Metagenome / Metatranscriptome Family F041765

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041765
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	59 residues
Representative Sequence	MSNHKKIMEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Number of Associated Samples	116
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.48 %
% of genes near scaffold ends (potentially truncated)	34.59 %
% of genes from short scaffolds (< 2000 bps)	64.78 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (58.491 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (15.723 % of family members)
Environment Ontology (ENVO)	Unclassified (45.283 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (50.943 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.22% β-sheet: 0.00% Coil/Unstructured: 37.78%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF00383	dCMP_cyt_deam_1	37.74
PF03851	UvdE	13.21
PF00583	Acetyltransf_1	5.03
PF14279	HNH_5	4.40
PF00856	SET	2.52
PF00285	Citrate_synt	1.26
PF00924	MS_channel	1.26
PF03796	DnaB_C	0.63
PF02511	Thy1	0.63
PF00149	Metallophos	0.63
PF13637	Ank_4	0.63
PF13524	Glyco_trans_1_2	0.63
PF13420	Acetyltransf_4	0.63
PF01844	HNH	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	13.21
COG0372	Citrate synthase	Energy production and conversion [C]	1.26
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.26
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.26
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.63
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.63
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
All Organisms	root	All Organisms	41.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
cellular organisms	root	All Organisms → cellular organisms	41.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	28.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	28.93 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	3.14 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	28.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.14 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	28.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.14 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	28.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.14 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	28.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.14 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	28.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.14 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	28.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.14 %
Xanthomarina	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina	1.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.49 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	28.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.14 %
Xanthomarina gelatinilytica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	1.26 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035265000\|ErSWdraf_F5BXKTZ02HHONW	Not Available	566	Open in IMG/M
2199352004\|2199909059	Not Available	671	Open in IMG/M
3300000882\|FwDRAFT_10101014	Not Available	510	Open in IMG/M
3300002272\|B570J29579_106047	Not Available	595	Open in IMG/M
3300002408\|B570J29032_109523100	Not Available	835	Open in IMG/M
3300002835\|B570J40625_100051833	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5821	Open in IMG/M
3300002835\|B570J40625_100972117	Not Available	728	Open in IMG/M
3300003277\|JGI25908J49247_10004582	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4425	Open in IMG/M
3300003277\|JGI25908J49247_10021130	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1933	Open in IMG/M
3300003277\|JGI25908J49247_10053439	Not Available	1049	Open in IMG/M
3300003393\|JGI25909J50240_1059339	Not Available	784	Open in IMG/M
3300003394\|JGI25907J50239_1047199	Not Available	883	Open in IMG/M
3300004240\|Ga0007787_10099144	Not Available	1360	Open in IMG/M
3300004481\|Ga0069718_11431445	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300005527\|Ga0068876_10009692	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	6404	Open in IMG/M
3300005581\|Ga0049081_10018386	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300005582\|Ga0049080_10168191	Not Available	731	Open in IMG/M
3300005585\|Ga0049084_10140584	Not Available	847	Open in IMG/M
3300005662\|Ga0078894_10895443	Not Available	770	Open in IMG/M
3300005758\|Ga0078117_1063022	All Organisms → cellular organisms → Bacteria	2811	Open in IMG/M
3300005805\|Ga0079957_1001585	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	20779	Open in IMG/M
3300005805\|Ga0079957_1187330	Not Available	1011	Open in IMG/M
3300005941\|Ga0070743_10230674	Not Available	604	Open in IMG/M
3300005956\|Ga0073920_1025269	Not Available	746	Open in IMG/M
3300006007\|Ga0073917_1013591	Not Available	807	Open in IMG/M
3300006484\|Ga0070744_10065748	Not Available	1055	Open in IMG/M
3300006484\|Ga0070744_10119221	Not Available	761	Open in IMG/M
3300006802\|Ga0070749_10073891	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	2043	Open in IMG/M
3300006802\|Ga0070749_10155311	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300007169\|Ga0102976_1126934	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1864	Open in IMG/M
3300007363\|Ga0075458_10234855	Not Available	560	Open in IMG/M
3300007546\|Ga0102874_1148493	Not Available	729	Open in IMG/M
3300007549\|Ga0102879_1233858	Not Available	551	Open in IMG/M
3300007549\|Ga0102879_1248695	Not Available	532	Open in IMG/M
3300007551\|Ga0102881_1241815	Not Available	500	Open in IMG/M
3300007557\|Ga0102821_1161104	Not Available	571	Open in IMG/M
3300007622\|Ga0102863_1137317	Not Available	720	Open in IMG/M
3300007630\|Ga0102903_1040224	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1314	Open in IMG/M
3300007639\|Ga0102865_1151462	Not Available	694	Open in IMG/M
3300007651\|Ga0102900_1061842	Not Available	795	Open in IMG/M
3300007670\|Ga0102862_1071766	Not Available	854	Open in IMG/M
3300007708\|Ga0102859_1131930	Not Available	728	Open in IMG/M
3300007716\|Ga0102867_1197101	Not Available	553	Open in IMG/M
3300007864\|Ga0105749_1094840	Not Available	653	Open in IMG/M
3300007973\|Ga0105746_1107146	Not Available	921	Open in IMG/M
3300007973\|Ga0105746_1173767	Not Available	731	Open in IMG/M
3300007974\|Ga0105747_1013489	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2159	Open in IMG/M
3300007974\|Ga0105747_1136285	Not Available	786	Open in IMG/M
3300007992\|Ga0105748_10220004	Not Available	793	Open in IMG/M
3300008107\|Ga0114340_1007546	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5595	Open in IMG/M
3300008110\|Ga0114343_1070644	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1282	Open in IMG/M
3300008113\|Ga0114346_1222582	Not Available	731	Open in IMG/M
3300008120\|Ga0114355_1006812	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	6686	Open in IMG/M
3300008120\|Ga0114355_1199054	Not Available	648	Open in IMG/M
3300008261\|Ga0114336_1032612	All Organisms → cellular organisms → Bacteria	2864	Open in IMG/M
3300008267\|Ga0114364_1031597	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3572	Open in IMG/M
3300008448\|Ga0114876_1123946	Not Available	986	Open in IMG/M
3300008448\|Ga0114876_1223328	Not Available	612	Open in IMG/M
3300008962\|Ga0104242_1004515	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2583	Open in IMG/M
3300008962\|Ga0104242_1034044	Not Available	871	Open in IMG/M
3300008964\|Ga0102889_1031954	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1639	Open in IMG/M
3300008996\|Ga0102831_1006166	All Organisms → cellular organisms → Bacteria	4428	Open in IMG/M
3300009024\|Ga0102811_1119734	Not Available	985	Open in IMG/M
3300009050\|Ga0102909_1065621	Not Available	896	Open in IMG/M
3300009059\|Ga0102830_1005820	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4164	Open in IMG/M
3300009086\|Ga0102812_10403774	Not Available	744	Open in IMG/M
3300009161\|Ga0114966_10084463	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2163	Open in IMG/M
3300009165\|Ga0105102_10062474	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1667	Open in IMG/M
3300009185\|Ga0114971_10069235	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300010354\|Ga0129333_10000908	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	26127	Open in IMG/M
3300010354\|Ga0129333_10592077	Not Available	963	Open in IMG/M
3300010354\|Ga0129333_10668228	Not Available	896	Open in IMG/M
3300011335\|Ga0153698_1485	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	16401	Open in IMG/M
3300012763\|Ga0138289_1044392	Not Available	678	Open in IMG/M
3300013004\|Ga0164293_10018594	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5805	Open in IMG/M
3300013004\|Ga0164293_10560403	Not Available	747	Open in IMG/M
3300013004\|Ga0164293_10693136	Not Available	653	Open in IMG/M
3300013014\|Ga0164295_10808626	Not Available	725	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10007363	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	12639	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10659743	Not Available	595	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10874323	Not Available	552	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10046939	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3171	Open in IMG/M
3300017722\|Ga0181347_1020299	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300017722\|Ga0181347_1161719	Not Available	607	Open in IMG/M
3300017723\|Ga0181362_1118953	Not Available	518	Open in IMG/M
3300017766\|Ga0181343_1204371	Not Available	540	Open in IMG/M
3300017788\|Ga0169931_10089528	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3012	Open in IMG/M
3300017788\|Ga0169931_10321358	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1199	Open in IMG/M
3300019784\|Ga0181359_1014823	All Organisms → cellular organisms → Bacteria	2872	Open in IMG/M
3300019784\|Ga0181359_1153241	Not Available	788	Open in IMG/M
3300020074\|Ga0194113_10000333	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	60188	Open in IMG/M
3300020074\|Ga0194113_10065035	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3405	Open in IMG/M
3300020141\|Ga0211732_1169804	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300020141\|Ga0211732_1242741	Not Available	1286	Open in IMG/M
3300020141\|Ga0211732_1540056	Not Available	786	Open in IMG/M
3300020151\|Ga0211736_10367725	Not Available	992	Open in IMG/M
3300020159\|Ga0211734_10059708	Not Available	1304	Open in IMG/M
3300020159\|Ga0211734_10508034	Not Available	1202	Open in IMG/M
3300020159\|Ga0211734_10935860	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3710	Open in IMG/M
3300020159\|Ga0211734_11250135	Not Available	790	Open in IMG/M
3300020161\|Ga0211726_10126169	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	1924	Open in IMG/M
3300020161\|Ga0211726_10201747	Not Available	668	Open in IMG/M
3300020480\|Ga0208201_100002	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	51343	Open in IMG/M
3300020506\|Ga0208091_1010831	Not Available	1133	Open in IMG/M
3300020506\|Ga0208091_1012220	Not Available	1054	Open in IMG/M
3300020536\|Ga0207939_1028225	Not Available	746	Open in IMG/M
3300021956\|Ga0213922_1029387	Not Available	1329	Open in IMG/M
3300021960\|Ga0222715_10015892	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5778	Open in IMG/M
3300021961\|Ga0222714_10010169	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	8152	Open in IMG/M
3300021961\|Ga0222714_10024650	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4603	Open in IMG/M
3300021961\|Ga0222714_10078275	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2165	Open in IMG/M
3300021961\|Ga0222714_10088236	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1999	Open in IMG/M
3300021961\|Ga0222714_10094763	Not Available	1906	Open in IMG/M
3300021961\|Ga0222714_10289856	Not Available	902	Open in IMG/M
3300021962\|Ga0222713_10111394	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1944	Open in IMG/M
3300021962\|Ga0222713_10358140	Not Available	910	Open in IMG/M
3300021962\|Ga0222713_10463866	Not Available	765	Open in IMG/M
3300021962\|Ga0222713_10669347	Not Available	596	Open in IMG/M
3300021963\|Ga0222712_10001914	Not Available	24811	Open in IMG/M
3300021963\|Ga0222712_10578991	Not Available	651	Open in IMG/M
3300022407\|Ga0181351_1041520	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1940	Open in IMG/M
3300024346\|Ga0244775_10492920	Not Available	1001	Open in IMG/M
3300024507\|Ga0255176_1051167	Not Available	758	Open in IMG/M
3300024509\|Ga0255175_1018650	Not Available	1412	Open in IMG/M
3300027193\|Ga0208800_1018379	Not Available	917	Open in IMG/M
3300027211\|Ga0208307_1044744	Not Available	677	Open in IMG/M
3300027220\|Ga0208927_1008439	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2114	Open in IMG/M
3300027241\|Ga0208805_1062178	Not Available	646	Open in IMG/M
3300027304\|Ga0208810_1089266	Not Available	633	Open in IMG/M
3300027418\|Ga0208022_1002376	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5066	Open in IMG/M
3300027659\|Ga0208975_1006846	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4099	Open in IMG/M
(restricted) 3300027730\|Ga0247833_1040304	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2724	Open in IMG/M
3300027733\|Ga0209297_1003334	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	8586	Open in IMG/M
3300027743\|Ga0209593_10310511	Not Available	540	Open in IMG/M
3300027753\|Ga0208305_10036635	Not Available	1937	Open in IMG/M
3300027754\|Ga0209596_1022452	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3742	Open in IMG/M
3300027754\|Ga0209596_1181233	Not Available	912	Open in IMG/M
3300027769\|Ga0209770_10039172	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2041	Open in IMG/M
3300027969\|Ga0209191_1044506	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2057	Open in IMG/M
(restricted) 3300027970\|Ga0247837_1284559	Not Available	632	Open in IMG/M
3300029930\|Ga0119944_1000395	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	7637	Open in IMG/M
3300029930\|Ga0119944_1003442	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300031746\|Ga0315293_10385224	Not Available	1106	Open in IMG/M
3300031758\|Ga0315907_10026328	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5309	Open in IMG/M
3300031758\|Ga0315907_10193765	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300031758\|Ga0315907_10277703	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1382	Open in IMG/M
3300031784\|Ga0315899_10066881	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3729	Open in IMG/M
3300031784\|Ga0315899_11378788	Not Available	598	Open in IMG/M
3300031787\|Ga0315900_10015146	Not Available	9284	Open in IMG/M
3300031963\|Ga0315901_10063757	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3539	Open in IMG/M
3300033816\|Ga0334980_0016339	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300033816\|Ga0334980_0023647	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2634	Open in IMG/M
3300033994\|Ga0334996_0008322	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	6959	Open in IMG/M
3300034021\|Ga0335004_0535843	Not Available	633	Open in IMG/M
3300034102\|Ga0335029_0357074	Not Available	899	Open in IMG/M
3300034106\|Ga0335036_0000667	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	31342	Open in IMG/M
3300034284\|Ga0335013_0829691	Not Available	514	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.74%
Terrestrial	Environmental → Terrestrial	1.26%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	64.78%
Marine	Environmental → Aquatic → Marine	33.96%
Soil	Environmental → Terrestrial → Soil	1.26%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	35.22%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.69%
Coastal	Environmental → Aquatic → Marine → Coastal	7.55%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.89%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.26%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.26%
River	Environmental → Aquatic → Freshwater → River	1.26%
Sand	Environmental → Terrestrial → Soil → Sand	1.26%
Creek	Environmental → Aquatic → Freshwater → Creek	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.70%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	15.72%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.47%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.69%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.55%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.40%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.40%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.26%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	15.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.06%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.06%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	8.18%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.55%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.66%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.40%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.40%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.40%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	3.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.14%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.52%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.52%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.89%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.89%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.26%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.26%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	1.26%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.26%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.63%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.63%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.63%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.63%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035265000	Freshwater microbial communities from Swedish Lakes - surface of Lake Erken	Environmental	Open in IMG/M
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300002272	Freshwater microbial communities from Lake Mendota, WI - 27JUL2010 deep hole epilimnion ns	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300005956	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_23-Sept-14	Environmental	Open in IMG/M
3300006007	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T3_23-Sept-14	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007169	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007651	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-3	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007864	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009050	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300011335	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman	Environmental	Open in IMG/M
3300012763	Freshwater microbial communities from Lake Simoncouche, Canada - S_140108_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020480	Freshwater microbial communities from Lake Mendota, WI - 16JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024507	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8d	Environmental	Open in IMG/M
3300024509	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8d	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027211	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 (SPAdes)	Environmental	Open in IMG/M
3300027220	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02 (SPAdes)	Environmental	Open in IMG/M
3300027241	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02 (SPAdes)	Environmental	Open in IMG/M
3300027304	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02 (SPAdes)	Environmental	Open in IMG/M
3300027418	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027730 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8m	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027970 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14.5m	Environmental	Open in IMG/M
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ErSWdraft_11529290	2035265000	Freshwater	MLNHKKIIEDSASFFNKEVDKTIKKAANAKTQHKRIKHIKELMALKN
2200091390	2199352004	Freshwater	MSNHKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF
FwDRAFT_101010142	3300000882	Freshwater And Marine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*NHLLTA
B570J29579_1060472	3300002272	Freshwater	MLNHKQIMEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDEL
B570J29032_1095231002	3300002408	Freshwater	MSNHKKMIEDSAAFFNKEVDKVILKVTTAKTEKTRSKYLKQLMALKNRLRLEVKMIDELGNF*
B570J40625_1000518337	3300002835	Freshwater	MLNHKQIMEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDELGNF*
B570J40625_1009721172	3300002835	Freshwater	MIEDSAAFFNKEVDKVILKVTTAKTEKTRSKYLKQLMALKNRLRLEVKMIDELGNF*
JGI25908J49247_100045824	3300003277	Freshwater Lake	MSNHKKIAEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
JGI25908J49247_100211301	3300003277	Freshwater Lake	MFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNR
JGI25908J49247_100534393	3300003277	Freshwater Lake	YMSNHKKIAEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
JGI25909J50240_10593392	3300003393	Freshwater Lake	MFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMXEDLDNF*
JGI25907J50239_10471992	3300003394	Freshwater Lake	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0007787_100991442	3300004240	Freshwater Lake	MLNHKQLKEDSAAFFNKEVDKIIHKINNAKTDKLRIKYIKQMIALRNRLTLEVKMLDNLQ
Ga0069718_114314455	3300004481	Sediment	MEDSAAFFNKEVDKVILKVTTAKTEKTRSKYLKQMLALRNRLSLEVKMLDDLGNF*
Ga0068876_1000969210	3300005527	Freshwater Lake	MINHKKILEDSASFFNNEVDKVISKISSTKSEKQREKYLKQILALRNRLALEIKMLDKHSDF*
Ga0049081_100183863	3300005581	Freshwater Lentic	MSNHKKIVEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYVKQMIALKNRLSLEVKMLEDLDNF*
Ga0049080_101681913	3300005582	Freshwater Lentic	MLNHKKIIEDSAAFFNQEVDKVILKITTAKTEKARSKYLKQLMALKNRL
Ga0049084_101405842	3300005585	Freshwater Lentic	MSNHKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0078894_108954433	3300005662	Freshwater Lake	FFNKEVDKIIHKINNAKTDKLRIKYIKQMIALRNRLTLEVKMLDSLE*
Ga0078117_10630224	3300005758	Lake Water	MINHKKLLEDSASFFNNEVDKVISKISSTKSEKQREKYLKQMLALRNRLALEIKMLDNHSDF*
Ga0079957_10015851	3300005805	Lake	MLNHKKIMEDSAAFFNKEVDKVILKVTKAKTEKTRSKYLKQMLALRNRLTLEVKMLDDLGNF*
Ga0079957_11873301	3300005805	Lake	MEDSAAFFNKEVDKVILKVTKAKTDKARSKYLKQMLALRNRLSLEVKMLDDLGNF*
Ga0070743_102306742	3300005941	Estuarine	MFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0073920_10252692	3300005956	Sand	NHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0073917_10135911	3300006007	Sand	AEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0070744_100657483	3300006484	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNL*
Ga0070744_101192213	3300006484	Estuarine	KKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0070749_100738912	3300006802	Aqueous	MINHKKLLEDSASFFNNEVDKVISKISSTKSEKQREKYLKQMLALRNRLALEIKMLDDHSDF*
Ga0070749_101553112	3300006802	Aqueous	MLNHKQIMEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLAVKMIDELGNF*
Ga0102976_11269345	3300007169	Freshwater Lake	MLNHKKIMEDSASFFNSEVDKVILSITNAKTEKQRNKCIKQMIALKQRLALEIKMLDGME
Ga0075458_102348551	3300007363	Aqueous	MLNHKQIMEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDDLGNF*
Ga0102874_11484932	3300007546	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMVALKNRLSLEVKMLEDLDNF*
Ga0102879_12338582	3300007549	Estuarine	MSNHKKIVEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0102879_12486952	3300007549	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEV
Ga0102881_12418152	3300007551	Estuarine	YMSNHKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0102821_11611041	3300007557	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYVKQMIALKNRLSLEVKMLEDLDNF*
Ga0102863_11373171	3300007622	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLE
Ga0102903_10402241	3300007630	Estuarine	MSNNKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0102865_11514621	3300007639	Estuarine	SAAFFNKEVDKVILKVTKAKTEKTRSKYLKQMLALKNRLNLEVKMLDDLGNF*
Ga0102900_10618421	3300007651	Estuarine	KLYMSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0102862_10717661	3300007670	Estuarine	DSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0102859_11319302	3300007708	Estuarine	KLYMSNHKKITEDSAEIFNKEVDKIIYKVTTTKSTKQRNKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0102867_11971012	3300007716	Estuarine	DSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMVALKNRLSLEVKMLEDLDNF*
Ga0105749_10948401	3300007864	Estuary Water	HKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0105746_11071461	3300007973	Estuary Water	MFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLD
Ga0105746_11737671	3300007973	Estuary Water	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLD
Ga0105747_10134895	3300007974	Estuary Water	MFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVK
Ga0105747_11362852	3300007974	Estuary Water	MLNHKQIIEDSAAFFNKEVDKIIYKVTNAKNDKERTKYLKQLMALKNRLTLEVKMIDELGNF*
Ga0105748_102200042	3300007992	Estuary Water	MLNHKQIMEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMI
Ga0114340_10075469	3300008107	Freshwater, Plankton	MLNHKKIIEDSAAFFNQEVDKVILKITTAKTEKARSKYLKQLMALKNRLSLEVKMIDELGNF*
Ga0114343_10706441	3300008110	Freshwater, Plankton	MLNHKKIMEDSAAFFNKEVDKVILKVTTAKTEKTRSKYLKQMAALKNRLILEVKMLDDLGNF*
Ga0114346_12225822	3300008113	Freshwater, Plankton	MLNHKQIIEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDELGNF*
Ga0114355_10068127	3300008120	Freshwater, Plankton	MLNHKQLKEDSAAFFNKEVDKIIHKINNAKTDKLRIKYITQMIALRNRLTLEVKMLDNLQ
Ga0114355_11990541	3300008120	Freshwater, Plankton	MEDSAAFFNSEVDKVIVSVSNAKTQKQRNKYLKQMLALRQRLALEIKMLDEMQ*
Ga0114336_10326128	3300008261	Freshwater, Plankton	EDSAAFFNKEVDKIIYKVTNAKNDKERTKYLKQLMALKNRLTLEVKMIDELGNF*
Ga0114364_10315978	3300008267	Freshwater, Plankton	MLNHKKIMEDSAAFFNSEVDKVIINVTNAKTGKQRNKYLKQMLALRQRLALEIKMLDSME
Ga0114876_11239463	3300008448	Freshwater Lake	LNHKQLKEDSAAFFNKEVDKIIHKINNAKTDKLRIKYIKQMIALKNRLSLEVKMLDSLE*
Ga0114876_12233282	3300008448	Freshwater Lake	MLNHKQIIEDSAAFFNKEVDKIIYKVKNAKNEKERAKYLKQLMAIKNRLTLEVKMIDELGNF*
Ga0104242_10045156	3300008962	Freshwater	MSNHKKIVEDSAAFFNKEVDKVILKTTKAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0104242_10340442	3300008962	Freshwater	MLNHKQIMEDSAAFFNKEVDKIIYKMNNAKTDKSRIKYIKQMIALKNRLTLEVKMLDSLE
Ga0102889_10319545	3300008964	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSL
Ga0102831_100616610	3300008996	Estuarine	EFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0102811_11197342	3300009024	Estuarine	MSNRKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0102909_10656213	3300009050	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDL
Ga0102830_100582010	3300009059	Estuarine	MFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKML
Ga0102812_104037742	3300009086	Estuarine	MFNHKKITEDSAEFFNKEVDKIIYQVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0114966_100844633	3300009161	Freshwater Lake	MFNHKKITEDSAEFFNKEVDKIIHKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF*
Ga0114975_100864891	3300009164	Freshwater Lake	NFFNKEVDKVIEKATNAKTQKKRMKHVKELIALKNRLALEVKMLNEME*
Ga0105102_100624745	3300009165	Freshwater Sediment	MLNHKKIMEDSAAFFNQEVDKVIYKVVNAKNDKERTKYLKQLMALKNRLTLEVKMIDELGNF*
Ga0114971_100692353	3300009185	Freshwater Lake	MSNHKKIVEDSAAFFNKEVDKVIFKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0129333_1000090813	3300010354	Freshwater To Marine Saline Gradient	MPSHKQIMEDSAAFFNKEVDKIILKISNAKTEKTRLKYLKQMIALRNRLTLEVKMLDDLGNF*
Ga0129333_105920771	3300010354	Freshwater To Marine Saline Gradient	MINHKKILEDSASFFNNEVDKVISKISSTKSEKQREKYLKQMLALRNRLALEIKMLDDHSDF*
Ga0129333_106682281	3300010354	Freshwater To Marine Saline Gradient	MLNHKQLKEDSATFFNKEVDKIIHKVINAKTDKLRIKYIKQMIALRNRLT
Ga0153698_14853	3300011335	Freshwater	MLNHKRIMEDSAAFFNKEVDKVILKVATAKTEKSRLKYLKQMLALRNRLSLEVKMLNDLDNF*
Ga0138289_10443921	3300012763	Freshwater Lake	KIFYKLYMSNHKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF*
Ga0164293_100185945	3300013004	Freshwater	MLNHKKIIEDSAAFFNKEVDKIIYKVTNAKNDKERTKYLKQLMALKNRLTLEVKMIDELGNF*
Ga0164293_105604032	3300013004	Freshwater	MEDSAAFFNKEVDKIIYKVNNAKTDKLRIKYIKQMIALRNRLTLEVKMLDALE*
Ga0164293_106931362	3300013004	Freshwater	MLNHKQIMEDSAAFFNKEVDKVIYKVVNAKNDKERTKYLKQLMALKNRLSLEVKMIDELGNF*
Ga0164295_108086262	3300013014	Freshwater	MSNHKKIVEDSAAFFNKEVDKVILKTTTAKTEKSRLKYLKQLIALKNRIAL
(restricted) Ga0172367_100073632	3300013126	Freshwater	MINHKKILEDSADFFNKEVDKVITNISTAKNAKQRNKYLKQMFALKNRLQLEVKMLDDHTDF*
(restricted) Ga0172365_106597431	3300013127	Sediment	MINHKKILEDSADFFNKEVDKVIANISTAKNVKQRDKYLKQMFALKNRLQLEVKMLEDRTDF*
(restricted) Ga0172364_108743231	3300013129	Sediment	ISYNLFMINHKKILEDSADFFNKEVDKVIANISTAKNVKQRDKYLKQMFALKNRLQLEMKMLEDRTDF*
(restricted) Ga0172363_100469392	3300013130	Sediment	MINHKKILEDSADFFNKEVDKVIANISTAKNVKQRDKYLKQMFALKNRLQLEMKMLEDRTDF*
Ga0181347_10202991	3300017722	Freshwater Lake	MSNHKKIAEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLD
Ga0181347_11617191	3300017722	Freshwater Lake	MSNRKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLD
Ga0181362_11189531	3300017723	Freshwater Lake	MLNHKKIMEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF
Ga0181343_12043712	3300017766	Freshwater Lake	MEDSAAFFNQEVDKVILKVTTAKTEKARSKYLKQLMALKNRLSLEVKMIDELGNF
Ga0169931_100895286	3300017788	Freshwater	MINHKKILEDSADFFNKEVDKVITNISTAKNVKQRDKYLKQMFALKNRLQLEVKMLEDRTDF
Ga0169931_103213583	3300017788	Freshwater	MINHKKILEDSADFFNKEVDKVITNISTAKNAKQRNKYLKQMFALKNRLQLEVKMLDDHTDF
Ga0181359_10148232	3300019784	Freshwater Lake	MSNRKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0181359_11532412	3300019784	Freshwater Lake	MSNHKKIAEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0194113_1000033348	3300020074	Freshwater Lake	MINHKKILEDSADFFNKEVDKVITNISTAKNAKQRNKYLKQIFALKNRLQLEVKMLDDHSNF
Ga0194113_100650356	3300020074	Freshwater Lake	MINHKKILEDSADFFNKEVDKLITSISTAKNAKQRNKYLKQMFALKNRLQLEVKMLDDHTNF
Ga0211732_11698041	3300020141	Freshwater	IMEDSAAFFNKEVDKVILKVTTAKTEKSRLKYLKQMLALRNRLSLEVKMLNDLDNF
Ga0211732_12427411	3300020141	Freshwater	IMEDSAAFFNKEVDKVILKVTTAKTEKSRLKYLKQMLALKNRLSLEVKMLNDLDNF
Ga0211732_15400562	3300020141	Freshwater	MLNHKKIIEDSASFFNKEVDKTIKKAANAKTQHKRIKHIKELMALKNRLILEVKMLNEME
Ga0211736_103677251	3300020151	Freshwater	MSNHKRIMEDSAAFFNKEVDKVILKVTTAKTEKSRSKYLRQMLALRNRLSLEVKMLNDLDNF
Ga0211734_100597081	3300020159	Freshwater	MEDSAAFFNKEVDKVILKVTTAKTEKSRSKYLRQMLALRNRLSLEVKMLNDLDNF
Ga0211734_105080342	3300020159	Freshwater	MLNHKKIIEDSASFFNKEVDKTIKKAANAKTQHKRIKHIKELMALKNRLILEVKMLDEME
Ga0211734_109358603	3300020159	Freshwater	MLNHKKIMEDSAAFFNQEVDKVILKVTTAKTEKTRSKYLKQLMALKNRLSLEVKMLDNLGNF
Ga0211734_112501351	3300020159	Freshwater	KIKIFYNLFMLNHKKIMEDSASFFNKEVDKVIDKVSNAKTDKMRTKYLKQMLALRQRLALEIKMLDGME
Ga0211726_101261694	3300020161	Freshwater	AAFFNKEVDKVILKVTTAKTEKSRLKYLKQMLALRNRLSLEVKMLNDLDNF
Ga0211726_102017472	3300020161	Freshwater	MLNHKKIMEDSASFFNKEVDKVIDKVSNAKTDKMRTKYLKQMLALRQRLALEIKMLDGME
Ga0208201_10000260	3300020480	Freshwater	MLNHKQIMEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDELGNF
Ga0208091_10108313	3300020506	Freshwater	MLNHKQIMEDSAAFFNKEVDKIIYKVNNAKTDKLRIKYIKQMIALRNRLTLEVKMLDALE
Ga0208091_10122203	3300020506	Freshwater	MLNHKQIIEDSAAFFNKEVDKIIYKVTNAKNDKERTKYLKQLMALKNRLTLEVKMIDELGNF
Ga0207939_10282253	3300020536	Freshwater	MLNHKQIMEDSAAFFNKEVDKIIYKVNNAKTDKLRIKYIKQMIALRNRLTLEVKMLDA
Ga0213922_10293872	3300021956	Freshwater	MLNHKQIMEDSAAFFNKEVDKIIYKVNNAKTDKSRIKYIKQMIALRNRLTLEVKMLDTLE
Ga0222715_1001589211	3300021960	Estuarine Water	MLNHKKIMEDSASFFNSEVDKVILSITNAKTEKRRNKCIKQMIALKQRLALEIKMLDKME
Ga0222714_100101698	3300021961	Estuarine Water	MLNHKQIMEDSAAFFNKEVDKIIYKMNNAKTDKSRIKYIKQMIALKNRLSLEVKMLDSLE
Ga0222714_100246507	3300021961	Estuarine Water	MLNHKQIIEDSAAFFNKEVDKIIYKVTNAKNEKQRAKYLKQLMALKNRLTLEVKMIDELGNF
Ga0222714_100782755	3300021961	Estuarine Water	MLNHKQIMEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDDLGNF
Ga0222714_100882364	3300021961	Estuarine Water	MLNHKKIMEDSAAFFNSEVDKVIVSVSNAKTQKQRNKYLKQMLALRQRLALEIKMLDEMQ
Ga0222714_100947633	3300021961	Estuarine Water	MLNHKKIMEDSAAFFNKEVDKVILKVTKAKTEKTRSKYLKQMLALRNRLTLEVKMLDDLGNF
Ga0222714_102898562	3300021961	Estuarine Water	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0222713_101113944	3300021962	Estuarine Water	MLNHKKIMEDSAAFFNKEVDKVILKVTKAKTEKTRSKYLKQMLALRNRLSLEVKMLDDLGNF
Ga0222713_103581403	3300021962	Estuarine Water	MLNHKKIMEDSAAFFNKEVDKVILKVTTAKTEKTRSKYLKQLMALKNRLSLEVKMIDELGNF
Ga0222713_104638663	3300021962	Estuarine Water	MFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSL
Ga0222713_106693472	3300021962	Estuarine Water	YMLNHKKIMEDSAAFFNKEVDKVILKVTKAKTDKARSKYLKQMLALRNRLSLEVKMLDDLGNF
Ga0222712_1000191428	3300021963	Estuarine Water	MEDSAAFFNKEVDKIIYKMNNAKTDKSRIKYIKQMIALKNRLSLEVKMLDSLE
Ga0222712_105789911	3300021963	Estuarine Water	MSNHKKIMEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0181351_10415205	3300022407	Freshwater Lake	MSNRKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLS
Ga0244775_104929203	3300024346	Estuarine	SAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0255176_10511672	3300024507	Freshwater	MLNHKQIMEDSAAFFNKEVDKIIYKVNNAKTDKSRIKYIKQMIALRNRLTLEVKMLDSLE
Ga0255175_10186503	3300024509	Freshwater	MLNHKQIMEDSAAFFNKEVDKVIHKMNNAKTDKLRIKYIKQMIALRNRLTLEVKMLDSLE
Ga0208800_10183791	3300027193	Estuarine	ITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0208307_10447441	3300027211	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKML
Ga0208927_10084393	3300027220	Estuarine	MSNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMVALKNRLSLEVKMLEDLDNF
Ga0208805_10621782	3300027241	Estuarine	MSNHKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKML
Ga0208810_10892661	3300027304	Estuarine	MSNHKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRI
Ga0208022_100237612	3300027418	Estuarine	MFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLE
Ga0208975_10068469	3300027659	Freshwater Lentic	MSNHKKIVEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYVKQMIALKNRLSLEVKMLEDLDNF
(restricted) Ga0247833_10403044	3300027730	Freshwater	MEDSAAFFNKEVDKVILKVTTAKTEKTRSKYLKQMLALRNRLSLEVKMLNDLDNF
Ga0209297_10033349	3300027733	Freshwater Lake	MLNHKKITEDSANFFNKEVDKVIEKATNAKTQKKRMKHVKELIALKNRLALEVKMLNEME
Ga0209593_103105111	3300027743	Freshwater Sediment	MLNHKKIMEDSAAFFNQEVDKVIYKVVNAKNDKERTKYLKQLMALKNRLTLEVKMIDELGNF
Ga0208305_100366351	3300027753	Estuarine	FMFNHKKITEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0209596_10224527	3300027754	Freshwater Lake	MSNHKKIVEDSAAFFNKEVDKVIFKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLGDLDNF
Ga0209596_11812332	3300027754	Freshwater Lake	MSNHKKIVEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0209770_100391724	3300027769	Freshwater Lake	MLNHKQLKEDSATFFNKEVDKIIHKVINAKTDKLRIKYIKQMIALRNRLTLEVKMLDSLE
Ga0209191_10445061	3300027969	Freshwater Lake	MSNHKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLE
Ga0209191_12648301	3300027969	Freshwater Lake	NFFNKEVDKVIEKATNAKTQKKRMKHVKELIALKNRLALEVKMLNEME
(restricted) Ga0247837_12845591	3300027970	Freshwater	MLNHKKIMEDSAAFFNKEVDKVILKVTTAKTEKTRSKYLKQMLALRNRLSLEVKMLNDLDNF
Ga0119944_10003957	3300029930	Aquatic	MLNHKKIMEDSAEFFNKEVDKVIHNMTTAKTTKQRKKYIKQMIALKNRLSLEVRMLDDHSDF
Ga0119944_10034426	3300029930	Aquatic	MFNHKQIMEESAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDELGNF
Ga0315293_103852242	3300031746	Sediment	MEDSAEFFNKEVDKIIYKVTTTKSTKQRIKYIKQMIALKNRLSLEVKMLEDLDNF
Ga0315907_100263284	3300031758	Freshwater	MLNHKKIIEDSAAFFNQEVDKVILKITTAKTEKARSKYLKQLMALKNRLSLEVKMIDELGNF
Ga0315907_101937654	3300031758	Freshwater	FFNKEVDKIIYKVTNAKNDKERTKYLKQLMALKNRLTLEVKMIDELGNF
Ga0315907_102777031	3300031758	Freshwater	MLNHKQLKEDSATFFNKEVDKIIHKVINAKTDKLRIKYIKQMIALRNRLTLEVKMLDNLQ
Ga0315899_100668812	3300031784	Freshwater	MLNHKQIIEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDELGNF
Ga0315899_113787881	3300031784	Freshwater	MLNHKQIIEDSAAFFNKEVDKIIYKVTNAKNEKERAKYLKQLMAIKNRLTLEVKMIDELGNF
Ga0315900_1001514619	3300031787	Freshwater	MINHKKILEDSASFFNNEVDKVISKISSTKSEKQRDKYLKQILALRNRLALEIKMLDKHSDF
Ga0315901_100637577	3300031963	Freshwater	MLNHKQLKEDSATFFNKEVDKIIHKINNAKTDKLRIKYIKQMIALRNRLTLEVKMLDNLQ
Ga0334980_0016339_2545_2733	3300033816	Freshwater	MSNHKKMIEDSAAFFNKEVDKVILKVTTAKTEKTRSKYLKQLMALKNRLRLEVKMIDELGNF
Ga0334980_0023647_1057_1218	3300033816	Freshwater	MEDSAAFFNKEVDKIIYKVNNAKTDKLRIKYIKQMIALRNRLTLEVKMLDALE
Ga0334996_0008322_5746_5913	3300033994	Freshwater	MEDSAAFFNKEVDKVIYKITNAKNDKQRTKYLKQLMALKNRLTLEVKMIDELGNF
Ga0335004_0535843_3_173	3300034021	Freshwater	MSNHKKIVEDSAAFFNKEVDKVILKTTRAKTEKSRLKYLKQLIALKNRITLEVKMLG
Ga0335029_0357074_575_763	3300034102	Freshwater	MLNHKKIMEDSAAFFNQEVDKVILKVTTAKTEKTRSKYLKQLMALKNRLSLEVKMIDELGNF
Ga0335036_0000667_27022_27210	3300034106	Freshwater	MLNHKKIMEDSAAFFNKEVDKIILKVTTAKTEKTRSKYLKQLMALKNRLSLEVKMIDELGNF
Ga0335013_0829691_2_154	3300034284	Freshwater	MLNHKKIIEDSAAFFNQEVDKVILKITTAKTEKARSKYLKQLMALKNRLSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters