Metagenome / Metatranscriptome Family F041377

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041377
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	80 residues
Representative Sequence	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Number of Associated Samples	126
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.87 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.125 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.375 % of family members)
Environment Ontology (ENVO)	Unclassified (40.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.625 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF03109	ABC1	2.50
PF04392	ABC_sub_bind	2.50
PF02371	Transposase_20	1.88
PF00005	ABC_tran	1.88
PF12697	Abhydrolase_6	1.25
PF00753	Lactamase_B	1.25
PF04828	GFA	1.25
PF09335	SNARE_assoc	1.25
PF13435	Cytochrome_C554	1.25
PF00155	Aminotran_1_2	1.25
PF01597	GCV_H	0.62
PF01636	APH	0.62
PF02441	Flavoprotein	0.62
PF13414	TPR_11	0.62
PF01654	Cyt_bd_oxida_I	0.62
PF03466	LysR_substrate	0.62
PF03807	F420_oxidored	0.62
PF12833	HTH_18	0.62
PF00561	Abhydrolase_1	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	2.50
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.50
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.88
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.25
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.25
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.25
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.25
COG0509	Glycine cleavage system protein H (lipoate-binding)	Amino acid transport and metabolism [E]	0.62
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
All Organisms	root	All Organisms	41.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
cellular organisms	root	All Organisms → cellular organisms	41.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.88 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.88 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.88 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.88 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	1.25 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.62 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.88 %
Bradyrhizobium barranii subsp. barranii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	1.25 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5401AKE4I	Not Available	514	Open in IMG/M
2170459004\|F62QY1Z02GPRXW	Not Available	524	Open in IMG/M
2189573000\|GPBTN7E02H6NH8	Not Available	539	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10143174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	577	Open in IMG/M
3300002245\|JGIcombinedJ26739_100695296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	895	Open in IMG/M
3300002906\|JGI25614J43888_10088463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	845	Open in IMG/M
3300002910\|JGI25615J43890_1003531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2317	Open in IMG/M
3300002917\|JGI25616J43925_10195464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	785	Open in IMG/M
3300004633\|Ga0066395_10015505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2928	Open in IMG/M
3300004633\|Ga0066395_10256584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	940	Open in IMG/M
3300005174\|Ga0066680_10328747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	975	Open in IMG/M
3300005181\|Ga0066678_10043523	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300005332\|Ga0066388_100024946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	5406	Open in IMG/M
3300005332\|Ga0066388_100430601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1962	Open in IMG/M
3300005332\|Ga0066388_101360787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300005332\|Ga0066388_103593566	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300005332\|Ga0066388_104873247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	682	Open in IMG/M
3300005332\|Ga0066388_105214614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	659	Open in IMG/M
3300005434\|Ga0070709_11124910	Not Available	629	Open in IMG/M
3300005435\|Ga0070714_101276260	Not Available	717	Open in IMG/M
3300005445\|Ga0070708_100775472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	901	Open in IMG/M
3300005467\|Ga0070706_101287765	Not Available	670	Open in IMG/M
3300005518\|Ga0070699_100554231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1046	Open in IMG/M
3300005559\|Ga0066700_10605222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	764	Open in IMG/M
3300005713\|Ga0066905_100504658	Not Available	1006	Open in IMG/M
3300005713\|Ga0066905_101002851	Not Available	736	Open in IMG/M
3300005713\|Ga0066905_101872119	Not Available	555	Open in IMG/M
3300005764\|Ga0066903_100145856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3383	Open in IMG/M
3300005764\|Ga0066903_103712140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	821	Open in IMG/M
3300005764\|Ga0066903_109149565	Not Available	500	Open in IMG/M
3300006049\|Ga0075417_10547727	Not Available	585	Open in IMG/M
3300006173\|Ga0070716_100917855	Not Available	687	Open in IMG/M
3300006603\|Ga0074064_11798981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	953	Open in IMG/M
3300006796\|Ga0066665_11438087	Not Available	535	Open in IMG/M
3300007076\|Ga0075435_101627309	Not Available	567	Open in IMG/M
3300009090\|Ga0099827_10629643	Not Available	926	Open in IMG/M
3300009137\|Ga0066709_102043944	Not Available	793	Open in IMG/M
3300009143\|Ga0099792_10028788	All Organisms → cellular organisms → Bacteria → Proteobacteria	2554	Open in IMG/M
3300009147\|Ga0114129_11343718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	884	Open in IMG/M
3300009792\|Ga0126374_10358584	Not Available	1003	Open in IMG/M
3300010043\|Ga0126380_11072869	Not Available	684	Open in IMG/M
3300010043\|Ga0126380_11827241	Not Available	550	Open in IMG/M
3300010046\|Ga0126384_10926275	Not Available	789	Open in IMG/M
3300010046\|Ga0126384_12320360	Not Available	518	Open in IMG/M
3300010047\|Ga0126382_12098595	Not Available	541	Open in IMG/M
3300010048\|Ga0126373_12853808	Not Available	539	Open in IMG/M
3300010358\|Ga0126370_12016797	Not Available	564	Open in IMG/M
3300010359\|Ga0126376_12406216	Not Available	574	Open in IMG/M
3300010366\|Ga0126379_10171383	All Organisms → cellular organisms → Bacteria → Proteobacteria	2052	Open in IMG/M
3300010366\|Ga0126379_13582733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300010376\|Ga0126381_101419314	Not Available	1003	Open in IMG/M
3300010376\|Ga0126381_103422017	Not Available	624	Open in IMG/M
3300010863\|Ga0124850_1005910	All Organisms → cellular organisms → Bacteria	3842	Open in IMG/M
3300012180\|Ga0153974_1148182	Not Available	550	Open in IMG/M
3300012198\|Ga0137364_10781781	Not Available	721	Open in IMG/M
3300012202\|Ga0137363_10217216	Not Available	1541	Open in IMG/M
3300012202\|Ga0137363_10307459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1303	Open in IMG/M
3300012205\|Ga0137362_10480662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300012211\|Ga0137377_10589277	Not Available	1049	Open in IMG/M
3300012357\|Ga0137384_11070964	Not Available	647	Open in IMG/M
3300012359\|Ga0137385_10266805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1479	Open in IMG/M
3300012361\|Ga0137360_10517290	Not Available	1017	Open in IMG/M
3300012362\|Ga0137361_10446319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1188	Open in IMG/M
3300012395\|Ga0134044_1229384	Not Available	504	Open in IMG/M
3300012927\|Ga0137416_10158533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1779	Open in IMG/M
3300012930\|Ga0137407_11142308	Not Available	739	Open in IMG/M
3300012948\|Ga0126375_10320632	Not Available	1085	Open in IMG/M
3300012955\|Ga0164298_11122459	Not Available	590	Open in IMG/M
3300012971\|Ga0126369_10428898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1366	Open in IMG/M
3300012971\|Ga0126369_10620992	Not Available	1152	Open in IMG/M
3300012971\|Ga0126369_11757029	Not Available	709	Open in IMG/M
3300012984\|Ga0164309_11232311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	629	Open in IMG/M
3300012989\|Ga0164305_12090753	Not Available	519	Open in IMG/M
3300016270\|Ga0182036_11562536	Not Available	555	Open in IMG/M
3300016319\|Ga0182033_10246029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1450	Open in IMG/M
3300016357\|Ga0182032_10664084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	872	Open in IMG/M
3300016371\|Ga0182034_10090639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2159	Open in IMG/M
3300016371\|Ga0182034_10696762	Not Available	863	Open in IMG/M
3300016371\|Ga0182034_11907346	Not Available	524	Open in IMG/M
3300016387\|Ga0182040_10485118	Not Available	985	Open in IMG/M
3300016422\|Ga0182039_10832033	Not Available	821	Open in IMG/M
3300016445\|Ga0182038_11789618	Not Available	554	Open in IMG/M
3300018433\|Ga0066667_10017651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3693	Open in IMG/M
3300021168\|Ga0210406_10648207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300021178\|Ga0210408_10166156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1751	Open in IMG/M
3300021439\|Ga0213879_10016447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1708	Open in IMG/M
3300021559\|Ga0210409_11484727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300021560\|Ga0126371_10921271	Not Available	1017	Open in IMG/M
3300021560\|Ga0126371_12987506	Not Available	573	Open in IMG/M
3300025910\|Ga0207684_11011679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	695	Open in IMG/M
3300025910\|Ga0207684_11109841	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300025915\|Ga0207693_11109074	Not Available	601	Open in IMG/M
3300026304\|Ga0209240_1005148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4944	Open in IMG/M
3300026306\|Ga0209468_1173750	Not Available	545	Open in IMG/M
3300026309\|Ga0209055_1290455	Not Available	513	Open in IMG/M
3300026310\|Ga0209239_1039797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2174	Open in IMG/M
3300026320\|Ga0209131_1057944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2159	Open in IMG/M
3300026328\|Ga0209802_1130552	Not Available	1091	Open in IMG/M
3300026361\|Ga0257176_1004090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300027071\|Ga0209214_1002892	Not Available	1743	Open in IMG/M
3300027748\|Ga0209689_1231237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300027874\|Ga0209465_10197144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1005	Open in IMG/M
3300027882\|Ga0209590_10966583	Not Available	533	Open in IMG/M
3300028047\|Ga0209526_10823194	Not Available	573	Open in IMG/M
3300031543\|Ga0318516_10204825	Not Available	1139	Open in IMG/M
3300031543\|Ga0318516_10244642	Not Available	1037	Open in IMG/M
3300031543\|Ga0318516_10382522	Not Available	811	Open in IMG/M
3300031543\|Ga0318516_10421275	Not Available	768	Open in IMG/M
3300031545\|Ga0318541_10022497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3035	Open in IMG/M
3300031546\|Ga0318538_10259763	Not Available	933	Open in IMG/M
3300031546\|Ga0318538_10587253	Not Available	604	Open in IMG/M
3300031561\|Ga0318528_10730791	Not Available	529	Open in IMG/M
3300031564\|Ga0318573_10053125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1983	Open in IMG/M
3300031573\|Ga0310915_10462634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300031640\|Ga0318555_10610931	Not Available	590	Open in IMG/M
3300031681\|Ga0318572_10439106	Not Available	776	Open in IMG/M
3300031719\|Ga0306917_11321708	Not Available	557	Open in IMG/M
3300031723\|Ga0318493_10176088	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300031723\|Ga0318493_10271800	Not Available	909	Open in IMG/M
3300031744\|Ga0306918_10878169	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031747\|Ga0318502_10717986	Not Available	604	Open in IMG/M
3300031748\|Ga0318492_10144764	Not Available	1195	Open in IMG/M
3300031763\|Ga0318537_10053183	Not Available	1472	Open in IMG/M
3300031763\|Ga0318537_10313343	Not Available	580	Open in IMG/M
3300031765\|Ga0318554_10832957	Not Available	515	Open in IMG/M
3300031768\|Ga0318509_10134259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1357	Open in IMG/M
3300031779\|Ga0318566_10239343	Not Available	900	Open in IMG/M
3300031798\|Ga0318523_10289919	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300031805\|Ga0318497_10128063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1378	Open in IMG/M
3300031833\|Ga0310917_10372299	Not Available	970	Open in IMG/M
3300031833\|Ga0310917_10769775	Not Available	650	Open in IMG/M
3300031835\|Ga0318517_10435794	Not Available	591	Open in IMG/M
3300031879\|Ga0306919_10088779	Not Available	2149	Open in IMG/M
3300031879\|Ga0306919_11383076	Not Available	531	Open in IMG/M
3300031880\|Ga0318544_10074585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1256	Open in IMG/M
3300031880\|Ga0318544_10199496	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300031893\|Ga0318536_10040115	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2229	Open in IMG/M
3300031896\|Ga0318551_10719926	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031897\|Ga0318520_10090298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1701	Open in IMG/M
3300031897\|Ga0318520_10452112	Not Available	789	Open in IMG/M
3300031897\|Ga0318520_10716951	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300031897\|Ga0318520_11102642	Not Available	503	Open in IMG/M
3300031941\|Ga0310912_10607880	Not Available	850	Open in IMG/M
3300031942\|Ga0310916_10226138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1571	Open in IMG/M
3300031945\|Ga0310913_10723239	Not Available	703	Open in IMG/M
3300031946\|Ga0310910_11251315	Not Available	574	Open in IMG/M
3300032001\|Ga0306922_11661181	Not Available	633	Open in IMG/M
3300032025\|Ga0318507_10310978	Not Available	685	Open in IMG/M
3300032035\|Ga0310911_10387316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300032042\|Ga0318545_10219388	Not Available	681	Open in IMG/M
3300032044\|Ga0318558_10246702	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300032054\|Ga0318570_10380425	Not Available	643	Open in IMG/M
3300032063\|Ga0318504_10614526	Not Available	522	Open in IMG/M
3300032068\|Ga0318553_10211084	Not Available	1012	Open in IMG/M
3300032089\|Ga0318525_10459274	Not Available	652	Open in IMG/M
3300032090\|Ga0318518_10057507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1865	Open in IMG/M
3300032090\|Ga0318518_10584184	Not Available	570	Open in IMG/M
3300032094\|Ga0318540_10210540	Not Available	937	Open in IMG/M
3300033289\|Ga0310914_10888190	Not Available	790	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.50%
Host-Associated	Host-Associated	2.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.50%
Plants	Host-Associated → Plants	1.88%
Fungi	Host-Associated → Fungi	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.88%
Mycelium	Host-Associated → Fungi → Mycelium	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Loam	Environmental → Terrestrial → Soil → Loam	17.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.88%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.88%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.88%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_06478140	2070309009	Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
E4B_07330820	2170459004	Grass Soil	LISTIKVMPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
N55_04618040	2189573000	Grass Soil	NGQAMSEVIHASLARSDGSFGPEDIALLAAGLESALRHLDITNRNDPATTLVAKLIIQLARTGERDPSRLAKRAIEIVRGSS
AF_2010_repII_A1DRAFT_101431741	3300000597	Forest Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALINLHITNRNDPATTVVAKLIIQLARDGECDPARLAIRAIEIVRG
JGIcombinedJ26739_1006952962	3300002245	Forest Soil	MSEVIHALARRDVSFGPEDIAVLTAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS*
JGI25614J43888_100884631	3300002906	Grasslands Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
JGI25615J43890_10035312	3300002910	Grasslands Soil	MSEVIARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATIAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
JGI25616J43925_101954641	3300002917	Grasslands Soil	IINDDHFGWGSPVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0066395_100155052	3300004633	Tropical Forest Soil	MSEVIHALARCDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTVVAKLIIQLARDGECDPARLATRAIEIVRGSS*
Ga0066395_102565842	3300004633	Tropical Forest Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRGSS*
Ga0066680_103287471	3300005174	Soil	MSEVIHALVRRDVSFGPEDIAVLAAGLESALTDLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS*
Ga0066678_100435232	3300005181	Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0066388_1000249469	3300005332	Tropical Forest Soil	FVIIDDDHFGRGNPQLDLDQKVVPMSEVIHALARRDVSFGPEDIARLATGLESALTNLRITNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRGSS*
Ga0066388_1004306012	3300005332	Tropical Forest Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALINLHITNRNDPATTVVAKLIIQLARDGECDPARLAIRAIEIVRGSS*
Ga0066388_1013607871	3300005332	Tropical Forest Soil	MSEVIRAALARGVVSFGPEDIALLAAGLESALRHLAITNRNDPTVTSVAKLIIQLAGNGERDPTRLAKRAIEIVRGSS*
Ga0066388_1035935662	3300005332	Tropical Forest Soil	MSEVISAAVARGDVSFAPEDIALLATGLESALANLAITNRNDPTTTAVAKLIIQLARNGERDPTRLAKRAVEIVRGSS*
Ga0066388_1048732472	3300005332	Tropical Forest Soil	MSEVIHALARCDVSFGPEDIAGLAAGLESALTNLHITNRNDPATTVVAKLIIQLARDGECDPARLATRAIEIVRGSS*
Ga0066388_1052146142	3300005332	Tropical Forest Soil	MMSEMIHAALARGGVSFGPEDITLLVAGLESALTNLDITNRNDPTASLVAKLIIQLARNGERDPTRLAKRAIAIVRGSS*
Ga0070709_111249102	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS*
Ga0070714_1012762602	3300005435	Agricultural Soil	MSEVIAPLARDGASFEPEDIALLAAGLETALRSLDITNRNDPATTLIAKLIIQIAGDGERDPTRLAKRAVEIVRGSS*
Ga0070708_1007754722	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GSPVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0070706_1012877652	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVIHALAHRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEI
Ga0070699_1005542312	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRL
Ga0066700_106052222	3300005559	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS*
Ga0066905_1005046583	3300005713	Tropical Forest Soil	MSEVIHAPLARDGVSFGPEDIALLAAGLESALSNLDITNRNDPATTLVAKLIIQIAGDGERDPARLAKRAVEIVLGSS*
Ga0066905_1010028512	3300005713	Tropical Forest Soil	MSEVIHAPLGCGNVFGPEDIAQLAASLESALADLGIKNRNDPTTTLVAKLIIQLAKDGDRNPMSLAKRAIEIVRGST*
Ga0066905_1018721191	3300005713	Tropical Forest Soil	MSKLIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAQLIIQLARDGECDPARLAIRAIEIVRGSS*
Ga0066903_1001458562	3300005764	Tropical Forest Soil	MSEVIQASLAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATTLVAKLIIQLAQNGERDPTRLAKRASAIVRGSS*
Ga0066903_1037121402	3300005764	Tropical Forest Soil	MAEVIYPPLACGNVAFGPEDIALLAAGFEAALTNLNITNRNDPTTTAIAKLIVQLARNGERDPTRLAQRAIEIVRGSS*
Ga0066903_1091495651	3300005764	Tropical Forest Soil	MSEVIHALARRDVSFGPEDIARLATGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRG
Ga0075417_105477272	3300006049	Populus Rhizosphere	MPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0070716_1009178552	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVIHALARRDVSFGPEDIARLVAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0074064_117989811	3300006603	Soil	LRLGSPVPNLISTIQVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIKIVRGSS*
Ga0066665_114380871	3300006796	Soil	DVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0075435_1016273091	3300007076	Populus Rhizosphere	DDHFGWGSPVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0099827_106296431	3300009090	Vadose Zone Soil	MSEVIQALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0066709_1020439442	3300009137	Grasslands Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS*
Ga0099792_100287881	3300009143	Vadose Zone Soil	MSEVIQALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATIAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0114129_113437182	3300009147	Populus Rhizosphere	LISTIKVMPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0126374_103585841	3300009792	Tropical Forest Soil	MSEVIHALARCDVSFGPEDIAVLATGLESALTNLHITNRNDPATTVVAKLIIQLARDGECDPARLATRAIEIVRGSS*
Ga0126380_110728691	3300010043	Tropical Forest Soil	MSKLIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS*
Ga0126380_118272411	3300010043	Tropical Forest Soil	MSEVIHAPLARDGVSFGPEDIALLAAGLESALSNLDITNRNDPATTLVAKLIIQIAGDGERDPARL
Ga0126384_109262751	3300010046	Tropical Forest Soil	MSKLIHALARRDVSFGPEDIAVLAAGLESALINLHITNRNDPATTVVAKLIIQLARDGECDPARLAIRAIEIVRGSS*
Ga0126384_123203601	3300010046	Tropical Forest Soil	MMSEMIHAALARGGVSFGPEDITVLVAGLESALTNRDITNRNDPTASLVAKLIIQLARNGERDPTRLAKRAIAIVRGSS*
Ga0126382_120985951	3300010047	Tropical Forest Soil	MPEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS*
Ga0126373_128538081	3300010048	Tropical Forest Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS*
Ga0126370_120167971	3300010358	Tropical Forest Soil	PDLDHKVAPMSEVIHALARCDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0126376_124062162	3300010359	Tropical Forest Soil	MSKLIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAQLIIQLARDGECDPARLAIREIEIARGAS*
Ga0126379_101713831	3300010366	Tropical Forest Soil	IGDDHFGGDSPVPNLISTIKVATMSEVIHALARRDVSFGPEDIAVLAAGLESALINLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS*
Ga0126379_135827332	3300010366	Tropical Forest Soil	LDHKVAPMSEVIHALARCDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS*
Ga0126381_1014193143	3300010376	Tropical Forest Soil	MMSEMIHAALARGGVSFGPEDITVLVAGLESALTNLDITNRNDPTASLVAKLIIQLARNGERDPTRLAKRAIAIVRGSS*
Ga0126381_1034220171	3300010376	Tropical Forest Soil	MSELIHALARPDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS*
Ga0124850_10059103	3300010863	Tropical Forest Soil	MSEVIHALARRDVSFGPEDIARLATGLESALTNLRITNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRGSS*
Ga0153974_11481822	3300012180	Attine Ant Fungus Gardens	MSEVIHALARRDVSFGPEDIARLAAGFESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0137364_107817812	3300012198	Vadose Zone Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTDLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0137363_102172163	3300012202	Vadose Zone Soil	MSEVIHALLARGDVSFGPEDIALLAAGLESALTSLDITNRNDPTTTLVAKLIIHLAGNGERDPTRLAKRAIEIVRGSS*
Ga0137363_103074592	3300012202	Vadose Zone Soil	MSEVIQALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS*
Ga0137362_104806622	3300012205	Vadose Zone Soil	LISTIKVVPMSEVIHALVRRDVSFGPEDIAVLAAGLESALTDLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS*
Ga0137377_105892772	3300012211	Vadose Zone Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLA
Ga0137384_110709641	3300012357	Vadose Zone Soil	ALVIINDDHFGWGSPVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0137385_102668052	3300012359	Vadose Zone Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTDLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS*
Ga0137360_105172902	3300012361	Vadose Zone Soil	MSEVIHALLARGDVSFGPEDIALLAAGLESALTSLDTTNRNDPTTTLVAKLSIHLAGNGERDPTRLAKRAIEIVRGSS*
Ga0137361_104463193	3300012362	Vadose Zone Soil	WGSPVPNLISTIKVVPMSEVIHALVRRDVSFGPEDIAVLAAGLESALTDLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS*
Ga0134044_12293842	3300012395	Grasslands Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAI
Ga0137416_101585332	3300012927	Vadose Zone Soil	MSEVIARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATIAVAKLIIQLARDGECDPTRLAIRAIEIVRGFS*
Ga0137407_111423081	3300012930	Vadose Zone Soil	MSEVIQVLARRDVSFGPEDIAVLAAGLESALTNLHITNLNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS*
Ga0126375_103206321	3300012948	Tropical Forest Soil	MPEVIHALARRDVSFGPEDIAVLAAGFESALTNLHITNRNDPATTAVAKLIIQLARDGEYDPARLAIRAIEIVRGSS*
Ga0164298_111224592	3300012955	Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPT
Ga0126369_104288982	3300012971	Tropical Forest Soil	MSEVIHALARCDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTVVAKLIIQFARDGECEPARLATRAIEIVRGSS*
Ga0126369_106209922	3300012971	Tropical Forest Soil	MSEVIHALARRDVSFGPEDIARLATGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRGSS*
Ga0126369_117570293	3300012971	Tropical Forest Soil	MMSEMIHAALARGGVSFGPEDITLLVAGLESALTNLDITNRNDPTASLVKLIIQLARNGERDPTRLAKRAIAIVRGSS*
Ga0164309_112323112	3300012984	Soil	MSEVIHALARRDVSFGPEDIARLAAGFESALTNLRITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIAIVRGSS*
Ga0164305_120907531	3300012989	Soil	MSEVIQALARRDISFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRGSS*
Ga0182036_115625362	3300016270	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAI
Ga0182033_102460294	3300016319	Soil	MSEVIRASLARGDVSFGPEDIALLAAGLESALTNLEITNRNDPTMPAVAKLIIQLAQDGESDPTRLA
Ga0182032_106640842	3300016357	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSSCQSFGSRTL
Ga0182034_100906392	3300016371	Soil	MSEVIQAPLAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATALVAKLIIQLARNGERDPTRLAKRVSAIVRGSS
Ga0182034_106967622	3300016371	Soil	PNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0182034_119073461	3300016371	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAI
Ga0182040_104851182	3300016387	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSSYQSFGSRTL
Ga0182039_108320332	3300016422	Soil	NLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0182038_117896182	3300016445	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLATRAIE
Ga0066667_100176512	3300018433	Grasslands Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0210406_106482072	3300021168	Soil	MSEVIHALARRDVSFGPEDIARLAAGFESALTNLRITNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRGSS
Ga0210408_101661562	3300021178	Soil	MSEVIHALARRDVSFGPEDIARLVAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRGSS
Ga0213879_100164472	3300021439	Bulk Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0210409_114847272	3300021559	Soil	IHALARRDVSFGPEDIARLAAGFESALTNLRITNRNDPATTAVAKLIIQLARDGECDPARLAKRAIEIVRGSS
Ga0126371_109212711	3300021560	Tropical Forest Soil	MPEVIHALARRDVSFGPEDIAVLAAGFESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS
Ga0126371_129875061	3300021560	Tropical Forest Soil	MSEVIHAPLARDGVSFGPEDIALLAAGLESALSNLDITNRNDPATTLVAKLIIQIAGDGERDPARLAKRAVEIVLGSS
Ga0207684_110116791	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0207684_111098412	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FCKALVIIDGDHFGWGSSVPNLISIIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS
Ga0207693_111090741	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVIHALARRDVSFGPEDIARLVAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209240_10051485	3300026304	Grasslands Soil	MSEVIARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATIAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209468_11737501	3300026306	Soil	ALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209055_12904551	3300026309	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS
Ga0209239_10397971	3300026310	Grasslands Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAALAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209131_10579442	3300026320	Grasslands Soil	LISTIKVVPMSEVIARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209802_11305521	3300026328	Soil	MSEVIHALVRRDVSFGPEDIAVLAAGLESALTDLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS
Ga0257176_10040902	3300026361	Soil	LISTIKVVPMSEVIARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATIAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209214_10028922	3300027071	Forest Soil	MPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209689_12312372	3300027748	Soil	MSEVIHALVRRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAKRAIEIVHGSS
Ga0209465_101971442	3300027874	Tropical Forest Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209590_109665831	3300027882	Vadose Zone Soil	MSEVIQALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0209526_108231942	3300028047	Forest Soil	DVSFGPEDIARLAAGFESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS
Ga0318516_102048252	3300031543	Soil	MSEVIHALARCDVSFGPEDIAVLAAGLESALTNLHITNRNDPVTTVVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0318516_102446422	3300031543	Soil	LATIISAGGSLVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0318516_103825222	3300031543	Soil	MSEVIHALARCDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTVVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0318516_104212751	3300031543	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSSYQSFGSRTL
Ga0318541_100224973	3300031545	Soil	MSEVIQAPLAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATALVAKLIIQLARNGERDPTRLAKRASAIVRGSS
Ga0318538_102597631	3300031546	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRG
Ga0318538_105872531	3300031546	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTR
Ga0318528_107307911	3300031561	Soil	PNLISTIQVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318573_100531253	3300031564	Soil	IIDDDHCGWGSGVPNLISTIQVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0310915_104626342	3300031573	Soil	MSEVIRASLARGDVSFGPEDIALLAAGLESALTNLEITNRNDPTMPAVAKLIIQLARNGERDPTRLAKRAIEIMRGSS
Ga0318555_106109312	3300031640	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEI
Ga0318572_104391062	3300031681	Soil	LISTIKVVPMSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0306917_113217081	3300031719	Soil	LRPGSPVPNLISTIQVVPMSEVIHALARRDVSFGPDDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS
Ga0318493_101760881	3300031723	Soil	LAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATALVAKLIIQLARNGERDPTRLAKRASAIVRGSS
Ga0318493_102718002	3300031723	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIG
Ga0306918_108781692	3300031744	Soil	MSEVIHAALARGDVSFAPEDIALLATGLESALANLAITNRNDPTTTAVAKLIIQLARNGERDPTRLAKRAVEIVRGSN
Ga0318502_107179862	3300031747	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSSY
Ga0318492_101447641	3300031748	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSSYQS
Ga0318537_100531832	3300031763	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRQAIRAIEIVRGSSYQSFGSRTL
Ga0318537_103133431	3300031763	Soil	ALVIIDDDHCGWGSGVPNLISTIQVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318554_108329572	3300031765	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLA
Ga0318509_101342592	3300031768	Soil	LATIISAGGSLVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0318566_102393431	3300031779	Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318547_100765534	3300031781	Soil	SFEPEDIALLAAGLESALTNLDITNRNDPTITLVAKLIIQLAKNGDRNPTSLAKRAIGIVRGSS
Ga0318523_102899192	3300031798	Soil	MSEVIQAPLAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATALVAKLIIQIARNGERDPTRLAKRASAIVRGSS
Ga0318497_101280632	3300031805	Soil	LISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0310917_103722992	3300031833	Soil	LATIISAGGSLVPNLISTIKVVPMSEVIHALARRDVSFGQEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0310917_107697751	3300031833	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIV
Ga0318517_104357942	3300031835	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIE
Ga0306919_100887792	3300031879	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIE
Ga0306919_113830762	3300031879	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLA
Ga0318544_100745853	3300031880	Soil	LATIISAGGSLVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318544_101994962	3300031880	Soil	IQAPLAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATALVAKLIIQLARNGERDPTRLAKRASAIVRGSS
Ga0318536_100401153	3300031893	Soil	GSGVPNLISTIQVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318551_107199262	3300031896	Soil	SEVIQAPLAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATALVAKLIIQLARNGERDPTRLAKRASAIVRGSS
Ga0318520_100902981	3300031897	Soil	MSEVIQAPLAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATALVAKLIIQLARNGERDPTRLAKR
Ga0318520_104521122	3300031897	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRG
Ga0318520_107169512	3300031897	Soil	VPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318520_111026422	3300031897	Soil	MSEVIHALARRDVSFGPDDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS
Ga0310912_106078802	3300031941	Soil	LISTIQVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0310916_102261382	3300031942	Soil	MSEVIHALARRDVSFGPEDIAVLAARLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0310913_107232391	3300031945	Soil	LVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0310910_112513152	3300031946	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRL
Ga0306922_116611811	3300032001	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEI
Ga0318507_103109781	3300032025	Soil	VSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0310911_103873162	3300032035	Soil	MSEVIRASLARGDVSFGPEDIALLAAGLESALTNLEITNRNDPTMPAVAKLIIQLARNGERDPTRLAKRAIE
Ga0318545_102193881	3300032042	Soil	PVPNLISTIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318558_102467022	3300032044	Soil	PMSEVIQAPLAPYDVSFGPEDIALLAVGLEAALTTLGITNSNDPATALVAKLIIQLARNGERDPTRLAKRASAIVRGSS
Ga0318570_103804252	3300032054	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSSYQ
Ga0318504_106145262	3300032063	Soil	LRLGSGVPNLISTMQVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318553_102110841	3300032068	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS
Ga0318525_104592741	3300032089	Soil	SEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0318518_100575072	3300032090	Soil	MSEVIHALARREVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLATRAIEIVRGSS
Ga0318518_105841842	3300032090	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPARLAIRAIEIVRGSS
Ga0318540_102105402	3300032094	Soil	MSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHITNRNDPATTAVAKLIIQLARDGECDPTRLAIRA
Ga0310914_108881901	3300033289	Soil	TIKVVPMSEVIHALARRDVSFGPEDIAVLAAGLESALTNLHIKNRNDPATTAVAKLIIQLARDGECDPTRLAIRAIEIVRGSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041377

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences