Metagenome Family F041413

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041413
Family Type	Metagenome
Number of Sequences	160
Average Sequence Length	54 residues
Representative Sequence	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW
Number of Associated Samples	100
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	42.50 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.375 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.65% β-sheet: 25.58% Coil/Unstructured: 69.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF04392	ABC_sub_bind	8.12
PF08281	Sigma70_r4_2	3.75
PF04542	Sigma70_r2	3.75
PF09926	DUF2158	3.12
PF13414	TPR_11	2.50
PF03401	TctC	1.25
PF13358	DDE_3	0.62
PF00353	HemolysinCabind	0.62
PF13392	HNH_3	0.62
PF04366	Ysc84	0.62
PF04773	FecR	0.62
PF00149	Metallophos	0.62
PF00239	Resolvase	0.62
PF13676	TIR_2	0.62
PF09339	HTH_IclR	0.62
PF01895	PhoU	0.62
PF13467	RHH_4	0.62
PF00072	Response_reg	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	8.12
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	3.75
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	3.75
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	3.75
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	3.75
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.25
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.62
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.62
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.62 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.62 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.62 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.62 %
Salinibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Salinibacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
unclassified Salinibacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Salinibacterium → unclassified Salinibacterium	0.62 %
Bradyrhizobium sp. AT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	0.62 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
Salinibacterium sp. ZJ454	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Salinibacterium → unclassified Salinibacterium → Salinibacterium sp. ZJ454	0.62 %
Bradyrhizobium sp. AT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	0.62 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10029089	Not Available	1496	Open in IMG/M
3300001661\|JGI12053J15887_10115053	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300001867\|JGI12627J18819_10331313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	615	Open in IMG/M
3300004633\|Ga0066395_10957060	Not Available	520	Open in IMG/M
3300005332\|Ga0066388_103218042	Not Available	834	Open in IMG/M
3300005332\|Ga0066388_103413443	Not Available	811	Open in IMG/M
3300005332\|Ga0066388_104367310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	720	Open in IMG/M
3300005332\|Ga0066388_106246401	Not Available	601	Open in IMG/M
3300005332\|Ga0066388_106553239	Not Available	587	Open in IMG/M
3300005436\|Ga0070713_101855807	Not Available	585	Open in IMG/M
3300005439\|Ga0070711_100177466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1628	Open in IMG/M
3300005467\|Ga0070706_100117772	All Organisms → cellular organisms → Bacteria → Proteobacteria	2474	Open in IMG/M
3300005552\|Ga0066701_10044720	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M
3300005561\|Ga0066699_10227854	Not Available	1308	Open in IMG/M
3300005575\|Ga0066702_10202000	Not Available	1203	Open in IMG/M
3300005713\|Ga0066905_100076573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2178	Open in IMG/M
3300005713\|Ga0066905_100390523	Not Available	1125	Open in IMG/M
3300005713\|Ga0066905_100657003	Not Available	894	Open in IMG/M
3300005713\|Ga0066905_101866804	Not Available	555	Open in IMG/M
3300005713\|Ga0066905_102178534	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005764\|Ga0066903_100110399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3768	Open in IMG/M
3300005764\|Ga0066903_100159133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3269	Open in IMG/M
3300005764\|Ga0066903_100176986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3135	Open in IMG/M
3300005764\|Ga0066903_100923075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1583	Open in IMG/M
3300005764\|Ga0066903_101166035	Not Available	1427	Open in IMG/M
3300005764\|Ga0066903_101277688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1369	Open in IMG/M
3300005764\|Ga0066903_101361739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Salinibacterium → unclassified Salinibacterium → Salinibacterium sp. ZJ454	1330	Open in IMG/M
3300005764\|Ga0066903_101524262	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300005764\|Ga0066903_101677878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	1209	Open in IMG/M
3300005764\|Ga0066903_101903435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1139	Open in IMG/M
3300005764\|Ga0066903_102388773	Not Available	1022	Open in IMG/M
3300005764\|Ga0066903_102477153	Not Available	1004	Open in IMG/M
3300005764\|Ga0066903_102697984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300005764\|Ga0066903_103349158	Not Available	865	Open in IMG/M
3300005764\|Ga0066903_103411161	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005764\|Ga0066903_103426870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	855	Open in IMG/M
3300005764\|Ga0066903_104172708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	773	Open in IMG/M
3300005764\|Ga0066903_104830910	Not Available	716	Open in IMG/M
3300005764\|Ga0066903_105477097	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_106733351	Not Available	597	Open in IMG/M
3300005764\|Ga0066903_106900944	Not Available	589	Open in IMG/M
3300006028\|Ga0070717_11425571	Not Available	629	Open in IMG/M
3300006046\|Ga0066652_101277835	Not Available	693	Open in IMG/M
3300006172\|Ga0075018_10219481	Not Available	909	Open in IMG/M
3300006173\|Ga0070716_100343579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1054	Open in IMG/M
3300006797\|Ga0066659_10436577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1038	Open in IMG/M
3300006804\|Ga0079221_11330809	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006845\|Ga0075421_101284837	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300006852\|Ga0075433_10810766	Not Available	818	Open in IMG/M
3300006854\|Ga0075425_102808864	Not Available	536	Open in IMG/M
3300006871\|Ga0075434_100576181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1145	Open in IMG/M
3300006871\|Ga0075434_102385188	Not Available	531	Open in IMG/M
3300006871\|Ga0075434_102581707	Not Available	509	Open in IMG/M
3300006904\|Ga0075424_101563231	Not Available	700	Open in IMG/M
3300006904\|Ga0075424_102028759	Not Available	607	Open in IMG/M
3300007076\|Ga0075435_100399158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1182	Open in IMG/M
3300007076\|Ga0075435_100436350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1129	Open in IMG/M
3300007076\|Ga0075435_100539404	Not Available	1010	Open in IMG/M
3300009094\|Ga0111539_13516601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	503	Open in IMG/M
3300010043\|Ga0126380_12100946	Not Available	519	Open in IMG/M
3300010043\|Ga0126380_12223148	Not Available	507	Open in IMG/M
3300010047\|Ga0126382_11572422	Not Available	608	Open in IMG/M
3300010048\|Ga0126373_11607879	Not Available	714	Open in IMG/M
3300010358\|Ga0126370_10477222	Not Available	1047	Open in IMG/M
3300010398\|Ga0126383_10683398	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300012180\|Ga0153974_1086520	Not Available	705	Open in IMG/M
3300012205\|Ga0137362_10027368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4478	Open in IMG/M
3300012210\|Ga0137378_10116443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2463	Open in IMG/M
3300012210\|Ga0137378_11363189	Not Available	624	Open in IMG/M
3300012359\|Ga0137385_10370901	Not Available	1223	Open in IMG/M
3300012362\|Ga0137361_10031492	All Organisms → cellular organisms → Bacteria	4205	Open in IMG/M
3300012971\|Ga0126369_10407302	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300015264\|Ga0137403_11013852	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300015371\|Ga0132258_10091974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7117	Open in IMG/M
3300015373\|Ga0132257_101993168	Not Available	748	Open in IMG/M
3300016294\|Ga0182041_10646834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	933	Open in IMG/M
3300016371\|Ga0182034_10211244	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300016387\|Ga0182040_10726391	Not Available	814	Open in IMG/M
3300016404\|Ga0182037_10534025	Not Available	988	Open in IMG/M
3300016404\|Ga0182037_11730741	Not Available	558	Open in IMG/M
3300016445\|Ga0182038_10332564	Not Available	1253	Open in IMG/M
3300017965\|Ga0190266_10207919	Not Available	943	Open in IMG/M
3300018081\|Ga0184625_10060905	Not Available	1904	Open in IMG/M
3300018468\|Ga0066662_12232559	Not Available	574	Open in IMG/M
3300019890\|Ga0193728_1071753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1644	Open in IMG/M
3300021082\|Ga0210380_10471941	Not Available	575	Open in IMG/M
3300021168\|Ga0210406_10417249	Not Available	1073	Open in IMG/M
3300021178\|Ga0210408_10746398	Not Available	769	Open in IMG/M
3300021478\|Ga0210402_10043859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3896	Open in IMG/M
3300021560\|Ga0126371_11445410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300021560\|Ga0126371_11510952	Not Available	800	Open in IMG/M
3300021560\|Ga0126371_11972717	Not Available	702	Open in IMG/M
3300024347\|Ga0179591_1210470	All Organisms → cellular organisms → Bacteria → Proteobacteria	4321	Open in IMG/M
3300025929\|Ga0207664_10131459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2107	Open in IMG/M
3300026335\|Ga0209804_1208018	Not Available	803	Open in IMG/M
3300027748\|Ga0209689_1350132	Not Available	565	Open in IMG/M
3300027909\|Ga0209382_10980814	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300028807\|Ga0307305_10054501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1841	Open in IMG/M
3300031199\|Ga0307495_10222672	Not Available	529	Open in IMG/M
3300031545\|Ga0318541_10130541	Not Available	1369	Open in IMG/M
3300031564\|Ga0318573_10533714	Not Available	632	Open in IMG/M
3300031573\|Ga0310915_10050870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2673	Open in IMG/M
3300031573\|Ga0310915_10511967	Not Available	853	Open in IMG/M
3300031573\|Ga0310915_10688832	Not Available	722	Open in IMG/M
3300031573\|Ga0310915_10789068	Not Available	668	Open in IMG/M
3300031573\|Ga0310915_10876882	Not Available	629	Open in IMG/M
3300031573\|Ga0310915_11279564	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031668\|Ga0318542_10291511	Not Available	834	Open in IMG/M
3300031668\|Ga0318542_10690886	Not Available	533	Open in IMG/M
3300031680\|Ga0318574_10497491	Not Available	714	Open in IMG/M
3300031719\|Ga0306917_10026007	Not Available	3691	Open in IMG/M
3300031719\|Ga0306917_10226613	Not Available	1424	Open in IMG/M
3300031719\|Ga0306917_10906767	Not Available	689	Open in IMG/M
3300031724\|Ga0318500_10256607	Not Available	849	Open in IMG/M
3300031744\|Ga0306918_10054284	All Organisms → cellular organisms → Bacteria → Proteobacteria	2676	Open in IMG/M
3300031747\|Ga0318502_10241986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1052	Open in IMG/M
3300031763\|Ga0318537_10085123	All Organisms → cellular organisms → Bacteria → Proteobacteria	1166	Open in IMG/M
3300031771\|Ga0318546_10079611	All Organisms → cellular organisms → Bacteria → Proteobacteria	2111	Open in IMG/M
3300031771\|Ga0318546_10834837	Not Available	649	Open in IMG/M
3300031778\|Ga0318498_10252569	Not Available	795	Open in IMG/M
3300031793\|Ga0318548_10197363	Not Available	987	Open in IMG/M
3300031799\|Ga0318565_10329749	Not Available	741	Open in IMG/M
3300031845\|Ga0318511_10170153	All Organisms → cellular organisms → Bacteria → Proteobacteria	959	Open in IMG/M
3300031879\|Ga0306919_10015554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4457	Open in IMG/M
3300031890\|Ga0306925_10387228	All Organisms → cellular organisms → Bacteria → Proteobacteria	1499	Open in IMG/M
3300031912\|Ga0306921_10058770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4383	Open in IMG/M
3300031912\|Ga0306921_10081873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3719	Open in IMG/M
3300031912\|Ga0306921_11957901	Not Available	625	Open in IMG/M
3300031945\|Ga0310913_10552095	Not Available	817	Open in IMG/M
3300031947\|Ga0310909_10028248	All Organisms → cellular organisms → Bacteria → Proteobacteria	4128	Open in IMG/M
3300031947\|Ga0310909_11676002	Not Available	502	Open in IMG/M
3300031981\|Ga0318531_10347505	Not Available	670	Open in IMG/M
3300032001\|Ga0306922_10081329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3402	Open in IMG/M
3300032001\|Ga0306922_10636295	Not Available	1127	Open in IMG/M
3300032001\|Ga0306922_11773784	Not Available	608	Open in IMG/M
3300032059\|Ga0318533_11117186	Not Available	577	Open in IMG/M
3300032076\|Ga0306924_10446634	Not Available	1477	Open in IMG/M
3300032076\|Ga0306924_12608529	Not Available	504	Open in IMG/M
3300032094\|Ga0318540_10432782	Not Available	635	Open in IMG/M
3300032094\|Ga0318540_10448105	Not Available	623	Open in IMG/M
3300032180\|Ga0307471_102551755	Not Available	647	Open in IMG/M
3300032205\|Ga0307472_101395475	Not Available	679	Open in IMG/M
3300032261\|Ga0306920_100011605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11917	Open in IMG/M
3300032261\|Ga0306920_100068408	All Organisms → cellular organisms → Bacteria	5198	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.38%
Host-Associated	Host-Associated	10.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Plants	Host-Associated → Plants	10.00%
Aquatic	Environmental → Aquatic	1.88%
Fungi	Host-Associated → Fungi	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.75%
Sediment	Environmental → Aquatic → Sediment	1.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.25%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Mycelium	Host-Associated → Fungi → Mycelium	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.88%
Loam	Environmental → Terrestrial → Soil → Loam	25.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.25%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100290895	3300000597	Forest Soil	VIPIQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEILRSVPRAW*
JGI12053J15887_101150532	3300001661	Forest Soil	MATQPPPKSRLLAHAPQCSRCRKAMKVRTLLPGRKVDDVAYRCEDCGEEVIRAVPRVW*
JGI12627J18819_103313131	3300001867	Forest Soil	KPKPRLEAHAPQCVRCKALMKVRILIPGRKVDDVSYRCEKMLSVPRAV*
Ga0066395_109570601	3300004633	Tropical Forest Soil	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW*
Ga0066388_1032180421	3300005332	Tropical Forest Soil	VIPIQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEI
Ga0066388_1034134432	3300005332	Tropical Forest Soil	LQKPKSRLEAHAPQCARCKASMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0066388_1043673102	3300005332	Tropical Forest Soil	VTPLQKPKSRLEAHAPQCARCKDLMKVRILLPGRKVDDVAYRCEKCGSEVLQSVPRAR*
Ga0066388_1062464012	3300005332	Tropical Forest Soil	MRASAPPTNRLLIHAPKCSRCKRPMKVCTLLPGRKVDDVAYRCEECGEEVVRQVPRVW*
Ga0066388_1065532391	3300005332	Tropical Forest Soil	VTRLKKPKSRLEAHAPQCARSKTLMKVRILIPGRKADDVSYRCGKCGEKVIRSVPRTW*
Ga0070713_1018558071	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTPPQKPKSRLEAHAPQCARCRTLMKVRILIPGRKVDDVAYRCEKCGGEVRQSVPRAR*
Ga0070711_1001774662	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTPLKKPKPRLEAHAPQCVRCKALMKVRILIPGRKVDDVSYRCEKMLSVPRAV*
Ga0070706_1001177726	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTPPQKPKSHLEAHAPQCARCRTLMKVRILIPGRKVDDVAYRCEKCGGEVRQSVPRAR*
Ga0066701_100447202	3300005552	Soil	VTPLQKPKSRLEAHAPECARCKAFMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW*
Ga0066699_102278543	3300005561	Soil	VTPLQKPKSRLEAHAPQCARCKAIMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW*
Ga0066702_102020002	3300005575	Soil	VTPLQKPKSRLEAHAPECAHCKAFMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW*
Ga0066905_1000765734	3300005713	Tropical Forest Soil	VTPLQKPKSRLEAYAPQCVRCKALMKVRILIPGRKVDDVSYRCEKCGGEVIRSVPRAW*
Ga0066905_1003905233	3300005713	Tropical Forest Soil	VTPLQKPKSRLETHAPKCTRCKALMKVRILFPGRKVDDVAYRCEKCGAEVMQSVPRAW*
Ga0066905_1006570032	3300005713	Tropical Forest Soil	VTTLQKPKSRLETHAPKCARCRMLMKMRILIPGRKVDDVAYRCEKCGGEVIRSVPRAG*
Ga0066905_1018668041	3300005713	Tropical Forest Soil	VTPLQKPKSRLEAHAPKCARCKALMKVRILIPGRKVDDVAYRCEKCGSEILRSVPRAW*
Ga0066905_1021785341	3300005713	Tropical Forest Soil	PKSRLEAHAPQCARCKALMKVRILIPGRKADDVAYRCEKCGSEVLRSVPRAW*
Ga0066903_1001103991	3300005764	Tropical Forest Soil	MTRLADPPKNRLLAHAPNCSHCKRPMKVRTLLPGRKVDDVAYRCEECGEEVVKAVPRVW*
Ga0066903_1001591332	3300005764	Tropical Forest Soil	MPPSVPPINRLLAHAPKCSRCKRPMKVRILLPGRKVDDVAYRCEDCGEEVVREVPRVW*
Ga0066903_1001769868	3300005764	Tropical Forest Soil	MVAPYNKPKSRFETHAPRCARCRAPMKVRILFPGRKVDDVTYRCDKCGAEVMRSVPRPQ*
Ga0066903_1009230752	3300005764	Tropical Forest Soil	VTPLQKSTSRLEAHAPQCARCKALMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0066903_1011660353	3300005764	Tropical Forest Soil	VTPLQKPKSRLEVHAPVCARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW*
Ga0066903_1012776884	3300005764	Tropical Forest Soil	TSLQKPKSRLEAHAPQCARCKVLMKVRILIPGRKSDDVSYSGEKCGGEVMRSVLRAW*
Ga0066903_1013617391	3300005764	Tropical Forest Soil	VTPLQKPKSRLEAHAPKCARCRTLMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0066903_1015242622	3300005764	Tropical Forest Soil	VTPLPKPKSRLEAHAPQCARCKALMKVRILIPGRKADDVAYRCEKCGSEVLRSVPRAW*
Ga0066903_1016778783	3300005764	Tropical Forest Soil	VTPLQKPSRLEAHAPRCARCKARMKVCILIPGRKVDDVSYRCEKCGAEVMRSVPRAW*
Ga0066903_1019034351	3300005764	Tropical Forest Soil	MPPLQKPKSRLEAHAPQCARCRTLMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0066903_1023887733	3300005764	Tropical Forest Soil	VTPLQKPKSRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEECGSEVLRSVPRA*
Ga0066903_1024771533	3300005764	Tropical Forest Soil	VTPLQKPKSRLETHAPKCARCRTLMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0066903_1026979843	3300005764	Tropical Forest Soil	LQKPKSRLETHAPKCARCRTLMKVRILIPGRKIDDVVYRCEKCQAEVMHSVPRAYPRLT*
Ga0066903_1033491581	3300005764	Tropical Forest Soil	VTPLQKPKSRLEAHAPKCAHCRTLMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0066903_1034111612	3300005764	Tropical Forest Soil	MRPADPPKSRLLAHAPRCTLCRKPMKVRILLPGRKVDDVAYRCEDCGEEVMRPVPRAG*
Ga0066903_1034268702	3300005764	Tropical Forest Soil	VAPQEILVRLETHWPKCARCRTLMKARILILGRKVDDLASRCEKCGVEVLRSVPRAR*
Ga0066903_1041727082	3300005764	Tropical Forest Soil	MRLADPSNNRLLANAPKCTRCKRPMKVRTLLPGRKVDDVAYRCEECGEEVVKAVPRVW*
Ga0066903_1048309102	3300005764	Tropical Forest Soil	VTPLQKPKSRLETHAPKCARCKALMKVRILFPGRKVDDVAYRCEKCGAEVMQSVPRAW*
Ga0066903_1054770972	3300005764	Tropical Forest Soil	VPSLQKPKSRLEAHAPQCARCKASMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0066903_1067333512	3300005764	Tropical Forest Soil	VAPLQKPKSRLETHAPQCARCRTLMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0066903_1069009441	3300005764	Tropical Forest Soil	VIPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW
Ga0070717_114255711	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTPLQKPKSRFETHAPKCTRCRALMKVRILIPGRKVDDVAYRCEKCGAEVMQSVPRAR*
Ga0066652_1012778351	3300006046	Soil	MSRSNPIRPLAPPKNRLLAHAPQCSRCRTAMKVRTLLPGRKVDDVAYRCEECGEE
Ga0075018_102194813	3300006172	Watersheds	VTPLQKPKSRLEAHAPQCARCKASMKVRILIPGRKVDDVAYLCEKCGSEVLRSVPRAW*
Ga0070716_1003435792	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTPLKKPKPRLEAHAPQCVRCKALMKVRILIPGRKVDDVSYRCEKCGGEVIRSVPRAV*
Ga0066659_104365772	3300006797	Soil	AHKELEAHAPQCARCRTLMKVRILIPGRKVDDVAYYRCEKCGVEVRQSVPRAR*
Ga0079221_113308091	3300006804	Agricultural Soil	LDALDRPGRLVVRPLQQSRSHLEAHAPKCARCRTLMKVRILIAGRKVDDVAYRWEKCGAEVMQSVPRAR*
Ga0075421_1012848371	3300006845	Populus Rhizosphere	VTPLKKPKPRLEAHAPQCVRCKALMKVRILIPGRK
Ga0075433_108107662	3300006852	Populus Rhizosphere	VTPRQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCEGEVMRSVPRAW*
Ga0075425_1028088642	3300006854	Populus Rhizosphere	VTRLEVHAPECARCKALMKVHVLIPGRKVDDVAYRCEKCGSEVSRSVPRAW*
Ga0075434_1005761811	3300006871	Populus Rhizosphere	VTPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVSYRCEKMLSVPRAV*
Ga0075434_1023851881	3300006871	Populus Rhizosphere	VIKGQIVRRLEQPKSRLETHAPQCTRCRAPMKVRILFPGRKVDDVTYRCDECGAEIMRSVPRPQ*
Ga0075434_1025817071	3300006871	Populus Rhizosphere	LEAHAPQCARCRTLMKVRILIPGRKVDDVAYRCEKCGSEILRSVPRAW*
Ga0075424_1015632312	3300006904	Populus Rhizosphere	QKPKSRLETHAPKCARCRTLMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW*
Ga0075424_1020287592	3300006904	Populus Rhizosphere	MATAGRPKSLLEAHAPPCPLCKGTMKVRTLLPGRKADDVAYRCEECGEEIIRSVPRVWAA
Ga0075424_1022482202	3300006904	Populus Rhizosphere	VTPPQKPKSHLEAHAPQCARCRTLMKVRILIPGRKVD
Ga0075435_1003991583	3300007076	Populus Rhizosphere	VTPPQKPKSHLEAHAPQCARCRTLMKVRILIPGRKVDDVACRCEKCGGEVRQSVPRAR*
Ga0075435_1004363501	3300007076	Populus Rhizosphere	LEAHAPQCARCRTLMKVRILIPGRKVDDVAYRCEKCGSEVSRSVPRAW*
Ga0075435_1005394043	3300007076	Populus Rhizosphere	VTPLQKPKSRLETHAPKCARCRTLMKVRILIPGRKVDDVSYRCEKCGGEVMR
Ga0111539_135166011	3300009094	Populus Rhizosphere	TPLQKPKSRLEAHAPRCARCKALMKVRILIPGRKVDDVAYRCEKCGGEVMRFVPRAV*
Ga0126380_121009462	3300010043	Tropical Forest Soil	VTPLQKPKSRLEAYAPQCVRCKALMKVRILIPGRKIDDVSYRCEKCGGEVIRSVPRAW*
Ga0126380_122231481	3300010043	Tropical Forest Soil	VTPLQKPKSRLETHAPKCARCKALMKVRILFPGRKVDDVAYRCEKCG
Ga0126382_115724221	3300010047	Tropical Forest Soil	SRLEAHAPKCARCKALMKVRILIQGRKVDDVAYRCEKCGSEILRSVPRAW*
Ga0126373_116078793	3300010048	Tropical Forest Soil	VPSLQKPKSRLEAHAPQCARCKASMKVRILIPGRKVDDVSY
Ga0126370_104772221	3300010358	Tropical Forest Soil	MTRLADPPKNRLLAHAPNCSHCKRRMKVRTLLPGRKVDDVAYRCEECGEEVVKAVPRVW*
Ga0126378_132682801	3300010361	Tropical Forest Soil	MRTSVPPTNRLLAHAPKCSRCKRPMKVRTLLPGRKVDDVAYRCEECG
Ga0126383_106833982	3300010398	Tropical Forest Soil	VTPLQKPKSRLEAYAPQCVRCKALMKVRILIPGRKADDVSYRCEKCGGEVIRSVPRAW*
Ga0153974_10865201	3300012180	Attine Ant Fungus Gardens	VTPPQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVSYRCEKCGGEVMRSV
Ga0137362_100273682	3300012205	Vadose Zone Soil	VTPLQKPKSRLEAHAPQCARCKASMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW*
Ga0137362_103594601	3300012205	Vadose Zone Soil	VTPLQNPKSRLEAHAPKCARCKALMKVRILIPGRKVDDVSYR
Ga0137378_101164432	3300012210	Vadose Zone Soil	MLRERVVTPLQKPKSRLEALAPQCARCRRLMKVRILFPGQKVDDVTYRCEECGEEVVRSVARAR*
Ga0137378_113631891	3300012210	Vadose Zone Soil	VTPQQKPKSRLEAHAPQCARCRTLMKVRILIPGRKVDDISYRCEKCGAEVMRSLPRAS*
Ga0137385_103709011	3300012359	Vadose Zone Soil	VTPLQKPKSRLEAHVPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW*
Ga0137361_100314922	3300012362	Vadose Zone Soil	VTPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKIDDVSYRCEKCGGEVMRSVPRAW*
Ga0126375_106845571	3300012948	Tropical Forest Soil	VAPLQKPKSRLETHAPKCARCRTLMKVRILIPGRKVDDVSYRCEK
Ga0126369_104073023	3300012971	Tropical Forest Soil	EAHAPQCARCKDLMKVRILLPGRKVDDVAYRCEKCGSEILRCVPRAW*
Ga0137403_110138522	3300015264	Vadose Zone Soil	VTPLQNPKSRLEAHAPKCARCKALMKVRILIPGRKVDDVSYRYEKCGGEVMRSVPRAW*
Ga0132258_100919742	3300015371	Arabidopsis Rhizosphere	MLRGRLMKPQAKPKSRLAAHAPQCARCRKLMKVRILFPGRKVDDVTYRCEGCGGEEMRSVPREW*
Ga0132257_1019931682	3300015373	Arabidopsis Rhizosphere	MKPQAKPKSRLAAHAPQCARCRKLMKVRILFPGRKVDDVTYRCEGCGGEEMRSVPREW*
Ga0182041_106468342	3300016294	Soil	VTPLQKSTSRLEAHAAQCARCKALMKVRILIPGRKVDDVSYRCEKCGGEVM
Ga0182033_101890611	3300016319	Soil	VTQLQKPKSRLEAHAPECGRCKALMKVRILIPGRKVDDVAYRCEKC
Ga0182034_102112442	3300016371	Soil	KPKRRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEECGSEVLRSVPRAW
Ga0182040_107263911	3300016387	Soil	MTRLADPPKNRLLAHAPNCSHCKRPMKVRTLLPGRKADDVAYRCEECGEEVVKAVPRVW
Ga0182037_105340251	3300016404	Soil	QKPKSRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEECGSEVLRSVPRAW
Ga0182037_111346191	3300016404	Soil	VTTLQKPKSRLETHAPKCARCRTLMKVRILIPGRKVDDVAYR
Ga0182037_117307411	3300016404	Soil	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSE
Ga0182038_103325641	3300016445	Soil	VPPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDV
Ga0190266_102079191	3300017965	Soil	VRMVRAQDKPKSRLAAHAPQFARCRKPMKVRILLPGRKADDVIYRCEECGVDETRSSAEFAANGPM
Ga0184625_100609052	3300018081	Groundwater Sediment	MVRGQDKPKSRLAADAPQCARCRAPMKVRILFPGRKVDDVTYRCEQCGGEVEKPVPRAR
Ga0066662_122325591	3300018468	Grasslands Soil	VTPPQKPKSHLEAHAPQCARCRTLMKVRILIPRRKVDDVAYYRCEKCGGEVRQSVP
Ga0193728_10717531	3300019890	Soil	MVRAQDKPKSRLAADAPQCARCRAPMKVRILFPGRKVDDVTYRCEQCGGEVEKPVPRAR
Ga0210380_104719411	3300021082	Groundwater Sediment	MVRAQDKPKSRLAAHAPQCARCRPPMKVRILFPGRKVDDVTYRCEQCGGEVEKPVPRRRR
Ga0210406_104172493	3300021168	Soil	VTPQQKPKSRLEAHAPQCVRCKALMKVRILIPGRKVDDVSYRCEKM
Ga0210408_107463982	3300021178	Soil	VTPLQKPKSRLEAHAPQCARCRRLMKVRILFPDRKVDDV
Ga0210402_100438592	3300021478	Soil	VIPLKKPKSRLEAHAPQCVRCKALMKVRILIPGRKVDDVSYRCEKCGGEVIRSVPRAV
Ga0126371_114454102	3300021560	Tropical Forest Soil	VRLETHWPKCARCRTLMKERILIPGRKVVDVSYRCAKCGGQAIRSVPRG
Ga0126371_115109522	3300021560	Tropical Forest Soil	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVP
Ga0126371_119727171	3300021560	Tropical Forest Soil	VTPLQKPKSRLEAHAPKCARCKALMKVRILIPGRKVDDVAYRCEKCGSEILRSVPRAW
Ga0179591_12104707	3300024347	Vadose Zone Soil	VPPLKKPKSRLEAHAPQCVRCKAPMKVRILIPGRKVDDVAYRCEKCGSEVSLAVPR
Ga0207693_103926353	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTPLKKPKPRLEAHAPQCVRCKALMKVRILIPGRKVDDVSY
Ga0207664_101314593	3300025929	Agricultural Soil	VTPLKKPKPRLEAHAPQCVRCKALMKVRILIPGRKVDDVSYRCEKMLSVPRAV
Ga0209804_12080181	3300026335	Soil	VTPLQKPKSRLEAHAPQCARCKAIMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW
Ga0209689_13501321	3300027748	Soil	VTPLQKPKSRLEAHAPECARCKAFMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW
Ga0209382_109808141	3300027909	Populus Rhizosphere	VTPLKKPKPRLEAHAPQCVRCKALMKVRILIPGRKVDDVAYRCEKCGGEVMRS
Ga0307305_100545013	3300028807	Soil	MVRAQDKPKSRLAAHAPQCARCRAPMKVRILFPGRKVDDVTYRCEQCGGEVEKPVPRAR
Ga0307495_102226721	3300031199	Soil	MRPSMSRSNPIRPLAPPKNRLLAHAPQCSRCRTAMKVRTLLPGRKVDDVAYRCEECGEEVVREVPRAG
Ga0318541_101305414	3300031545	Soil	VPPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVAYR
Ga0318573_105337142	3300031564	Soil	VTPVQKPKRRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEECGSEVLRSVPRA
Ga0310915_100508703	3300031573	Soil	VPPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCGGQVMRSVPRAW
Ga0310915_105119671	3300031573	Soil	VTQLQKPKSRLEAHAPECGRCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVP
Ga0310915_106888322	3300031573	Soil	MTPLQKPKSRLETHAPNCARCRTLLKVRILIPGRKIDDVVYRCEKCQAEVMHSMPRAYPRLT
Ga0310915_107890681	3300031573	Soil	VTPVQKPKRRLEAHAPKCARCKALMKVRILIPGRKIDDVA
Ga0310915_108768821	3300031573	Soil	VIPLQKPKSRLEAHAPKCARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW
Ga0310915_112795642	3300031573	Soil	ETHAPKCARCRTLMKVRILIPGRKVDDVAYRCEKCGAEVMQSVPRAL
Ga0318542_102915111	3300031668	Soil	LETHAPKCARCRTLMKVRILIPGRKVDDVAYRCEKCGGQVMRSVPRAW
Ga0318542_106908861	3300031668	Soil	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRAW
Ga0318561_105786092	3300031679	Soil	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDD
Ga0318574_104974913	3300031680	Soil	VIPLQKPKSRLEAHAPKCARCKALMKVRILIPGRKVDDVAYRCEKCG
Ga0318496_105365621	3300031713	Soil	VTPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDLSYRCEKC
Ga0306917_100260072	3300031719	Soil	VTPLQKPKSRLEIHAPQCARCKALMKVHILIPGHKVDDVAYRCEKCGGQVVRSVPRAW
Ga0306917_102266131	3300031719	Soil	VPPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCGGQVMRSVP
Ga0306917_109067672	3300031719	Soil	VTQLQKPKSRLEAHAPECGRCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSV
Ga0318500_102566073	3300031724	Soil	VPPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCGSEVL
Ga0306918_100542846	3300031744	Soil	VIPLQKPKSRLEAHAPKCARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVPRGA
Ga0318502_102419861	3300031747	Soil	VTPLQKPKSRLEIHAPQCARCKALMKVHILIPGHKVDDVAYRCEKCGGQ
Ga0318537_100851232	3300031763	Soil	MLRERIVTPLQKPKSRLEAHAPQCARCKVLMKVRILIPGRKVDDVAYRCEKCGGEVMRSVSRAW
Ga0318546_100796113	3300031771	Soil	VTPLQKPKSRLEAHAPQCARCKVLMKVRILIPGRKVDDVAYRCEKCGGEVMRSVSRAW
Ga0318546_108348373	3300031771	Soil	VPPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCGG
Ga0318498_102525693	3300031778	Soil	VQKPKRRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEECGSEVLRSVPRAW
Ga0318548_101973631	3300031793	Soil	VTPVQKPKRRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEECGSEVLRSV
Ga0318576_105281531	3300031796	Soil	VTLLQKPKSHLETHAPKCARCRTLMKVRILIPGRKVNDVSYR
Ga0318565_103297492	3300031799	Soil	VIPLQKPKSRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEECGSEVLRSVPRAW
Ga0318511_101701533	3300031845	Soil	LIVAPLQKTKSRLEVHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCGSEILRCVPRAW
Ga0306919_100155541	3300031879	Soil	VAPLQKTKSRLEVHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCGSEILRCVPRAW
Ga0318544_102486541	3300031880	Soil	MLRERIVTPLQKPKSRLEAHAPQCARCKVLMKVRILIPGRKVDDVAYRCEK
Ga0306925_103872282	3300031890	Soil	VTTLQKPKSRLETHAPKCARCRMLMKMRILIPGRKVDDVAYRCEKCGGEVIRSVPRAG
Ga0306921_100587707	3300031912	Soil	VTPLQKPKSRLETHAPKCARCRTLMKVRILIPGRKVDDVSYRCEKCGAEVMQSVPRAW
Ga0306921_100818737	3300031912	Soil	VPPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCGGQVMRSVPRA
Ga0306921_119579011	3300031912	Soil	TLQKPKSRLETHAPKCARCRMLMKMRILIPGRKVDDVAYRCEKCGGEVIRSVPRAG
Ga0310913_105520953	3300031945	Soil	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVLR
Ga0310910_113394902	3300031946	Soil	VTTLQKPKSRLETHAPKCARCRMLMKMRILIPGRKVDDVAYRCE
Ga0310909_100282487	3300031947	Soil	VTPLQKPKSRLETHAPKCARCKALMKVRILIPGRKVDDVSYRCEKCGGEVMRFVPRAW
Ga0310909_105568483	3300031947	Soil	VTPVQKPKRRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEE
Ga0310909_116760021	3300031947	Soil	QKPKRRLEAHAPKCARCKALMKVRILIPGRKIDDVAYRCEECGSEVLRSVPRAW
Ga0318531_103475051	3300031981	Soil	VTLLQKPKSHLETHAPKCARCRTLMKVRILIPGRKVNDVSYRCEKCGG
Ga0306922_100813297	3300032001	Soil	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSV
Ga0306922_106362951	3300032001	Soil	VTQLQKPKSRLEAHAPECGRCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVSR
Ga0306922_117737841	3300032001	Soil	PKSRLETHAPKCARCRMLMKMRILIPGRKVDDVAYRCEKCGGEVIRSVPRAG
Ga0318549_105428041	3300032041	Soil	VTLLQKPKSHLETHAPKCARCRTLMKVRILIPGRKV
Ga0318533_100394411	3300032059	Soil	VTPLQKPKSRLEAHAPECARCKALMKVRILIPGRKVDDVAYRCEK
Ga0318533_111171862	3300032059	Soil	VTTLQKPKSRLETHAPKCARCRMLMKMRILIPGRKVDDVAYRCETCGGE
Ga0306924_104466341	3300032076	Soil	VTPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVSYRCEKCGGEVM
Ga0306924_126085291	3300032076	Soil	KPKSRLEAHAPKCGRCKALMKVRILIPGRKVDDVAYRCEKCGSEILRSVPRAW
Ga0318577_100972614	3300032091	Soil	VPPLQKPKSRLEAHAPQCARCKALMKVRILIPGRKVDDVAYRCE
Ga0318540_104327821	3300032094	Soil	RLEAHAPQCARCKALMKVRILIPGRKVDDVAYRCEKCGGQVMRSVPRAW
Ga0318540_104481051	3300032094	Soil	VTLLQKPKSHLETHAPKCARCRTLMKVRILIPGRKVNDVSYRCEKCGGEVLR
Ga0307471_1025517551	3300032180	Hardwood Forest Soil	VTPLKKPKPRLEAHAPQCVRCKALMKVRILIPGRKVDDVSYRCEKCGGEVIR
Ga0307472_1013954751	3300032205	Hardwood Forest Soil	VTPLKKPKPRLEAHAPQCVRCKALMKVRILIPGRKVDDVSYRCEKCGGEVIRSV
Ga0306920_1000116057	3300032261	Soil	VTQLQKPKSRLEAHAPECGRCKALMKVRILIPGRKVDDVAYRCEKCGSEVLRSVSRAW
Ga0306920_1000684081	3300032261	Soil	VTPLQKPKSRLETHAPKCARCRMLMKVRILIPGRKVDDVSYRCEKCGGEVMRSVPRAW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041413

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences