Metagenome / Metatranscriptome Family F041332

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041332
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	51 residues
Representative Sequence	MNHAQKYLAQANRHIAELAVQIARQRVIVKHALNTGQRSEMAESLLDALEGSL
Number of Associated Samples	108
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.65 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	96.25 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.750 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.375 % of family members)
Environment Ontology (ENVO)	Unclassified (51.875 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00072	Response_reg	4.38
PF01381	HTH_3	1.88
PF08734	GYD	1.88
PF07690	MFS_1	1.25
PF13458	Peripla_BP_6	1.25
PF06267	DUF1028	0.62
PF05721	PhyH	0.62
PF13493	DUF4118	0.62
PF01116	F_bP_aldolase	0.62
PF14534	DUF4440	0.62
PF06411	HdeA	0.62
PF01527	HTH_Tnp_1	0.62
PF00196	GerE	0.62
PF04392	ABC_sub_bind	0.62
PF00081	Sod_Fe_N	0.62
PF13676	TIR_2	0.62
PF13467	RHH_4	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.88
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	0.62
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.62
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.62
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	0.62
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.75 %
Unclassified	root	N/A	26.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.75 %
Unclassified	root	N/A	26.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.75 %
Unclassified	root	N/A	26.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.75 %
Unclassified	root	N/A	26.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.75 %
Unclassified	root	N/A	26.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.75 %
Unclassified	root	N/A	26.25 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.12 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.12 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.75 %
Unclassified	root	N/A	26.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.62 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.75 %
Unclassified	root	N/A	26.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.62 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.75 %
Unclassified	root	N/A	26.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
unclassified Pseudorhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes	0.62 %
Magnetospirillum moscoviense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum moscoviense	0.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.75 %
Unclassified	root	N/A	26.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Pseudorhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	0.62 %
Magnetospirillum moscoviense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum moscoviense	0.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10148372	Not Available	564	Open in IMG/M
3300000955\|JGI1027J12803_103415857	Not Available	502	Open in IMG/M
3300000956\|JGI10216J12902_103158966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300000956\|JGI10216J12902_103713845	Not Available	590	Open in IMG/M
3300004479\|Ga0062595_100236620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1170	Open in IMG/M
3300004479\|Ga0062595_100963946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300004633\|Ga0066395_10036425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2090	Open in IMG/M
3300005165\|Ga0066869_10142453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005178\|Ga0066688_10687631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300005332\|Ga0066388_101704349	Not Available	1115	Open in IMG/M
3300005332\|Ga0066388_103528902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300005332\|Ga0066388_104268629	Not Available	728	Open in IMG/M
3300005468\|Ga0070707_101963711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005518\|Ga0070699_101437285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300005518\|Ga0070699_101642825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300005555\|Ga0066692_10699526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300005713\|Ga0066905_100287805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300005713\|Ga0066905_102101055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005764\|Ga0066903_100510773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2041	Open in IMG/M
3300005764\|Ga0066903_104960741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300005764\|Ga0066903_108387071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	528	Open in IMG/M
3300006175\|Ga0070712_102000513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300006854\|Ga0075425_100314717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1802	Open in IMG/M
3300006953\|Ga0074063_13537272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300009176\|Ga0105242_13193988	Not Available	509	Open in IMG/M
3300009792\|Ga0126374_10852338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300009792\|Ga0126374_11468411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300010043\|Ga0126380_10087587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1827	Open in IMG/M
3300010043\|Ga0126380_10390646	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300010046\|Ga0126384_11250770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300010047\|Ga0126382_11193475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300010047\|Ga0126382_11669679	Not Available	594	Open in IMG/M
3300010047\|Ga0126382_12223359	Not Available	528	Open in IMG/M
3300010048\|Ga0126373_12402078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300010361\|Ga0126378_11452606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300010361\|Ga0126378_12077443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300010362\|Ga0126377_11602657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300010366\|Ga0126379_10989530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300010366\|Ga0126379_12565329	Not Available	608	Open in IMG/M
3300010376\|Ga0126381_101737890	Not Available	901	Open in IMG/M
3300010376\|Ga0126381_104818875	Not Available	519	Open in IMG/M
3300010398\|Ga0126383_10421061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1378	Open in IMG/M
3300010398\|Ga0126383_11853966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300010398\|Ga0126383_12654688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300010868\|Ga0124844_1053089	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300010868\|Ga0124844_1151700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300012096\|Ga0137389_11325127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300012189\|Ga0137388_11641142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012200\|Ga0137382_10568589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300012207\|Ga0137381_11296868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300012208\|Ga0137376_10707391	Not Available	869	Open in IMG/M
3300012211\|Ga0137377_10222449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1813	Open in IMG/M
3300012211\|Ga0137377_10371342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1368	Open in IMG/M
3300012356\|Ga0137371_10433994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300012357\|Ga0137384_10368743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1188	Open in IMG/M
3300012582\|Ga0137358_10153100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1570	Open in IMG/M
3300012915\|Ga0157302_10456556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	541	Open in IMG/M
3300012923\|Ga0137359_11533338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300012930\|Ga0137407_12214731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300012948\|Ga0126375_10707395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300012948\|Ga0126375_12058041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012948\|Ga0126375_12114334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300012951\|Ga0164300_10122485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300016270\|Ga0182036_10203663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1452	Open in IMG/M
3300016294\|Ga0182041_10575439	Not Available	986	Open in IMG/M
3300016294\|Ga0182041_12271412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300016341\|Ga0182035_10218414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1520	Open in IMG/M
3300016357\|Ga0182032_10526772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300016357\|Ga0182032_10600694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	915	Open in IMG/M
3300016357\|Ga0182032_11215970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300016387\|Ga0182040_11949359	Not Available	504	Open in IMG/M
3300016404\|Ga0182037_10486001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300016404\|Ga0182037_10595174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300016422\|Ga0182039_10773552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300016422\|Ga0182039_10849639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300016422\|Ga0182039_12089198	Not Available	522	Open in IMG/M
3300016445\|Ga0182038_10250325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1424	Open in IMG/M
3300016445\|Ga0182038_10626569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300016445\|Ga0182038_10886257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300018433\|Ga0066667_10824274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300020581\|Ga0210399_11200073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300020583\|Ga0210401_11053518	Not Available	672	Open in IMG/M
3300021432\|Ga0210384_10839656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300021560\|Ga0126371_10810878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300025910\|Ga0207684_10726686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300025929\|Ga0207664_11757482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300026334\|Ga0209377_1114122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1097	Open in IMG/M
3300027527\|Ga0209684_1051242	Not Available	637	Open in IMG/M
3300027654\|Ga0209799_1067247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300027874\|Ga0209465_10452161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300027874\|Ga0209465_10666876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300028878\|Ga0307278_10203749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300031546\|Ga0318538_10195623	Not Available	1079	Open in IMG/M
3300031561\|Ga0318528_10140369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1284	Open in IMG/M
3300031561\|Ga0318528_10222432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300031679\|Ga0318561_10360930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300031680\|Ga0318574_10319304	Not Available	903	Open in IMG/M
3300031681\|Ga0318572_10439258	Not Available	776	Open in IMG/M
3300031681\|Ga0318572_10562527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300031681\|Ga0318572_10964843	Not Available	506	Open in IMG/M
3300031719\|Ga0306917_10239335	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300031719\|Ga0306917_10281052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300031736\|Ga0318501_10682044	Not Available	566	Open in IMG/M
3300031736\|Ga0318501_10858631	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031744\|Ga0306918_10405556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300031744\|Ga0306918_10861693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300031744\|Ga0306918_11128994	Not Available	606	Open in IMG/M
3300031748\|Ga0318492_10236041	Not Available	942	Open in IMG/M
3300031748\|Ga0318492_10510393	Not Available	638	Open in IMG/M
3300031763\|Ga0318537_10175961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300031763\|Ga0318537_10190447	Not Available	763	Open in IMG/M
3300031763\|Ga0318537_10386664	Not Available	516	Open in IMG/M
3300031765\|Ga0318554_10810497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300031768\|Ga0318509_10405603	Not Available	762	Open in IMG/M
3300031770\|Ga0318521_10620023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300031771\|Ga0318546_10392202	Not Available	969	Open in IMG/M
3300031779\|Ga0318566_10545401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031780\|Ga0318508_1064791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300031792\|Ga0318529_10057565	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300031794\|Ga0318503_10017495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1985	Open in IMG/M
3300031795\|Ga0318557_10093505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300031795\|Ga0318557_10447184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300031796\|Ga0318576_10318500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300031796\|Ga0318576_10607589	Not Available	515	Open in IMG/M
3300031799\|Ga0318565_10594028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300031819\|Ga0318568_10910775	Not Available	544	Open in IMG/M
3300031821\|Ga0318567_10367385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300031832\|Ga0318499_10081439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1240	Open in IMG/M
3300031846\|Ga0318512_10119332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300031879\|Ga0306919_10282613	Not Available	1255	Open in IMG/M
3300031890\|Ga0306925_11348393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300031894\|Ga0318522_10077920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1207	Open in IMG/M
3300031894\|Ga0318522_10086063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152	Open in IMG/M
3300031910\|Ga0306923_10095662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3347	Open in IMG/M
3300031910\|Ga0306923_12347566	Not Available	530	Open in IMG/M
3300031942\|Ga0310916_10203479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1657	Open in IMG/M
3300031945\|Ga0310913_10241902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300031945\|Ga0310913_11069235	Not Available	564	Open in IMG/M
3300031981\|Ga0318531_10004201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4967	Open in IMG/M
3300031981\|Ga0318531_10243054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300032039\|Ga0318559_10368701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300032051\|Ga0318532_10226151	Not Available	664	Open in IMG/M
3300032059\|Ga0318533_10243190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300032059\|Ga0318533_11285453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300032059\|Ga0318533_11452054	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300032060\|Ga0318505_10162168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum moscoviense	1039	Open in IMG/M
3300032064\|Ga0318510_10107056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300032065\|Ga0318513_10501241	Not Available	594	Open in IMG/M
3300032068\|Ga0318553_10489606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300032076\|Ga0306924_10578623	Not Available	1272	Open in IMG/M
3300032076\|Ga0306924_10740707	Not Available	1100	Open in IMG/M
3300032076\|Ga0306924_12075595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300032076\|Ga0306924_12236145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300032090\|Ga0318518_10626677	Not Available	548	Open in IMG/M
3300032094\|Ga0318540_10490163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300032261\|Ga0306920_101758759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300032261\|Ga0306920_102647998	Not Available	686	Open in IMG/M
3300033289\|Ga0310914_11398474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.75%
Host-Associated	Host-Associated	1.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.75%
Plants	Host-Associated → Plants	1.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.62%
Loam	Environmental → Terrestrial → Soil → Loam	13.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.25%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101483721	3300000597	Forest Soil	MNPAQEQKHLAQANGHIADLKVQIVRQRVMVKYTLDTGQPSEMAESMLHALE
JGI1027J12803_1034158572	3300000955	Soil	MNHAQKYLAQANRQIAELAVQIACQRVIVKRALDTGQRSEVADSLLDALEGSLRIFERH
JGI10216J12902_1031589661	3300000956	Soil	MKHHQKYLAQANRHIAELAVQIRRQRVVVKHALATGQRLEMAESLLD
JGI10216J12902_1037138452	3300000956	Soil	MNPAQEQKHLAQANGHIADLKVQIVRQRVMVKYTLDTGQPSEMAESMLHALEES
Ga0062595_1002366203	3300004479	Soil	MNRVQKQEHLAQANRHIAELAVQILRQRGIVKHALDTGQRSEMAESLLDA
Ga0062595_1009639462	3300004479	Soil	VKVKLPARVACKSMNHAQKYLSQANRQIAELTVQHARQRVIVKHALDTGQGSEMAESLLDALEGSLR
Ga0066395_100364251	3300004633	Tropical Forest Soil	MNHAEKYLAQANQHIAELTVQIARQRVIVKDAFDRGQRSEMAESLLDALEGSLRIFEKH
Ga0066869_101424531	3300005165	Soil	MNRAQEQKHHLALANRQIAELTVQIVRQRVIVKHALDTGQRSEMAESLLDALEGSLR
Ga0066688_106876312	3300005178	Soil	MNRAQEQKHHLALANRQIAELAVQIASQRVIVRHALDTGQRSEMAESLLD
Ga0066388_1017043491	3300005332	Tropical Forest Soil	MDRAQEQKHLAEANRHIAELTVQIAHQRAIVKDAFDTGQRSEMAE
Ga0066388_1035289024	3300005332	Tropical Forest Soil	MNYAQKYLAQANRQIAELTVQIAHQRAIVKHTLDTGQGSEMAESLLDALE
Ga0066388_1042686291	3300005332	Tropical Forest Soil	MNHAQKYLAQANRQIAELMVQLARQRVVVRRALDTGQRREMAESCLMRS
Ga0070707_1019637111	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNHAQKYLSQANRQIAELTVQLARQRVIVRHALDTGQGSEMAESLLDALEGSLRIFEKHR
Ga0070699_1014372852	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNHAQKYLAQANRHIAELNVQIARQRAIVTHALDTGQRSEIAESLLDALEGSLRIFEK
Ga0070699_1016428252	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNHAQKYLAQANRQIAELAVQVASQRVIVKHALDTGQRSEMAESLLDALEGSL
Ga0066692_106995262	3300005555	Soil	MNRVQKQEHLAQANRHIAELAVQILRQRGIVKHALDTGQRSEMAESLLDALEGSLRI
Ga0066905_1002878052	3300005713	Tropical Forest Soil	LVAKGVVAQANRHITELMVQIAHQRAIVKDALDTGQHSEMAESLLDALEGSLRIFEK
Ga0066905_1021010551	3300005713	Tropical Forest Soil	MNHAQKYLAQANRQIAELTVQIAHQRAIVKDALDTGQHSEMAESLLDALEGSLRIFEK
Ga0066903_1005107731	3300005764	Tropical Forest Soil	MSRAQEHLAQANRHIAELTVQIIRQRVIIKYALDTGQRSEMAESLLDALEGSLRLFERH
Ga0066903_1049607412	3300005764	Tropical Forest Soil	MNHAQKYLAQANRQIAELAVQIASQRAIVKHALDTGQRSEMAESLLDALEGS
Ga0066903_1083870712	3300005764	Tropical Forest Soil	MNHAQKYLAQANRQIAELYVQIAPRVVVKHALDTGQRLEMAESLLDALEGSLR
Ga0070712_1020005131	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNHAQKYLAQAIRQIAELTVQIARQRVVVKHALDTGQGSEMAESLL
Ga0075425_1003147171	3300006854	Populus Rhizosphere	MNRVQKQEHLAQANRHIAELAVQILRQRGIVKHALDTGQRSEMAESLLD
Ga0074063_135372723	3300006953	Soil	MSHAQKYLAQANRHIAELKVQIVRQRVIVKDALDAGQRSEMAESLLDALEG
Ga0105242_131939881	3300009176	Miscanthus Rhizosphere	MNRAREQKHHLALANRQIAELTVQIVRQRVSVKHARDTGQRSEMSESL
Ga0126374_108523381	3300009792	Tropical Forest Soil	MNHAQKYLAQADRHIAELTVQIAHQRAIVKDALDTGQRSEMAESLLDALEG
Ga0126374_114684111	3300009792	Tropical Forest Soil	MNQQKHLAEANRHIAELTVQIIRQRVIVKDALDTGQQSEMAESLLYALEES
Ga0126380_100875871	3300010043	Tropical Forest Soil	MNDAQKYLAQANRQIAELAVQIATQRVIVKHALDTSQRSEAAE
Ga0126380_103906461	3300010043	Tropical Forest Soil	MNHAQKYLAQANRQIAELAVQIATQRVIVKHALDTGQGSELA
Ga0126384_112507701	3300010046	Tropical Forest Soil	MNHAQKYLAQANRQIAELAVQLARQRVIVKHALDTGQHSEMAESLLNALEG
Ga0126382_111934752	3300010047	Tropical Forest Soil	MNRAQEQRHLAQANGHIAELKVQIVRQRAIVKYALDTGQQSEMAESMLLALEDSL
Ga0126382_116696791	3300010047	Tropical Forest Soil	MNHAQKYLAQANRHIAELSVQIAHQRAIIKDALAMGQRSAMAESLLDALE
Ga0126382_122233592	3300010047	Tropical Forest Soil	MKHAQKYLAQANRQIAELAVQIARQRVIVRDALDTGQRSEMAES
Ga0126373_124020781	3300010048	Tropical Forest Soil	MNHAQKYLAQANRQIAELAVQIATQRVIVKHALDRGQRSEMAESLLDALEGSLR
Ga0126378_114526061	3300010361	Tropical Forest Soil	MNHDQKYLAQANRHIAELTVQIARQRAIVKDALDTGQRSEMAESLLDALEGSLRIF
Ga0126378_120774431	3300010361	Tropical Forest Soil	MNHVQEYLAQANRQIAELTVQIVRQRVFVKYALDSGQRSEMAESLLDALEGSLRIFERH
Ga0126377_116026572	3300010362	Tropical Forest Soil	MNHAQKYLAQANRHIAELTVQLARQRVIVRHALDAGQGSEMAESLLDALEGSLRIF
Ga0126379_109895302	3300010366	Tropical Forest Soil	MNHAEKYLAQANQHIAELTVQIARQRVIVKDAFDRGQRSEMAESLLDALEGSLRIFE
Ga0126379_125653291	3300010366	Tropical Forest Soil	MNHAQKYLAQANRQIAELTVQIVRQRVIVKNALDTGQPSEL
Ga0126381_1017378902	3300010376	Tropical Forest Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRSEMAESLLDALEG
Ga0126381_1048188752	3300010376	Tropical Forest Soil	MSHAQKYLAQANRHIAELKVQIVRQRVIVKDALDAGQRSEMAESLLD
Ga0126383_104210611	3300010398	Tropical Forest Soil	MNRVQKQKHLAQANRHIAELAVQLARQRVIVKQALATGQRSEMAESLLDALEG
Ga0126383_118539662	3300010398	Tropical Forest Soil	MNHAQKYLAQANRHIAELTVQAARQRVMVKDALDAGQRSEMAESLLDALEGSLRIF
Ga0126383_126546881	3300010398	Tropical Forest Soil	MNHARKYLAQANRQIAELAVQIAAQRVIVRHALDTGQRSEMAESLLDALEGSLRIFE
Ga0124844_10530891	3300010868	Tropical Forest Soil	QKYLAQANRHIAELVVQIAHQRAIIKALETGQGSEMAESLLDGGVAA*
Ga0124844_11517003	3300010868	Tropical Forest Soil	MNHAEKYLAQANQHIAELTVQIARQRVIVKNAFDSGQRSEMAESLLDALEGS
Ga0137389_113251271	3300012096	Vadose Zone Soil	MNHAQKYLSQANRQIAELTVQHARQRLIVKHALDTGQGSEMAESLLDALEGSLRIFE
Ga0137388_116411421	3300012189	Vadose Zone Soil	MNHAQKYLSQANRQIAELTVQLARQRVIVRHALDTGQRAEMAESLLDA
Ga0137382_105685892	3300012200	Vadose Zone Soil	MNRVQERKHHLALANRQIAELTVQIVRQRVSVKHARDTGQRSEMSESLLDALEGS
Ga0137381_112968681	3300012207	Vadose Zone Soil	MNRVQKQEHLAQANRHIAELAVQILRQRGIVKHALDTGQRSEMAESLLDALEGSLRIFEK
Ga0137376_107073911	3300012208	Vadose Zone Soil	MNHAQKYLSQANRQIAELTVQHARQRVIVKHALDTGQGSEMAE
Ga0137377_102224494	3300012211	Vadose Zone Soil	MNRVQKQEHLAQANRHIAELAVQILRQRGIVKHALDTGQRSEMAESLL
Ga0137377_103713421	3300012211	Vadose Zone Soil	MNHAQKYLSQANRQIAELTVQLARHRVIVKHALDTGQGSEMAESLLDALEGS
Ga0137371_104339941	3300012356	Vadose Zone Soil	MNRVQKQEHLAQANRHIAELAVQILRQRGIVKHALDTGQRSEMAESLLDALEGSLR
Ga0137384_103687431	3300012357	Vadose Zone Soil	MNRAQEQKHHLALANRQIAELTVQIVRQRVIVKHALDTGQRSEMAESLLDALEGSLRI
Ga0137358_101531002	3300012582	Vadose Zone Soil	MNHARKYLAQANRHIAELTVQIVRQRVIVKHALDTGQRSELAESLLDAL
Ga0157302_104565562	3300012915	Soil	MNHAQKYLAQANRHIAELTVQIVRQRVIVKHALDTGQRSE
Ga0137359_115333381	3300012923	Vadose Zone Soil	MSHAQKYLAQANRHIAELKVQMVRQRVIVKDALDTGQRSEMAESLLDALEGSLRIFEKH
Ga0137407_122147311	3300012930	Vadose Zone Soil	MSRAQEHLAQANGHIAELKVRIVRQRVIVKYALDTGQRSEMAESLLDALEGSLR
Ga0126375_107073952	3300012948	Tropical Forest Soil	MKHAQEHLAQANRHIAELMVQIVRQRVIVKYALDTGQRSAMAESLLDA
Ga0126375_120580412	3300012948	Tropical Forest Soil	MNHAQKYLAQANRQIAELVVQIAAQRVIVQDAFDTGQRSEMAESLLDALEG
Ga0126375_121143342	3300012948	Tropical Forest Soil	MNQQKHLAEANRHIAELTVQIIRQRVIVKDALDTGQQSEMAESLLYALEESLAALRPAHAS*
Ga0164300_101224851	3300012951	Soil	MSHAQKYLAQANRHIAELKVQIVRQRVIVKDALDAGQRSEMAESLLDALEGSLRIF
Ga0164305_122127792	3300012989	Soil	MELTGRAACKSMSRAQEHLAQANGHIAELKVRIVRQRVIVKYALDTGQRSEMAESLLDALEGSLR
Ga0182036_102036631	3300016270	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKDAFDTGQRSEM
Ga0182041_105754391	3300016294	Soil	MNHAQKYLAQANRQIAELTVQIARQRVIVKDALDTGQRSEMAES
Ga0182041_122714121	3300016294	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKHALNTGQRSEMAESLLD
Ga0182035_102184143	3300016341	Soil	MNHAQMYLAQANRHIAELKVQIVRQRVIVKDALETGQRLEMAESLLDALEGSVRIFE
Ga0182032_105267721	3300016357	Soil	MNHAQKYLAQANRHIAELTVQIACQRGVVKHALDTGQRLEMAESLLDALEGSVRIFE
Ga0182032_106006943	3300016357	Soil	MNHAQKYLAQANRHIAELTVQIARQRVIVKNAFDTGQRSEMAESRLDAL
Ga0182032_112159701	3300016357	Soil	MNHAQMYLAQANRHIAELKVQIVRQRVIVKDALETGQRLEMAESLLDALEGSVRIFEKY
Ga0182040_119493592	3300016387	Soil	MSHAQKYLAQANRHIAELKVQIVSQRVIVKDALGTDQR
Ga0182037_104860011	3300016404	Soil	MNHAQKYLAQANRQIAELVVQIAHQRVIVRHALDTGQGSEMAKSLLDALEASLRIF
Ga0182037_105951741	3300016404	Soil	MSRAQEHLAQANGYIAELKVQIVRQRVIIKDALDTGERSEMAESLLDALEGSL
Ga0182039_107735521	3300016422	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKDAFDTGQRSEMAESLLDALEGSLRIFEKH
Ga0182039_108496392	3300016422	Soil	MNHAQKYLAQANRHIAELTVQIAHQRAIVKDALYTGQRSEMAESLLDALEGSLRVF
Ga0182039_120891981	3300016422	Soil	MSRAQEHVAQANRYIAELTVEIIRQRVIVKYALDTGQSSELSESLLHALE
Ga0182038_102503252	3300016445	Soil	MKHAQEHLAQANRHIAELMVQIVRQRAIVKYALDTGQRSAMAESLLDALERSLRIF
Ga0182038_106265693	3300016445	Soil	MNHAQKYLAQANRQIAELAVQIARQRVIVKHALNTGQRSEMAESLLD
Ga0182038_108862572	3300016445	Soil	MNRAQEHLVQANGHIAELKVQIVRQRVIVKYALDTGQRSEMAESLLNALEGSLCIF
Ga0066667_108242742	3300018433	Grasslands Soil	MNRVQKQEHLAQANRQIAELAVQILRQRGIAKHALDTGQRSE
Ga0210399_112000731	3300020581	Soil	MSHAQKYLAQANRHIAELKVQIVRQRVIVKDALDAGQRSEMAESLLDAVEGSLRIFE
Ga0210401_110535181	3300020583	Soil	MSYAQKYLAQANRHIAELKVQMVRQRVIVKDALDTGQRSEM
Ga0210384_108396562	3300021432	Soil	MSHAQKYLAQANRHIAELKVQMVRQRVIVKDALDTGQRSEMAES
Ga0126371_108108783	3300021560	Tropical Forest Soil	MNHAQKYLARANRHIAELVVQIAHQRAIIKALETGQGSEMAESLLDALEASLRIFEKHRV
Ga0207684_107266862	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNHAQKYLAQANRQIAELTVQHARQRVIVKHALDTGQGSEMAESLLDALEGSLRIFE
Ga0207664_117574821	3300025929	Agricultural Soil	CSEVSSQANRQIAELTVQHARQRVIVKHALDTGQGSEMAESLLDALEGSLRIF
Ga0209377_11141222	3300026334	Soil	MNRVQKQEHLAQANRHIAELAVQILRQRGIVKHALDTGQRSEMAESLLDALEGSLRILEK
Ga0209684_10512421	3300027527	Tropical Forest Soil	MKRHLAQANGHIVDLKVQIARQRVLIKYARDTGQRSEMAESMLDALEES
Ga0209799_10672471	3300027654	Tropical Forest Soil	MNHAQKYLAQANRHIAELAVQIAAQRAIVKHALDTGQRSEMADSLLDAL
Ga0209465_104521612	3300027874	Tropical Forest Soil	MNHVQKYLAQANRQIAELTVQIARQRVIVKDALDTGQRSEMAESLLDA
Ga0209465_106668762	3300027874	Tropical Forest Soil	MNHAQKYLVQANRQIAELAVQFARQRVIVKHALDTGQRSEMAESLLDALEGSL
Ga0307278_102037493	3300028878	Soil	MNRVQKQKHLAQANRHIAELAVQILRQRVIVKHALDTGQRSEMAESLLDALEGSLRISSR
Ga0318538_101956231	3300031546	Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRPETAESLLDALEGSLR
Ga0318528_101403691	3300031561	Soil	MNHAQKYLAQANRHIAELTVQIARQRVIVKNAFDTGQR
Ga0318528_102224323	3300031561	Soil	VQIQSMNHAQKYLAQANRHIAELTVQIAHQRAIVKDALDTGKHSEMAESLLDALEGSLRIFEK
Ga0318561_103609301	3300031679	Soil	MNHAQKYLAQANRQIAELAVQIARQRVIVKHALNTGQRSEMAESLLDAL
Ga0318574_103193042	3300031680	Soil	MNHAQKYLAQANRQIAELTVQIARQRVIVKDAFDSGQRSEMAESLL
Ga0318572_104392581	3300031681	Soil	MNHAQKYLAQANRQIAELTVQIARQRVIVKDALDT
Ga0318572_105625272	3300031681	Soil	MNHAQKYLAQANRHIAELTVQIAHQRAIVKDALYTGQRSEMAESLVDALEGSLR
Ga0318572_109648432	3300031681	Soil	MNDAQKYLAQANRQIAELAVQIAAQRAIIKHALYTGQRPEMADSLLDALEGSLRIFEK
Ga0306917_102393351	3300031719	Soil	MNRAQEHLAQANGHIAELTVQIVRQRVTVKYALDTGQRSEIVESLLDALEGSLR
Ga0306917_102810523	3300031719	Soil	MNHAQKYLAQANRQIAELTVQIARQRVIVKHALDTGQHSEMAESLLDALEGSLRIFE
Ga0318501_106820441	3300031736	Soil	MSRAQEHVAQANRYIAELTVEIIRQRVIVKYALDTGQSSELSESLLHTLEES
Ga0318501_108586312	3300031736	Soil	MSHAQKYLAQANRHIAELKVQMVRQRVIVKDALGTGQRSEMAESLLDALEGSLRIHS
Ga0306918_104055562	3300031744	Soil	MNHAQMYLAQANRHIAELKVQIVRQRVIVKDALETGQRLY
Ga0306918_108616932	3300031744	Soil	MNRVQEHLAQANGHLAELTVQIVRQRVIVKYALDTDQRSEMAESLVHAL
Ga0306918_111289942	3300031744	Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRSEMAESLLDALE
Ga0318492_102360413	3300031748	Soil	MNHAQKYLAQANRQIAELTVQIVRQRVIVKNALDTGQPSELSESLLHAL
Ga0318492_105103931	3300031748	Soil	MSHAQKYLERANRHIAELKVQIVRQRVIVKDALDTGECSEIAESL
Ga0318537_101759611	3300031763	Soil	MNHAQKYLAQANRHIAELTVQIARQRVIVKDALDTCQRSEMAESLLDAL
Ga0318537_101904471	3300031763	Soil	MNHAQKYLAQANRQIAELTVQIVRQRVIVKNALDTGQPSELSESLLHALEESLG
Ga0318537_103866642	3300031763	Soil	MNHAQKYLAQANRQIAELTVQIARQRVIVKDAFDSGQRSE
Ga0318554_108104971	3300031765	Soil	MNHVQKYLAQANRHISELVVQIAHQRAIAKHALDTGQRSEMAESL
Ga0318509_104056031	3300031768	Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRSEMAESL
Ga0318521_106200231	3300031770	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKHALNTGQRSEMAESLLDALEGSLRTF
Ga0318546_103922022	3300031771	Soil	MNRVQEHLAQANGHLAELAVQIARQRVIVKQALDTGQRS
Ga0318566_105454011	3300031779	Soil	VQIQSMNHAQKYLAQANRHIAELTVQIAHQRAIVKDALDTGKHSEMAESLLDALEGSLRI
Ga0318508_10647912	3300031780	Soil	MNHAQKYLAQANRQIAELTVQIARQRVIVKDAFDSGQRSEMAESLLDALEGSLR
Ga0318529_100575651	3300031792	Soil	MNHAQKYLAQANRHIAELTVQIARQRVIVKDAFDTGQRSEMAESLLDALEGSLRIFEK
Ga0318503_100174951	3300031794	Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRPETAESLLDALEGSLRIF
Ga0318557_100935053	3300031795	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKDAFDTGQRSEMAESLLDALEGSLRIFEK
Ga0318557_104471841	3300031795	Soil	MSHAQKYLAQANRHIAELKVQMVRQRVIVKDALGTGQRSEMAESLLDALEGSLR
Ga0318576_103185001	3300031796	Soil	MNHAQKYLAQANRQIAELTVQIARQRVIVKDALDTGQRSEMAESLL
Ga0318576_106075891	3300031796	Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRPETVESL
Ga0318565_105940281	3300031799	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKDAFDTGQRSE
Ga0318568_109107751	3300031819	Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRSEMAESLLDALEGS
Ga0318567_103673852	3300031821	Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRSEMAESLLDALEGSLRI
Ga0318499_100814391	3300031832	Soil	MSHAQKYLAQANRHIAELNVQIGRQRVSVKDAFDTGQRLEMAESLLDALEGSLRIFEK
Ga0318517_103715912	3300031835	Soil	MIRSHLAEANRHIAELTVQIARQRVIVKYVLDTGQPSGLSESLIHALEES
Ga0318512_101193321	3300031846	Soil	MNHAQKYLAQANRHIAELTVQIARQRVIVKHAFDTGQRSEM
Ga0306919_102826131	3300031879	Soil	MNRVQEHLAQANGQLAQLTVQIVRQRIIVKYAVDTNQPSEMAESLLHALEQSLRAFE
Ga0306925_113483931	3300031890	Soil	MNRVQEQKHLAQANGHIAELKVQIVRQRAIVKYALDTGQPSEMAESLLHALEVSLG
Ga0318522_100779201	3300031894	Soil	MNHVQKYLAQANRQIAELTVQIARQRVIVKDALDTGQRSEMAESL
Ga0318522_100860631	3300031894	Soil	MNHAQKYLAQANRHIAELTVQIARQRVIVKDALDTCQR
Ga0306923_100956627	3300031910	Soil	MNHAQKKYLSQANRQIAELTVQHARQRVIVKHALDTGQGSEMAESL
Ga0306923_123475662	3300031910	Soil	LAHLAQANRQIAEFAVQLARQRVIVKRALDTGQRSE
Ga0310916_102034795	3300031942	Soil	MNCAQEQKHLAQANGHIGELKVQIVRQRVIVKYVLDTGQPSEMAESMLNALEESLGA
Ga0310913_102419022	3300031945	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKHALNTGQRSEMAESLLDALEGSL
Ga0310913_110692351	3300031945	Soil	VQIQSMNHAQKYLAQANRHIAELTVQIAHQRAIVKDALDTGKHSEMAESLLD
Ga0318531_100042011	3300031981	Soil	MNHAQKYLAQANRQIAELTVQIAAQRVIVKQALDTGQRSEMAE
Ga0318531_102430543	3300031981	Soil	MNHAQKYLAQANRQIAELAVQIARQRVIVKDALDTGQRSEMAESLLD
Ga0318559_103687011	3300032039	Soil	MNHAQKYLAQANRQIAELAVQIARQRVIVKHALNTGQRSEMAESLLDALEGSL
Ga0318532_102261511	3300032051	Soil	MNHAQKYLAQANRQIAELMVQIARQRVIVKQALDTGRGSEMAESLLDALEG
Ga0318533_102431903	3300032059	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKDAFDTGQRSEMAESLLDALEGSLRIFEKHG
Ga0318533_112854532	3300032059	Soil	MSHAQKYLAQANRHIAELKVQMVRQRVIVKDALGTGQRSEMAESLLDALEGSLRIFEKH
Ga0318533_114520542	3300032059	Soil	LAHLAQTNRQIAELAVQIAAQRAIIKHALYTGQRSKMADSLLD
Ga0318505_101621681	3300032060	Soil	MNHAQKYLAQANRQIAELTVQIAAQRVIVKQALDTGQRSEM
Ga0318510_101070561	3300032064	Soil	MNRVQEHLAQANGHLAELAVQIARQRVIVKQALDTGQRSEMAES
Ga0318513_105012412	3300032065	Soil	MNHAQKYLAQANRQIAELTVQIARQRVIVKDALDTGQRSEMAESL
Ga0318553_104896062	3300032068	Soil	MNHAQKYLAQANRHIAELTVQIAHQRAIVKDALDTGQHSEMAKSLLDALEGSLR
Ga0306924_105786232	3300032076	Soil	MSRAQEHVAQANRYIAELTVEIIRQRVIVKYALDTGQSSELSESLLHALEESLG
Ga0306924_107407071	3300032076	Soil	MNRVQEHLAQANGHLAQLAVQIVRQRIIVKYAVDTDQPSEMAESLLHALEQSLAHSRSIA
Ga0306924_120755952	3300032076	Soil	MNRAQEHLAQANGHIAELTVQIVRQRVTVKYALDTGQRSEIVESLLDA
Ga0306924_122361451	3300032076	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKHALNTGQRSEMAESLLDALEGSLRTFERHR
Ga0318518_106266771	3300032090	Soil	MNHAQKYLAQANRHIAELTVHIARQRVIVKDALGTGQRPEMAESL
Ga0318540_104901631	3300032094	Soil	MNHAQKYLAQANRHIAELAVQIARQRVIVKDAFDTGQRSEMAESLLDALEGSLRIFEKHR
Ga0306920_1017587593	3300032261	Soil	MKRHLAQANGHIAELKVQIVRQRVIVKHARDTGQPSEIAESLLDALEGSLRI
Ga0306920_1026479982	3300032261	Soil	MNHAQKYLVQANQQIAELTVQAARQRVIVKDALDAGQRPEMAESLL
Ga0310914_113984741	3300033289	Soil	MSHAQKYLAQANRHIAELKVQMVRQRVIVKDALDTGQRSEMAESLLDALEGSLRIFE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041332

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences