Metagenome / Metatranscriptome Family F041628

Basic Information
Family ID	F041628
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	75 residues
Representative Sequence	VAHVPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Number of Associated Samples	142
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.35 %
% of genes near scaffold ends (potentially truncated)	45.91 %
% of genes from short scaffolds (< 2000 bps)	44.65 %
Associated GOLD sequencing projects	135
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Most Common Taxonomy
Group	Unclassified (53.459 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.044 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.170 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.77% β-sheet: 22.34% Coil/Unstructured: 64.89%
Feature Viewer

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Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF06823	DUF1236	27.04
PF05175	MTS	25.16
PF03466	LysR_substrate	6.92
PF02798	GST_N	3.14
PF00313	CSD	1.26
PF03401	TctC	0.63
PF03572	Peptidase_S41	0.63
PF02562	PhoH	0.63
PF01557	FAA_hydrolase	0.63
PF11794	HpaB_N	0.63
PF12697	Abhydrolase_6	0.63
PF13011	LZ_Tnp_IS481	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.63
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.63

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
All Organisms	root	All Organisms	46.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
cellular organisms	root	All Organisms → cellular organisms	46.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.26 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.63 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
Rhizobiales bacterium 32-66-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 32-66-8	0.63 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
Rhizobiales bacterium 32-66-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 32-66-8	0.63 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.46 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
Rhizobiales bacterium 32-66-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 32-66-8	0.63 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig94428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300001991\|JGI24743J22301_10012454	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300004157\|Ga0062590_100335961	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300004643\|Ga0062591_101321690	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300005165\|Ga0066869_10047831	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005328\|Ga0070676_11095465	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005334\|Ga0068869_100662969	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300005339\|Ga0070660_100974347	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300005340\|Ga0070689_100484361	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300005356\|Ga0070674_101470952	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005364\|Ga0070673_100439918	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300005366\|Ga0070659_100419564	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300005367\|Ga0070667_102148908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	526	Open in IMG/M
3300005456\|Ga0070678_100184695	All Organisms → cellular organisms → Bacteria → Proteobacteria	1710	Open in IMG/M
3300005518\|Ga0070699_100927703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300005543\|Ga0070672_100137004	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300005615\|Ga0070702_100934231	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300005616\|Ga0068852_101525621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300005834\|Ga0068851_10923192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	548	Open in IMG/M
3300006844\|Ga0075428_101679774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	663	Open in IMG/M
3300009101\|Ga0105247_10970845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	661	Open in IMG/M
3300009148\|Ga0105243_11414972	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300010397\|Ga0134124_11018889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300010400\|Ga0134122_13384892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300011119\|Ga0105246_11599394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300012204\|Ga0137374_10776602	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300012469\|Ga0150984_100146389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1041	Open in IMG/M
3300012469\|Ga0150984_103797550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300012908\|Ga0157286_10338543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300012957\|Ga0164303_10091752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1480	Open in IMG/M
3300012960\|Ga0164301_10135863	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300012961\|Ga0164302_10943904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300012985\|Ga0164308_10589837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300013296\|Ga0157374_10029861	All Organisms → cellular organisms → Bacteria → Proteobacteria	4944	Open in IMG/M
3300013296\|Ga0157374_10922507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M
3300013297\|Ga0157378_12920355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300014326\|Ga0157380_11149572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300014969\|Ga0157376_10132812	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300017792\|Ga0163161_12102261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300018074\|Ga0184640_10361083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300018429\|Ga0190272_12315941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300019356\|Ga0173481_10151238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	958	Open in IMG/M
3300020001\|Ga0193731_1161701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300020078\|Ga0206352_10931161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300021078\|Ga0210381_10050644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1243	Open in IMG/M
3300025931\|Ga0207644_10827876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300026023\|Ga0207677_11782135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300026067\|Ga0207678_11060297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300026121\|Ga0207683_10307613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1450	Open in IMG/M
3300027907\|Ga0207428_10657240	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
3300028381\|Ga0268264_11355923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300028744\|Ga0307318_10090249	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300028754\|Ga0307297_10162901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300028771\|Ga0307320_10473895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300028778\|Ga0307288_10040770	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300028778\|Ga0307288_10093787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300028791\|Ga0307290_10282534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300028796\|Ga0307287_10128641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	960	Open in IMG/M
3300028824\|Ga0307310_10118541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300028828\|Ga0307312_10160143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1432	Open in IMG/M
3300028828\|Ga0307312_10317900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1015	Open in IMG/M
3300028872\|Ga0307314_10088063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	833	Open in IMG/M
3300028880\|Ga0307300_10074105	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300028881\|Ga0307277_10079891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1368	Open in IMG/M
3300028884\|Ga0307308_10380176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300028884\|Ga0307308_10603185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300028885\|Ga0307304_10384839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300031094\|Ga0308199_1065514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 32-66-8	741	Open in IMG/M
3300031226\|Ga0307497_10764606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300031736\|Ga0318501_10203496	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300031740\|Ga0307468_101324538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300031943\|Ga0310885_10670925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300031947\|Ga0310909_11238098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300032063\|Ga0318504_10336835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.52%
Host-Associated	Host-Associated	35.85%
Engineered	Engineered	0.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.49%
Plants	Host-Associated → Plants	35.85%
Aquatic	Environmental → Aquatic	5.03%
Modeled	Engineered → Modeled	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.95%
Sediment	Environmental → Aquatic → Sediment	3.14%
Freshwater	Environmental → Aquatic → Freshwater	1.89%
Floodplain	Environmental → Terrestrial → Floodplain	0.63%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.63%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.18%
Loam	Environmental → Terrestrial → Soil → Loam	6.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.26%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.26%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.63%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.63%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.63%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.26%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.26%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.63%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.63%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0428.00006080	2166559005	Simulated	DSLPAEVPTQDLPDDIIREIPLIRGHKFVKFDDRILVVSSSRLVVAMIPRY
deepsgr_00868900	2199352025	Soil	VPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
JGI1027J11758_126075571	3300000789	Soil	DATVAHVAAPAVTDPLPREVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMISRYNLLP*
JGI11643J12802_123277433	3300000890	Soil	PAAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVV
JGI1027J12803_1096994431	3300000955	Soil	MRVSDALVADGPTPEIADALPEQVPMQDLPAGVTQDIPAVQGHKFVKFDDRILIVNASSRVVVAMIPRYKLLP*
JGI10216J12902_1213633921	3300000956	Soil	ALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
JGI24747J21853_10502831	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	QVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
JGI24737J22298_101105202	3300001990	Corn Rhizosphere	VADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
JGI24743J22301_100124543	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	AAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
JGI24744J21845_100270511	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	PAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
JGI25390J43892_101393731	3300002911	Grasslands Soil	MRIADAPVAHAPAPAVADALPAGVPMQDLPAGLTREIPLVHGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP*
Ga0062590_1003359612	3300004157	Soil	GRIFDGVMLVPDAQVAHVPAPAVADPLPREVPLHDLPAGVTRDIPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0062590_1016423262	3300004157	Soil	PPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0062592_1027168271	3300004480	Soil	APVAHAPPPAVADALPREMPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0062591_1013216901	3300004643	Soil	RGRIFDGVMLVPDAQVAHVPAPAVADPLPREVPLHDLPAGVTRDIPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0066869_100478311	3300005165	Soil	EQRGRIFDGVMLVPDAQVAHVPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070676_110954652	3300005328	Miscanthus Rhizosphere	EQRGRIFDGVMLVPDAQVAYVPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070683_1006903211	3300005329	Corn Rhizosphere	PRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0068869_1006629691	3300005334	Miscanthus Rhizosphere	EQRGRIFDGVMLVPDAQVAHVPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVINSASRVVVAMIPRYKLLP*
Ga0070660_1009743472	3300005339	Corn Rhizosphere	DEQRGRIYDGVMLVPDAPVAHAPVAHAPPPAVADALPREMPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0070689_1004843611	3300005340	Switchgrass Rhizosphere	PRKHPELPLSDEQRGRIYDGVMLVPDAPVAHAPPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0070669_1018542461	3300005353	Switchgrass Rhizosphere	PDAPVAHAPPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0070674_1014709521	3300005356	Miscanthus Rhizosphere	SVGPRSRAELALSDEQRGRIFDGVMLVPDAQVAYVPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070674_1020609452	3300005356	Miscanthus Rhizosphere	VPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0070673_1004399181	3300005364	Switchgrass Rhizosphere	GGDHTDTSLMDETTGSVGSRSHAELALSDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070659_1004195641	3300005366	Corn Rhizosphere	SDEQRGRIFYGVMLVPDAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070659_1009915222	3300005366	Corn Rhizosphere	APVAHAPPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0070667_1021489081	3300005367	Switchgrass Rhizosphere	RASIDDTDASLMDETTGSVGPRKHPELPLSDEQRGRIYDGVMLIPDAPVAHAPPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0070678_1001846951	3300005456	Miscanthus Rhizosphere	RIYDGVMLVPDAQVAHVPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070699_1009277031	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GDDTDTSLMDETTGSVGSRSHAELALSDEQRGRIFDGVMLVPGAQIAHVPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070679_1001972682	3300005530	Corn Rhizosphere	PVSDMTAPEVADSLPEEVPMQELPTDIIQEIPLVRGHRFVKFDDRILVVSSASRLVVAMIPRYKPLP*
Ga0070684_1005576072	3300005535	Corn Rhizosphere	DGVMLVPDAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070697_1013769262	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0068853_1020356972	3300005539	Corn Rhizosphere	SLPEEVPMQKLPADIIQEIPLVRGHSFVKFDDRILVVSSTSRLVVAMIPRYKLLP*
Ga0070672_1001370041	3300005543	Miscanthus Rhizosphere	SLMDETTGSVGSRSHAELALSDEQRGRIFDGVMLVPAAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0070664_1016540401	3300005564	Corn Rhizosphere	LPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0068854_1020401322	3300005578	Corn Rhizosphere	PAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0070702_1009342312	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GSRSHAELALSDEQRGRIFDGVMLVPDAQVAHVPAPAVADPLPREVPLHDLPAGVTRDIPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0068852_1015256211	3300005616	Corn Rhizosphere	SVGSRSHAELALSDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0068851_109231921	3300005834	Corn Rhizosphere	GGIETDTSLMDETTGSVGSRNHAELALSDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0075428_1016797741	3300006844	Populus Rhizosphere	MRIPDAPVADVPPPEIAQALPQSVPLQDLPAGVAREVPQVEGHKFVKFDDRILVINPANRVVVAMIPRYKLLP*
Ga0075430_1004735962	3300006846	Populus Rhizosphere	APVAHAPAPAVADALPAEVPMQDLPAGLTREIPLVHGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP*
Ga0075429_1001335971	3300006880	Populus Rhizosphere	APAPAVADALPAEVPMQDLPAGLTRGIPLVHGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP*
Ga0075429_1018583032	3300006880	Populus Rhizosphere	AVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0105245_116005901	3300009098	Miscanthus Rhizosphere	LPEEVPMQELPNDIIREIPRVRGHKFVKFDDRILVVSSASRLVIAMIPRYKLLP*
Ga0105247_107086831	3300009101	Switchgrass Rhizosphere	PSEVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAESRVVVAMIPRYKLLP*
Ga0105247_109708451	3300009101	Switchgrass Rhizosphere	GSRSHAELALSDEQRGRIFDGVMLVPDAQVAHTPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0105243_114149722	3300009148	Miscanthus Rhizosphere	EEVPMQDLPNEILREIPLAHGHKFVKFDDRILVISATSRLVVAMIPRYKLLL*
Ga0105242_107098931	3300009176	Miscanthus Rhizosphere	GVMLVPDAQVAHVPAPAVADPLPREVPLHDLPAGVTRDIPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0105242_107462882	3300009176	Miscanthus Rhizosphere	RIFDGVMLVSDAQVAHMPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAASRVVVAMIPRYKLLP*
Ga0126313_107357412	3300009840	Serpentine Soil	QVAHLPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSTSRVVVAMIPRYKLLP*
Ga0126308_105003502	3300010040	Serpentine Soil	PLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSTSRVVVAMIPRYKLLP*
Ga0126384_119963801	3300010046	Tropical Forest Soil	ELAEALPGGVPLQDLPAGVTRDIPQVRGHKFVKFDDRILVVDPASRLVVAMIPRYKLMD*
Ga0126319_10180972	3300010147	Soil	PELAEALADEVPMQDLPLSVVRKLPQVEGLKFAKYDDRIVVVNPASRLVVAMIPRYKLMP
Ga0126376_124995463	3300010359	Tropical Forest Soil	IADALPSEVPLRDLPTSVIRQVPLVEGHQFVKFDDRILVVNPASRIVVAMIPRYKLLQ*
Ga0134125_119016112	3300010371	Terrestrial Soil	DGVMLVPDAQVAHTPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0134126_121587132	3300010396	Terrestrial Soil	VPAPAVADPLPREVPLHDLPAGVTRDIPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0134124_110188891	3300010397	Terrestrial Soil	SHAELALSDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPSEVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAESRVVVAMIPRYKLLP*
Ga0134122_133848921	3300010400	Terrestrial Soil	TGSVGSRSHTELALSDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0134123_126061111	3300010403	Terrestrial Soil	MRISDAPVTEMAAPEVADPLPEEVPMQELPQIPLVRGHKFVRLDDRILVVSSASRLVVAMIPRYKLLP*
Ga0105246_115993942	3300011119	Miscanthus Rhizosphere	ADTSLMDETTGSVGSRSHAELALSDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAESRVVVAMIPRYKLLP*
Ga0137374_107766022	3300012204	Vadose Zone Soil	YESVMRIADAPVAQAPGPAVADALPAGVPMQDLPAGLTREIPLVHGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP*
Ga0150985_1108250661	3300012212	Avena Fatua Rhizosphere	PAEVPTQDLPDDIIREIPLIRGHKFVKFDDRILVISSSRLVVAMLPRYKLLP*
Ga0150985_1165364262	3300012212	Avena Fatua Rhizosphere	MLVPDAQVAHVPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0150984_1001463891	3300012469	Avena Fatua Rhizosphere	VTEMAAPEVAGSLPEDVPMQDLPSGITRDIPAVRGHKFVKFDDRILVVRSASRLVVAMIPRYKLLP*
Ga0150984_1037975502	3300012469	Avena Fatua Rhizosphere	AELALSDEQRWRIFDGVMLVPDAQVAHMAAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0137397_111240381	3300012685	Vadose Zone Soil	HVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0157286_103385431	3300012908	Soil	TDTSLMDETTGSVGSRSHAELALSDEQRGRIFDGVMLVPAAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0157297_100114643	3300012914	Soil	SLPEEVPMQELPTDIIQEIPLVRGHRFVKFDDRILVVSSASRLVVAMIPRYKPLP*
Ga0157302_103863661	3300012915	Soil	AVADSLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVINSASRVVVAMIPRYKLLP*
Ga0162650_1000405372	3300012939	Soil	AVADPLPREVPLHDLPAGVTRDVPLVERPHFATFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0164303_100917521	3300012957	Soil	TDTSLMDETTGSVGSRSHAELALSDEQRGRIFDGVMLVSDAQVAHMPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAASRVVVAMIPRYKLLP*
Ga0164301_101358633	3300012960	Soil	DGVMLVSDAQVAHMPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAASRVVVAMIPRYKLLP*
Ga0164302_105225052	3300012961	Soil	VPVAEVAAPEVADSLPAEVPTQDLPDDIIREIPLIRGHKFVKFDDRILVVSSSRLVVAMIPRYKLLP*
Ga0164302_109439042	3300012961	Soil	RISDAPVTEMAALEVADSLPEEVPMQELPTDIIREIPLVRGHKFVKFDDRILVVSSASRLVVAMIPRYKLLP*
Ga0164308_105898372	3300012985	Soil	RAGVIETDTSLMDETTGSVGSRNHAELALSDEQRGRIFDGVMLVPDAQVAHMAAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0164306_103858072	3300012988	Soil	LVPDAPVAHAPPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP*
Ga0157373_111905691	3300013100	Corn Rhizosphere	AVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0157374_100298616	3300013296	Miscanthus Rhizosphere	LMDETTGSVGSRSHVELALSDEQRGRIFDGVMLVPDAQDAHMPAPAVADPLPRDVLLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0157374_109225072	3300013296	Miscanthus Rhizosphere	SDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPSEVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAESRVVVAMIPRYKLLP*
Ga0157378_129203551	3300013297	Miscanthus Rhizosphere	RSHAELALSDEQRGRIFDGVILVPDAQVAHVPAPAVADPLPREVPLHDLPAGVTRDIPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP*
Ga0157380_111495722	3300014326	Switchgrass Rhizosphere	MEASLEVASSLLEEVPTQEPPIDPIREIPLVRGHKFVKFDDRILVVSSASRLVVAMIPRYKLLP*
Ga0157376_101328121	3300014969	Miscanthus Rhizosphere	LMDETTGSVGSRSHAELALSDEQRGRIFDGVMLVPDAQVAHVPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP*
Ga0132256_1034415702	3300015372	Arabidopsis Rhizosphere	HMPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAASRVVVAMIPRYKLLP*
Ga0132255_1002317814	3300015374	Arabidopsis Rhizosphere	MRISDAPVTEMAALEVADSLPEEVPMQELPTDIIREIPLVRGHKFVKFDDRILVVSSASRLVVAMIPRYKLLP*
Ga0132255_1024820322	3300015374	Arabidopsis Rhizosphere	VTEMAAPEVADSLPEEVPMQELPTDIIHEIPLVRGHKFVKFDDRILVVSSTSRLVVAMMPRYKLLP*
Ga0182041_115853671	3300016294	Soil	APAPALADALSSEVPMQDLPASVTREIPLVQGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP
Ga0163161_121022611	3300017792	Switchgrass Rhizosphere	DEQRGRIFDGVMLVPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0184610_12577422	3300017997	Groundwater Sediment	VPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKILP
Ga0184604_102875582	3300018000	Groundwater Sediment	GRIFDGVMLVPDAQVAHVPAPAVADPLPREVPLHNLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0184605_102435933	3300018027	Groundwater Sediment	APEVAGSLPEGVPMQDLPAGITREIPAVRGHKFVKFDDRILVVSSESRLVVAMIPRYKLL
Ga0184640_103610832	3300018074	Groundwater Sediment	TGSVGSPKSTELALSDEQRGRIYDGVMLVPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0190272_123159412	3300018429	Soil	EVADSLPEGVPMQELPTDIIHENPLVRGHKFVKFDDRILVVSSASRLVVAMIPRYKLLP
Ga0190268_121291932	3300018466	Soil	AAPEVADSLPAEVPTQELPTDIIREIPLARGHKFVKFDDRILVVSASSRLVVAMIPR
Ga0190270_115423542	3300018469	Soil	ADPLSRDVPLHDLPAGVTRDVPLVQGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0173481_101512382	3300019356	Soil	LSDEQRGRIFDGVMLVPDAQVAHVPAPAVADPLPREVPLHDLPAGVTRDIPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP
Ga0190267_112037661	3300019767	Soil	EVAAPEVADSLPAEMPMQDMPKDIIREVPLVRGHKFVKFDDRILVVSSASRLVVAMIPRYKLLP
Ga0190267_112950882	3300019767	Soil	EVADSLPEEFPLQALPTDIIHEIPLVRGHSFVKFDDRILVVSSASRLVVAMIPRYKLLP
Ga0193704_10790311	3300019867	Soil	HVAPPAVADPLPRDVPLHDLPAGVTRDVPLVQGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0193731_11617011	3300020001	Soil	VTEVAAPEVAGSLPEDVPMQDLPSGITRDIPAVRGHKFVKFDDRILVVSSEGRLVVAMIPRYKLLP
Ga0206352_109311611	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	SRSHTELALSDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0210381_100506443	3300021078	Groundwater Sediment	SVGSPKSTELALSDEQRGRIYDGVMLVPDAQVAHVAAPAVADPLPRNVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0210380_100427091	3300021082	Groundwater Sediment	AAPEVADSLPEEVPMQELPNDIIREIPLVRGHKFVKFDDRILVVSSASRLVIAMIPRYKLLP
Ga0182009_108010281	3300021445	Soil	PAAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLL
Ga0193698_10044333	3300021968	Soil	HVAAPAVADPLPRDVPLHDLPAGVTRDVPLVQGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0224452_11197492	3300022534	Groundwater Sediment	PVAHVAAPAVADPLPREVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0207693_104472702	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0207644_108278763	3300025931	Switchgrass Rhizosphere	MSDVPVTEMVAPEVADPLPEEVAMQELPTDIIHEIPLVRGHSFVKFNDRILVVSSASRLVVAMIPRYKLLP
Ga0207686_111345511	3300025934	Miscanthus Rhizosphere	VAHVPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0207670_102788483	3300025936	Switchgrass Rhizosphere	MLVPDAPVAHAPPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP
Ga0207679_104475031	3300025945	Corn Rhizosphere	VAHAPPAAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP
Ga0207658_107066832	3300025986	Switchgrass Rhizosphere	GRIFDGVMLVPDAQVAHVPAPAVADPLPREVPLHDLPAGVTRDIPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP
Ga0207677_117821351	3300026023	Miscanthus Rhizosphere	PEVADPLPEEVPMQELPTDIIHEIPLVRGHKFVKFDDRILVISATSRLVVAMIPRYKLLP
Ga0207639_104687541	3300026041	Corn Rhizosphere	LVPDAQVAHMPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0207678_110602973	3300026067	Corn Rhizosphere	MRISDAPVSDMTAPEVADSLPEEVPMQKLPADIIQEIPLVRGHSFVKFDDRILVVSSTSRLVVAMIPRYKLLP
Ga0207683_103076132	3300026121	Miscanthus Rhizosphere	EQRGRIYDGVMLVPDAQVAHVPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0209689_12954412	3300027748	Soil	MPRAHAPAPAVADALPAGVPMQDLPAGLTREIPLVHGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP
Ga0209465_105626101	3300027874	Tropical Forest Soil	DAPVAQAPGPDVAEALPDEVPMQELPLSVLRRLPQVAGLKFAKFDDRIVVVNPASRIVVAMIPRYKLMP
Ga0207428_106572401	3300027907	Populus Rhizosphere	ALSDEQRGRIYDGVMLVPDAPVAHAPPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP
Ga0209526_104411491	3300028047	Forest Soil	DAPVARAPAPELAEALPGGVPMQELPAGVVREIPQVRGHKFVKFDDRILVVDPASRLVVAMIPRYKLMD
Ga0268266_107440232	3300028379	Switchgrass Rhizosphere	PAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSSSRVVVAMIPRYKLLP
Ga0268264_113559232	3300028381	Switchgrass Rhizosphere	ELALSDEQRGRIFDGVMLVPDAQVAHMPAPAVADPLPSEVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNAESRVVVAMIPRYKLLP
Ga0307279_100534991	3300028709	Soil	AHLPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSTSRVVVAMIPRYKLLP
Ga0307318_100902492	3300028744	Soil	RGRIYDGVMLVPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVDSASRVVVAMIPRYKLLP
Ga0307297_101629011	3300028754	Soil	LSDEQRGRIFDGVMLVPEAQVAHLPAPAVADPLPRDVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSTSRVVVAMIPRYKLLP
Ga0307280_100822281	3300028768	Soil	VPDAQVAHLPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSTSRVVVAMIPRYKLLP
Ga0307320_104738951	3300028771	Soil	TELALSDEQRGRIYDGVMLVPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0307288_100407701	3300028778	Soil	QRGRIYDGVMLVPDATVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKILP
Ga0307288_100937872	3300028778	Soil	SVGSRSHAELALSDEQRGRIFDGVMLVPDAQVAHLPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSTSRVVVAMIPRYKLLP
Ga0307290_102825342	3300028791	Soil	STALALSDEQRGRIYDGVMLVPDATVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKILP
Ga0307287_101286413	3300028796	Soil	PPELAEALADEVPMQDLPVSVVRKLPQVEGLKFAKFDDRIVVVNPASRLVVAMIPRYKLM
Ga0307287_101328341	3300028796	Soil	GVMLVPDATVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKILP
Ga0307294_102672562	3300028810	Soil	PAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSTSRVVVAMIPRYKLLP
Ga0307310_100907131	3300028824	Soil	VAHVPAPAVADPLPHEVPLHDLPAGVTRDVPLVGGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0307310_101185411	3300028824	Soil	LPEEVPMQDLPSDIIREIPLVRGHKFVKFDDRILVVSSASRLVVAMIPRYKLLP
Ga0307312_101601431	3300028828	Soil	TDASLMDETTGSVGSPKSTELALSDEQRGRIYDGVMLVPDATVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKILP
Ga0307312_103179002	3300028828	Soil	ADASPMDETTGSVGSPKSTELALSDEQRGRIYDGVMLVPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0307314_100880631	3300028872	Soil	ADASPMDETTGSVGSPKSTELALSDEQRGRIYDGVMLVPDAQVAHVAAPAVADPLPREVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVDSASRVVVAMIPRYKLLP
Ga0307289_104303222	3300028875	Soil	LPRNVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0307300_100741052	3300028880	Soil	GRIYDGVMLVPDATVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKILP
Ga0307277_100798911	3300028881	Soil	GHEADASPMDETTGSVGSPKSTELALSDEQRGRIYDGVMLVPDAPVAHVAAPAVADPLPREVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVDSASRVVVAMIPRYKLLP
Ga0307308_103801761	3300028884	Soil	PKSTELALSDEQRGRIYDGVMLVPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0307308_106031851	3300028884	Soil	PKSTALALSDEQRGRIYDGVMLVPDATVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKILP
Ga0307304_103848391	3300028885	Soil	QRGRIYDGVMLVPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVQGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0308189_103918532	3300031058	Soil	REVPLHDLPAGVTRDVPLVQGHQFAKFDDRILVVNSASRMVVAMIPRYKLLP
Ga0308199_10655141	3300031094	Soil	ADSLPEEVPMQELPTDIIHEIPLVRGHKFVKFDDRILVVRSTSRLVVAMIPRYKLLP
Ga0307497_107646061	3300031226	Soil	SPKSSELALSDEQRGRIYDGVMLVPDAQVAHVAAPAVADPLPRDVPLHDLPAGVTRDVPLVRGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0318541_105381311	3300031545	Soil	DAPVAQAPAPALADALSSEVPMQDLPASVTREIPLVQGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP
Ga0318501_102034962	3300031736	Soil	PALADALSSEVPMQDLPASVTREIPLVQGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP
Ga0307468_1013245383	3300031740	Hardwood Forest Soil	EMAASKVADALPEEVPMQELPNDIIREIPLVRGHKFVKFDDRILVVSSASRLVIAMIPRYKLLP
Ga0310885_106709251	3300031943	Soil	DETTGSVGPRKHPELPLSDEQRGRIYDGVMLVPDAPVAHAPPPAVADALPREVPLHDLPAGVTRDVPLVEGHKFVKFDDRILVVDSASRVVVAMIPRYKLLP
Ga0310909_112380981	3300031947	Soil	RLYEGVMRIADASVANVPAPAVADALPSGVPLQDPAGMAQEVPQVRGHKFVKFDDRIVVVDPKSRVVVAMIPRYKLLP
Ga0310906_103120252	3300032013	Soil	VAYVPAPAVADPLPREVPLHDLPAGVTRDVPLVEGHQFAKFDDRILVVNSASRVVVAMIPRYKLLP
Ga0318504_103368351	3300032063	Soil	LYEGVMRIADASVANVPAPAVADALPSGVPLQDPAGMAQEVPQVRGHKFVKFDDRIVVVDPKSRVVVAMIPRYKLLP
Ga0318513_100925071	3300032065	Soil	APVAQAPAPALADALSSEVPMQDLPASVTREIPLVQGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP
Ga0306924_120083241	3300032076	Soil	AADVADALPDEVPLQDMPMSVARSLPQVKDLKFVKLDDRILVVNPASRVVVAMIPRYKLI
Ga0318577_100849671	3300032091	Soil	RVPAPALADALSSEVPMQDLPASVTREIPLVQGHKFVKFDDRIVVVNPASRLVVAMIPRYKLLP
Ga0307472_1024286642	3300032205	Hardwood Forest Soil	PVVRVPAPELAQALPGGVAMQDLPAGVIREIPQVRGHKFVKFDDRILVVDPASRLVVAMIPRYKLMD
Ga0364935_0101773_13_204	3300034151	Sediment	MAAPKVADALPEEVPMQELPNDIIREIPRVRGHKFVKFDDRILVVSSASRLVIAMIPRYKLLP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041628

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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