open in IMG/M
3300012900\|Ga0157292_10342704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012903\|Ga0157289_10186047	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012918\|Ga0137396_11024418	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012922\|Ga0137394_10035389	All Organisms → cellular organisms → Bacteria	4079	Open in IMG/M
3300012922\|Ga0137394_10310376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1347	Open in IMG/M
3300012944\|Ga0137410_10622494	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300012957\|Ga0164303_11283585	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012971\|Ga0126369_10557578	Not Available	1211	Open in IMG/M
3300012971\|Ga0126369_11265537	Not Available	828	Open in IMG/M
3300012984\|Ga0164309_11758441	Not Available	532	Open in IMG/M
3300014325\|Ga0163163_10586433	Not Available	1178	Open in IMG/M
3300014326\|Ga0157380_10023115	All Organisms → cellular organisms → Bacteria → Proteobacteria	4687	Open in IMG/M
3300014745\|Ga0157377_11358789	Not Available	558	Open in IMG/M
3300015200\|Ga0173480_10512691	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300015241\|Ga0137418_10051004	All Organisms → cellular organisms → Bacteria	3799	Open in IMG/M
3300015371\|Ga0132258_10039081	All Organisms → cellular organisms → Bacteria	10737	Open in IMG/M
3300015371\|Ga0132258_10061765	All Organisms → cellular organisms → Bacteria	8640	Open in IMG/M
3300015371\|Ga0132258_10486605	All Organisms → cellular organisms → Bacteria	3083	Open in IMG/M
3300015371\|Ga0132258_11619686	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300015371\|Ga0132258_12511867	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300015372\|Ga0132256_100010892	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	7871	Open in IMG/M
3300015374\|Ga0132255_101490264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300015374\|Ga0132255_104573553	Not Available	586	Open in IMG/M
3300015374\|Ga0132255_105078701	Not Available	557	Open in IMG/M
3300016294\|Ga0182041_10376078	Not Available	1201	Open in IMG/M
3300016357\|Ga0182032_10401501	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300017656\|Ga0134112_10017393	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300017792\|Ga0163161_11570492	Not Available	579	Open in IMG/M
3300018000\|Ga0184604_10026510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1433	Open in IMG/M
3300018028\|Ga0184608_10270210	Not Available	748	Open in IMG/M
3300018052\|Ga0184638_1245968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300018083\|Ga0184628_10003152	All Organisms → cellular organisms → Bacteria → Acidobacteria	7874	Open in IMG/M
3300018083\|Ga0184628_10426499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	692	Open in IMG/M
3300018469\|Ga0190270_13316357	Not Available	510	Open in IMG/M
3300018481\|Ga0190271_12442592	Not Available	626	Open in IMG/M
3300019362\|Ga0173479_10004345	All Organisms → cellular organisms → Bacteria → Proteobacteria	3335	Open in IMG/M
3300019362\|Ga0173479_10386876	Not Available	670	Open in IMG/M
3300019878\|Ga0193715_1001877	All Organisms → cellular organisms → Bacteria → Proteobacteria	4716	Open in IMG/M
3300019879\|Ga0193723_1004642	All Organisms → cellular organisms → Bacteria	4742	Open in IMG/M
3300019879\|Ga0193723_1072331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	994	Open in IMG/M
3300019881\|Ga0193707_1002506	All Organisms → cellular organisms → Bacteria	6683	Open in IMG/M
3300020004\|Ga0193755_1007094	All Organisms → cellular organisms → Bacteria	3634	Open in IMG/M
3300025885\|Ga0207653_10014439	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300025903\|Ga0207680_10048371	All Organisms → cellular organisms → Bacteria → Proteobacteria	2526	Open in IMG/M
3300025925\|Ga0207650_10198059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300025926\|Ga0207659_10004555	All Organisms → cellular organisms → Bacteria	8382	Open in IMG/M
3300025926\|Ga0207659_10480991	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300025933\|Ga0207706_11670656	Not Available	514	Open in IMG/M
3300025936\|Ga0207670_10132501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1828	Open in IMG/M
3300025942\|Ga0207689_11639031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300025971\|Ga0210102_1062668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	801	Open in IMG/M
3300025986\|Ga0207658_11386506	Not Available	643	Open in IMG/M
3300027682\|Ga0209971_1136553	Not Available	604	Open in IMG/M
3300027873\|Ga0209814_10446770	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300027886\|Ga0209486_10076124	Not Available	1735	Open in IMG/M
3300028380\|Ga0268265_10768939	Not Available	936	Open in IMG/M
3300028381\|Ga0268264_10295113	Not Available	1524	Open in IMG/M
3300028792\|Ga0307504_10437598	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300028819\|Ga0307296_10170322	Not Available	1179	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1121573	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031170\|Ga0307498_10333698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300031226\|Ga0307497_10351615	Not Available	691	Open in IMG/M
3300031548\|Ga0307408_101895451	Not Available	571	Open in IMG/M
3300031820\|Ga0307473_10815190	Not Available	667	Open in IMG/M
3300031910\|Ga0306923_11958988	Not Available	596	Open in IMG/M
3300032174\|Ga0307470_10051832	All Organisms → cellular organisms → Bacteria → Proteobacteria	2107	Open in IMG/M
3300032180\|Ga0307471_100298841	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300032180\|Ga0307471_101526199	Not Available	826	Open in IMG/M
3300032261\|Ga0306920_101741767	Not Available	881	Open in IMG/M
3300032770\|Ga0335085_11957537	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300033233\|Ga0334722_10540957	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300033485\|Ga0316626_11539418	Not Available	599	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.18%
Host-Associated	Host-Associated	30.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.64%
Plants	Host-Associated → Plants	30.82%
Aquatic	Environmental → Aquatic	7.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.47%
Sediment	Environmental → Aquatic → Sediment	5.66%
Marine	Environmental → Aquatic → Marine	1.26%
Roots	Host-Associated → Plants → Roots	1.26%
Freshwater	Environmental → Aquatic → Freshwater	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.43%
Loam	Environmental → Terrestrial → Soil → Loam	11.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.03%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.26%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.26%
Lake	Environmental → Aquatic → Freshwater → Lake	0.63%
Sand	Environmental → Terrestrial → Soil → Sand	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.26%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.29%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.52%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.63%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.63%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_07966111	2228664022	Soil	MGFSGSRAIIMIGVLVVLVVAVTKFELPGWLLPVGLIATGALLKGAEKAASN
INPhiseqgaiiFebDRAFT_1058300292	3300000364	Soil	MGFSGSRAIIMIGVLVVLVVAVTKFELPGWLLPVGLIATGALLKGAEKAASN*
F14TC_1018422662	3300000559	Soil	MGFSGLRAIIMVAVLIVLLLAVTKFDLPGWLLRVGLIAAGVLLKGAEKSASQQ*
F14TC_1042516102	3300000559	Soil	MSFSGTRALVLVGVLVVLGVGVFKFHLPGWLLPIGLIATGVLLKGADSRASE*
F14TC_1089279762	3300000559	Soil	MGFSGLRAIIMIAVLVVLVVAVTKFDLPGWILPVGLLGTGALLKNSEKAASN*
JGI1027J12803_1004747712	3300000955	Soil	KGVAMGFSGSRAIIMIGVLVVLVVAVTKFELPGWLLPVGLIATGALLKGAEKAASN*
F14TB_1081648692	3300001431	Soil	MGFSXMRAVIMIGMLIALGIGVFKFDLPGWILPVGLLATGVVLKGSEQRASQ*
soilL1_1000554913	3300003267	Sugarcane Root And Bulk Soil	MGFSGARAFLMIGALVVLVVAVTKFDLPGWIIPVGLIVAGVVVREKRA*
Ga0055500_100661221	3300004062	Natural And Restored Wetlands	MGFSGIRALIMVAVLVVLMLGVTTYDLPGWLLPVGLIGTGVLLKAWENRASS*
Ga0062593_1013826122	3300004114	Soil	MGFSGLRAVIMVAVLVVLALGVTQYDLPGWLLPAGLIGTGVLLK
Ga0062593_1017280622	3300004114	Soil	MGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ*
Ga0062593_1032227861	3300004114	Soil	MGFSGSRAIIMIAVLIGLIVAITKFDLPGWLLPVGLIGTGALLKNAEKAASN*
Ga0062589_1006677232	3300004156	Soil	MGFSGLRAVIMVAVLVVLALGVTQYDLPGWLLPAGLIGTGVLLKAWES
Ga0062589_1013623532	3300004156	Soil	MGFSGLRAVAMIGLLIVLVLAVTKFDLPGWIVPVGLILGGVVLKGMEARQTT*
Ga0062589_1022391561	3300004156	Soil	MSFSGTRAAVLVGVLVVLGVSVFKFGLPGWLLPLGLIATGLVLKGAEHTE*
Ga0062590_1002878932	3300004157	Soil	MGFSGARAVLMIVALVLLVVLVTKFDLPGWIIPVGLIVAGVLVKERRA*
Ga0062590_1013481752	3300004157	Soil	MRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ*
Ga0063356_1001775172	3300004463	Arabidopsis Thaliana Rhizosphere	MGFSGSRAIIMIAVLIGLIVAITKFDLPGWLLPVGLIGTGALLKNAEKAASNQS*
Ga0063356_1003855004	3300004463	Arabidopsis Thaliana Rhizosphere	MGFSGIRAVIMVGVLVVLGIAVFKFDLPGWLLPVGLIATGAVLKGSEERASQ*
Ga0063356_1013099142	3300004463	Arabidopsis Thaliana Rhizosphere	MGFSGSRAIIMIAVLIVLVVAVTKFDLPGWLLPVGLIGTGALLKNAEKAASN*
Ga0063356_1014594192	3300004463	Arabidopsis Thaliana Rhizosphere	MGFSGSRAIILVAVFVVLLLAVTRLGLPGWLLPVGLLATGALLKNAEKSASGSNEA*
Ga0063356_1016890081	3300004463	Arabidopsis Thaliana Rhizosphere	MGFSGARAVMMIAALVVLVVAVTKFDLPGWIIPVGLIVAGVLVRERRA*
Ga0063356_1023114732	3300004463	Arabidopsis Thaliana Rhizosphere	MGFSGVRAVILAVVFVVLVLAVTKLDWPGWFIPVGLLVSGALLKGWEQRASS*
Ga0063356_1024368292	3300004463	Arabidopsis Thaliana Rhizosphere	MGFSGIRAVIMVVMFVLLLMAVTKMNMPGWILPAGLILTGIILKSVNVSRTQTQ*
Ga0063356_1028255071	3300004463	Arabidopsis Thaliana Rhizosphere	MGFSGLRALIMIAILIGLVLAVTKFDLPGWILPLGLITAGIILKGTEQKASQ*
Ga0062591_1001298922	3300004643	Soil	MGFSGLRAVIMVAVLVVLALGVTQYDLPGWLLPAGLIGTGVLLKAWESRASS*
Ga0062594_1030116002	3300005093	Soil	MSFSGTRALLLVGVLVVLGVGVFKFNLPGWLLPVGLITTGVLLKGAETRASE*
Ga0065705_103312242	3300005294	Switchgrass Rhizosphere	MSFSGTRAAVLVGVLVALGVAVFKFGLPGWLLPLGLVATGIVLRGAENHTSE*
Ga0065707_103686373	3300005295	Switchgrass Rhizosphere	MGFSGLRAVIMVAVLVVLGLGVTQYDLPGWLLPVGLIGTGVLLKA
Ga0065707_108667442	3300005295	Switchgrass Rhizosphere	MGFSGLRALIMVAVLVVLVLGVTTYDLPGWLLPVGLIGAGVLLKAWESRASS*
Ga0070690_1005245801	3300005330	Switchgrass Rhizosphere	MGFSGMRALIMIGMLIALGIGVFKFGLPGWILPVGLLATGVVLKGSEEHASQ*
Ga0066388_1007147052	3300005332	Tropical Forest Soil	MGFSGSRAIIMIAVLIGLVVAVTKFDLPGWLLPVGLLATGAVLKNAEKAASN*
Ga0066388_1046984121	3300005332	Tropical Forest Soil	MGFSGVRALILIGVLVVLVVAVTKFDFPGWFLPVGLLATAAILKGSEQRASS*
Ga0066388_1074595762	3300005332	Tropical Forest Soil	MGFSGARAIIMIGVLVVLIVAISKFDLPGWLLPVGLLASAAVL
Ga0066388_1076376471	3300005332	Tropical Forest Soil	AVILMVVLIVLIVAVTKFDLPGWLLPVGLIASAALLKNAEKAASDSSGT*
Ga0066388_1077829102	3300005332	Tropical Forest Soil	MGFSGIRAVIMVAVLIVLVVAVTKFDLPGWLLPVGLIASGALLKNAERAASGSN*
Ga0070675_1003670112	3300005354	Miscanthus Rhizosphere	MGFSGLRAIIMVAVLIVLVLAVTKFNMPGWLLPVGLLATGAVLKSAEKSASQQR*
Ga0070675_1014417993	3300005354	Miscanthus Rhizosphere	MGFSGIRAVIMIAVLVGLLLAVTKFDLPGWILPVGLILCGVVLKNAEQRASS*
Ga0066686_102386541	3300005446	Soil	MDGGAMGFSGVRAVILLGILVVLVVAVTKFDLPGWLLPVGLILSGAVLKRSEQRASS*
Ga0070662_1017804832	3300005457	Corn Rhizosphere	DKEARMGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ*
Ga0070672_1016392651	3300005543	Miscanthus Rhizosphere	MGFSGLRAIIMVAVLVVLVLAVTKFNMPGWLLPVGLLATGAVLKGAEKSASQQR*
Ga0070664_1004260511	3300005564	Corn Rhizosphere	MGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERAS
Ga0068857_1001173962	3300005577	Corn Rhizosphere	MSFSGTRALVLIGVLVLLGVGVFKFNLPAWLLPVGLVATGVVLKGAEARASE*
Ga0066905_1011067952	3300005713	Tropical Forest Soil	MGFSGLRAIIMIAVLVVLVVAVTKFDLPGWLLPVGLLGTGALLKNSEKAASN*
Ga0068861_1002363773	3300005719	Switchgrass Rhizosphere	MGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVL
Ga0066903_1003387522	3300005764	Tropical Forest Soil	MGFSGIRAVILLAVLVVLVLAVTKFDLPGWLLPIGLVVSALVLKNSEQRASS*
Ga0066903_1024161172	3300005764	Tropical Forest Soil	MRTGKGGHIMSFSGLRAIILMAVLISLVLGVSRFDLPGWIVPVGLLVTGVVLKKSEKTA*
Ga0066903_1030449192	3300005764	Tropical Forest Soil	MSFSGLRAIILVAVLFSLVLAVSKLDLPGWIVPVGLLVTGVVLKKSEKAA*
Ga0066903_1062171702	3300005764	Tropical Forest Soil	MGFSGSRAIIMIAVLVVLAIAVTKFDLPGWLLPVGLVATGVFLKNAEKAASN*
Ga0066903_1075935662	3300005764	Tropical Forest Soil	MGFSGLRAIVMIGVLIVLVVAVTKFDLPGWCLPVGLIGAGVLMKGWEKRASS*
Ga0074479_107070531	3300005829	Sediment (Intertidal)	MGFSGPRAIIMVAVLIVLVVGIGQYDLPGWILPVGLIGTGVLLKAWEKRASS*
Ga0068871_1024212511	3300006358	Miscanthus Rhizosphere	MGFSGIRAVILIAVLLALVIGVSKFDLPGWFVPVGLLATGAILRNAEQRASN*
Ga0075428_1002218372	3300006844	Populus Rhizosphere	MGFSGIRAVILVLVLVALVFGVTKFDLPGWLLPVGLIITALALKNSEQQASS*
Ga0075431_1008030202	3300006847	Populus Rhizosphere	MGFSGARAFLMIGALVVLVVAVTKFDLPGWIIPVGLIVAGVIVREKRA*
Ga0075425_1020733451	3300006854	Populus Rhizosphere	MGFSGVRAIIMVAILIVLIVAVTKFDLPGWLLPVGLLASGALLKNAEKAASN*
Ga0079217_110396092	3300006876	Agricultural Soil	MGFSGIRAVIMVGVLVVLGIAVFKFDLPGWLLPVGLIATGAVLKGSEEHASQ*
Ga0079215_116890201	3300006894	Agricultural Soil	FSGARAVMMIAALVVLVVAVTKFDLPGWIIPVGLIVAGVLVRERRA*
Ga0079216_110004302	3300006918	Agricultural Soil	MGFSGARAVMMIAALVVLVVAVTKFDLPGWIIPVGLVVAGVLVRERRA*
Ga0079218_100037404	3300007004	Agricultural Soil	MGFSGIRAVIMVAVLVVLGIAVFKFDLPGWLLPVGLIATGAVLKGSEEHASQ*
Ga0079218_136608292	3300007004	Agricultural Soil	MGFSGIRAVIMGVVLVVLGISVFAFDLPGWLLPVGLLATGAVLKGSEENASQ*
Ga0099791_106844941	3300007255	Vadose Zone Soil	MGFSGLRALIMVAVLVLLVFGVTTYDLPGWILPVGLIGAGVLMKAWESRASS*
Ga0111539_128503112	3300009094	Populus Rhizosphere	MGFSGVRAMILIAVLLVLVFAVSKFDFPGWFVPVGLLATAAVLKGTEQRASS*
Ga0075418_107437502	3300009100	Populus Rhizosphere	MGFSGIGAVILVLVLVALVFGVTKFDLPGWLLPVGLIITALALKNSEQQASS*
Ga0105248_133630901	3300009177	Switchgrass Rhizosphere	MSFSGTRALVLIGVLVLLGVGVFKFNLPAWLLPVGLVATGVVLKGAEARAS
Ga0126380_114496022	3300010043	Tropical Forest Soil	MGFSGSRAIIMIAVLVVLVVAVTKFELPGWLLPVGLIATGALLRGAEKAASN*
Ga0126382_100502703	3300010047	Tropical Forest Soil	YMGFSGMRAIIMVAVLIVLVIAVTKFDLPGWLLPVGLLATGALLKGAEKSASKSSQV*
Ga0126382_109132212	3300010047	Tropical Forest Soil	MGFSGVRAIIMVAILVVLILAVTKFDLPGWLLPVGLLASGALLKNAEKAASN*
Ga0126382_117266191	3300010047	Tropical Forest Soil	VEGGTMGFSGIRAVILVAVLIVLVVAITKFDLPGWLLPVGLIISEAVLKGSEQRASQ*
Ga0126382_121394321	3300010047	Tropical Forest Soil	MGFSGVRALILVAVLIVLVLAVTRFDLPGWIVPVGLVLSGMVLKHSEQQASS*
Ga0134088_100073594	3300010304	Grasslands Soil	MGFSGVRAVILLGILVVLVVAVTKFDLPGWLLPVGLILSGAVLKRSEQRASS*
Ga0126376_126100921	3300010359	Tropical Forest Soil	MGFSGIRAVIMVAVLIVLVVAVTKFDLPGWLLPVGLIASGALLKNGERAASGSN*
Ga0126372_105699952	3300010360	Tropical Forest Soil	MGFSGIRAAIMVAVLIVLVVAVTKFDLPGWLLPVGLIASGALLKNAERAASGSN*
Ga0126378_125520242	3300010361	Tropical Forest Soil	MGFSGVRAVILIAVLIVLVVAVMKFDLPGWLLPVGLIASAALLKNAEKAAS*
Ga0126377_112748122	3300010362	Tropical Forest Soil	MGFSGIRAVIMVAVLIVLVVAVTKFDLPGWLLPVGLIASATLLKNAEKAASKSS*
Ga0126383_111942623	3300010398	Tropical Forest Soil	RKESPMGFSGSRAIIMIAVLVVLVVAVTKFDLPGWLLPVGLLASGALLKGAEKAASN*
Ga0126383_112093782	3300010398	Tropical Forest Soil	MGFSGIRAVIMVAVLIMLVVAVTKFDLPGWLLPVGLIASGALLKNAERAASGSN*
Ga0126383_112685562	3300010398	Tropical Forest Soil	MSFSGLRAIILMAVLISLVLGVSRFDLPGWIVPVGLLVTGVVLKKSEKTA*
Ga0134122_121276061	3300010400	Terrestrial Soil	MGFSGIRAILMIAVFVVLLLAVTKLGLPGWLLPVGLIATGALLKNAEKAASS*
Ga0134121_116098911	3300010401	Terrestrial Soil	MGFSGIRAVILLGVLLGLIVAVTKFGFPGWFVPIGLLATAAILKKSEQRASS*
Ga0137314_11016232	3300011420	Soil	MGFSGIRAVIMGVVLVVLGISVFAFDLPGWLLPVGLIATGAVLKGSEESASQ*
Ga0137451_10471342	3300011438	Soil	MGFSGLRALIMVAVLVLLVVGVTTYDLPGWILPVGLIGAGVLMKAWESRASS*
Ga0137353_10028793	3300012157	Soil	MSFGGARALVLVAVLVVLVLAVTKLDLPGWIVPVGLIAAGAVLKGSTKSAAA*
Ga0137397_101953532	3300012685	Vadose Zone Soil	MGFSGLRAVIMVAVLVVLALGVTQYDLPGWLLPVGLIGTGLLLKAWESRASS*
Ga0157292_103427041	3300012900	Soil	MGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGS
Ga0157289_101860472	3300012903	Soil	SGLRAVIMVAVLVVLAVAVTKFGLPGWLLPVGLIATGVLLKGAEKSASQQ*
Ga0137396_110244182	3300012918	Vadose Zone Soil	MGFSGLRALIMVAVLVLLVFGVTTYDLPGWILPVGLIVAGVLMKAWESRASS*
Ga0137394_100353895	3300012922	Vadose Zone Soil	MGFSGIRALIMVAVLVLLVFGVTTYDLPGWILPVGLIGAGVLMKAWESRASS*
Ga0137394_103103762	3300012922	Vadose Zone Soil	MGFSGLRAVIMVAVLVVLALGVTQYDLPGWLLPVGLIGTGVLLKAWESRASS*
Ga0137410_106224942	3300012944	Vadose Zone Soil	MGFSGLRAVIMVAVLVVLALGVTRYDLPGWLLPVGLIGTGLLLKAWESRASS*
Ga0164303_112835851	3300012957	Soil	MSFGGIRAVIMIGALVVLGVAVFMFHFPGWLLPAGLVATGAV
Ga0126369_105575782	3300012971	Tropical Forest Soil	MSFSGVRAIILLAVLISLVLAVSKLDLPGWIVPVGLLVTGVVLKKSEKAASN*
Ga0126369_112655371	3300012971	Tropical Forest Soil	MGFSGLRAIIMIGVLIVLVVAVTKFDLPGWCLPVGLIGAGVLMKGWEKRASS*
Ga0164309_117584411	3300012984	Soil	MSIEKGGYTMSFSGLRAIILLAVLISLVLAVSRLGLPGWIVPVGLLVTGVVLKKSEKAASN*
Ga0163163_105864332	3300014325	Switchgrass Rhizosphere	MGFSGLRAVIMVAVLVVLILAVTKFNMPGWLLPVGLLATGAVLKNAEKSASQQ*
Ga0157380_100231154	3300014326	Switchgrass Rhizosphere	MGFSGMRAVIMVGMLVALGIGVFKFDLPGWIMPVGLIATGVVLKGSEERASQ*
Ga0157377_113587892	3300014745	Miscanthus Rhizosphere	MGFSGIRAVIMVVVFVLLLMAVTKMNMPGWILPVGLIVTGIILKSVNVTRTQTQ*
Ga0157376_102733672	3300014969	Miscanthus Rhizosphere	MEVTMGFSGIRAVILIAVLLALVIGVSKFDLPGWFVPVGLLATGAILRNAEQRASN*
Ga0173480_105126911	3300015200	Soil	ACSSKGDVMGFSGLRAVIMVAVLVVLAVAVTKFGLPGWLLPVGLIATGVLLKGAEKSASQQ*
Ga0137418_100510045	3300015241	Vadose Zone Soil	RALIMVAVLVLLVFGVTTYDLPGWILPVGLIGAGVLMKAWESRASS*
Ga0132258_100390811	3300015371	Arabidopsis Rhizosphere	MSFGGIRAVIMIGALVVLGVAVFMFHFPGWLLPAGLVATGAVLKGTESSTPQ*
Ga0132258_1006176510	3300015371	Arabidopsis Rhizosphere	MSFGGIRAVIMIGALVVLGVAVFMFNFPGWLLPAGLVATGAVLKGTESSTSQ*
Ga0132258_104866053	3300015371	Arabidopsis Rhizosphere	MGFSGLRAILMIAVLVVLVVAITKFDLPGWILPVGLLGTGALLKNSEKTASS*
Ga0132258_116196862	3300015371	Arabidopsis Rhizosphere	MGFSGARAIVMVAVLVVLVLAVTKFDLPGWLLPVGLLATGALLKNAENTASKAN*
Ga0132258_125118672	3300015371	Arabidopsis Rhizosphere	MGFSGIRAVILLAVLVVLVLGVTKFDLPGWLLPIGLVVSALVLKNSEQRASS*
Ga0132256_1000108921	3300015372	Arabidopsis Rhizosphere	MGFSGMRAVILLAVLVVLVLAVTKFDLPGWLLPIGLVVSALVLKNSEQRASS*
Ga0132255_1014902642	3300015374	Arabidopsis Rhizosphere	MGFSGMRALIMIGMLIALGIGVFKFGLPGWILPVGLLATGVVLKGSEE
Ga0132255_1045735532	3300015374	Arabidopsis Rhizosphere	MGFSGVRAIVMVAVLVVLVLAVTKFDLPGWLLPVGLLATGALLKN
Ga0132255_1050787011	3300015374	Arabidopsis Rhizosphere	MGFSGMRAVIMVVRLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ*
Ga0182041_103760781	3300016294	Soil	MSFSGLRAIILVAVLFSLVLAVSKLDLPGWIVPVGLLVTGVVLKKSEKAASN
Ga0182032_104015012	3300016357	Soil	MGFSGIRAVIMVEVLIILVVAVTKFDLPGWLLPVGLIASGALLKNAERAASGSN
Ga0134112_100173935	3300017656	Grasslands Soil	MGFSGVRAVILLGILVVLVVAVTKFDLPGWLLPVGLILSGAVLKRSEQRASS
Ga0163161_115704922	3300017792	Switchgrass Rhizosphere	FSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ
Ga0184604_100265102	3300018000	Groundwater Sediment	MGFFGLRALIMVAVLVLLVFGVTTYDLPGWILPVGLIGAGVLMKAWESRASS
Ga0184608_102702101	3300018028	Groundwater Sediment	GLRALIMVAVLVVLVLGVTTYDLPGWLLPVGLIGAGVLLKAWESRASS
Ga0184638_12459682	3300018052	Groundwater Sediment	MGFSGLRALIMVAVLVLLVVGVTTYDLPGWILPVGLIGAGVLMKAWESRASS
Ga0184628_100031527	3300018083	Groundwater Sediment	MGFSGLRAVIMVAVLVVLAVAVTKFGLPGWLLPVGLIATGVLLKGAEKSASQQ
Ga0184628_104264991	3300018083	Groundwater Sediment	KGDAMGFSGSRAIVMVAVLVVLVLAVTKFGLPGWLLPVGLIATGALLKGAEKAASN
Ga0190270_133163572	3300018469	Soil	MGFSGMRAVIMVGVLVVLGVAVFKFGLPGWILPVGLLATGLVLKGSEERAS
Ga0190271_124425922	3300018481	Soil	MGFSGMRAVIMIGVLVVLGVAVFKFDLPGWLLPVGLIATGVVLKGSEESASQ
Ga0173479_100043453	3300019362	Soil	MGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ
Ga0173479_103868761	3300019362	Soil	MGFSGLRAIIMVAVLIVLVLAVTKFNMPGWLLPVGLLATGAVLKSAEKSASQQR
Ga0193715_10018773	3300019878	Soil	MGFSGLRALIMVAVLVLLVFGVTTYDLPGWILPVGLIGAGVLMKAWESRASS
Ga0193723_10046422	3300019879	Soil	MGFSGLRAVIMVAVLVVLALGVTQYDLPGWLLPVGLIGTGVLLKAWESRASS
Ga0193723_10723312	3300019879	Soil	MGFSGLRALIMVAVLVVLVFGVTTYDLPGWILPVGLIGAGVLMKAWESRASS
Ga0193707_10025068	3300019881	Soil	MGFSGLRALIMAAVLVVLVFGVTTYDLPGWILPVGLIGAGVLMKAWESRASS
Ga0193755_10070944	3300020004	Soil	MGFSGLRAVIMVAVLVVLALGVTRYDLPGWLLPVGLIGTGVLLKAWESRASS
Ga0207653_100144391	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MGFSGLRAVIMVAVLVVLALGVTQYDLPGWLLPAGLIGTGVLLKAWESRASS
Ga0207680_100483713	3300025903	Switchgrass Rhizosphere	MGFSGMRALIMIGMLIALGIGVFKFGLPGWILPVGLLATGVVLKGSEEHASQ
Ga0207650_101980591	3300025925	Switchgrass Rhizosphere	MGFSGMRAVIMVAMLIALAIGVFKFDLPGWILPVGLLATGVVLKGSEERASQ
Ga0207659_100045554	3300025926	Miscanthus Rhizosphere	MGFSGMRAVIMVGVLVVLGVAVFKFGLPGWILPVGLLATGLVLKGSEERASQ
Ga0207659_104809912	3300025926	Miscanthus Rhizosphere	MGFSGLRAIIMVAVLVVLVLAVTKFNMPGWLLPVGLLATGAVLKGSEKSASQQR
Ga0207706_116706561	3300025933	Corn Rhizosphere	SGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ
Ga0207670_101325011	3300025936	Switchgrass Rhizosphere	ARMGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ
Ga0207689_116390311	3300025942	Miscanthus Rhizosphere	MGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERA
Ga0210102_10626681	3300025971	Natural And Restored Wetlands	MGFSGPRAIIMVAVLVVLVIGIGKYDLPGWILPVGLIGAGVLMKAWEKRASS
Ga0207658_113865061	3300025986	Switchgrass Rhizosphere	SSDKEARMGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ
Ga0209818_10223992	3300027637	Agricultural Soil	MGFSGARAVMMIAALVVLVVAVTKFDLPGWIIPVGLIVAGVLVRERRA
Ga0209971_11365531	3300027682	Arabidopsis Thaliana Rhizosphere	TLLSDSSDKEVSMGFSGIRAVIMVGVLVVLGIAVFKFDLPGWLLPVGLIATGAVLKGSEERASQ
Ga0209814_104467702	3300027873	Populus Rhizosphere	MGFSGLRALIMVAVLVVLVLGVTTYDLPGWLLPVGLIGAGVLLKAWESRASS
Ga0209486_100761243	3300027886	Agricultural Soil	MGFSGIRAVIMVAVLVVLGIAVFKFDLPGWLLPVGLIATGAVLKGSEEHASQ
Ga0268265_107689393	3300028380	Switchgrass Rhizosphere	KICPLHVPPLPSQSSDKEARMGFSGMRAVIMVGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ
Ga0268264_102951135	3300028381	Switchgrass Rhizosphere	MGFSGIRAVIMIAVLVGLLLAVTKFDLPGWILPVGLILCGVVLKNAEQRASS
Ga0307504_104375981	3300028792	Soil	MGFSGLRAVIMVAVLVVLGLGVTQYDLPGWLLPVGLIGTGVLLKAWESRASS
Ga0307296_101703221	3300028819	Soil	MGFSGLRALIMVAVLVLLVFGVTTYDLPGWILPVGLIGAGVLMKAWESRAFS
(restricted) Ga0255311_11215732	3300031150	Sandy Soil	MGFSGLRAVIMVAVLVLLAVGVTAYDLPGWILPVGLIGTGVLLKAWESRASS
Ga0307498_103336981	3300031170	Soil	GGGSVGFSGIRAIIMVAVLIVLLLGVIRFDLPGWLLPVGLIAAGVVVKAWEKRASS
Ga0307497_103516152	3300031226	Soil	MGFSGIRAVIMIGMLVALGIGVFKFDLPGWILPVGLIATGVVLKGSEERASQ
Ga0307408_1018954512	3300031548	Rhizosphere	LPSDSSDKEGKMGFSGMRAVIMVGVLVVLGVAVFKFDLPGWLLPVGLIATGVVLKGSEERASQ
Ga0307473_108151902	3300031820	Hardwood Forest Soil	MGFSGFRAIIMVAVLIVLVIAVTKFDLPGWLLPVGLLATGALLKGAEKSASKSSEV
Ga0307410_115775611	3300031852	Rhizosphere	MGFSGARAVLMIVALVVLVVLVTKFDLPGWIIPVGLILAGVLVKERRA
Ga0306923_119589881	3300031910	Soil	TVRVSGRKGDPMGFSGVRAVILIAVLIVLAVAVTKFDLPGWLLPVGLIASATLLKKTEKAASSSR
Ga0307470_100518323	3300032174	Hardwood Forest Soil	MGFSGLRALIMVAVLIVLVLGVTTYDLPGWLLPVGLIGTGVLLKAWESRASS
Ga0307471_1002988413	3300032180	Hardwood Forest Soil	MGFSGLRALIMVAVLVVLVLAVTTYDLPGWLLPVGLIGTGVLLKAWESRASS
Ga0307471_1015261992	3300032180	Hardwood Forest Soil	MSFGGFRAVIMIGALVVLSVAVFKFGFPGFLLPVGLVATALVLKATEGNTSQ
Ga0306920_1017417671	3300032261	Soil	MGFSGVRAVILIAVLIVLAVAVTKFDLPGWLLPVGLIASATLLKKTEKAASSSR
Ga0335085_119575371	3300032770	Soil	MGFSGLRAVIMAVVLVVLVLGVTKLDLPGWILPVGLIVAGIVLRGWEKRASS
Ga0334722_105409572	3300033233	Sediment	MGFSGLRAVIMVAVLVLLAVGVTTYDLPGWILPVGLIGTGVLLKAWESRASS
Ga0316626_115394181	3300033485	Soil	MGFSGIRAVILGALLVVLVLGVTKFDLPGWLLPVGLVVGGALLKGWEKRATA
Ga0247830_105359651	3300033551	Soil	MGFSGARAVMMIAALVVLVVAVTKFDLPGWIIPVGLIVAGVLVRERRATSGAQPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters