Metagenome / Metatranscriptome Family F041410

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041410
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	55 residues
Representative Sequence	IRDLKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Number of Associated Samples	144
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.90 %
% of genes near scaffold ends (potentially truncated)	96.88 %
% of genes from short scaffolds (< 2000 bps)	83.75 %
Associated GOLD sequencing projects	138
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.625 % of family members)
Environment Ontology (ENVO)	Unclassified (34.375 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.625 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.75% β-sheet: 7.41% Coil/Unstructured: 72.84%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF13469	Sulfotransfer_3	24.53
PF00224	PK	11.32
PF00551	Formyl_trans_N	5.03
PF13810	DUF4185	3.14
PF07606	DUF1569	3.14
PF00912	Transgly	1.89
PF01636	APH	1.89
PF01522	Polysacc_deac_1	1.26
PF04015	DUF362	1.26
PF13649	Methyltransf_25	1.26
PF02597	ThiS	0.63
PF14532	Sigma54_activ_2	0.63
PF04073	tRNA_edit	0.63
PF13480	Acetyltransf_6	0.63
PF07993	NAD_binding_4	0.63
PF01757	Acyl_transf_3	0.63
PF02563	Poly_export	0.63
PF13396	PLDc_N	0.63
PF13701	DDE_Tnp_1_4	0.63
PF13011	LZ_Tnp_IS481	0.63
PF13489	Methyltransf_23	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	11.32
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	1.89
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	1.89
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	1.89
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.26
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	1.26
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.63
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.38 %
Unclassified	root	N/A	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	44.38 %
Unclassified	root	N/A	7.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.25 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.25 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.38 %
Unclassified	root	N/A	7.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.75 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.25 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.62 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.62 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.38 %
Unclassified	root	N/A	7.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.75 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.25 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.62 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	0.62 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.38 %
Unclassified	root	N/A	7.50 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	3.75 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.25 %
Thalassomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas	0.62 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.62 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.38 %
Unclassified	root	N/A	7.50 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	3.75 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.25 %
Thalassomonas actiniarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas → Thalassomonas actiniarum	0.62 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.62 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.62 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10185545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300001154\|JGI12636J13339_1014494	All Organisms → cellular organisms → Bacteria → Acidobacteria	1170	Open in IMG/M
3300001356\|JGI12269J14319_10084780	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300002245\|JGIcombinedJ26739_100744768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300002907\|JGI25613J43889_10097090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300003220\|JGI26342J46808_1035749	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300004092\|Ga0062389_100882923	All Organisms → cellular organisms → Bacteria → Acidobacteria	1076	Open in IMG/M
3300005178\|Ga0066688_10692485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005436\|Ga0070713_101649929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300006052\|Ga0075029_100632168	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300006052\|Ga0075029_100673049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300006055\|Ga0097691_1133023	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300006102\|Ga0075015_100148862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1216	Open in IMG/M
3300006102\|Ga0075015_100906672	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300006172\|Ga0075018_10292073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300006173\|Ga0070716_101677574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300006797\|Ga0066659_10899386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300006864\|Ga0066797_1022178	All Organisms → cellular organisms → Bacteria	2215	Open in IMG/M
3300007255\|Ga0099791_10466237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300007788\|Ga0099795_10347267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300009088\|Ga0099830_11388367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300009089\|Ga0099828_10090642	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300009089\|Ga0099828_11182701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300009519\|Ga0116108_1148249	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300009520\|Ga0116214_1284121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300009521\|Ga0116222_1117315	Not Available	1146	Open in IMG/M
3300009547\|Ga0116136_1171758	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300009623\|Ga0116133_1005357	All Organisms → cellular organisms → Bacteria	3237	Open in IMG/M
3300009630\|Ga0116114_1046859	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300009631\|Ga0116115_1154764	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009634\|Ga0116124_1183904	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300009644\|Ga0116121_1152063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300009683\|Ga0116224_10033075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2539	Open in IMG/M
3300009683\|Ga0116224_10251117	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300009839\|Ga0116223_10106316	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1771	Open in IMG/M
3300009839\|Ga0116223_10875053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010343\|Ga0074044_10951031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300010379\|Ga0136449_100234350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3433	Open in IMG/M
3300010379\|Ga0136449_100234350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3433	Open in IMG/M
3300010379\|Ga0136449_100852319	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300010379\|Ga0136449_102978095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300011271\|Ga0137393_10004760	All Organisms → cellular organisms → Bacteria → Proteobacteria	8899	Open in IMG/M
3300012096\|Ga0137389_10132236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas → Thalassomonas actiniarum	2024	Open in IMG/M
3300012096\|Ga0137389_11558899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012189\|Ga0137388_10044250	All Organisms → cellular organisms → Bacteria	3570	Open in IMG/M
3300012203\|Ga0137399_11391726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012203\|Ga0137399_11731703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300012208\|Ga0137376_10223096	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300012363\|Ga0137390_10879487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300012469\|Ga0150984_114022507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300012685\|Ga0137397_11264664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012917\|Ga0137395_10463635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300012927\|Ga0137416_10210374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1566	Open in IMG/M
3300012927\|Ga0137416_12213321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300014156\|Ga0181518_10070197	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300014158\|Ga0181521_10106362	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300014159\|Ga0181530_10131514	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300014654\|Ga0181525_10125766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1411	Open in IMG/M
3300014838\|Ga0182030_10252974	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300016702\|Ga0181511_1485173	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300016750\|Ga0181505_10068963	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300017822\|Ga0187802_10073831	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300017928\|Ga0187806_1388247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300017931\|Ga0187877_1333365	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300017938\|Ga0187854_10039258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2434	Open in IMG/M
3300017943\|Ga0187819_10872153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300017975\|Ga0187782_11366748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300017995\|Ga0187816_10460886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300018001\|Ga0187815_10070841	All Organisms → cellular organisms → Bacteria → Acidobacteria	1466	Open in IMG/M
3300018003\|Ga0187876_1268204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300018015\|Ga0187866_1181253	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300018016\|Ga0187880_1262348	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300018017\|Ga0187872_10499510	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300018019\|Ga0187874_10372311	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300018023\|Ga0187889_10108977	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300018024\|Ga0187881_10274773	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300018030\|Ga0187869_10061089	All Organisms → cellular organisms → Bacteria → Proteobacteria	1964	Open in IMG/M
3300018033\|Ga0187867_10603530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	600	Open in IMG/M
3300018033\|Ga0187867_10827186	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300018040\|Ga0187862_10827712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300018062\|Ga0187784_10016906	All Organisms → cellular organisms → Bacteria → Acidobacteria	5889	Open in IMG/M
3300018088\|Ga0187771_10410168	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300019278\|Ga0187800_1069091	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300019787\|Ga0182031_1479473	All Organisms → cellular organisms → Bacteria	2069	Open in IMG/M
3300019789\|Ga0137408_1223461	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300020199\|Ga0179592_10216730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300020581\|Ga0210399_10318461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300021086\|Ga0179596_10443104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300021168\|Ga0210406_10666765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300021171\|Ga0210405_10900281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300021171\|Ga0210405_11364000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300021181\|Ga0210388_10218136	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300021405\|Ga0210387_11064793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300021433\|Ga0210391_10280411	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300021477\|Ga0210398_10391316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1133	Open in IMG/M
3300021478\|Ga0210402_11842254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300024227\|Ga0228598_1000593	All Organisms → cellular organisms → Bacteria	7608	Open in IMG/M
3300025404\|Ga0208936_1047907	Not Available	579	Open in IMG/M
3300025453\|Ga0208455_1114634	Not Available	500	Open in IMG/M
3300025484\|Ga0208587_1070532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300025527\|Ga0208714_1043462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	999	Open in IMG/M
3300025579\|Ga0207927_1060634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300025939\|Ga0207665_11374671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300026456\|Ga0255351_1003616	All Organisms → cellular organisms → Bacteria	5259	Open in IMG/M
3300026480\|Ga0257177_1004156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1693	Open in IMG/M
3300026494\|Ga0257159_1029469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300026551\|Ga0209648_10091843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2508	Open in IMG/M
3300027370\|Ga0209010_1087898	Not Available	530	Open in IMG/M
3300027535\|Ga0209734_1118958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300027590\|Ga0209116_1064524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300027591\|Ga0209733_1015251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2056	Open in IMG/M
3300027629\|Ga0209422_1074223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300027641\|Ga0208827_1105203	Not Available	833	Open in IMG/M
3300027738\|Ga0208989_10093644	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300027795\|Ga0209139_10343192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	523	Open in IMG/M
3300027846\|Ga0209180_10159354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300027854\|Ga0209517_10073938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2405	Open in IMG/M
3300027854\|Ga0209517_10175657	All Organisms → cellular organisms → Bacteria → Acidobacteria	1345	Open in IMG/M
3300027862\|Ga0209701_10007254	All Organisms → cellular organisms → Bacteria	7223	Open in IMG/M
3300027875\|Ga0209283_10047471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2726	Open in IMG/M
3300027903\|Ga0209488_10161096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1695	Open in IMG/M
3300028552\|Ga0302149_1000216	All Organisms → cellular organisms → Bacteria	18947	Open in IMG/M
3300028566\|Ga0302147_10298879	Not Available	534	Open in IMG/M
3300028665\|Ga0302160_10088943	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300028674\|Ga0302161_10157398	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300028678\|Ga0302165_10144621	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300028747\|Ga0302219_10237502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	706	Open in IMG/M
3300028748\|Ga0302156_10302994	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300028762\|Ga0302202_10363120	Not Available	681	Open in IMG/M
3300028780\|Ga0302225_10172520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1045	Open in IMG/M
3300029817\|Ga0247275_1075642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	917	Open in IMG/M
3300029943\|Ga0311340_10851300	Not Available	763	Open in IMG/M
3300029944\|Ga0311352_10540342	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300029951\|Ga0311371_10614917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1392	Open in IMG/M
3300030000\|Ga0311337_10520446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300030011\|Ga0302270_10566235	Not Available	586	Open in IMG/M
3300030019\|Ga0311348_10168355	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300030052\|Ga0302217_10150224	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300030057\|Ga0302176_10105242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1105	Open in IMG/M
3300030494\|Ga0310037_10320858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300030494\|Ga0310037_10439099	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031233\|Ga0302307_10218336	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300031715\|Ga0307476_11180216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300031718\|Ga0307474_10351713	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300031722\|Ga0311351_10285295	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300031754\|Ga0307475_10222911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1509	Open in IMG/M
3300031788\|Ga0302319_10053215	All Organisms → cellular organisms → Bacteria → Proteobacteria	6465	Open in IMG/M
3300031962\|Ga0307479_10958269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300032205\|Ga0307472_101419567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300032205\|Ga0307472_102426337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032515\|Ga0348332_11484318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300032782\|Ga0335082_11332226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300032805\|Ga0335078_12583193	Not Available	521	Open in IMG/M
3300032954\|Ga0335083_10319304	All Organisms → cellular organisms → Bacteria → Acidobacteria	1357	Open in IMG/M
3300033405\|Ga0326727_10662714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300033977\|Ga0314861_0271360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300033983\|Ga0371488_0075757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1950	Open in IMG/M
3300034065\|Ga0334827_016411	All Organisms → cellular organisms → Bacteria	3146	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.75%
Host-Associated	Host-Associated	1.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.12%
Aquatic	Environmental → Aquatic	25.62%
Plants	Host-Associated → Plants	1.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.88%
Freshwater	Environmental → Aquatic → Freshwater	22.50%
Peat	Environmental → Terrestrial → Peat	15.62%
Sediment	Environmental → Aquatic → Sediment	3.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.25%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.50%
Loam	Environmental → Terrestrial → Soil → Loam	6.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.12%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.12%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.88%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.00%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.12%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.75%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.50%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.25%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.25%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.25%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.25%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.62%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028674	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_1	Environmental	Open in IMG/M
3300028678	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030052	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101855451	3300000567	Peatlands Soil	GNMIVSSVEAAGIRELKGTISKNPRLCHEKEQGCQGKSPGAGAASDGRDVGADVDGVEAAIAGVE*
JGI12636J13339_10144942	3300001154	Forest Soil	SPEAAGIRDLKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE*
JGI12269J14319_100847803	3300001356	Peatlands Soil	AGIRDLKGVIGKDPRLCHAKGPGCSKASPGAGAASDGRDVGADIDAVEAAIAGVE*
JGIcombinedJ26739_1007447682	3300002245	Forest Soil	GTVVVSSAEAAGIKDFKDGVSRDARLCHAKEPGCSKVSPGAGAATDGKDIGADVDALEAALAGVQ*
JGI25613J43889_100970901	3300002907	Grasslands Soil	KGNITVLSSEEAGIRDLKGTIAKDPRVCHAKGPGCPKVSPGVAAASDGRDLGADIDAVETAIAGVE*
JGI26342J46808_10357492	3300003220	Bog Forest Soil	SSAAGIRDLKDTVSKDPRLCHAKDAGCSKPSPGAGAASDGRDMGADVDAVEAAIAGVE*
Ga0062389_1008829232	3300004092	Bog Forest Soil	IIVPSAEAAGIRDLTGTVSKDPSLCHEKGPGCPRKSPGAGAASDGRDIGADVAGVEAAIEGVE*
Ga0066688_106924851	3300005178	Soil	KDPRLCHEKGPGCSKVSPGAGAASDGRDLGADIDSIEAAIAGVE*
Ga0070713_1016499291	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KDPRLCHEKGPGCPKISPGAGAASDGRDLGADIDAVEAAIAGVE*
Ga0075029_1006321681	3300006052	Watersheds	ISKDPRLCHAKGLGCSKVSPGAAAASDGRDLGADIDAIETAIAGVE*
Ga0075029_1006730492	3300006052	Watersheds	KDPRLCHEKGPNCPKKSPGAGAADGRDLGADVDAVEAAIAGVE*
Ga0097691_11330232	3300006055	Arctic Peat Soil	PRLCRAKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE*
Ga0075015_1001488621	3300006102	Watersheds	VKSGMSKDPRLCHEKGPNCPKKSPGAGAADGRDLGADVDAVEAAIAGVE*
Ga0075015_1009066722	3300006102	Watersheds	IRDLKDAISKDPRLCHAKGLGCSKVSPGAAAASDGRDLGADIDAIETAIAGVE*
Ga0075018_102920731	3300006172	Watersheds	VVDSAEAAGVRDLKDNISKDPRLCHAKGPGCSKVSPGVGAASDGRDLGADIDGLEAAIAGVE*
Ga0070716_1016775742	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DLKNGVSKDPRLCHEKGPGCPKISPGAGAASDGRDLGADIDAVEAAIAGVE*
Ga0066659_108993861	3300006797	Soil	AAGVRDLKNGVSKDPKLCHEKGPGCPKVSPGVGAASDGRDLGADINAVEAAIAGVE*
Ga0066797_10221784	3300006864	Soil	GIRDLKDAVSKDPRRCHAKGPGCNKASPEAAAASDGRDLGADIDAVEAAIAGME*
Ga0099791_104662371	3300007255	Vadose Zone Soil	SKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEGAIAGVE*
Ga0099795_103472672	3300007788	Vadose Zone Soil	SGTITPSEGSAAIRELKNGVSRDPRLCRDKSAGCAKISPGAGAGSDGKDLGADVDAVEAAIAGVE*
Ga0099830_113883672	3300009088	Vadose Zone Soil	EAAGIRDLKDTVSKNPRLCHAKGPGCAKASPGAGAASDGRDLGADIDAVEAAIAGVE*
Ga0099828_100906424	3300009089	Vadose Zone Soil	PSGTIVVSPGSAGIRDLKDGISRDPRLCREKGPGCSKPSPGTASAADGKDLGADVDAIEAAIAGVE*
Ga0099828_111827012	3300009089	Vadose Zone Soil	PSGTIVVSPGSAGIRDLKDGISRDPRLCREKGPGCSKPSPGAASAADGKDLGADVDAVEAAISGVE*
Ga0116108_11482491	3300009519	Peatland	IVVGSAQAAGIRDLKDVIGKDPRLCHAKGPGCAKASPGAGAASDGGDLGADIDAVEAAIAGVE*
Ga0116214_12841211	3300009520	Peatlands Soil	KDVIAKDPRLCHAKGPGCAKASPGAGAASDGGDLGADIDAVEAAIAGVE*
Ga0116222_11173151	3300009521	Peatlands Soil	KDPRLCHAKGPGCAKASPGAGAASDGSDLGADIDAVEAAIAGVE*
Ga0116136_11717581	3300009547	Peatland	AAGIRDLKDVIAKDPRLCHAKGPGCAKASPGAGAASDGGDLGADIDAVEAAIAGVE*
Ga0116133_10053574	3300009623	Peatland	SDPRLCHEKGPGCHKKSPGVAAASDGRDLGADVDAVEAAIAGVE*
Ga0116114_10468591	3300009630	Peatland	AAGIRDLKDGIAKDPRLCHAKGPGCSKASPGAGAASDGRDLGADIDEVEAAIAGVE*
Ga0116115_11547641	3300009631	Peatland	DLKDVIAKDPRLCHAKGPGCAKASPGAGAASDGGDLGADIDAVEAAIAGVE*
Ga0116124_11839041	3300009634	Peatland	ISSDPRLCHEKGPGCHKRSPGVAAASDGRDMGADVDAVEAAIAGVE*
Ga0116121_11520631	3300009644	Peatland	IVSNREAAGIRDLKGTISKDPRLCHEKGPGCAGKSPGAGAASDGRDMGADIDGLEAALAGVE*
Ga0116224_100330751	3300009683	Peatlands Soil	IRDLKDAVSKNPRLCHAKGTGCSKVSPGAGAGSDGRDLGADIDAVEAAIAGVE*
Ga0116224_102511172	3300009683	Peatlands Soil	CHAKGPGCAKASPGAGAASDGSDLGADIDAVEAAIAGVE*
Ga0116223_101063163	3300009839	Peatlands Soil	REEGSSCKKKSPFAGAGSDGKDLGADVDAVRAATEGVE*
Ga0116223_108750531	3300009839	Peatlands Soil	NMIVSSVEAAGIRELKGTISKNPRLCHEKEQGCQGKSPGAGAASDGRDVGADVDGVEAAIAGVE*
Ga0074044_109510311	3300010343	Bog Forest Soil	IRDFKDGVSKDPRLCHTGTPGCGKASPGASVATDGKDIGVDVDALEAAIAGVE*
Ga0136449_1002343501	3300010379	Peatlands Soil	FPKGNMTVGSPEAAGIRDLKDTISKDPRLCHAKGPGCPKVSAGVGAASDGRDLGADIDAVEAAIAGVE*
Ga0136449_1002343504	3300010379	Peatlands Soil	VSSCDGATIGWAVVGGIRDLKDVISKDPRLCHAKGPGCSKVSPGAGAASDGRDVGTDIDMIEAAIAGEE*
Ga0136449_1008523191	3300010379	Peatlands Soil	DPRLCHEKGPGCDKKSPGAAAATDGRDMGADVDAVEAAVAGVE*
Ga0136449_1029780952	3300010379	Peatlands Soil	NAEAAGIRELTGTTSKDPRLCRDKGPGCPRKSPGAGAAQDGRDVGADVDAVEAAIAGVE*
Ga0137393_100047609	3300011271	Vadose Zone Soil	IRDLKNGVSKDPRLCHEKGPGCPKVSPGAGSASDGRDLGADIDSVEAAIAGVE*
Ga0137389_101322363	3300012096	Vadose Zone Soil	GISRDPRLCREKGPGCSKPSPGAASAADGKDLGADVDAVEAAIAGVE*
Ga0137389_115588991	3300012096	Vadose Zone Soil	VGSAEAAGIRDLKDDAVSKDPKLCRTKGPGCAKVSPGAGAASDGRDLGANIDGLDTAIAGVE*
Ga0137388_100442501	3300012189	Vadose Zone Soil	DPRLCREKGPGCSKPSPGTASAADGKDLGADVDAVEAAISGVE*
Ga0137399_113917261	3300012203	Vadose Zone Soil	NPRLCRDKSAGCPKASPGAGAGSDGKDLGADVDAVEAAIAGVE*
Ga0137399_117317031	3300012203	Vadose Zone Soil	GNIVVGSPEAAGVRDLKNGVRKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEGAIAGVE*
Ga0137376_102230963	3300012208	Vadose Zone Soil	AVSDKAAGIRDLKEGVSRDPKLCREKGPGCAKASPGAGAAAGGSDLGADVDAVEAAIAGVE*
Ga0137390_108794872	3300012363	Vadose Zone Soil	VVGSPEAAGIRDLKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE*
Ga0150984_1140225072	3300012469	Avena Fatua Rhizosphere	AAIRELKDGVSRNPRLCRDKSAGCAKTSPGAGAATDGKDLGADVDALEAAIAGVE*
Ga0137397_112646642	3300012685	Vadose Zone Soil	KDGVSRDPRLCREKGPGCAKASPGVGAAAGGGDLGADVDAVEAAIAGVE*
Ga0137395_104636352	3300012917	Vadose Zone Soil	PKGNIVVGSPEAAGIRDLKDGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE*
Ga0137416_102103741	3300012927	Vadose Zone Soil	IVVGSPEAVGVRDLKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEGAIAGVE*
Ga0137416_122133211	3300012927	Vadose Zone Soil	KGNIVVGSPEAAGIRDLKNGVSKDPRLCHAKGPGCPKVSPGAGAAGDGRDLGADIDSVEAAIAGVE*
Ga0137404_118094752	3300012929	Vadose Zone Soil	RGRWPSGTIVVSAGGAGIRDLKDGVSRDPRLCREKGAGCSKPSPGASAAEGKDLGADVDAVEAAIAGVE*
Ga0181518_100701974	3300014156	Bog	GSFPKGNIVVGSPEAAGIRDLKDGIAKDPRLCHAKGPGCSKASPGAGAASDGRDLGADIDVVEAAIAGVE*
Ga0181521_101063621	3300014158	Bog	GNITVGSAEAAGIRNLKDTVSKDPRLCHAKGPGCAKASPGAGAASDGRDLGADIDAVEAAIAGVE*
Ga0181530_101315141	3300014159	Bog	RDLKDGIAKDPRLCHAKGPGCSKASPGAGAASDGRDLGADIDAVEAAIAGVE*
Ga0181525_101257662	3300014654	Bog	CRAKGPGCPKVSPGARAASDGRDLGADIDAVEAAIAGVE*
Ga0182030_102529741	3300014838	Bog	KDARLCHAKAGGCSKVSPGAGAASDGRDMGADIDAVEAAIAGVE*
Ga0181511_14851733	3300016702	Peatland	SAEAAGIRNLKDTVSKDPRLCHAKGPGCAKASPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0181505_100689631	3300016750	Peatland	SIAKDPRLCHAKGPGCSKASPGAGAASDGRDLGADIDAIEAAIAGVE
Ga0187802_100738311	3300017822	Freshwater Sediment	DAVSKDPRLCHAKGPGCSKVSPGAGAASDGRDVGADIDAVEAAIAGVE
Ga0187806_13882471	3300017928	Freshwater Sediment	RLCHEKGPNCPKKSPGAGAADGRDLGADVDAVEAAIAGVE
Ga0187877_13333652	3300017931	Peatland	GVHDLKDGISSDPRLCHEKGPGCHKRSPGVAAASDGRDMGADVDAVEAAIAGVE
Ga0187854_100392581	3300017938	Peatland	NHGRWPAGTITASSPQDAGIRDYKDGIGKDARLCRAKGPGCGKKSPGAGADEGRDLGADIDAIDAALAGVE
Ga0187819_108721532	3300017943	Freshwater Sediment	GIITASSAEAAGIRDLKNGVSSDPRLCHEKGPNCPKKSPGAGAADGRDLGADVDAVEAAIAGVE
Ga0187782_113667482	3300017975	Tropical Peatland	HDLKDRASDDPRLCLAKGPGCSKKSPGVGAASDGRDIGADVDAVEAAIAGVE
Ga0187816_104608861	3300017995	Freshwater Sediment	TDSIGKDPRLCRAKGPGCPKPSPGAGAASDGRDLGADIDAVAAAIAGVE
Ga0187815_100708411	3300018001	Freshwater Sediment	IVVGSAQAAGIRDLKDLIAKDPRLCHAKGPGCAKASPGAGAASDGGDLGADIDSVEAAIAGVE
Ga0187876_12682042	3300018003	Peatland	KAAGIRDLQNGVSKDPRLCHTNTLGCSKASPGASAAMDGKDIGADVDAIDAALAGVD
Ga0187866_11812532	3300018015	Peatland	GRWPAGTITASSPQGAGIRDYKNGISKDPRLCHEKGPGCGKKSPGAGADDGRDLGADVDAVDAALAGVE
Ga0187880_12623482	3300018016	Peatland	DLKDGIAKDPRLCHAKGPGCSKASPGAGAASDGRDLGADIDVVEAAIAGVE
Ga0187872_104995101	3300018017	Peatland	GRGSFPKGNTAVGSPEAAGIRDLKDTVGKDPRLCHAKGPGCSKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0187874_103723112	3300018019	Peatland	ENTIVASPEDLGVHDLKDGISSDPRLCHEKGPGCHKKSPGVAAASDGRDLGADVDAVEAAIAGVE
Ga0187889_101089771	3300018023	Peatland	EAAGIRDLKDGIAKDPRLCHAKGPGCSKASPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0187881_102747731	3300018024	Peatland	AAGIRDLKDVIAKDPRLCHAKGPGCAKASPGAGAASDGGDLGADIDAVEAATAGVE
Ga0187869_100610893	3300018030	Peatland	AGIRDLKDTVGKDPRLCHAKGPGCSKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0187867_106035302	3300018033	Peatland	FPKGNFIVGSPGAAGIRDLKDAISKDPRLCHAKRPGCSKVSPGAGVASDGRDLGADIDAIEAAIAGVE
Ga0187867_108271862	3300018033	Peatland	FPKGNIVVGSPEAAGIRDLKDGIAKDPRLCHAKGPGCSKASPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0187862_108277122	3300018040	Peatland	KGTISKDPRLCHEKGPGCAGKSPGAGAASDGRDMGADIDGLNAALAGVE
Ga0187784_100169061	3300018062	Tropical Peatland	VAKDPRLCHTREPGCSKVSPGAGAASDGRDLGADIDAIEAALAGVE
Ga0187771_104101681	3300018088	Tropical Peatland	GNIVVGSAQAAGIRDLKDVIAKDPRLCHAKGSGCAKASPGAGAASDGGDLGADIDAVEAAIAGVE
Ga0187800_10690911	3300019278	Peatland	GGWPHGTIVVGSTEAAGLRDVKKGVAKDARLCHAKEEGCNKPSPGAGAASDGRDIGADIEGLEAALAGVE
Ga0182031_14794734	3300019787	Bog	LFASPEDLGVHDLKDGISSDPRLCHEKGPGCHKKSPGVAAASDGRDLGADVDAVEAAIAGVE
Ga0137408_12234612	3300019789	Vadose Zone Soil	WPSGTIAVSDKAAGIRDLKEGVSRNPRLCREKGPGCAKASPGAGAAASGSDLGADVDAVEAAIAGVE
Ga0179592_102167302	3300020199	Vadose Zone Soil	DLKDAVSKDPKLCRTKGPGCAKVSPGAGAASDGRDLGADIDGLDTAIAGVE
Ga0210399_103184611	3300020581	Soil	SPEAAGIRDLKDGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDSLEAAIAGVE
Ga0179596_104431042	3300021086	Vadose Zone Soil	VSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0210406_106667652	3300021168	Soil	IVVGSPEAAGIRDLKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0210405_109002812	3300021171	Soil	KGNITVSSPEAAGIRDLKGTVAKDPRPCHTKEPGCPKASPGAAAASDGRDLGADIDAIEAAIAGVE
Ga0210405_113640001	3300021171	Soil	PEAAGIRDLKDGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDSLEAAIAGVE
Ga0210388_102181364	3300021181	Soil	HEKGGGCSKKSPGAGAASDGRDEGADVDAVEAATAGVE
Ga0210387_110647932	3300021405	Soil	LVSSADAAGITDLKGTVSKNPRLCRDKGPGCARKSPGAAGASDGRDVGADIDAVEAAVDGVE
Ga0210391_102804111	3300021433	Soil	KEAGIRDLQNGESKDPRLCHANTPGCRKASPGASAASNGKDIGADVDSVETAIAGVE
Ga0210398_103913161	3300021477	Soil	VSKDPRLCHAKTAGCGKASPGASAATDGTDIGADVDAVDAAIAGVE
Ga0210402_118422541	3300021478	Soil	GVRDLKDGIAKDPRLCHEKGDGCNKRSPGAAAASDGKDMGADVDAVEAAIAGVE
Ga0228598_10005936	3300024227	Rhizosphere	DLQGGVSKDPRLCHAKTAGCGKASPGASAATDGTDIGADVDAVDAAIAGVE
Ga0208936_10479071	3300025404	Peatland	KDARLCHAKAGGCSKVSPGAGAASDGRDMGADIDAVEAAIAGVE
Ga0208455_11146341	3300025453	Peatland	GIRDLKDAISKDPRLCHAKGPGCSKVSPGAGVASDGRDLGADIDAIEAAIAGVE
Ga0208587_10705322	3300025484	Arctic Peat Soil	VSKDPRLCHAKGPGCPKVSPGAAAASDGRDLGADIDAIESAIAGVE
Ga0208714_10434622	3300025527	Arctic Peat Soil	GIRDLKDNVSKDPRLCHAKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0207927_10606341	3300025579	Arctic Peat Soil	LKDAVSKDPRLCHTKGPGCNKVSPGAGAASDGRDLGADIDAVETAIAGVE
Ga0207665_113746712	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RDLKNGVSKDPRLCHEKGPGCPKISPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0255351_10036161	3300026456	Soil	DGISSDPRLCHEKGPGCHKRSPGVAAASDGRDLGADVDAVEAAIAGVE
Ga0257177_10041562	3300026480	Soil	LKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDSVEAAIAGVE
Ga0257159_10294691	3300026494	Soil	EKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0209648_100918434	3300026551	Grasslands Soil	HEKGPGCNHASPGAAAATDGRDLGADIDALEAAIAGVE
Ga0209010_10878982	3300027370	Forest Soil	LPKRNITVSSPEAAGIRDLKNTISKDPRLCRAKGPGCPKVSPGTHAAFDGRDLGADIDAVEAAVAGVE
Ga0209734_11189581	3300027535	Forest Soil	TVSSPEGAGIRDLKGTVSKDPRPCHAKGPGCPKASPGVGAASDGRDLGADIDAVEAAIAGVE
Ga0209116_10645241	3300027590	Forest Soil	SSAEAAGIRDFKDGVAKDPRLCHAKESGCNKVSPGAGSATDGKDLGVDVDALDAALAGVE
Ga0209733_10152513	3300027591	Forest Soil	EAAGIRDLKNGISKDPRLCHEKGPGCNHASPGAAAASDGRDLGADIDAVEAAIAGVE
Ga0209422_10742232	3300027629	Forest Soil	RLCHEKEPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0208827_11052031	3300027641	Peatlands Soil	DPRLCHAKGPGCAKASPGAGAASDGSDLGADIDAVEAAIAGVE
Ga0208989_100936442	3300027738	Forest Soil	LCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0209139_103431921	3300027795	Bog Forest Soil	AKDARLCSAKGSGCSKASPGAGAGSDGRDLGADIDAIETAIAGVE
Ga0209180_101593542	3300027846	Vadose Zone Soil	IRDLKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDAVEAAIAGVE
Ga0209517_100739381	3300027854	Peatlands Soil	VGGIRDLKDVISKDPRLCHAKGPGCSKVSPGAGAASDGRDVGTDIDMIEAAIAGEE
Ga0209517_101756571	3300027854	Peatlands Soil	GWPKGNMIVSSVEAAGIRELKGTISKNPRLCHEKEQGCQGKSPGAGAASDGRDVGADVDGVEAAIAGVE
Ga0209701_100072547	3300027862	Vadose Zone Soil	DPRLCHEKGPGCPKVSPGAGSASDGRDLGADIDSVEAAIAGVE
Ga0209283_100474711	3300027875	Vadose Zone Soil	SPEAAGIRDLKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDSVEAAIAGVE
Ga0209488_101610961	3300027903	Vadose Zone Soil	GIRDLKDGVSKDPRLCHEKGPGCPKVSPGVGAASDGRDLGADINAVEAAIAGVE
Ga0302149_10002161	3300028552	Bog	PEDLGVHDLKDGISSDPRLCHEKGPGCHKRSPGVAAASDGRDLGADVDAVEAAIAGVE
Ga0302147_102988792	3300028566	Bog	WPPENTIVASPEDLGVHDLKDGISSDPRLCHEKGPGCHKKSPGVAAASDGRDLGADVDAVEAAIAGVE
Ga0302160_100889431	3300028665	Fen	SPEAAGFRDLKDGISADPRLCRAKGSNCAKVSPGTGAASGGRDLGADVDAVEAAIAGVE
Ga0302161_101573981	3300028674	Fen	PKGNVTVGNPRDLGVRDLKDGIAKDPRLCQEKGPGCNKKSPGAGAASDGRDMGADVDAVDAAVAGIE
Ga0302165_101446212	3300028678	Fen	RLCQEKGPGCNKKSPGAGAASDGRDMGADVDAVDAAVAGIE
Ga0302219_102375021	3300028747	Palsa	GIHDLKGTITKDPRLCHAKGPGCSKVSPGAGAASDGRDVGADIDAVEAAIAGVE
Ga0302156_103029941	3300028748	Bog	ERLSGGWPPENTIVASPEDLGVHDLKDGISSDPRLCHEKGPGCHKKSPGVAAASDGRDLGADVDAVEAAIAGVE
Ga0302202_103631201	3300028762	Bog	KGNITVGSAEAAGIRNFDPKEDASQDPRLCHAKGPGCSKASPGAGTASDGRDLGADIDAVEAAIAGVE
Ga0302225_101725202	3300028780	Palsa	AGSPEAAGIHDLKGTITKDPRLCHAKGPGCSKVSPGAGAASDGRDVGADIDAVEAAIAGV
Ga0247275_10756422	3300029817	Soil	QRSKLCHTKGPGCSKVSPGAGVASDGRDLGADIDAIEAAIAGVE
Ga0311340_108513002	3300029943	Palsa	ISKDPRLCHAKGPGCSKVSPGADAGSDGRDLGADIDAIEAAIAGVE
Ga0311352_105403421	3300029944	Palsa	RAYKDGISQDPRLCHEKGPGCEKKSPGAGADDGRDLGADIDAIDAALAGVE
Ga0311371_106149171	3300029951	Palsa	LKGTITKDPRLCHAKGPGCSKVSPGAGAASDGRDVGADIDAVEAAIAGVE
Ga0311337_105204462	3300030000	Fen	DGITRNARLCRDKSAGCSKTSPGAGAASDGQDIGADVDAVEAAITGVE
Ga0302270_105662351	3300030011	Bog	REFDSKEGASKDARLCHAKAGGCSKVSPGAGAASDGRDMGADIDAVEAAIAGVE
Ga0311348_101683553	3300030019	Fen	FRDLKDGISADPRLCRAKGSNCAKVSPGAGAASGGRDLGADVDAVEAAIAGVE
Ga0302217_101502241	3300030052	Fen	PEAAGFRDLKDGISADPRLCRAKGSNCAKVSPGAGAASGGRDLGADVDAVEAAIAGVE
Ga0302176_101052422	3300030057	Palsa	PEAAGIHDLKGTITKDPRLCHAKGPGCSKVSPGAGAASDGRDVGADIDAVEAAIAGVE
Ga0310037_103208582	3300030494	Peatlands Soil	AAGIRDLKDAVSKDPRLCHAKGPGCNKVSPGAAAASDGRDLGADIDAVEAAIAGVE
Ga0310037_104390992	3300030494	Peatlands Soil	PEAAGIRDLKGTIGKDPRLCHAKGPGCSKVSPGAGAGSDGRDLGADIDAIEAAIAGVD
Ga0311356_106087822	3300030617	Palsa	KGPGCEKKSPGAGADDGRDLGADIDAIDAALAGVE
Ga0302307_102183361	3300031233	Palsa	ISKNPRLCHEKDPGCSRKSPGADAASDGRDIGADVEGVEAAIKGVE
Ga0307476_111802162	3300031715	Hardwood Forest Soil	DLKNGISKDPRLCHEKGPGCAKISSGVGAASDGRDLGADIDAVEAAIAGVE
Ga0307474_103517131	3300031718	Hardwood Forest Soil	KGGGCSKKSPGAGAASDGRDEGADVDAVEAATAGVE
Ga0311351_102852951	3300031722	Fen	KDGIAKDPRLCQEKGPGCNKKSPGAGAASDGRDMGADVDAVDAAVAGIE
Ga0307475_102229112	3300031754	Hardwood Forest Soil	KGNIGVGSPEAAGIRDLKNGVSKDPRLCHEKGPGCPKVSPGAGAASDGRDLGADIDSVEAAIAGVE
Ga0302319_100532158	3300031788	Bog	EDLGVHDLKDGISSDPRLCHEKGPGCHKKSPGVAAASDGRDLGADVDAVEAAIAGVE
Ga0307479_109582691	3300031962	Hardwood Forest Soil	VGSPEAAGIRDLKNGVSKDPRLCHEKGPGCSKVSPGAGAASDGRDLGADIDSVEAAIAGV
Ga0307472_1014195671	3300032205	Hardwood Forest Soil	IAERGRLPSGALVVSPESAGIRDLKDGVSHNPRLCREKMPGCAKVSPGAGAAPGGRDLGADVDAVEAAIAGVE
Ga0307472_1024263371	3300032205	Hardwood Forest Soil	ENPRLCREKVAGCSKVSPGAGAATGGKDLGADVDALETALQGVE
Ga0348332_114843181	3300032515	Plant Litter	VVGSPEAAGVHDLKDSVSKDPRLCHAKGPGCPKVSPGVGAASDGRDLGADIDAIDAAIAGVE
Ga0335082_113322262	3300032782	Soil	SSPEAAGIRDLKDGVSNNPRLCRDKTAGCGKVSPGSSAAPGGTDLGADIDALEAAIRGVE
Ga0335078_125831931	3300032805	Soil	IRDLKDGISKDPRLCHAKGPGCAKASPGADAASDGRDLGADIDAVEAAIAGVE
Ga0335083_103193041	3300032954	Soil	IAKDPRLCHERGEGCSKRSPGAGAASDGRDMGADVDAVEAAIAGVE
Ga0326727_106627141	3300033405	Peat Soil	VGSPEAAGIRDLKNTVSRDPRLCHTKGPGCNKISAGAGAAFDGHDLGADIDAVEAA
Ga0314861_0271360_3_161	3300033977	Peatland	RDLKDTVGKDPRLCHEKGPGCSRASPGVGAASDGRDLGADVDAVEAALAGVE
Ga0371488_0075757_1_123	3300033983	Peat Soil	LCHEKTPGCDKKSPGAAAATDGRDLGADVDAVEAAVAGVE
Ga0334827_016411_2979_3146	3300034065	Soil	VRNFDSKEGVSKDPRLCHAKGAGCSKVSPGAGAGSDGKDLGADIDAVEAAIAGVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041410

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences