Metagenome / Metatranscriptome Family F041347

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041347
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	50 residues
Representative Sequence	MSDALQALLDSGALYLALGALLCIVLGVGAARRLFQGAKKIEPPQRRKD
Number of Associated Samples	116
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.14 %
% of genes near scaffold ends (potentially truncated)	24.38 %
% of genes from short scaffolds (< 2000 bps)	53.75 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.125 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (28.750 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.65% β-sheet: 0.00% Coil/Unstructured: 49.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF03597	FixS	5.00
PF01546	Peptidase_M20	3.75
PF13180	PDZ_2	3.75
PF02668	TauD	3.75
PF03401	TctC	3.12
PF00571	CBS	2.50
PF01914	MarC	2.50
PF05685	Uma2	2.50
PF04392	ABC_sub_bind	1.88
PF12399	BCA_ABC_TP_C	1.88
PF13763	DUF4167	1.88
PF13594	Obsolete Pfam Family	1.25
PF02653	BPD_transp_2	1.25
PF00108	Thiolase_N	1.25
PF01979	Amidohydro_1	1.25
PF13365	Trypsin_2	0.62
PF01425	Amidase	0.62
PF01370	Epimerase	0.62
PF04185	Phosphoesterase	0.62
PF08734	GYD	0.62
PF05711	TylF	0.62
PF03147	FDX-ACB	0.62
PF14023	DUF4239	0.62
PF01740	STAS	0.62
PF04972	BON	0.62
PF05545	FixQ	0.62
PF13545	HTH_Crp_2	0.62
PF06439	3keto-disac_hyd	0.62
PF01464	SLT	0.62
PF15887	Peptidase_Mx	0.62
PF13493	DUF4118	0.62
PF12680	SnoaL_2	0.62
PF01734	Patatin	0.62
PF13548	DUF4126	0.62
PF13561	adh_short_C2	0.62
PF00496	SBP_bac_5	0.62
PF08843	AbiEii	0.62
PF03976	PPK2	0.62
PF00072	Response_reg	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG3197	Cytochrome oxidase maturation protein, CcoS/FixS family	Posttranslational modification, protein turnover, chaperones [O]	5.00
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.75
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.12
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	2.50
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	2.50
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.88
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.25
COG4736	Cbb3-type cytochrome oxidase, subunit 3	Energy production and conversion [C]	0.62
COG0072	Phenylalanyl-tRNA synthetase beta subunit	Translation, ribosomal structure and biogenesis [J]	0.62
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.62
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.62
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.62
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.62
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.62
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.62
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.62
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
All Organisms	root	All Organisms	46.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
cellular organisms	root	All Organisms → cellular organisms	46.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.00 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	3.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.25 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.12 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.25 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.12 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.75 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.25 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.12 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.50 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.88 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.88 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	1.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.25 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.12 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.88 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.88 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.25 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.62 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.12 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.88 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.88 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.88 %
Bradyrhizobium sp. WD16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	1.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.25 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.62 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001081\|JGI12662J13196_1002714	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300001081\|JGI12662J13196_1002838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1300	Open in IMG/M
3300001081\|JGI12662J13196_1005889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	980	Open in IMG/M
3300002245\|JGIcombinedJ26739_100130894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2367	Open in IMG/M
3300002245\|JGIcombinedJ26739_101851939	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	505	Open in IMG/M
3300003505\|JGIcombinedJ51221_10409309	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300003505\|JGIcombinedJ51221_10450170	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300004152\|Ga0062386_100295688	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300004152\|Ga0062386_100961404	Not Available	707	Open in IMG/M
3300004152\|Ga0062386_101768442	Not Available	516	Open in IMG/M
3300005206\|Ga0068995_10018731	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005332\|Ga0066388_100206341	All Organisms → cellular organisms → Bacteria → Proteobacteria	2589	Open in IMG/M
3300005332\|Ga0066388_100289317	All Organisms → cellular organisms → Bacteria → Proteobacteria	2282	Open in IMG/M
3300005332\|Ga0066388_100424196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1973	Open in IMG/M
3300005332\|Ga0066388_101389331	Not Available	1219	Open in IMG/M
3300005332\|Ga0066388_102668644	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300005332\|Ga0066388_103798189	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005363\|Ga0008090_15169366	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300005569\|Ga0066705_10918224	Not Available	519	Open in IMG/M
3300005764\|Ga0066903_100154575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3306	Open in IMG/M
3300005764\|Ga0066903_100198783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2994	Open in IMG/M
3300005764\|Ga0066903_100439909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2172	Open in IMG/M
3300005764\|Ga0066903_100658799	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300005764\|Ga0066903_100807444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1679	Open in IMG/M
3300005764\|Ga0066903_101135977	Not Available	1444	Open in IMG/M
3300005764\|Ga0066903_106752427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	596	Open in IMG/M
3300005764\|Ga0066903_107088106	Not Available	581	Open in IMG/M
3300006176\|Ga0070765_100020767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4905	Open in IMG/M
3300009088\|Ga0099830_10062625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2667	Open in IMG/M
3300009089\|Ga0099828_10193273	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1814	Open in IMG/M
3300009610\|Ga0105340_1463131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	566	Open in IMG/M
3300010037\|Ga0126304_11283065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	502	Open in IMG/M
3300010040\|Ga0126308_11245618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300010048\|Ga0126373_10548017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1204	Open in IMG/M
3300010360\|Ga0126372_11046512	Not Available	831	Open in IMG/M
3300010366\|Ga0126379_10377045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1458	Open in IMG/M
3300010398\|Ga0126383_11753857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	709	Open in IMG/M
3300010398\|Ga0126383_13650150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	503	Open in IMG/M
3300015371\|Ga0132258_10702749	All Organisms → cellular organisms → Bacteria	2545	Open in IMG/M
3300015373\|Ga0132257_103898753	Not Available	543	Open in IMG/M
3300015374\|Ga0132255_101039461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1230	Open in IMG/M
3300016270\|Ga0182036_10825473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	756	Open in IMG/M
3300016294\|Ga0182041_11721964	Not Available	580	Open in IMG/M
3300016319\|Ga0182033_11751714	Not Available	563	Open in IMG/M
3300016319\|Ga0182033_12140607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300016341\|Ga0182035_12032438	Not Available	522	Open in IMG/M
3300016357\|Ga0182032_10316271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1238	Open in IMG/M
3300016357\|Ga0182032_11705375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	549	Open in IMG/M
3300016387\|Ga0182040_10855474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300016387\|Ga0182040_11299044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	614	Open in IMG/M
3300016404\|Ga0182037_10472356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1047	Open in IMG/M
3300016422\|Ga0182039_11743981	Not Available	570	Open in IMG/M
3300017943\|Ga0187819_10325531	Not Available	891	Open in IMG/M
3300017944\|Ga0187786_10384743	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300017946\|Ga0187879_10696465	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300017947\|Ga0187785_10246352	Not Available	799	Open in IMG/M
3300017955\|Ga0187817_10485721	Not Available	788	Open in IMG/M
3300017974\|Ga0187777_10518000	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	835	Open in IMG/M
3300018033\|Ga0187867_10110432	Not Available	1597	Open in IMG/M
3300018040\|Ga0187862_10345684	Not Available	926	Open in IMG/M
3300018042\|Ga0187871_10875960	Not Available	502	Open in IMG/M
3300018060\|Ga0187765_10063211	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300018067\|Ga0184611_1017662	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300018072\|Ga0184635_10009536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3341	Open in IMG/M
3300018073\|Ga0184624_10122031	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300018081\|Ga0184625_10005806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5529	Open in IMG/M
3300018081\|Ga0184625_10491901	Not Available	621	Open in IMG/M
3300020583\|Ga0210401_11059231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	670	Open in IMG/M
3300021178\|Ga0210408_11073167	Not Available	620	Open in IMG/M
3300021403\|Ga0210397_11293168	Not Available	567	Open in IMG/M
3300021405\|Ga0210387_10019641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5256	Open in IMG/M
3300021559\|Ga0210409_10892630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	763	Open in IMG/M
3300021559\|Ga0210409_11114214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	664	Open in IMG/M
3300021560\|Ga0126371_13667502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	518	Open in IMG/M
3300021861\|Ga0213853_10647180	Not Available	611	Open in IMG/M
3300027521\|Ga0209524_1067120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	754	Open in IMG/M
3300027610\|Ga0209528_1005157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2772	Open in IMG/M
3300027651\|Ga0209217_1215564	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	511	Open in IMG/M
3300027812\|Ga0209656_10052065	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2306	Open in IMG/M
3300027824\|Ga0209040_10035927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3090	Open in IMG/M
3300027862\|Ga0209701_10057086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2492	Open in IMG/M
3300028047\|Ga0209526_10621010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	690	Open in IMG/M
3300031561\|Ga0318528_10458340	Not Available	685	Open in IMG/M
3300031744\|Ga0306918_10795318	Not Available	739	Open in IMG/M
3300031770\|Ga0318521_10347181	Not Available	879	Open in IMG/M
3300031771\|Ga0318546_10097561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1923	Open in IMG/M
3300031819\|Ga0318568_10347666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	923	Open in IMG/M
3300031879\|Ga0306919_10905304	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300031890\|Ga0306925_10294699	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300031890\|Ga0306925_11628694	Not Available	626	Open in IMG/M
3300031910\|Ga0306923_11396740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	737	Open in IMG/M
3300031910\|Ga0306923_11805659	Not Available	628	Open in IMG/M
3300031910\|Ga0306923_12504980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WD16	509	Open in IMG/M
3300031942\|Ga0310916_10626927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300031946\|Ga0310910_10480339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	986	Open in IMG/M
3300031946\|Ga0310910_11489123	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300031954\|Ga0306926_11094197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	943	Open in IMG/M
3300032025\|Ga0318507_10548389	Not Available	503	Open in IMG/M
3300032044\|Ga0318558_10648024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	528	Open in IMG/M
3300032059\|Ga0318533_10040424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3066	Open in IMG/M
3300032076\|Ga0306924_10702391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1136	Open in IMG/M
3300032261\|Ga0306920_100241741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2694	Open in IMG/M
3300032261\|Ga0306920_101491314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	966	Open in IMG/M
3300034090\|Ga0326723_0443489	Not Available	592	Open in IMG/M
3300034113\|Ga0364937_132752	Not Available	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.12%
Host-Associated	Host-Associated	1.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.62%
Aquatic	Environmental → Aquatic	17.50%
Plants	Host-Associated → Plants	1.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.50%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Sediment	Environmental → Aquatic → Sediment	4.38%
Peat	Environmental → Terrestrial → Peat	2.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.88%
Marine	Environmental → Aquatic → Marine	0.62%
Floodplain	Environmental → Terrestrial → Floodplain	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.25%
Loam	Environmental → Terrestrial → Soil → Loam	22.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.62%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.62%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.25%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.25%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.25%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.25%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.25%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.62%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.62%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.62%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12662J13196_10027142	3300001081	Forest Soil	MSDTLQALLDSGALYLAVGAVICIVLGIGAAKRLFQRGNKIKTPLE*
JGI12662J13196_10028382	3300001081	Forest Soil	MSDILQALLDSGALYLALGAILCIVVGVGAARRLFQGAKKIEPPPRRND*
JGI12662J13196_10058892	3300001081	Forest Soil	MKMSDTFQVLLDSGAIYLALGAVICIMLGVGAVRRLFRGASKIKTPKRGEEHN*
JGIcombinedJ26739_1001308945	3300002245	Forest Soil	MKMSDTFQVLLDSGAIYLALGAVICIMLGVGAVRRLFRGASKIKTPXRGEEHNXS*
JGIcombinedJ26739_1018519391	3300002245	Forest Soil	MSDALQALLDSGALYLALGALLCIVLGVGAARRLFQGAKKIEPPQRRKD*
JGIcombinedJ51221_104093092	3300003505	Forest Soil	RMSDTLQALLDSGALYLAVGAVICIVLGVGAAKRLFQRGNKIKTPLE*
JGIcombinedJ51221_104501702	3300003505	Forest Soil	RMSDTLQALLDSGALYLAVGAVICIVLGVGAAKRLFQEGNKIKTPHQE*
Ga0062385_104337112	3300004080	Bog Forest Soil	MTEAFGALLDSGLLYFVVGAVICVLLGVGAVYRLFQGASKAEPPDPPEHPRHKPRHKH*
Ga0062385_105720982	3300004080	Bog Forest Soil	MTNAFGALLDSGLLYFVIGAVICVLLGAGAVYRLFLGASKAEPPDPPKHRRHKH*
Ga0062385_107368661	3300004080	Bog Forest Soil	MSDAFQVLLDSGWLYFAAGAVICVILGVGALKRLFQGAKKAEPPDPPHRPRHKH*
Ga0062389_1027919821	3300004092	Bog Forest Soil	MSDAFQALLDSGLLYFAVGAVICVILGIGAAKRLFEGAKKAEPPDPQDRPRHKH*
Ga0062389_1039462461	3300004092	Bog Forest Soil	MTNMFGVLLDSGVLWLGIGAVICVLLGVGAVRRLFQGAAKAEPPDPPEHRHKHKH*
Ga0062386_1002956883	3300004152	Bog Forest Soil	MSDTLQALLDSGALYLALGAVICIALGIGAAKRLFQGASKINGSQRRKD*
Ga0062386_1009614041	3300004152	Bog Forest Soil	TFQVLLDSGAIYLALGAVISIMLGVGAVRRLFRGASKIKNP*
Ga0062386_1017684421	3300004152	Bog Forest Soil	MSDALQALLDSGALYLGLGAVICIALGVGAVRRLFQGAKKIEPPQRRKD*
Ga0068995_100187311	3300005206	Natural And Restored Wetlands	MAQAFQVLLDSGGLYLALGAVLCIVIGAGAAKRLFQGAKRAEPPDPHRRAPRKD*
Ga0066388_1002063412	3300005332	Tropical Forest Soil	MTETFQVLLDSGAIYLALGAVLCIVVGAVAVRRLFQGASKIKNPNGLKDR*
Ga0066388_1002893172	3300005332	Tropical Forest Soil	MSDTLQALLDSGALYLVFGAVICIVLGIGAARRLFKGANKIKNPE*
Ga0066388_1004241961	3300005332	Tropical Forest Soil	DKCVGQSDWDQMIMSETLQVLLDSGAIYLALGAVLCIVLGVGAVRRLFRGASKLKDPDRMKGR*
Ga0066388_1005598123	3300005332	Tropical Forest Soil	MSDAFQIMLDSGWLYFAAGAVICIILGVGALKRLFQGAKKAEPPDPRPRHKH*
Ga0066388_1013893312	3300005332	Tropical Forest Soil	QALLDSGGLYLALGAVLCIVVGAGAARRLFQGAKRAEPPDPQYRRPRKD*
Ga0066388_1026686442	3300005332	Tropical Forest Soil	MSDVLQAMLDSGALYLALGAIICIVLGIGAVKRLFQGARKIEPPP*
Ga0066388_1037981892	3300005332	Tropical Forest Soil	MNDVLQALLDSGALYLVVGAILCIVIGVGAARRLFQGAKKIEQQQEPQRRRD*
Ga0066388_1062576171	3300005332	Tropical Forest Soil	MTDAFGALLDSGVLYLAVGAVICVILGIGAAKRLFQGAAKAEPPDPEEHPRHKR*
Ga0008090_151693662	3300005363	Tropical Rainforest Soil	MGMSDALQILFDSGALYLALGAVICIALGMRATGRLFQGADKI
Ga0066705_109182241	3300005569	Soil	MSDTLQALLDSGALYLAVGAVICIVLGVGAAKRLFQ
Ga0066903_1001545754	3300005764	Tropical Forest Soil	MGQAFQALLDSGGLYLALGAVLCIVVGAGAARRLFQGAKRAEPPDPQYRRPRKD*
Ga0066903_1001987832	3300005764	Tropical Forest Soil	MIMSETLQVLLDSGAIYLALGAVLCIVLGVGAVRRLFRGASKLKDPDRMKDR*
Ga0066903_1004399092	3300005764	Tropical Forest Soil	MNDTLQALLDSGALYLALGALICIVLGAGAARRLFRGASKFDGPERKD*
Ga0066903_1006587992	3300005764	Tropical Forest Soil	MSDTLQMLLDSGALYLALAAIICVAIGASAVKRLFHDANKFKTPQRGKERERIDNQ*
Ga0066903_1008074443	3300005764	Tropical Forest Soil	MSDTLQALLDSGALYLVFGAVICIVLGIGAARRLFKGANKVKNPE*
Ga0066903_1011359772	3300005764	Tropical Forest Soil	MSDTLQALLDSGALYLALGAIICVVLGAGAARRLFRGASKFDTPERKD*
Ga0066903_1067524273	3300005764	Tropical Forest Soil	MSDTLQVLLDSGALYLVFGALICIVLGIGAVWRLFKGANKIKNPE*
Ga0066903_1070881061	3300005764	Tropical Forest Soil	MSDALQALLDSGVLYFALGALICIVLGVGAARRLFQGASKIKTP
Ga0066903_1076437662	3300005764	Tropical Forest Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHKH*
Ga0070766_103844922	3300005921	Soil	MSDAFGAMLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPDPHDPPRHKH*
Ga0075024_1006032572	3300006047	Watersheds	MSDAFQIMLDSGWLYFAAGAVICVILGVGALKRLFQGAKKAEPP
Ga0070712_1005426304	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHR
Ga0070712_1014853742	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTDAFGAMLDSGVLYLAVGAVICVILGVGAARRLFQGAAKAEPPDPEDHPRHKR*
Ga0070765_1000207673	3300006176	Soil	MSDTLQALLDSGALYLAVGAVICIVLGVGAAKRLFQEGNKIKTPHQE*
Ga0070765_1004438692	3300006176	Soil	MSDAFQAMLDSGLLYFVVGAVICVILGIGAAKRLFQGAKKAEPPDPQERPRHKH*
Ga0074047_114534001	3300006576	Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPRHKH*
Ga0099830_100626255	3300009088	Vadose Zone Soil	MDMSDALQALLDSGALYLALGALLCIVLGVGAARRLFQGAKKIEPPQRRKD*
Ga0099828_101932733	3300009089	Vadose Zone Soil	MDMSDALQALLDSGALYLALGALLCIVLGVGAAGRLFQGAKKIEPPQRRKD*
Ga0105340_14631312	3300009610	Soil	MDMNDALQALLDSGGLYLALGAVLCIVLGVGAARRMFQGAKKIETPRRRKD*
Ga0126304_112830652	3300010037	Serpentine Soil	MSEAFQSLLDSGALYLILGAVICLVIGIGAVRRLFRGARRVE*
Ga0126308_112456181	3300010040	Serpentine Soil	MSEAFQSLLDSGALYLILGAVICLVIGIGAVRRLFRGAR
Ga0126373_105480172	3300010048	Tropical Forest Soil	MGQAFQALLDLGGLYLALGAVLCIVVGAGAARRLFQGAKRAEPPDPQYRRPRKD*
Ga0074046_105395141	3300010339	Bog Forest Soil	MLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPDPHDS
Ga0074044_102401243	3300010343	Bog Forest Soil	MLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPDPHD
Ga0126372_110465122	3300010360	Tropical Forest Soil	MGQAFQALLDSGGLYLALGAVLCIVVGAGAAKRLFQGAKRAEPPDPQYRRPRKD*
Ga0126379_103770453	3300010366	Tropical Forest Soil	MSDTLQVLLDSGALYLVFGAVICIVLGIGAARRLFKGANKIKNPE*
Ga0136449_1000375149	3300010379	Peatlands Soil	MLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPDPHDPPQHKH*
Ga0126383_117538571	3300010398	Tropical Forest Soil	MSDTLQALLDSGALYLVFGAVICIVLGIGAVWRLFKGANKLKNPE*
Ga0126383_136501502	3300010398	Tropical Forest Soil	LDSGALYLVFGAVICIVLGIGAARRLFKGANKIKNPE*
Ga0137388_116707542	3300012189	Vadose Zone Soil	MLDSGVLYLAVGAVICVLLGIGAVKRLFQGAKKAEPPDPQDHPRRKH*
Ga0181523_102303702	3300014165	Bog	MLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPDPHDSPRHKH*
Ga0181528_103888412	3300014167	Bog	MTNAFGAMLDSGVLYLAVGAVICVLLGVGAARRLFQGASKAEPPDPPEHRHKH*
Ga0182030_106924762	3300014838	Bog	MGNAFQVLLDSGLLYFIIGAVICVILGVGAVRHLFQGAKRAEPRDPKHDTRGGP*
Ga0182030_109681041	3300014838	Bog	KEDAMSNAIGAMLDSGVLYLAVGAVICVLLGVGAARRLFQGAKKAEPVDPPEHPRRKH*
Ga0132258_107027493	3300015371	Arabidopsis Rhizosphere	MGQAFQALLDSGGLYLALGAVLCIVVGAGAAKRLFQGAKRAEPPDPQYR
Ga0132257_1038987532	3300015373	Arabidopsis Rhizosphere	MSDALQAMLDSGALYLALGAIICIALGIGAVKRLFQGARKIEPPQ*
Ga0132255_1010394611	3300015374	Arabidopsis Rhizosphere	MSDALQAMLDSGALYLALGAIICIVLGIGAVKRLFQGARKIEPPQ*
Ga0182036_108254732	3300016270	Soil	MSDTLQALLDSGALYLVFGAVICIVLGIAAARRLFKGANKIKDPE
Ga0182041_117219642	3300016294	Soil	MSDTLQALLDSGALYLALGAIICVVLGAGAARRLFRGASKFDTPERKD
Ga0182033_117517142	3300016319	Soil	DTLQALLDSGALYLALGALICIVLGAGAARRLFRGASKFDGPERKD
Ga0182033_121406072	3300016319	Soil	MSDTLQALLDSGTLYLVFGALICIVLGIGAAQRLFKGANKIKNPE
Ga0182035_120324383	3300016341	Soil	MSDTLQAMLDSGALYLALGALICIVLGAGAARRLFQ
Ga0182032_103162712	3300016357	Soil	LLDSGALYLALGAPICIVLGAGALRRLFRGASKFDGPERKD
Ga0182032_117053753	3300016357	Soil	MSDTLQAMLDSGALYLALGALICIVLGAGAARRLFQGASKI
Ga0182040_105413242	3300016387	Soil	MSDAFQALLDSGLLYFAIGAVICVILGVGAAKRLFQGAKKAEPPDPQHRPKHKH
Ga0182040_108554742	3300016387	Soil	MSDTLQMLLDSGALYLALGAIICVVLGVGAVKRLFHEANKFKTPQRGKEKRRIADR
Ga0182040_112990442	3300016387	Soil	QVLLDSGALYLVFGALICIVLGIGAIWRLFKGANKTKNPE
Ga0182037_104723561	3300016404	Soil	MSYTLQALLDSGALYLVFGALICIVLGIGAARRLFKGANKIKNPE
Ga0182039_117439811	3300016422	Soil	MSDTLQVLLDSGALYLVFGAVICIVLGIGAARRLFKGANKIKDPE
Ga0182038_100360152	3300016445	Soil	MSDAFQIMLDSGWLSFVAGAVICVNLGVGAIKRLFQGAKKAEPPDPQHRPKHKH
Ga0187819_103255311	3300017943	Freshwater Sediment	RRERLKMDDALQTLLDSGWLFLAFGAVICIFLGIGPARRLFQGAKRAEPPDLGR
Ga0187786_103847431	3300017944	Tropical Peatland	HGSNAASATRRKPLKMGQSFQALLDSGGLYLALGAVICIVIGIGAVRRLFQGAKRAEPPDPRR
Ga0187879_106964651	3300017946	Peatland	GWLYLALGAVICIFLGVGAARRLFQGAKRAEPPDPDRRLRRKD
Ga0187785_102463521	3300017947	Tropical Peatland	MGQAFQALLDSGGLYLALGAVLCIVVGAGAARRLFQGAKRAEPPDPQYRRPRKD
Ga0187817_104857211	3300017955	Freshwater Sediment	MDDALQTLLDSGWLFLAFGAVICIFLGIGPARRLFQGAKRAEPPDLGR
Ga0187777_105180002	3300017974	Tropical Peatland	MSDTLQAMLDSGALYLAFGALICIVLGAGAARRLFQGASKIDGSRRRKD
Ga0187782_112002531	3300017975	Tropical Peatland	MTNAFGVLLDSGVLWLGVGAVICVLLGVGAVRRLFQGAAKAEPPDPPKRRHKH
Ga0187805_104739671	3300018007	Freshwater Sediment	MSDALQVMLDSGGLYLAIGAVICLILGVGAARRLFQGAKRAEPADPRSRRK
Ga0187867_101104323	3300018033	Peatland	MQMGHSFQFLLDSGWLYLALGAVICIFLGVGAARRLFQGAKRAEPPDPDRRLRRKD
Ga0187862_103456841	3300018040	Peatland	MQMGHSFQFLLDSGWLYLALGAVICIFLGVGAARRLFQGAKRAEPPDPDR
Ga0187871_108759601	3300018042	Peatland	MSDAFGAMLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPP
Ga0187765_100632111	3300018060	Tropical Peatland	MGQAFQALLDSGGLYLALGAVLCIVVGAGAAKRLFQGAKRAEPPDPQYRRPRKD
Ga0187765_106144981	3300018060	Tropical Peatland	MSDAFQIMLDSGWLYFAAGAVICVILGVGALKRLFQGAKKAEPPDPRPRHKH
Ga0187784_103470843	3300018062	Tropical Peatland	NAFQTLLDSGWLFLALGAVICIFLGVGAARRLFQGAKRAEPPDPSR
Ga0187784_104730612	3300018062	Tropical Peatland	MTNAFGVLLDSGVLWLAVGAVICVILGVGAARRLFQGAAKAEPPDPPERRHKH
Ga0184611_10176624	3300018067	Groundwater Sediment	MGQAFQVLLDSGGLYLALGAILCIIIGIGAAKRLFQGAKRAEPPAPQRRPPRQG
Ga0184635_100095364	3300018072	Groundwater Sediment	MGQAFQVLLDSGGLYLALGAILCIVIGIGAAKRLFQRAKRAEPPAPQRRPPRQG
Ga0184624_101220313	3300018073	Groundwater Sediment	GTRKGKPLKMGQAFQVLLDSGGLYLALGAILCIVIGIGAAKRLFQGAKRAEPPAPQRRPPRQG
Ga0184625_100058065	3300018081	Groundwater Sediment	MGQAFQVLLDSGGLYLALGAILCIVIGIGAAKRLFQGAKRAEPPAPQRRPPRQG
Ga0184625_104919012	3300018081	Groundwater Sediment	MDVSDALQSLLDSGALYLALGALLCIVLGIGAARRLFQG
Ga0210401_110592311	3300020583	Soil	MSDTLQALLDSGALYLAVGAVICIVLGVGAAKRLFQEGN
Ga0210408_110731672	3300021178	Soil	MSDTLQALLDSGALYLAVGAVICVVLGVGAAKRLFQRGNKIKTPLE
Ga0210388_102052161	3300021181	Soil	MSDAFGAMLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPDPHDPPRHKH
Ga0210393_116072111	3300021401	Soil	RLRMSDAFGAMLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPDPHDSPRHKH
Ga0210397_112931681	3300021403	Soil	MSDTLQALLDSGALYLAVGAVICIVLGVGAAKRLFQRGNKIKTPLE
Ga0210387_100196416	3300021405	Soil	MSDTLQALLDSGALYLAVGAVICIVLGVGAAKRLFQEGNKIKTPHQE
Ga0210387_108409531	3300021405	Soil	DSGVLWLGIGAVICLLLGVGAVRRLFEGAAKAEPPDPPERRHRH
Ga0210402_101885432	3300021478	Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGALKRLFQGAKKAEPPDPQHRPRHKH
Ga0210409_108926301	3300021559	Soil	MSDILQALLDSGALYLALGAILCIVVGVGAARRLFQGAKKIE
Ga0210409_111142141	3300021559	Soil	MSDTLQALLDSGALYLAVGAVICIVLGVGAAKRLFQR
Ga0126371_136675022	3300021560	Tropical Forest Soil	MSDTLQALLDSGALYLVFGAVICIVLGIGAARRLFKGANKLKNPE
Ga0213853_106471802	3300021861	Watersheds	MSDAFGAMLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPD
Ga0207693_106206722	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTDAFGAMLDSGVLYLAVGAVICVILGVGAARRLFQGAAKAEPPDPEDHPRHKR
Ga0209524_10671201	3300027521	Forest Soil	MSDILQALLDSGALYLALGAILCIVVGVGAARRLFQGAK
Ga0209528_10051573	3300027610	Forest Soil	MSDTLQALLDSGALYLAVGAVICIVLGIGAAKRLFQRGNKIKTPLE
Ga0209217_12155642	3300027651	Forest Soil	LDMSDILQALLDSGALYLALGAILCIVVGVGAARRLFQGAKKIEPPPRRND
Ga0209656_100520654	3300027812	Bog Forest Soil	MSGMNDTLQVLLDSGALYLALGAVICIALGIGAARRLFQGASKINSSRRRKD
Ga0209040_100359273	3300027824	Bog Forest Soil	MSGMNDTLQVLLDSGALYLALGAAICIALGIGAARRLFQGASKINSSRRRKD
Ga0209701_100570864	3300027862	Vadose Zone Soil	MSDALQALLDSGALYLALGALLCIVLGVGAARRLFQGAKKIEPPQRRKD
Ga0209624_103243731	3300027895	Forest Soil	MSDAFQAMLDSGLLYFVVGAVICVILGIGAAKRLFQGAKKAEPPDPQERPRHKH
Ga0209006_100201983	3300027908	Forest Soil	MTNAFGVLLDSGVLWLGIGAVICLLLGVGAVRRLFEGAAKAEPPDPPERRHRH
Ga0209526_106210101	3300028047	Forest Soil	MSDVLQALLDSGALYLGLGAIICIVLGVGAVRRLFQGAKKMEPPQRRKD
Ga0302234_101298983	3300028773	Palsa	MSNAIGAMLDSGVLYLAVGAVICVLLGVGAARRLFQGAKKAEPVDPPEHPRRKH
Ga0318534_103495802	3300031544	Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHKH
Ga0318541_102621742	3300031545	Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGALKRLFQGAKNAEPPDPQHRPRHKH
Ga0318528_104583401	3300031561	Soil	MNDTLQALLDSGALYLALGALICIVLGAGAARRLFRGASKFDGPE
Ga0318561_106676491	3300031679	Soil	QGKSLGAREGRDFQMSDAFQIMLDSGWLYFAAGAVICVILGVGALKRLFQGAKKAEPPDQPHRPRHKH
Ga0318561_107362981	3300031679	Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHK
Ga0310686_1108787922	3300031708	Soil	RTRRNAPASDRTWPRGRKTLQMSDAFQAMLDSGLLYFVVGAVICVILGIGAAKRLFQGAKKAEPPDPQERPRHKH
Ga0318500_106641412	3300031724	Soil	LQMSDSFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHKH
Ga0302321_1021678671	3300031726	Fen	MSDAFQALLDSGLLYFVVGAVICVILGVGAAKRLFQGAKKAEPPDPRDRPRHKH
Ga0306918_107953181	3300031744	Soil	MSDALQALLDSGVLYFALGALICIVLGAGAARRLFQGASKIKTPPHSRSNRRQRHPG
Ga0318492_105680862	3300031748	Soil	LQMSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHKH
Ga0318521_103471811	3300031770	Soil	MSDTLQAMLDSGALYLALGALICIVLGAGAGRRLFQGASR
Ga0318546_100975613	3300031771	Soil	MGELGLKEMHMSDTLQAMLDSGALYLALGALICIVLGAGAARRLF
Ga0318546_101863431	3300031771	Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQQRPKHKH
Ga0318568_103476662	3300031819	Soil	MNDTLQALLDSGALYLALGALMCIVLGAGAARRLFRGASKFDGPERKD
Ga0306919_109053042	3300031879	Soil	MNDTLQALLDSGALYLALGALICIVLGAGAARRLFRGASKFDGPERKD
Ga0306925_102946992	3300031890	Soil	MSDTLQMLLDSGALYLALGAIICVALGVGAVKRLFHDANKFKAPQRGKERK
Ga0306925_116286941	3300031890	Soil	MSDTLQAMLDSGALYLALGALICIVLGAGAARRLFQGASRIHGSRRRK
Ga0302322_1019043821	3300031902	Fen	FQALLDSGLLYFVVGAIICVILGVGAAKRLFQGAKKAEPPDPRDRPRHKH
Ga0306923_113967402	3300031910	Soil	MSDTLQMWLDSGALYLALAAIICVVFGVGAVRRLFHEANKFKIPQRGKERKRITDQ
Ga0306923_118056591	3300031910	Soil	AQAIAMSDTLQALLDSGALYLALGAIICVVLGAGAARRLFRGASKFDTPERKD
Ga0306923_125049801	3300031910	Soil	LSERIMSETLQVLLDSGALYLVFGAVICIVLGIGAVWRLLKDANKLKNPE
Ga0310916_106269271	3300031942	Soil	MWLDSGALYLALAAIICVVFGVGAVRRLFHEANKFKIPQRGKERKRITDQ
Ga0310913_108277211	3300031945	Soil	RKRLQMSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHKH
Ga0310910_104803391	3300031946	Soil	RQAQAIAMNDTLQALLDSGALYLALGALICIVLGAGAARRLFRGASKFDGPERKD
Ga0310910_114891232	3300031946	Soil	MSDTLQVLLDSGALYLVFGALICIVLGIGAIWRLFKGANKIKNPE
Ga0310909_114490631	3300031947	Soil	RSLGRRPIEPGPGERQRPRRKRLQMSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHKH
Ga0306926_110941973	3300031954	Soil	MSDALQALLDSGVLYFTLGALICIVLGAGAARRLFQGASKIKTPPH
Ga0318531_103825802	3300031981	Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGALKRLFQGAKKAEPPDQPHRPRHKH
Ga0318507_105483893	3300032025	Soil	MNDTLQALLDSGALYLALGALICIVLGAGAARRLFRGASKFD
Ga0318558_106480242	3300032044	Soil	MSDTLQVLLDSGALYLVFGALICIVLGIGAIWRLFKGANKTKNPE
Ga0318533_100404242	3300032059	Soil	MNDTVQALLDSGALYLALGALICIVLGAGAARRLFRGASKFDGPERKD
Ga0306924_107023912	3300032076	Soil	MSDTLQMWLDSGALYLALAAIICVVFGVGAVRRLFHEANKFKIPQRGKEHKRITDQ
Ga0318525_106691061	3300032089	Soil	ERQRPRRKRLQMSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHKH
Ga0318577_106332492	3300032091	Soil	QRPRRKRLQMSDAFQIMLDSGWLYFAAGAVICVILGVGAIKRLFQGAKKAEPPDPQHRPKHKH
Ga0311301_107853782	3300032160	Peatlands Soil	MSDAFGAMLDSGVLYLAVGAVICVFLGVGAARRLFQGAKKAEPPDPHDPPQHKH
Ga0306920_1002417413	3300032261	Soil	MSDALQALLDSGVLYFALGALVCIVLGVGAAQRLFQGASKIKTPPHSRSNRRQRHRG
Ga0306920_1014913143	3300032261	Soil	MSDTLQVLLDSGALYLVFGALICIVLGIGAVWRLFKDANKIKNPE
Ga0335081_101232441	3300032892	Soil	MSDAFQIMLDSGWLYFAAGAVICVILGVGALKRLFQGAKKAEPPDPPHRPRHKH
Ga0335069_124724652	3300032893	Soil	MTNAFGVLLDSGVLWLGIGAVICLLLGVGAVRRLFEGAAKAEPPDPSERRHRH
Ga0326723_0443489_84_248	3300034090	Peat Soil	MAQAFQVLLDSGGLYLALGAVLCIVIGAGAAKRLFQGAKRAEPPDPHRRAPRKD
Ga0364937_132752_106_261	3300034113	Sediment	MDMNDALQALLDSGGLYLALGAVLCIVLGVGAARRMFQGAKKIETPRRRKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041347

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences