Metagenome / Metatranscriptome Family F041396

Basic Information
Family ID	F041396
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	41 residues
Representative Sequence	RAHGGEIQCWNNEAGAGSTFVVRIPVATEAALAAAATKEAGR
Number of Associated Samples	131
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.62 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.375 % of family members)
Environment Ontology (ENVO)	Unclassified (25.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.14% β-sheet: 20.00% Coil/Unstructured: 62.86%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00072	Response_reg	75.00
PF00158	Sigma54_activat	15.62
PF02954	HTH_8	5.62
PF00672	HAMP	1.25
PF01584	CheW	0.62
PF13185	GAF_2	0.62
PF02518	HATPase_c	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	76.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	44.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	44.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	44.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	44.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.62 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	26.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10041991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1075	Open in IMG/M
3300001661\|JGI12053J15887_10469212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	602	Open in IMG/M
3300002907\|JGI25613J43889_10008133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2886	Open in IMG/M
3300002914\|JGI25617J43924_10051071	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300003220\|JGI26342J46808_1005181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1175	Open in IMG/M
3300004080\|Ga0062385_10778028	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300004091\|Ga0062387_100895618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	671	Open in IMG/M
3300004091\|Ga0062387_101659445	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005332\|Ga0066388_101224696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1286	Open in IMG/M
3300005434\|Ga0070709_11634884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005531\|Ga0070738_10296004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	680	Open in IMG/M
3300005537\|Ga0070730_10227949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1236	Open in IMG/M
3300005537\|Ga0070730_10825002	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005552\|Ga0066701_10124167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1532	Open in IMG/M
3300005554\|Ga0066661_10560355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	683	Open in IMG/M
3300005554\|Ga0066661_10783617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	558	Open in IMG/M
3300005557\|Ga0066704_10059238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2438	Open in IMG/M
3300006041\|Ga0075023_100287484	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006057\|Ga0075026_100097410	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300006173\|Ga0070716_100028745	All Organisms → cellular organisms → Bacteria	2998	Open in IMG/M
3300006176\|Ga0070765_100258909	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300006354\|Ga0075021_10266947	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300006755\|Ga0079222_10738828	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300006796\|Ga0066665_10416459	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300006893\|Ga0073928_11016366	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300007258\|Ga0099793_10066293	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300007258\|Ga0099793_10075125	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300007788\|Ga0099795_10565011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009012\|Ga0066710_102389167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	767	Open in IMG/M
3300009012\|Ga0066710_103875381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300009143\|Ga0099792_10697293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300009143\|Ga0099792_11139535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300009522\|Ga0116218_1203569	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300009624\|Ga0116105_1038618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1062	Open in IMG/M
3300009698\|Ga0116216_11000960	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010047\|Ga0126382_11566406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300010048\|Ga0126373_10045466	All Organisms → cellular organisms → Bacteria → Acidobacteria	3881	Open in IMG/M
3300010048\|Ga0126373_10207056	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300010048\|Ga0126373_10464469	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300010343\|Ga0074044_11099988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300010359\|Ga0126376_12368823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300010366\|Ga0126379_13583166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300010398\|Ga0126383_10022940	All Organisms → cellular organisms → Bacteria → Acidobacteria	4821	Open in IMG/M
3300010398\|Ga0126383_12870930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300011270\|Ga0137391_10614730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	910	Open in IMG/M
3300012198\|Ga0137364_10234993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1351	Open in IMG/M
3300012198\|Ga0137364_10533433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	883	Open in IMG/M
3300012202\|Ga0137363_11300267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300012206\|Ga0137380_11747449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012207\|Ga0137381_10436016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1144	Open in IMG/M
3300012349\|Ga0137387_10366565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1043	Open in IMG/M
3300012349\|Ga0137387_11054649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012350\|Ga0137372_10039596	All Organisms → cellular organisms → Bacteria → Acidobacteria	4260	Open in IMG/M
3300012359\|Ga0137385_10910563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	727	Open in IMG/M
3300012361\|Ga0137360_10001651	All Organisms → cellular organisms → Bacteria	13265	Open in IMG/M
3300012363\|Ga0137390_11947161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300012683\|Ga0137398_11103867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012917\|Ga0137395_10390107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	996	Open in IMG/M
3300012917\|Ga0137395_10632685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	774	Open in IMG/M
3300012917\|Ga0137395_10849893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	661	Open in IMG/M
3300012918\|Ga0137396_10408572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1006	Open in IMG/M
3300012918\|Ga0137396_10592008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	820	Open in IMG/M
3300012918\|Ga0137396_10957218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	623	Open in IMG/M
3300012924\|Ga0137413_10501078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	893	Open in IMG/M
3300012924\|Ga0137413_10988823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	659	Open in IMG/M
3300012925\|Ga0137419_10098331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2020	Open in IMG/M
3300012925\|Ga0137419_10483420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	981	Open in IMG/M
3300012927\|Ga0137416_11654291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300012971\|Ga0126369_11402448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	789	Open in IMG/M
3300014150\|Ga0134081_10250385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	619	Open in IMG/M
3300014154\|Ga0134075_10266663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	742	Open in IMG/M
3300014657\|Ga0181522_10232479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1088	Open in IMG/M
3300015054\|Ga0137420_1124534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1125	Open in IMG/M
3300015054\|Ga0137420_1194065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1069	Open in IMG/M
3300015054\|Ga0137420_1482450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1125	Open in IMG/M
3300016319\|Ga0182033_10254374	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300016319\|Ga0182033_12010584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300016371\|Ga0182034_11108134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	686	Open in IMG/M
3300017823\|Ga0187818_10002208	All Organisms → cellular organisms → Bacteria	8108	Open in IMG/M
3300017933\|Ga0187801_10072654	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300017936\|Ga0187821_10415668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300017955\|Ga0187817_10587034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	711	Open in IMG/M
3300017961\|Ga0187778_11074762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300018018\|Ga0187886_1216037	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300018086\|Ga0187769_10268232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1272	Open in IMG/M
3300018433\|Ga0066667_12345069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300019275\|Ga0187798_1437400	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300019999\|Ga0193718_1056524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300020022\|Ga0193733_1052927	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300020140\|Ga0179590_1170029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300020579\|Ga0210407_10156083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1761	Open in IMG/M
3300020579\|Ga0210407_10383023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1100	Open in IMG/M
3300020580\|Ga0210403_11122944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300020583\|Ga0210401_10618396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	945	Open in IMG/M
3300021088\|Ga0210404_10155300	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300021168\|Ga0210406_10098876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2481	Open in IMG/M
3300021168\|Ga0210406_11268023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300021171\|Ga0210405_11258259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300021171\|Ga0210405_11385895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300021404\|Ga0210389_11046749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	632	Open in IMG/M
3300021420\|Ga0210394_10005003	All Organisms → cellular organisms → Bacteria	15084	Open in IMG/M
3300021420\|Ga0210394_11117858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	679	Open in IMG/M
3300021478\|Ga0210402_11118731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	715	Open in IMG/M
3300021559\|Ga0210409_10344754	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300021559\|Ga0210409_11349709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300021559\|Ga0210409_11696479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300024271\|Ga0224564_1116941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300024279\|Ga0247692_1072332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300024284\|Ga0247671_1008948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1570	Open in IMG/M
3300024330\|Ga0137417_1093197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	732	Open in IMG/M
3300025475\|Ga0208478_1076675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	603	Open in IMG/M
3300025906\|Ga0207699_10607103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	797	Open in IMG/M
3300025939\|Ga0207665_10366669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1090	Open in IMG/M
3300026217\|Ga0209871_1112120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300026297\|Ga0209237_1069320	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300026301\|Ga0209238_1066124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1277	Open in IMG/M
3300026304\|Ga0209240_1066098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1350	Open in IMG/M
3300026315\|Ga0209686_1015685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3081	Open in IMG/M
3300026490\|Ga0257153_1060213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	771	Open in IMG/M
3300026499\|Ga0257181_1067951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	609	Open in IMG/M
3300026515\|Ga0257158_1005423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1783	Open in IMG/M
3300026523\|Ga0209808_1313581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300026532\|Ga0209160_1197693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	776	Open in IMG/M
3300026555\|Ga0179593_1183984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2164	Open in IMG/M
3300027643\|Ga0209076_1002165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4205	Open in IMG/M
3300027651\|Ga0209217_1126742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	717	Open in IMG/M
3300027660\|Ga0209736_1058417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1086	Open in IMG/M
3300027671\|Ga0209588_1220245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300027729\|Ga0209248_10001671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7056	Open in IMG/M
3300027795\|Ga0209139_10088500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1088	Open in IMG/M
3300027795\|Ga0209139_10348488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300027829\|Ga0209773_10355035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300027842\|Ga0209580_10331936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	757	Open in IMG/M
3300027846\|Ga0209180_10409209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	768	Open in IMG/M
3300027854\|Ga0209517_10024234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5411	Open in IMG/M
3300027889\|Ga0209380_10546021	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300027894\|Ga0209068_10787943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300027903\|Ga0209488_11082752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1129619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300031561\|Ga0318528_10417956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	720	Open in IMG/M
3300031680\|Ga0318574_10954909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300031718\|Ga0307474_10952239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	680	Open in IMG/M
3300031736\|Ga0318501_10290151	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300031753\|Ga0307477_10852729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	603	Open in IMG/M
3300031797\|Ga0318550_10014297	All Organisms → cellular organisms → Bacteria	3147	Open in IMG/M
3300031823\|Ga0307478_11439652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300031859\|Ga0318527_10486639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031890\|Ga0306925_10218088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2057	Open in IMG/M
3300031890\|Ga0306925_11986666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031897\|Ga0318520_10938313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300031912\|Ga0306921_12523022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031962\|Ga0307479_10838885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	893	Open in IMG/M
3300032059\|Ga0318533_10209039	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300032180\|Ga0307471_100090495	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300032180\|Ga0307471_103451301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300032783\|Ga0335079_10001816	All Organisms → cellular organisms → Bacteria	24427	Open in IMG/M
3300032805\|Ga0335078_12266071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300032893\|Ga0335069_11054017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	899	Open in IMG/M
3300033158\|Ga0335077_11861006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300033829\|Ga0334854_021314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1568	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Aquatic	Environmental → Aquatic	12.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.88%
Freshwater	Environmental → Aquatic → Freshwater	9.38%
Sediment	Environmental → Aquatic → Sediment	2.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.62%
Peat	Environmental → Terrestrial → Peat	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.38%
Loam	Environmental → Terrestrial → Soil → Loam	7.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Sand	Environmental → Terrestrial → Soil → Sand	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.38%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.25%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.62%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.62%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.62%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.62%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.62%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041396

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100419912	3300001546	Forest Soil	VRAHGGEILCRNNENGPGSTFIVRVPVATEAATAAAIAKEAGR*
JGI12053J15887_104692121	3300001661	Forest Soil	CWNNSEDSGSTFVVRVPIANEASVTAALAKEAGR*
JGI25613J43889_100081335	3300002907	Grasslands Soil	CYGIVRAHGGEIQCWNNEAGAGSTFVVRIPVATEAALASAAAKEAGR*
JGI25617J43924_100510713	3300002914	Grasslands Soil	AHGGEIQCWNNESGAGSTFVVRIPVATEAALAAAATKEAGR*
JGI26342J46808_10051811	3300003220	Bog Forest Soil	YGIVRAHGGEIQCWNNAEGSGSTFVVRIPIATEPAVMAAKEAGR*
Ga0062385_107780282	3300004080	Bog Forest Soil	VRAHGGEILCWNNAEELGSTFVVRLPQATESALAAAAAKEAGR*
Ga0062387_1008956181	3300004091	Bog Forest Soil	CYGIVRAHGGEIQCWNNETASGSTFLVRVPAATEAATAAVAKEAGR*
Ga0062387_1016594451	3300004091	Bog Forest Soil	AHGGEIQCWNNAEGGGSTFVVRIPIAAEQPAMAAKEAGR*
Ga0066388_1012246963	3300005332	Tropical Forest Soil	YGIVRAHGGEILCWNNEGETGSTFVVRLPAATESSLSAAAKEAGR*
Ga0070709_116348842	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	HGGEILCWNNSEQGGSTFVVRVPVANEASVAAALAKEAGR*
Ga0070738_102960041	3300005531	Surface Soil	GGEIQCWNNEGGDGSTFLVRLPAATEAAAAAMEAAG*
Ga0070730_102279493	3300005537	Surface Soil	CRNNENESGSTFIVRIPVATEAATAAAIAKEAGR*
Ga0070730_108250021	3300005537	Surface Soil	IVRAHGGEILCWNNSEGGGSTFVVRIPIAAEQPAMAAKEAGR*
Ga0066701_101241671	3300005552	Soil	YGIVRAHGGEIQCWNNEDGAGSTFVVRIPVATESALAAAAAKESGR*
Ga0066661_105603553	3300005554	Soil	RAHGGEIQCWNNEGGAGSTFVVRIPVATEAALAAAGTKEAGR*
Ga0066661_107836171	3300005554	Soil	YGIVRAHGGEIKCWNNEVGAGSTFVVRIPVATEAALAAAATKEAGR*
Ga0066704_100592384	3300005557	Soil	CYGIVRAHGGEIQCWNNEAGAGSTFVVRIPVATEAALAAAATKEAGR*
Ga0075023_1002874841	3300006041	Watersheds	YGIVRAHGGEILCWNNEEEQGSTFVVRLPLAAEKTFAAATNETAR*
Ga0075026_1000974101	3300006057	Watersheds	RAHGGEILCWNNSGQRGSTFVVRVPIANDASVTATLAKEAGR*
Ga0070716_1000287451	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AHGGEIQCWNNETGAGSTFVVRIPVATEAALAAAATKEAGR*
Ga0070765_1002589091	3300006176	Soil	AHGGEIQCWNNAESGGSTFVVRIPLAAEQPAMAAKEAGR*
Ga0075021_102669471	3300006354	Watersheds	EILCWNNEEEQGSTFVVRLPLAAEKTFAAATNETAR*
Ga0079222_107388283	3300006755	Agricultural Soil	VRAHGGEIQCWNNENGLGSTFAVRIPVATEGALAAAAAKEAGR*
Ga0066665_104164591	3300006796	Soil	IQCWNNEGGAGSTFVVRIPVATEAALAAAGTKEAGR*
Ga0073928_110163662	3300006893	Iron-Sulfur Acid Spring	CYGIVRAHGGEIQCWNNEAAAGSTFMVRIPLADTESAAPTVSAKEAGR*
Ga0099793_100662933	3300007258	Vadose Zone Soil	CWSNEGDAGSTFVVRIPVATEGALAAAATKEASP*
Ga0099793_100751253	3300007258	Vadose Zone Soil	RAHGGEIQCWNNEAGAGSTFVVRIPVATEAALAAAATKEAGR*
Ga0099795_105650112	3300007788	Vadose Zone Soil	GEILCWNNSEDSGSTFVVRVPIANEASVTAALAKEAGR*
Ga0066710_1023891673	3300009012	Grasslands Soil	VRAHGGEIQGWNNEDGLGSTFAVRIPVATESALAAAAAKEAGR
Ga0066710_1038753811	3300009012	Grasslands Soil	RAHAGEILCWNNSEGQGSTFVVRIPVANEAAAAAAATKEAGR
Ga0099792_106972931	3300009143	Vadose Zone Soil	HGGEILCWNNSEDSGSTFVVRVPIANEASVTAALAKEAGR*
Ga0099792_111395351	3300009143	Vadose Zone Soil	YGIVRAHGGEILCWNNSEQRGSTFVVRVPVANDASVAGTLAQEAGR*
Ga0116218_12035691	3300009522	Peatlands Soil	ILCWKNSGESGSTFLVRLPRATDTALAAAANEAGR*
Ga0116105_10386181	3300009624	Peatland	IQCWNHGAEPGSTFLVRLPVASEAAATAVAKEAGR*
Ga0116216_110009601	3300009698	Peatlands Soil	IVRAHGGEIQCWTNEDGAGSTFVVRIPVATEASLAAAAAKEAGR*
Ga0126382_115664061	3300010047	Tropical Forest Soil	IVRAHGGEILCWNNEGSQGSTFVVRIPIASEMPAAAIAKEAAR*
Ga0126373_100454661	3300010048	Tropical Forest Soil	IVRAHGGEIQCWNNQDGVGSTFIVRIPVATESALAAAAAKEAGR*
Ga0126373_102070561	3300010048	Tropical Forest Soil	RAHGGEIQCWNNEDGVGSTFVVRIPVATESALAAAAAKEAGR*
Ga0126373_104644691	3300010048	Tropical Forest Soil	HGGEILCWNNEGSPGSTFLIRIPVANEAAAAAAAAKEAGR*
Ga0074044_110999881	3300010343	Bog Forest Soil	VRAHGGEILCWNNEAESGSTFVVRLPAATETTLAAAAKEAGR*
Ga0126376_123688231	3300010359	Tropical Forest Soil	RAHGGEIQCFNNEDAAGSTFVVRIPVATESALAAAAAKESGR*
Ga0126379_135831662	3300010366	Tropical Forest Soil	GGEIQCWNNETGAGSTFLVRIPVATEAAVAATAAKEAGR*
Ga0126383_100229401	3300010398	Tropical Forest Soil	AHGGEILCWNNEGETGSTFVVRLPAATESSLTAAAKEAGR*
Ga0126383_128709301	3300010398	Tropical Forest Soil	RAHSGEIQCWNNADGRGSTFAVRLPIAAEAPMASAKEAGQ*
Ga0137391_106147301	3300011270	Vadose Zone Soil	ICYGIVRAHGGEIQCWNNENSPGSTFVVRIPVATEAAVATAAAKEAGR*
Ga0137364_102349933	3300012198	Vadose Zone Soil	GEIQCWNNEGGAGSTFVVRIPVATEAALAAAGTKEAGR*
Ga0137364_105334333	3300012198	Vadose Zone Soil	GIVRAHGGEIQCWNNEGGAGSTFVVRIPVATEAALAAAATKEAGR*
Ga0137363_113002671	3300012202	Vadose Zone Soil	IVRAHGGEIQCWNNAAGAGSTFVVRIPVATEAALAAAASKEAGR*
Ga0137380_117474492	3300012206	Vadose Zone Soil	CYGIVRAHGGEIQCWNNDGEGSTFVVRLPAATEAGIATAKEAGR*
Ga0137381_104360163	3300012207	Vadose Zone Soil	VRAHGGEIQCWKNEAGAGSTFVVRIPVATEAALAAAATKEVRR*
Ga0137387_103665653	3300012349	Vadose Zone Soil	SYGIVRAHGGEIQCWSNEAGAGSTFVVRLPVATEAALAAAAAKEAVR*
Ga0137387_110546491	3300012349	Vadose Zone Soil	EIQCWNNDGEGSTFVVRLPAATEAGIATAKEAGR*
Ga0137372_100395961	3300012350	Vadose Zone Soil	AHGGEIQCWNNEGGAGSTFVVRIPLATESALAAAAAKEAGR*
Ga0137385_109105631	3300012359	Vadose Zone Soil	IQGGNNEGGAGSTFFVRIPLATESALAAAAAKEAGR*
Ga0137360_100016511	3300012361	Vadose Zone Soil	GGEIQCWNNGATGGSTFVVRIPVATETSIAAVKEAGR*
Ga0137390_119471611	3300012363	Vadose Zone Soil	IVRAHGGEIQCWNNEAGPGSTFVVRIPVATEAALAAAAAKEAGR*
Ga0137398_111038671	3300012683	Vadose Zone Soil	IQCWNNEAGAGSTFVVRIPVATEAALAAAATKEARP*
Ga0137395_103901073	3300012917	Vadose Zone Soil	YGIVRAHGGEIQCWNNAGGAGSTFVVRIPVATEAALAAAATKEAGR*
Ga0137395_106326851	3300012917	Vadose Zone Soil	IVRAHGGEILCWNNSDQRGSTFVVRVPVANEASVAAALAKEAGR*
Ga0137395_108498931	3300012917	Vadose Zone Soil	IVRAHGGEILCWNNSEDTGSTFVVRVPIANEASVTAALAKEAGR*
Ga0137396_104085721	3300012918	Vadose Zone Soil	GGEIQCWSNEGEAGSTFVVRIPVATEGALAAAATKEAGR*
Ga0137396_105920081	3300012918	Vadose Zone Soil	ICYGIVRAHGGEIQCWSNEGDAGSTFVVRIPVATEGALAAAATKEAGR*
Ga0137396_109572181	3300012918	Vadose Zone Soil	IQCWNNEAGAGSTFVVRIPVATEAALASAAAKEAGR*
Ga0137413_105010781	3300012924	Vadose Zone Soil	HGGEILCWNNSDNSGSTFVVRVPIANEASVTAALAKEAGR*
Ga0137413_109888231	3300012924	Vadose Zone Soil	GGEILCWNNSEDSGSTFVVRVPIANEASVTAALAKEAGR*
Ga0137419_100983311	3300012925	Vadose Zone Soil	HGGEIQCWSNEGEAGSTFVVRIPVATEGALAAAATKEAGR*
Ga0137419_104834203	3300012925	Vadose Zone Soil	GEIQCWNNDNGEGSTFLVKLPIATEAATAAMEAAG*
Ga0137416_116542912	3300012927	Vadose Zone Soil	HGGEIQCWNNEAGAGSTFVVRIPVATEAALAASATKEAGR*
Ga0126369_114024483	3300012971	Tropical Forest Soil	GEIQCWNNEDGAGSTFLVRIPVATESALAAAAAKESGR*
Ga0134081_102503851	3300014150	Grasslands Soil	QCWNNEAGAGSTFVVRIPVATEAALAAAATKEAGR*
Ga0134075_102666633	3300014154	Grasslands Soil	VRAHGGEIQCWNNDGEGSTFVVRLPAATEAGIATAKEAGR*
Ga0181522_102324791	3300014657	Bog	EIQCWNNGAAPGSTFLVRVPVATDAATNAVAKEAGR*
Ga0137420_11245343	3300015054	Vadose Zone Soil	GEIQCWNNEAGPGSTFVVRIPVATEAALAAAAAKEAGR*
Ga0137420_11940651	3300015054	Vadose Zone Soil	VRAHGGEILCWNNSEQRGSTFIVRVPVANDASVAAALAKEAGR*
Ga0137420_14824501	3300015054	Vadose Zone Soil	GNSMLEHNEAGPGSTFVVRIPVATEAALAAAAAKEAGR*
Ga0182033_102543743	3300016319	Soil	CWNNPETEERGSTFVVRLPQATENAIAAAAAKEAGK
Ga0182033_120105841	3300016319	Soil	IVRAHGGEIQCWNNEGGDGSTFLVRLPAATEAAAAAMEAAG
Ga0182034_111081343	3300016371	Soil	GGEIQCWSNTNQEGSTFSVRIPVAVEPVTVAAKEAGR
Ga0187818_100022081	3300017823	Freshwater Sediment	RAHGGEILCWNNEGETGSTFVVRLPITTETTLAAAAKEVGR
Ga0187801_100726541	3300017933	Freshwater Sediment	IVRAHGGEIFCWNNPETEERGSTFVVRLPQATENAIAAAAAKEAGR
Ga0187821_104156682	3300017936	Freshwater Sediment	YGIVRAHGGEIQCWNNAESRGSTFVVRIPIAAETIAAVAKEAGR
Ga0187817_105870341	3300017955	Freshwater Sediment	IQCWNNEAGAGSTFVVRIPVATEAALAAAASKEAGR
Ga0187778_110747621	3300017961	Tropical Peatland	IQCWNNEEGPGSTFVVRIPIATESALAAVAAKEAGR
Ga0187886_12160371	3300018018	Peatland	IVRAHGGEILCWKNAGESGSTFLVRLPRATETALAAAANEAGR
Ga0187769_102682323	3300018086	Tropical Peatland	AHGGEILCWNNENECGSTFLVRLPMANEAAVAAAAKEVGR
Ga0066667_123450691	3300018433	Grasslands Soil	EVLCWNNSDGAGSTFVVRIPVANEAAAAAAGAKEAGR
Ga0187798_14374001	3300019275	Peatland	HGGEISCHNNRGEPGATFVVRLPAMAESVAAADAARMGPS
Ga0193718_10565241	3300019999	Soil	GIVRAHGGEIQCWNNDSGSGSTFMVRIPVAESEIVNSAAAKEAGR
Ga0193733_10529271	3300020022	Soil	HGGEIQCWNNEAGAGSTFVVRIPVATEAALAAAATKEARS
Ga0179590_11700293	3300020140	Vadose Zone Soil	HGGEILCWNNSEDSGSTFVVRVPIANEASVTAALAKEAGR
Ga0210407_101560831	3300020579	Soil	GGEIQCWNNEGGAGSTFVVRIPVATEAALAAAATKEAGR
Ga0210407_103830231	3300020579	Soil	GIVRAHGGEIQCWNNTESGGSTFVVRIPLAAELPAMAAKEAGR
Ga0210403_111229441	3300020580	Soil	HGGENQCANNEDGGSTFVVRVPVATEATLRSAAAKEAGR
Ga0210401_106183963	3300020583	Soil	GGEIFCWNNEAENGSTFVVRLPVATDSALAAAATEAG
Ga0210404_101553003	3300021088	Soil	AHGVEILCWNNEGESGSTVVVRLPAVTETSLAAAVKEAGR
Ga0210406_100988764	3300021168	Soil	HGGEILCWNNEGESGSTFVVRLPAATETSLAAAVKEAGR
Ga0210406_112680232	3300021168	Soil	VRAHGGEILCWNNATEAGSTFVVHLPIATDAALAKEAAR
Ga0210405_112582591	3300021171	Soil	RAHGGEIQCWNNAESGGSTFVVRIPIAAEQLPALAAKEAGR
Ga0210405_113858952	3300021171	Soil	EIQCWNNAESGGSTFVVRIPIAAEQPAMAAKEAGR
Ga0210389_110467491	3300021404	Soil	EIQCWSNDTAAGSTFLVRVPVATDAATSAAANAAVAKEAGR
Ga0210394_100050031	3300021420	Soil	VRAHGGEILCWNNEEEQGSTFVVRLPLAAEKTFAAATNETAR
Ga0210394_111178583	3300021420	Soil	ILCWNNSGQPGSTFVVRVPVANDASVTATLAKEAGR
Ga0210402_111187311	3300021478	Soil	GEILCWNNSEQRGSTFVVRVPVANEASVAAALAKEAGR
Ga0210409_103447543	3300021559	Soil	EIFCWNNPETEERGSTFVVRLPQATENAIAAAAAKEAGR
Ga0210409_113497091	3300021559	Soil	RAHGGEIQCWNNDAGAGSTFVVRIPVATEAALAAAATKEAGR
Ga0210409_116964792	3300021559	Soil	RAHGGEIQCWNNEAGAGSTFVVRIPVATEAALASAAAKEAGR
Ga0224564_11169412	3300024271	Soil	MCYGIVRAHGGEIQCWNNEVAPGSTFLVRVPAATEAATAAVAKEVGR
Ga0247692_10723321	3300024279	Soil	HGGEILCWNNSEGGGSTFVVRIPIAAEQPAMAAKEAGR
Ga0247671_10089481	3300024284	Soil	VRAHGGEILCWNNSEGGGSTFVVRIPIAAEQPALAAKEAGR
Ga0137417_10931973	3300024330	Vadose Zone Soil	EIQCWNNAATGGSTFVVRIPVATETSIAGAKEVGR
Ga0208478_10766753	3300025475	Arctic Peat Soil	ILCWNNAQESGSTFVVRLPQTSESALAAAAAKEAAR
Ga0207699_106071031	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LCWNNSEQTGSTFVVRVPVANEASVAAVLAKEAGR
Ga0207665_103666693	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	IVRAHGGEIQCWNNEAGSGSTFMIRIPLADTESAAPTVSAKEAGR
Ga0209871_11121202	3300026217	Permafrost Soil	RAHGGEIQCWNNDATAGSTFLVRVPVATEAVTTAVAKEAGR
Ga0209237_10693202	3300026297	Grasslands Soil	VRAHGGEIQCWNNDGEGSTFVVRLPAATEAGIATAKEAGR
Ga0209238_10661243	3300026301	Grasslands Soil	GGEIQCWNNETGAGSTFVVRIPVATEAALAAAVTKEAGR
Ga0209240_10660981	3300026304	Grasslands Soil	GEIQCWNNEAGAGSTFVVRIPVATEAALAAAATKEAGR
Ga0209686_10156855	3300026315	Soil	QCWNNEDGAGSTFVVRIPVATESALAAAAAKESGR
Ga0257153_10602133	3300026490	Soil	HGGEIQCWNNDSGEGSTFLVKLPIATEAATAAMEAAG
Ga0257181_10679513	3300026499	Soil	GEILCWNNSEQPGSTFVVRVPVANDASVAAALAKEAGR
Ga0257158_10054231	3300026515	Soil	VRAHGGEIQCWNNEAGAGSTFVVRIPVATEAALAAAASKEAGR
Ga0209808_13135812	3300026523	Soil	IQCWNNEDGAGSTFVVRIPVATESALAAAAAKEAGR
Ga0209160_11976933	3300026532	Soil	CYGIVRAHGGEIQCWNNEAGAGSTFVVRIPVATEAALAAAATKEAGR
Ga0179593_11839844	3300026555	Vadose Zone Soil	VRAHGGEIQCWSNEGDAGSTFVVRIPVATEGALAAAATKEAGR
Ga0209076_10021655	3300027643	Vadose Zone Soil	GGEIQCWNNEAGAGSTFVVRIPVATEAALAAAATKEAGR
Ga0209217_11267421	3300027651	Forest Soil	GIVRAHGGEILCWNNSEQPGSTFVVRVPVANEASVAALAKEAGR
Ga0209736_10584171	3300027660	Forest Soil	ILCWNNSEQHGSTFVVRVPLANEASVAAALAKEAGR
Ga0209588_12202452	3300027671	Vadose Zone Soil	ICYGIVRAHGGEIQCWSNEGDAGSTFVVRIPVATEGALAAAATKEAGR
Ga0209248_100016719	3300027729	Bog Forest Soil	RAHGGEIQCWNNEAASGSTFLVRVPAATEAATAAVAKEVGR
Ga0209139_100885001	3300027795	Bog Forest Soil	VRAHGGEIQCWNNADIGGSTFVVRIPLAAEQPAMAAKEAGR
Ga0209139_103484882	3300027795	Bog Forest Soil	EIQCWNNAEGGGSTFVVRIPIAAEQPAMAAKEAGR
Ga0209773_103550351	3300027829	Bog Forest Soil	ICYGIVRAHGGEIQCWNNADIGGSTFVVRIPLAAEQPAMAAKEAGR
Ga0209580_103319361	3300027842	Surface Soil	ICYGIVRAHGGEILCWNNSGQRGSTFVVRVPIANDASVTATLAKEAGR
Ga0209180_104092091	3300027846	Vadose Zone Soil	ILCWNNSSGEGSTFIVRIPSASEPAVAAAVMEAGR
Ga0209517_100242341	3300027854	Peatlands Soil	EILCWKNAGESGSTFLVRLPRAAESGLAAAANEAGR
Ga0209380_105460211	3300027889	Soil	YGIVRAHGGEIQCWNNEEGAGSTFVVRVPVATEASLAAAAAKEASR
Ga0209068_107879431	3300027894	Watersheds	VTPPPEYFRIVYDIVRAHGGEIFCTNNEEGPGCTFIVRIPVATEAATAAIAKEAGR
Ga0209488_110827521	3300027903	Vadose Zone Soil	VRAHGGEILCWNNSGQRGSTFVVRVPVANEASVAAALAKEAGR
(restricted) Ga0255311_11296191	3300031150	Sandy Soil	IVRAHGGEILCSNNEGTSGSTFVVRLPVADSAPSAAAKEAGR
Ga0318528_104179563	3300031561	Soil	IQCWNEEAGGSTFVVRVPVATESALAAAAAKEAGR
Ga0318574_109549092	3300031680	Soil	YGIVRAHGGEIQCWNNEDGAGSTFLVRIPVATESALAAAAAKESGR
Ga0307474_109522393	3300031718	Hardwood Forest Soil	GGEIQCWNNEAGAGSTFVVRIPVATEAAMAAAAAKETGR
Ga0318501_102901511	3300031736	Soil	GGEILCWNNEGESGSTFVVRLPISSESAVAAAASEARR
Ga0307477_108527293	3300031753	Hardwood Forest Soil	LCWNNSKQRGSTFVVRVPVANEASVAAAMAKEAGR
Ga0318550_100142971	3300031797	Soil	HGGEFLCWNNEGESGSTFVVRLPISSEPALAAAASEARR
Ga0307478_114396522	3300031823	Hardwood Forest Soil	GIVRAHGGEILCWNNSEQSGSTFVVRVPLANEASVAAALAKEAGR
Ga0318527_104866392	3300031859	Soil	AGEILCWNNEGESGSTFVVRLPISSESALAAAAREARR
Ga0306925_102180883	3300031890	Soil	EIQCWNNEDGAGSTFLVRIPVATESALAAAAAKESGR
Ga0306925_119866662	3300031890	Soil	LVLIFCYGLGRAHGGEIQCWNNEGGDGSTFLVRLPAATEAAAAAMEAAG
Ga0318520_109383131	3300031897	Soil	VRAHGGEILCWNNEGESGSTFVVRLPISSESALAAAASEARR
Ga0306921_125230221	3300031912	Soil	ICYGIVRAHGGEIQCWSNTNREGSTFSVRIPVAAENANAAAKEAGR
Ga0307479_108388853	3300031962	Hardwood Forest Soil	GEIQCWNNETGAGSTFVVRIPVATEAALAAAATKEAAR
Ga0318533_102090391	3300032059	Soil	VRAHGGEILCWNNEGESGSTFVVRLPISSESAVAAAASEARR
Ga0307471_1000904951	3300032180	Hardwood Forest Soil	IVRAHGGEIFCWNNPETEERGSTFVVRLPQATENAIAAAAVKEAGR
Ga0307471_1034513011	3300032180	Hardwood Forest Soil	HSGEILCWNNEGESGSTFVVRLPAATESSLAAAAKEAGR
Ga0335079_100018161	3300032783	Soil	EIQCWNNAEGPGSTFLVRIPVATEQQALAAKEAAR
Ga0335078_122660711	3300032805	Soil	YGIVRAHGGEILCWNNEGSTGSTFIVRLPIATDSALAAAAKEAGR
Ga0335069_110540171	3300032893	Soil	CYGIVRAHGGEILCHNNENAPGSTFIVRVPVATEAATAAAIAKEAGR
Ga0335077_118610062	3300033158	Soil	HGGEILCWNNPETEERGSTFVVRLPQATENAIAAAAAKEAGR
Ga0334854_021314_1453_1566	3300033829	Soil	GGEIQCWNNGTLPGSTFLVRVPVANEAAAAIAKEAGR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign