Metagenome / Metatranscriptome Family F041116

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041116
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	49 residues
Representative Sequence	KLLAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS
Number of Associated Samples	113
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.12 %
% of genes near scaffold ends (potentially truncated)	95.00 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.125 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.750 % of family members)
Environment Ontology (ENVO)	Unclassified (71.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.67% β-sheet: 20.00% Coil/Unstructured: 57.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF02368	Big_2	20.00
PF00149	Metallophos	3.75
PF07995	GSDH	3.75
PF00535	Glycos_transf_2	3.12
PF16363	GDP_Man_Dehyd	2.50
PF00158	Sigma54_activat	1.88
PF14306	PUA_2	1.88
PF13480	Acetyltransf_6	1.88
PF04185	Phosphoesterase	1.88
PF01370	Epimerase	1.88
PF00501	AMP-binding	1.25
PF12850	Metallophos_2	1.25
PF00550	PP-binding	0.62
PF08242	Methyltransf_12	0.62
PF13671	AAA_33	0.62
PF00296	Bac_luciferase	0.62
PF01757	Acyl_transf_3	0.62
PF00593	TonB_dep_Rec	0.62
PF01070	FMN_dh	0.62
PF13193	AMP-binding_C	0.62
PF04892	VanZ	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	3.75
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.88
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.62
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.62
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.12 %
Unclassified	root	N/A	11.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.12 %
Unclassified	root	N/A	11.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.12 %
Unclassified	root	N/A	11.88 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	55.62 %
Unclassified	root	N/A	11.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.88 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	55.62 %
Unclassified	root	N/A	11.88 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.25 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.25 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	47.50 %
Unclassified	root	N/A	11.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.25 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.62 %
Unclassified	root	N/A	11.88 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.25 %
Gemmatimonadetes bacterium 13_1_20CM_4_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_4_66_11	1.25 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.25 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.62 %
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.62 %
Unclassified	root	N/A	11.88 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	1.25 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.25 %
Gemmatimonadetes bacterium 13_1_20CM_4_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_4_66_11	1.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.25 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.62 %
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.62 %
Unclassified	root	N/A	11.88 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.25 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	1.25 %
Gemmatimonadetes bacterium 13_1_20CM_4_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_4_66_11	1.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.25 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.62 %
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.62 %
Unclassified	root	N/A	11.88 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	1.25 %
Gemmatimonadetes bacterium 13_1_20CM_4_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_4_66_11	1.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.25 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.62 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.62 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.62 %
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.62 %
Unclassified	root	N/A	11.88 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	1.25 %
Gemmatimonadetes bacterium 13_1_20CM_4_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_4_66_11	1.25 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.25 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	0.62 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.62 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.62 %
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1080516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300002560\|JGI25383J37093_10014774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2589	Open in IMG/M
3300002560\|JGI25383J37093_10049048	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300002560\|JGI25383J37093_10140107	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300002561\|JGI25384J37096_10020404	All Organisms → cellular organisms → Bacteria	2581	Open in IMG/M
3300002561\|JGI25384J37096_10046892	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300002561\|JGI25384J37096_10114651	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	914	Open in IMG/M
3300002908\|JGI25382J43887_10038393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2601	Open in IMG/M
3300002908\|JGI25382J43887_10297393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	709	Open in IMG/M
3300002908\|JGI25382J43887_10337916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	642	Open in IMG/M
3300002908\|JGI25382J43887_10491604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_4_66_11	519	Open in IMG/M
3300002911\|JGI25390J43892_10012170	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2017	Open in IMG/M
3300002912\|JGI25386J43895_10186737	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	520	Open in IMG/M
3300005166\|Ga0066674_10004322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5447	Open in IMG/M
3300005172\|Ga0066683_10066413	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300005172\|Ga0066683_10150625	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1428	Open in IMG/M
3300005172\|Ga0066683_10295060	Not Available	1007	Open in IMG/M
3300005172\|Ga0066683_10843146	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300005176\|Ga0066679_10062644	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300005177\|Ga0066690_10409251	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300005179\|Ga0066684_10131230	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300005181\|Ga0066678_10194636	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	1292	Open in IMG/M
3300005181\|Ga0066678_10802008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	622	Open in IMG/M
3300005446\|Ga0066686_10103155	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300005446\|Ga0066686_10655434	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005447\|Ga0066689_10312295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	976	Open in IMG/M
3300005450\|Ga0066682_10465498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	802	Open in IMG/M
3300005467\|Ga0070706_101488070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300005471\|Ga0070698_101978391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	536	Open in IMG/M
3300005540\|Ga0066697_10770775	Not Available	523	Open in IMG/M
3300005552\|Ga0066701_10840521	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005553\|Ga0066695_10768262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300005554\|Ga0066661_10668382	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300005556\|Ga0066707_10055744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2307	Open in IMG/M
3300005556\|Ga0066707_10781817	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	591	Open in IMG/M
3300005557\|Ga0066704_10770433	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005558\|Ga0066698_10846358	Not Available	589	Open in IMG/M
3300005561\|Ga0066699_10294933	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300005574\|Ga0066694_10414069	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300006032\|Ga0066696_10588753	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300006046\|Ga0066652_100119996	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300006794\|Ga0066658_10045677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1859	Open in IMG/M
3300006796\|Ga0066665_10819201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	732	Open in IMG/M
3300006797\|Ga0066659_10395136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1086	Open in IMG/M
3300006797\|Ga0066659_10471173	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300006903\|Ga0075426_10027708	All Organisms → cellular organisms → Bacteria	4059	Open in IMG/M
3300007265\|Ga0099794_10147628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1193	Open in IMG/M
3300009012\|Ga0066710_100518448	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1799	Open in IMG/M
3300009012\|Ga0066710_100720223	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300009012\|Ga0066710_100896441	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300009012\|Ga0066710_101433453	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300009012\|Ga0066710_103059044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	649	Open in IMG/M
3300009090\|Ga0099827_11250540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300009137\|Ga0066709_101389380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1022	Open in IMG/M
3300010142\|Ga0127483_1273211	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300010301\|Ga0134070_10413557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	534	Open in IMG/M
3300010303\|Ga0134082_10247752	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300010304\|Ga0134088_10216977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	917	Open in IMG/M
3300010320\|Ga0134109_10008536	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2867	Open in IMG/M
3300010321\|Ga0134067_10059539	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1246	Open in IMG/M
3300010321\|Ga0134067_10337496	Not Available	590	Open in IMG/M
3300010323\|Ga0134086_10003772	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4393	Open in IMG/M
3300010325\|Ga0134064_10458274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300010335\|Ga0134063_10034676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2158	Open in IMG/M
3300010335\|Ga0134063_10146588	Not Available	1093	Open in IMG/M
3300010335\|Ga0134063_10153248	Not Available	1070	Open in IMG/M
3300010335\|Ga0134063_10364798	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010336\|Ga0134071_10134442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1196	Open in IMG/M
3300010336\|Ga0134071_10494814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
3300010336\|Ga0134071_10686099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300010337\|Ga0134062_10272587	Not Available	793	Open in IMG/M
3300010366\|Ga0126379_11788518	Not Available	719	Open in IMG/M
3300010396\|Ga0134126_10673976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1177	Open in IMG/M
3300011269\|Ga0137392_11142703	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300011405\|Ga0137340_1039353	Not Available	892	Open in IMG/M
3300012157\|Ga0137353_1092529	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300012166\|Ga0137350_1012296	Not Available	1542	Open in IMG/M
3300012189\|Ga0137388_10590486	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1032	Open in IMG/M
3300012189\|Ga0137388_10765336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	896	Open in IMG/M
3300012199\|Ga0137383_11068724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	586	Open in IMG/M
3300012200\|Ga0137382_10020197	All Organisms → cellular organisms → Bacteria	3808	Open in IMG/M
3300012202\|Ga0137363_10299358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1320	Open in IMG/M
3300012204\|Ga0137374_11212325	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300012206\|Ga0137380_11522511	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300012207\|Ga0137381_10855610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	787	Open in IMG/M
3300012211\|Ga0137377_11261056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300012349\|Ga0137387_10995334	Not Available	602	Open in IMG/M
3300012350\|Ga0137372_10490473	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	915	Open in IMG/M
3300012351\|Ga0137386_10001079	All Organisms → cellular organisms → Bacteria → Proteobacteria	16710	Open in IMG/M
3300012351\|Ga0137386_11015372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	589	Open in IMG/M
3300012357\|Ga0137384_10801551	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	762	Open in IMG/M
3300012362\|Ga0137361_10960064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	773	Open in IMG/M
3300012372\|Ga0134037_1045375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	605	Open in IMG/M
3300012917\|Ga0137395_10024649	All Organisms → cellular organisms → Bacteria	3554	Open in IMG/M
3300012917\|Ga0137395_10355058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1045	Open in IMG/M
3300012925\|Ga0137419_10052081	All Organisms → cellular organisms → Bacteria	2646	Open in IMG/M
3300012930\|Ga0137407_10053764	All Organisms → cellular organisms → Bacteria	3285	Open in IMG/M
3300012930\|Ga0137407_11347828	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012930\|Ga0137407_11969871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	557	Open in IMG/M
3300012975\|Ga0134110_10185147	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	869	Open in IMG/M
3300012975\|Ga0134110_10299354	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300014154\|Ga0134075_10330846	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	666	Open in IMG/M
3300014154\|Ga0134075_10358630	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	640	Open in IMG/M
3300014154\|Ga0134075_10379332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	622	Open in IMG/M
3300014157\|Ga0134078_10365324	Not Available	639	Open in IMG/M
3300014157\|Ga0134078_10432041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300014157\|Ga0134078_10668141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	506	Open in IMG/M
3300014166\|Ga0134079_10166160	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300015264\|Ga0137403_11307747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300015359\|Ga0134085_10482560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300015359\|Ga0134085_10576007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300017654\|Ga0134069_1116185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	879	Open in IMG/M
3300017656\|Ga0134112_10226847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_4_66_11	736	Open in IMG/M
3300017657\|Ga0134074_1007039	All Organisms → cellular organisms → Bacteria	3606	Open in IMG/M
3300017657\|Ga0134074_1025669	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1956	Open in IMG/M
3300017657\|Ga0134074_1070184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1191	Open in IMG/M
3300018431\|Ga0066655_10654446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	710	Open in IMG/M
3300018433\|Ga0066667_10077857	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2125	Open in IMG/M
3300018433\|Ga0066667_10264466	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1313	Open in IMG/M
3300018468\|Ga0066662_12232500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	574	Open in IMG/M
3300018482\|Ga0066669_10414788	Not Available	1145	Open in IMG/M
3300018482\|Ga0066669_11553026	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	603	Open in IMG/M
3300024249\|Ga0247676_1029748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	874	Open in IMG/M
3300026295\|Ga0209234_1175471	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300026296\|Ga0209235_1006204	All Organisms → cellular organisms → Bacteria	6690	Open in IMG/M
3300026296\|Ga0209235_1129224	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1046	Open in IMG/M
3300026300\|Ga0209027_1115541	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300026301\|Ga0209238_1139160	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	770	Open in IMG/M
3300026306\|Ga0209468_1141975	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	650	Open in IMG/M
3300026307\|Ga0209469_1012736	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	3106	Open in IMG/M
3300026307\|Ga0209469_1098338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	816	Open in IMG/M
3300026310\|Ga0209239_1044338	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300026310\|Ga0209239_1243085	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300026313\|Ga0209761_1003784	All Organisms → cellular organisms → Bacteria	10007	Open in IMG/M
3300026313\|Ga0209761_1246604	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300026316\|Ga0209155_1172136	Not Available	708	Open in IMG/M
3300026318\|Ga0209471_1003797	All Organisms → cellular organisms → Bacteria	8435	Open in IMG/M
3300026323\|Ga0209472_1208528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	653	Open in IMG/M
3300026324\|Ga0209470_1053661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	1933	Open in IMG/M
3300026325\|Ga0209152_10248793	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300026326\|Ga0209801_1088723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1349	Open in IMG/M
3300026326\|Ga0209801_1150394	Not Available	982	Open in IMG/M
3300026342\|Ga0209057_1048411	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300026343\|Ga0209159_1272876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300026494\|Ga0257159_1097978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300026529\|Ga0209806_1182251	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300026536\|Ga0209058_1355371	Not Available	508	Open in IMG/M
3300026547\|Ga0209156_10007642	All Organisms → cellular organisms → Bacteria	7391	Open in IMG/M
3300026547\|Ga0209156_10019783	All Organisms → cellular organisms → Bacteria	4064	Open in IMG/M
3300026548\|Ga0209161_10306488	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300027671\|Ga0209588_1224009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300027725\|Ga0209178_1051367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1323	Open in IMG/M
3300027765\|Ga0209073_10177971	Not Available	799	Open in IMG/M
3300027874\|Ga0209465_10140913	Not Available	1195	Open in IMG/M
3300027909\|Ga0209382_10472082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1386	Open in IMG/M
3300031720\|Ga0307469_11618758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300031753\|Ga0307477_10087666	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2161	Open in IMG/M
3300032180\|Ga0307471_100094040	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	2693	Open in IMG/M
3300032180\|Ga0307471_101074487	Not Available	971	Open in IMG/M
3300032180\|Ga0307471_101340851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	877	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.75%
Host-Associated	Host-Associated	1.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.88%
Aquatic	Environmental → Aquatic	1.88%
Plants	Host-Associated → Plants	1.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.88%
Sediment	Environmental → Aquatic → Sediment	1.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.38%
Loam	Environmental → Terrestrial → Soil → Loam	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.25%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.25%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	21.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	21.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.12%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10805161	3300002557	Grasslands Soil	LHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRSGVGVEIGS*
JGI25383J37093_100147741	3300002560	Grasslands Soil	ALHRDAEVMREVQVDGVVEVTARVEAWLLGQLRKEGIGVEIGFSP*
JGI25383J37093_100490481	3300002560	Grasslands Soil	ALHRDAEVMREVQVDGVVEVTARVEAWLLGQLRREGIGVEIGFSP*
JGI25383J37093_101401071	3300002560	Grasslands Soil	RIRVPLGNGKLLAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS*
JGI25384J37096_100204043	3300002561	Grasslands Soil	GKLLAALHRDAEVMREVQVDGVVEVTARVEAWLLGQLRKEGIGVEIGFSP*
JGI25384J37096_100468921	3300002561	Grasslands Soil	LAALHRDAEVMREVQVDGVVEVTARVEAWLLGQLRREGIGVEIGFSP*
JGI25384J37096_101146511	3300002561	Grasslands Soil	KLLAALHRDAEVMTEVQVDGVVEVTARVQAWLLGKLRREGVGVVLGS*
JGI25382J43887_100383933	3300002908	Grasslands Soil	KLLAALHRDAEVMREVQVDGVVEVTARVEAWLLGQLRKEGIGVEIGFSP*
JGI25382J43887_102973932	3300002908	Grasslands Soil	KLLAALHRDAEVMREVQVDGVVEVTARVEAWLLGKLRREGIIVEIGW*
JGI25382J43887_103379162	3300002908	Grasslands Soil	RDSEVMGEAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP*
JGI25382J43887_104916041	3300002908	Grasslands Soil	AALHRDAEVMAEMQVDGVVQVTARVEAWLLGKLRREGIEVEIAP*
JGI25390J43892_100121703	3300002911	Grasslands Soil	MGEGKLLAALHRDAEVMQEAQVDGVVQVTARVEAWLLGKLRRQGIEVEIAP*
JGI25386J43895_101867371	3300002912	Grasslands Soil	ADGKLLAALHRDSEVMAESQADGVVEVTARVEAWLLGKLRREGITVEIGFEGS*
Ga0066674_100043221	3300005166	Soil	HRDAEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGS*
Ga0066683_100664133	3300005172	Soil	LHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0066683_101506253	3300005172	Soil	ASLHRDSEVMAEVQVDGVVEVTARVEAPLLGRLRRAGIAVDIVP*
Ga0066683_102950602	3300005172	Soil	LLAALHRDSEVMAEIQVDGVVEVTARVEAWLLGKLRREGVEVVLGGGL*
Ga0066683_108431461	3300005172	Soil	LASLHRDSEVMAEVQVDGVVEVTARVEAPLLGRLRRAGIAVDIVP*
Ga0066679_100626441	3300005176	Soil	AALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRRDGIEVEIGD*
Ga0066690_104092511	3300005177	Soil	LAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRSGVGVEIGS*
Ga0066684_101312301	3300005179	Soil	EDGKLLAALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVVIGG*
Ga0066678_101946362	3300005181	Soil	ALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVIIGG*
Ga0066678_108020082	3300005181	Soil	LAALHRDSEIMAEVQVDGVVQVTARVEAWLLGKLRREGVEVVLGG*
Ga0066686_101031553	3300005446	Soil	KLLAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0066686_106554341	3300005446	Soil	ACIRVPVGDGKLLAALHRDAEVMQEAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP*
Ga0066689_103122952	3300005447	Soil	HRDAEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGG*
Ga0066682_104654981	3300005450	Soil	ARIRVPLGNGKLLAALHRDAEVMAEAQVDGVVEVTARVDAWLLGKLRRYGVGVEIGS*
Ga0070706_1014880702	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GDGKLLAALHRDSEVMQEVQMDGMVEVTARVEAWVLGKLRREGVSVQIGS*
Ga0070698_1019783911	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	KLLAALHRDAEVLAETQVDGVVQVTARVQAWLLGRLRRDGVAVDIGP*
Ga0066697_107707751	3300005540	Soil	DGKLLAALHRDSEVLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS*
Ga0066701_108405212	3300005552	Soil	EVLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS*
Ga0066695_107682622	3300005553	Soil	ALHRDAEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGG*
Ga0066661_106683821	3300005554	Soil	AALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRSGVGVEIGS*
Ga0066707_100557441	3300005556	Soil	MTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGS*
Ga0066707_107818172	3300005556	Soil	LAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0066704_107704331	3300005557	Soil	IRVPIDDGKLLAALHRDAEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGS*
Ga0066698_108463582	3300005558	Soil	QVPVADGKLIAALHRDSEVMSEVQVDGVVEVTARVEARLLGKLRQQGITVEISV*
Ga0066699_102949331	3300005561	Soil	DGKLLAALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVDIGW*
Ga0066694_104140692	3300005574	Soil	EVMREAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP*
Ga0066696_105887531	3300006032	Soil	GKLLAALHRDAEVMREAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP*
Ga0066652_1001199961	3300006046	Soil	LLAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0066658_100456772	3300006794	Soil	DETQVDGVVEVTARVQAWMLGKLRRDGVGVIIGG*
Ga0066665_108192012	3300006796	Soil	LHRDAEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGG*
Ga0066659_103951362	3300006797	Soil	ATIRVPMGEGKLLAALHRDAEVMREAQVDGVVEVTARVEAWLLGKLRRLGIEVEIAP*
Ga0066659_104711731	3300006797	Soil	LGDGKLLAALHSDSEVLGEAQVDGVVEVTARVQAWLLGKLRREGVSVQIGS*
Ga0075426_100277084	3300006903	Populus Rhizosphere	MAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0099794_101476283	3300007265	Vadose Zone Soil	VTEGKLLAALHRDAEVMNQVQVDGIVHVTARVEARLLGQLRRQGVTVVINV*
Ga0066710_1005184481	3300009012	Grasslands Soil	AEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGS
Ga0066710_1007202233	3300009012	Grasslands Soil	VPLADGKLLAALHRDAEVMAETQVDGVVQVTARVEAWLLGKLRRQGIEVEIAP
Ga0066710_1008964412	3300009012	Grasslands Soil	LAALHRDAEVLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS
Ga0066710_1014334532	3300009012	Grasslands Soil	AALHRDSEVMAVAQVDGVVEVTARVEAWLLGKLRREGIEVELGP
Ga0066710_1030590441	3300009012	Grasslands Soil	IARIRVPMTHGKLLAALHRDAEVMREVQVDGVVEVTARVEAWLLGQLRREGIGVEIGFSP
Ga0099827_112505402	3300009090	Vadose Zone Soil	RPIACIRVPLEDGKLLAALHRDAEVMTEVQVDGVVEVTARVQAWLLGKLRREGVGVVLGS
Ga0066709_1013893801	3300009137	Grasslands Soil	VARIHVPIEDGKLLAALHRDSEVLHEAQVDGVVEVTARVEAWLLGKLRREGVSVQIGS*
Ga0127483_12732111	3300010142	Grasslands Soil	RIHVPVADGKLIAALHRDSEVMSEMQVDGVVEVTARVEARLLGKLRQQGIIVEISP*
Ga0134070_104135572	3300010301	Grasslands Soil	EVMAVAQVDGVVEVTARVEAWLLGKLRREGIDVEIGP*
Ga0134082_102477521	3300010303	Grasslands Soil	AALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRRDGIGVEIGD*
Ga0134088_102169771	3300010304	Grasslands Soil	RIHVPVADGKLIAALHRDSEVMSETQVDGVVEVTARVEARLLGKLRQQGIVVEISP*
Ga0134109_100085361	3300010320	Grasslands Soil	RDAEVMQEAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP*
Ga0134067_100595392	3300010321	Grasslands Soil	AALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRRDGVGVEIGE*
Ga0134067_103374961	3300010321	Grasslands Soil	RDAEVMQEAQVDGVVQVTARVEAWLLGKLRRQGIEVEIAP*
Ga0134086_100037721	3300010323	Grasslands Soil	ALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0134064_104582741	3300010325	Grasslands Soil	RPIARIRVPVGDGKLLAALHRDSEVLDETQADGVVEVTARVQAWMLGKLRRDGVGVVIGG
Ga0134063_100346761	3300010335	Grasslands Soil	PLGDGKLLAALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVDIGW*
Ga0134063_101465882	3300010335	Grasslands Soil	DGKLLAALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVVIGG*
Ga0134063_101532481	3300010335	Grasslands Soil	VGDGRLLAALHRDSEVMAEIQVDGVVEVTARVEAWLLGKLRREGVEVVLGGGL*
Ga0134063_103647982	3300010335	Grasslands Soil	LLAALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRRDGIGVEIGD*
Ga0134071_101344421	3300010336	Grasslands Soil	GRLLASLHRDSEVMAEVQVDGVVEVTARVEAPLLGRLRRAGIAVDIVP*
Ga0134071_104948142	3300010336	Grasslands Soil	MAEVQVDGVVQVTARVEAWLLGKLRREGVEVVLGG*
Ga0134071_106860992	3300010336	Grasslands Soil	MGEGKLLAALHRDAEVMQEAQVNGVVEVTARVEAWLLGKLRRQGIEVEIDP*
Ga0134062_102725872	3300010337	Grasslands Soil	GKLLAALHRDSEVLDETQADGVVEVTARVQAWMLGKLRRDGVGVVIGG*
Ga0126379_117885182	3300010366	Tropical Forest Soil	VPVGNGRLLAELHREAHVLGEMQVDGVVEVTARVEAKMLGRLRRDGVEVVLGENTQND*
Ga0134126_106739761	3300010396	Terrestrial Soil	KLLATLHRDAEVMAEAQVDGVIEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0137392_111427032	3300011269	Vadose Zone Soil	VPLGNGKLLAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0137340_10393531	3300011405	Soil	GDGKLLAALHRDAEVIGQEQVDGVVVVTARVQASLLGRLRHEGVGVEILG*
Ga0137353_10925292	3300012157	Soil	VPLGDGKLLAALHRDAEVIGQEQVDGVVVVTARVQASLLGRLRHEGVGVEILG*
Ga0137350_10122961	3300012166	Soil	IAQVRVPLGDGKLLAALHRDAEVIGQEQVDGVVVVTARVQASLLGRLRHEGVGVEILG*
Ga0137388_105904862	3300012189	Vadose Zone Soil	RPVAKIRVPLADGKLLAALHRDSEVMGEIQADGVVEVTARVEAWLLGKLRRDGIAVEIGW
Ga0137388_107653362	3300012189	Vadose Zone Soil	AEVIQEQQVDGKVQVTARVKASLLGKLRREGVEVVLGG*
Ga0137383_110687242	3300012199	Vadose Zone Soil	VPVEDGKLLAALHRDAEVLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS*
Ga0137382_100201971	3300012200	Vadose Zone Soil	IRVPLGDGKLLAALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRREGIEVEIGD*
Ga0137363_102993582	3300012202	Vadose Zone Soil	DAEVMAEAQVDGVIEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0137374_112123251	3300012204	Vadose Zone Soil	AQIRVPVGDGRLLASLHRDSEIMAEVQVDGMVQVTARVEAWLLGKLRREGVEVVLGG*
Ga0137380_115225112	3300012206	Vadose Zone Soil	ALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRSGVGVEIGS*
Ga0137381_108556101	3300012207	Vadose Zone Soil	NGKLLAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRSGVGVEIGS*
Ga0137377_112610561	3300012211	Vadose Zone Soil	SETQVDGVVEVTARVEARLLGKLRQQGIIVEISP*
Ga0137387_109953342	3300012349	Vadose Zone Soil	ALHRDSEVMAEIQVDGVVEVTARVEAWLLGKLRREGVEVVLGGGL*
Ga0137372_104904733	3300012350	Vadose Zone Soil	VARIHVPVADGKLIAALHRDSEVMSETQVDGVVEVTARVEARLLGKLRQQGIIVEISP*
Ga0137386_1000107915	3300012351	Vadose Zone Soil	LRPVARIRVPLGDGKLLAALHRDSEVMGEAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP*
Ga0137386_110153722	3300012351	Vadose Zone Soil	LRPVARIRVPLGDGKLLAALHRDSEVMGEAQVDGVVEVTARVEAWLLGKLRREGIEVEIGP*
Ga0137384_108015512	3300012357	Vadose Zone Soil	ADGKLIAALHRDSEVMSEAQVDGVVEITARVEARLLGKLRQQGIIVEISP*
Ga0137361_109600641	3300012362	Vadose Zone Soil	LHRDAEVLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS*
Ga0134037_10453751	3300012372	Grasslands Soil	RIHVPVADGKLIAALHRDSEVMSETQVDGVVEVTARVEARLLGKLRQQGIIVEISP*
Ga0137395_100246494	3300012917	Vadose Zone Soil	LRPIARIRVPLADGKLLAALHRDSEVMAESQADGVVEVTARVEAWLLGKLRREGITVEIGFEGS*
Ga0137395_103550582	3300012917	Vadose Zone Soil	RVPLGNGKLLAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRREGVGVVLGS*
Ga0137419_100520811	3300012925	Vadose Zone Soil	RDAEVMAEAQVDGVIEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0137407_100537644	3300012930	Vadose Zone Soil	VPLGNGKLLATLHRDAEVMAEAQVDGVIEVTARVEAWLLGKLRRYGVGVEIGS*
Ga0137407_113478281	3300012930	Vadose Zone Soil	LGNGKLLAALHREAEVMAEAQVDGVVEVTARVEAWLLGKLRRSGVGVEIGS*
Ga0137407_119698712	3300012930	Vadose Zone Soil	VARIQVPVEDGKLLAALHRDAEVLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS*
Ga0134110_101851472	3300012975	Grasslands Soil	VGDGKLLAALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVVIGG*
Ga0134110_102993542	3300012975	Grasslands Soil	LAALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRRDGIGVEIGD*
Ga0134075_103308462	3300014154	Grasslands Soil	LLAALHRDAEVMTEVPMDGVVEVTARVQAWLLGKLRREGVVVVLGS*
Ga0134075_103586301	3300014154	Grasslands Soil	MAVAQVDGVVEVTARVEAWLLGKLRREGIEVELGP*
Ga0134075_103793322	3300014154	Grasslands Soil	AEVQVDGVVEVTARVEAPLLGRLRRAGIAVDIVP*
Ga0134078_103653241	3300014157	Grasslands Soil	EVMQEAQVDGVVQVTARVEAWLLGKLRRQGIEVEIAP*
Ga0134078_104320411	3300014157	Grasslands Soil	RVPLGDGKLLAALHRDSEVLGEAQVDGVVEVTARVQAWLLGKLRRAGVGVEIGG*
Ga0134078_106681411	3300014157	Grasslands Soil	MGEGKLLAALHRDAEVMQEAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP*
Ga0134079_101661602	3300014166	Grasslands Soil	IARIRVPLGDGKLLAALHRDSEVLGELQVDGVVEVTARVQARMLGKLRREGIEVEIGD*
Ga0137403_113077472	3300015264	Vadose Zone Soil	VPLDDGKLLAALHRQSEVLQETQVDGVVEVTARVEAWLLGKLRREGVAVEIGA*
Ga0134085_104825601	3300015359	Grasslands Soil	RDAEVMAEAQVDGVVEVTARVEAWLLGKLRRSGVGVEIGS*
Ga0134085_105760071	3300015359	Grasslands Soil	KLLAALHRDAEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGG*
Ga0134069_11161852	3300017654	Grasslands Soil	IARIRVPIGNGKLLATLHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS
Ga0134112_102268471	3300017656	Grasslands Soil	EVRAETQVDGVVQVTARVEAWLLGKLRRQGIEVEIAP
Ga0134074_10070391	3300017657	Grasslands Soil	LLAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS
Ga0134074_10256691	3300017657	Grasslands Soil	KLLAALHRDAEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGG
Ga0134074_10701842	3300017657	Grasslands Soil	EVMQEAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP
Ga0066655_106544462	3300018431	Grasslands Soil	LRPIARIHVPLGDGKLLAALHRDAEVLAETQVDGVVQVTARVQAWLLGRLRRDGVGVEIG
Ga0066667_100778571	3300018433	Grasslands Soil	PIARIRVPLGDGKLLAALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRRDGVGVEIGD
Ga0066667_102644663	3300018433	Grasslands Soil	DGKLIAALHRDSEVMSETQVDGVVEVTARVEARLLGKLRQQGIIVEISP
Ga0066662_122325002	3300018468	Grasslands Soil	LAALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS
Ga0066669_104147881	3300018482	Grasslands Soil	SEVLGELQVDGVVEVTARVQARMLGKLRREGIEVEIGD
Ga0066669_115530262	3300018482	Grasslands Soil	DGKLLAALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVDIGW
Ga0247676_10297482	3300024249	Soil	LLAELHRESHVLGEVHVDGVVEVTARVEARMLGRLRREGVEVELGEARGESEA
Ga0209234_11754711	3300026295	Grasslands Soil	PVARIRVPLGDGKLLAALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRREGIEVEIGD
Ga0209235_10062041	3300026296	Grasslands Soil	PIARIRVPMTHGKLLAALHRDAEVMREVQVDGVVEVTARVEAWLLGQLRKEGIGVEIGFS
Ga0209235_11292242	3300026296	Grasslands Soil	PIARIRVPMTHGKLLAALHRDAEVMREVQVDGVVEVTARVEAWLLGQLRREGIGVEIGFS
Ga0209027_11155411	3300026300	Grasslands Soil	VLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS
Ga0209238_11391601	3300026301	Grasslands Soil	MGEGKLLAALHRDAEVMREAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP
Ga0209468_11419751	3300026306	Soil	LHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRSGVGVEIGS
Ga0209469_10127362	3300026307	Soil	ALHRDAEVMTEVQMDGVVEVTARVQAWLLGKLRREGVEVVLGS
Ga0209469_10983382	3300026307	Soil	LRPIARIRVPLGNGKLLAALHRDAEVMAETQVDGVVEVTARVEAWLLGKLRRYGVGVEIG
Ga0209239_10443383	3300026310	Grasslands Soil	LAALHRDSEVLGELQVDGVVEVTARVQARMLGKLRREGIEVEIGD
Ga0209239_12430852	3300026310	Grasslands Soil	VLGELQVDGVVEVTARVQAWMLGKLRRDGIGVEIGD
Ga0209761_100378410	3300026313	Grasslands Soil	EVMREVQVDGVVEVTARVEAWLLGKLRREGIIVEIGW
Ga0209761_12466042	3300026313	Grasslands Soil	LAALHRDAEVMTEVQVDGVVEVTARVQAWLLGKLRREGVGVVLGS
Ga0209155_11721361	3300026316	Soil	VMQEAQVDGVVQVTARVEAWLLGKLRRQGIEVEIAP
Ga0209471_10037975	3300026318	Soil	IARIRVPLGDGKLLAALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVDIGW
Ga0209472_12085281	3300026323	Soil	IRVPVGDGKLLAALHRDAEVMQEAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP
Ga0209470_10536612	3300026324	Soil	LGDGKLLAALHRDAEVLAETQVDGVVQVTARVQAWLLGRLRRDGVGVEIG
Ga0209152_102487931	3300026325	Soil	AALHRDAEVLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS
Ga0209801_10887231	3300026326	Soil	IARIRVPVGDGKLLAALHRDSEVLDETQVDGVVEVTARVQAWMLGKLRRDGVGVIIGG
Ga0209801_11503941	3300026326	Soil	KLLAALHRDSEVMAEIQVDGVVEVTARVEAWLLGKLRREGVEVVLGGGL
Ga0209057_10484113	3300026342	Soil	VPLANGKLLAALHRDAEVMAEMQVDGVVQVTARVEAWLLGKLRREGIEVEIAP
Ga0209159_12728762	3300026343	Soil	ALHRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS
Ga0257159_10979781	3300026494	Soil	LAALHRESEVLREAQVDGVVEVTARVEAWLLGKLRRDGVSVEIGI
Ga0209806_11822512	3300026529	Soil	HRDAEVMAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS
Ga0209058_13553711	3300026536	Soil	KLIAALHRDSEVMSEVQVDGVVEVTARVEARLLGKLRQQGITVEISV
Ga0209156_100076421	3300026547	Soil	DGKLLAALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRRDGVGVEIGE
Ga0209156_100197834	3300026547	Soil	DGKLLAALHRDSEVLGELQVDGVVEVTARVQAWMLGKLRRDGIGVEIGD
Ga0209161_103064882	3300026548	Soil	LLAALHRDAEVMQEAQVDGVVEVTARVEAWLLGKLRRQGIEVEIAP
Ga0209588_12240091	3300027671	Vadose Zone Soil	ARIHVPVEDGKLLAALHRDSEVLHESQVDGVVEVTARVEAWLLGKLRREGVSVQIGS
Ga0209178_10513671	3300027725	Agricultural Soil	PVEDGKLLAMLHRDSEVLNEAQLDGVIEVTARVQAWLLGKLRRDGVEVVIG
Ga0209073_101779712	3300027765	Agricultural Soil	DGKLLAALHRDAEVLAETQVDGVVQVTARVQAWLLGRLRRDGVAVDIGP
Ga0209465_101409131	3300027874	Tropical Forest Soil	GDGRLLAELHRESHVLNEVHVDGVVEVTARVEARMLGRLRREGVDVELGERGHP
Ga0209382_104720822	3300027909	Populus Rhizosphere	IALVRVPLADGRLLAELHREAEVLQETHTDGVVEVTARLEARMIGRLRRDGVDVVLGER
Ga0307469_116187581	3300031720	Hardwood Forest Soil	PLGDGKLLAALHRDAEVLAETQVDGVVQVTARVQAWLLGRLRRDGVAVDIGP
Ga0307477_100876661	3300031753	Hardwood Forest Soil	ARISVALGDGKLLAALHRDAEVMGQQQTDGVVVVTARVEARLLGQLRRGGVSVEILGSSPPP
Ga0307471_1000940401	3300032180	Hardwood Forest Soil	IARIRVPLGNGKLLAALHRDAEVLAEAQVDGVVEVTARVEAWLLGKLRRYGVGVEIGS
Ga0307471_1010744871	3300032180	Hardwood Forest Soil	LGNGKLLATLHRDAEVMAEAQVDGVIEVTARVEAWLLGKLRRYGVGVEIGS
Ga0307471_1013408511	3300032180	Hardwood Forest Soil	RVRVPLADGKLLAAIHRDAEVMAQQQSDGVVVVTARVEAQLLGRLRREGVSVEILG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041116

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences