Metagenome / Metatranscriptome Family F041103

Basic Information
Family ID	F041103
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	44 residues
Representative Sequence	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDLYRATQQQTYE
Number of Associated Samples	119
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.34 %
% of genes near scaffold ends (potentially truncated)	83.75 %
% of genes from short scaffolds (< 2000 bps)	88.12 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (64.375 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.875 % of family members)
Environment Ontology (ENVO)	Unclassified (26.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.875 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.29% β-sheet: 0.00% Coil/Unstructured: 55.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF13613	HTH_Tnp_4	2.50
PF13359	DDE_Tnp_4	2.50
PF13340	DUF4096	1.88
PF03400	DDE_Tnp_IS1	1.88
PF13592	HTH_33	1.25
PF13610	DDE_Tnp_IS240	1.25
PF13551	HTH_29	1.25
PF00296	Bac_luciferase	1.25
PF16889	Hepar_II_III_N	1.25
PF13751	DDE_Tnp_1_6	0.62
PF00342	PGI	0.62
PF13740	ACT_6	0.62
PF13384	HTH_23	0.62
PF04909	Amidohydro_2	0.62
PF13655	RVT_N	0.62
PF13546	DDE_5	0.62
PF01381	HTH_3	0.62
PF13289	SIR2_2	0.62
PF01978	TrmB	0.62
PF13005	zf-IS66	0.62
PF00817	IMS	0.62
PF00210	Ferritin	0.62
PF12762	DDE_Tnp_IS1595	0.62
PF11535	Calci_bind_CcbP	0.62
PF13649	Methyltransf_25	0.62
PF04313	HSDR_N	0.62
PF13193	AMP-binding_C	0.62
PF04218	CENP-B_N	0.62
PF00176	SNF2-rel_dom	0.62
PF05685	Uma2	0.62
PF02515	CoA_transf_3	0.62
PF03811	Zn_Tnp_IS1	0.62
PF13579	Glyco_trans_4_4	0.62
PF13408	Zn_ribbon_recom	0.62
PF13191	AAA_16	0.62
PF08238	Sel1	0.62
PF00206	Lyase_1	0.62
PF01555	N6_N4_Mtase	0.62
PF04471	Mrr_cat	0.62
PF05690	ThiG	0.62
PF00293	NUDIX	0.62
PF12680	SnoaL_2	0.62
PF01430	HSP33	0.62
PF03781	FGE-sulfatase	0.62
PF07969	Amidohydro_3	0.62
PF13586	DDE_Tnp_1_2	0.62
PF13186	SPASM	0.62
PF14319	Zn_Tnp_IS91	0.62
PF02900	LigB	0.62
PF13565	HTH_32	0.62
PF01609	DDE_Tnp_1	0.62
PF13594	Obsolete Pfam Family	0.62
PF02371	Transposase_20	0.62
PF07724	AAA_2	0.62
PF07592	DDE_Tnp_ISAZ013	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	1.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.25
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.62
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.62
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.62
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.62
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.62
COG3677	Transposase InsA	Mobilome: prophages, transposons [X]	0.62
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.62
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.62
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.62
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.62
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.62
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.62
COG2022	Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis)	Coenzyme transport and metabolism [H]	0.62
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.62
COG1281	Redox-regulated molecular chaperone, HSP33 family	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.62
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.62
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.62
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.62 %
Unclassified	root	N/A	34.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.62 %
Unclassified	root	N/A	34.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.38 %
Unclassified	root	N/A	34.38 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.38 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	4.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.12 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.25 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.62 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.62 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	6.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.25 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	4.38 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.12 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6.88 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	4.38 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	3.12 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.12 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	1.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.25 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.62 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.62 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.62 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.62 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.62 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.62 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	3.12 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	1.88 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.25 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.25 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	0.62 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.62 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.62 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.62 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.62 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.62 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.62 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.12 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Beggiatoa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa	1.25 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.25 %
unclassified Microgenomates group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group	0.62 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Thioploca	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thioploca	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.62 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.62 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.62 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.62 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	0.62 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.12 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
unclassified Beggiatoa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa	1.25 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.25 %
Desulfobacula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula	0.62 %
Microgenomates group bacterium RBG_16_45_19	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium RBG_16_45_19	0.62 %
unclassified Ktedonobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae	0.62 %
Geotalea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geotalea	0.62 %
Luteolibacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter	0.62 %
Thioploca ingrica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thioploca → Thioploca ingrica	0.62 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	0.62 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.12 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.88 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1.25 %
Beggiatoa sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp.	0.62 %
Desulfobacula toluolica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	0.62 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	0.62 %
Luteolibacter marinus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter → Luteolibacter marinus	0.62 %
Beggiatoa sp. 'Orange Guaymas'	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp. 'Orange Guaymas'	0.62 %
Geotalea toluenoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geotalea → Geotalea toluenoxydans	0.62 %
Microgenomates group bacterium RBG_16_45_19	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium RBG_16_45_19	0.62 %
Thioploca ingrica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thioploca → Thioploca ingrica	0.62 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	0.62 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.62 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.62 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	0.62 %
uncultured bacterium psy1	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_12117340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	590	Open in IMG/M
3300004281\|Ga0066397_10014896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1071	Open in IMG/M
3300005332\|Ga0066388_100601426	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300005332\|Ga0066388_100644445	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300005332\|Ga0066388_101365244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp.	1228	Open in IMG/M
3300005332\|Ga0066388_101722455	Not Available	1110	Open in IMG/M
3300005332\|Ga0066388_104405362	Not Available	717	Open in IMG/M
3300005332\|Ga0066388_105102753	Not Available	667	Open in IMG/M
3300005467\|Ga0070706_101311989	Not Available	664	Open in IMG/M
3300005586\|Ga0066691_10954427	Not Available	504	Open in IMG/M
3300005615\|Ga0070702_100878962	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300005713\|Ga0066905_101096167	Not Available	707	Open in IMG/M
3300005764\|Ga0066903_101683115	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300005764\|Ga0066903_102598229	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005829\|Ga0074479_10678018	Not Available	523	Open in IMG/M
3300005937\|Ga0081455_10228147	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300006049\|Ga0075417_10036453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2065	Open in IMG/M
3300006049\|Ga0075417_10626752	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006058\|Ga0075432_10501974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	541	Open in IMG/M
3300006796\|Ga0066665_11130296	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300006797\|Ga0066659_10223320	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300006844\|Ga0075428_100193702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2198	Open in IMG/M
3300006844\|Ga0075428_101307602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geotalea → Geotalea toluenoxydans	762	Open in IMG/M
3300006846\|Ga0075430_100485354	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300006846\|Ga0075430_100986886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp. 'Orange Guaymas'	694	Open in IMG/M
3300006852\|Ga0075433_10605672	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300006894\|Ga0079215_10842287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	647	Open in IMG/M
3300006969\|Ga0075419_10578994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	786	Open in IMG/M
3300009012\|Ga0066710_100808646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1437	Open in IMG/M
3300009038\|Ga0099829_10053300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3005	Open in IMG/M
3300009038\|Ga0099829_11481980	Not Available	560	Open in IMG/M
3300009038\|Ga0099829_11614771	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300009038\|Ga0099829_11696661	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009089\|Ga0099828_10347081	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300009090\|Ga0099827_10018189	All Organisms → cellular organisms → Bacteria → Proteobacteria	4805	Open in IMG/M
3300009090\|Ga0099827_10198059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1669	Open in IMG/M
3300009090\|Ga0099827_10581101	Not Available	966	Open in IMG/M
3300009090\|Ga0099827_11946179	Not Available	512	Open in IMG/M
3300009090\|Ga0099827_11949928	Not Available	511	Open in IMG/M
3300009094\|Ga0111539_10558819	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300009094\|Ga0111539_13076494	Not Available	538	Open in IMG/M
3300009100\|Ga0075418_12709111	Not Available	541	Open in IMG/M
3300009147\|Ga0114129_10420778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Luteolibacter → Luteolibacter marinus	1757	Open in IMG/M
3300009147\|Ga0114129_11207984	Not Available	941	Open in IMG/M
3300009147\|Ga0114129_12513155	Not Available	616	Open in IMG/M
3300009156\|Ga0111538_13721432	Not Available	528	Open in IMG/M
3300009162\|Ga0075423_12624084	Not Available	551	Open in IMG/M
3300009506\|Ga0118657_10328321	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium RBG_16_45_19	2044	Open in IMG/M
3300009691\|Ga0114944_1223001	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	758	Open in IMG/M
3300009792\|Ga0126374_11606341	Not Available	537	Open in IMG/M
3300009808\|Ga0105071_1022431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	911	Open in IMG/M
3300009811\|Ga0105084_1003333	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	2108	Open in IMG/M
3300009815\|Ga0105070_1119201	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300009818\|Ga0105072_1007839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	1848	Open in IMG/M
3300009818\|Ga0105072_1129304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	521	Open in IMG/M
3300010036\|Ga0126305_10180939	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300010043\|Ga0126380_10271282	Not Available	1188	Open in IMG/M
3300010044\|Ga0126310_10753372	Not Available	744	Open in IMG/M
3300010046\|Ga0126384_11279861	Not Available	679	Open in IMG/M
3300010046\|Ga0126384_11549848	Not Available	622	Open in IMG/M
3300010047\|Ga0126382_10213976	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300010047\|Ga0126382_10656733	Not Available	872	Open in IMG/M
3300010323\|Ga0134086_10053901	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300010326\|Ga0134065_10118453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	897	Open in IMG/M
3300010333\|Ga0134080_10014897	All Organisms → cellular organisms → Bacteria → Proteobacteria	2819	Open in IMG/M
3300010356\|Ga0116237_11038476	Not Available	687	Open in IMG/M
3300010360\|Ga0126372_12178275	Not Available	603	Open in IMG/M
3300010362\|Ga0126377_10858639	Not Available	969	Open in IMG/M
3300010362\|Ga0126377_12485087	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300010366\|Ga0126379_10314340	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium psy1	1580	Open in IMG/M
3300010397\|Ga0134124_12193074	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	592	Open in IMG/M
3300010863\|Ga0124850_1066107	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300011269\|Ga0137392_10313215	Not Available	1298	Open in IMG/M
3300012189\|Ga0137388_11145356	Not Available	715	Open in IMG/M
3300012203\|Ga0137399_11420170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thioploca → Thioploca ingrica	580	Open in IMG/M
3300012206\|Ga0137380_10776428	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	828	Open in IMG/M
3300012349\|Ga0137387_10767219	Not Available	698	Open in IMG/M
3300012349\|Ga0137387_11014852	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012353\|Ga0137367_10643676	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300012359\|Ga0137385_11223753	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300012362\|Ga0137361_10139363	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300012362\|Ga0137361_10200956	Not Available	1803	Open in IMG/M
3300012362\|Ga0137361_11426429	Not Available	615	Open in IMG/M
3300012363\|Ga0137390_11276567	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300012494\|Ga0157341_1002304	All Organisms → cellular organisms → Bacteria → Proteobacteria	1250	Open in IMG/M
3300012513\|Ga0157326_1088505	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012685\|Ga0137397_10720939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	740	Open in IMG/M
3300012917\|Ga0137395_10169095	Not Available	1507	Open in IMG/M
3300012922\|Ga0137394_10017829	All Organisms → cellular organisms → Bacteria	5650	Open in IMG/M
3300012922\|Ga0137394_10305028	Not Available	1360	Open in IMG/M
3300012929\|Ga0137404_11028546	Not Available	754	Open in IMG/M
3300012948\|Ga0126375_12089601	Not Available	503	Open in IMG/M
3300012961\|Ga0164302_11303741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	587	Open in IMG/M
3300012971\|Ga0126369_11162096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	861	Open in IMG/M
3300013306\|Ga0163162_10198867	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	2133	Open in IMG/M
3300015241\|Ga0137418_10323819	Not Available	1280	Open in IMG/M
3300015371\|Ga0132258_10057714	All Organisms → cellular organisms → Bacteria	8923	Open in IMG/M
3300015371\|Ga0132258_10086218	All Organisms → cellular organisms → Bacteria → Proteobacteria	7342	Open in IMG/M
3300015371\|Ga0132258_10580393	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300015371\|Ga0132258_10658811	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300015371\|Ga0132258_11640039	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1623	Open in IMG/M
3300015373\|Ga0132257_100635989	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300015373\|Ga0132257_102855474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	630	Open in IMG/M
3300015374\|Ga0132255_100619704	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1601	Open in IMG/M
3300016357\|Ga0182032_10581982	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	929	Open in IMG/M
3300016387\|Ga0182040_11554182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	563	Open in IMG/M
3300016404\|Ga0182037_11468392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	604	Open in IMG/M
3300018061\|Ga0184619_10073634	All Organisms → cellular organisms → Bacteria → Proteobacteria	1511	Open in IMG/M
3300018063\|Ga0184637_10301142	Not Available	971	Open in IMG/M
3300018063\|Ga0184637_10563042	Not Available	653	Open in IMG/M
3300018079\|Ga0184627_10008795	All Organisms → cellular organisms → Bacteria	4666	Open in IMG/M
3300018079\|Ga0184627_10148734	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300018432\|Ga0190275_12980544	Not Available	547	Open in IMG/M
3300018466\|Ga0190268_10665008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	756	Open in IMG/M
3300018468\|Ga0066662_10359270	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300019248\|Ga0180117_1173627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1240	Open in IMG/M
3300019789\|Ga0137408_1316944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1543	Open in IMG/M
3300020170\|Ga0179594_10012670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	2393	Open in IMG/M
3300025910\|Ga0207684_10643619	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300025942\|Ga0207689_11304792	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300025961\|Ga0207712_10282665	Not Available	1355	Open in IMG/M
3300025961\|Ga0207712_10524164	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1016	Open in IMG/M
3300027056\|Ga0209879_1006630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1803	Open in IMG/M
3300027169\|Ga0209897_1040740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	673	Open in IMG/M
3300027169\|Ga0209897_1040976	Not Available	671	Open in IMG/M
3300027277\|Ga0209846_1018750	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300027379\|Ga0209842_1021104	Not Available	1255	Open in IMG/M
3300027384\|Ga0209854_1038882	Not Available	806	Open in IMG/M
3300027384\|Ga0209854_1054133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	694	Open in IMG/M
3300027511\|Ga0209843_1008422	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300027527\|Ga0209684_1022420	Not Available	971	Open in IMG/M
3300027671\|Ga0209588_1148670	Not Available	743	Open in IMG/M
3300027882\|Ga0209590_10596317	Not Available	711	Open in IMG/M
3300027882\|Ga0209590_11065079	Not Available	502	Open in IMG/M
3300027903\|Ga0209488_10594626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300027903\|Ga0209488_10619282	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300027907\|Ga0207428_10474391	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300027907\|Ga0207428_11270485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	511	Open in IMG/M
3300027957\|Ga0209857_1043601	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300028380\|Ga0268265_11269776	Not Available	736	Open in IMG/M
3300028828\|Ga0307312_10135348	Not Available	1554	Open in IMG/M
3300030516\|Ga0268255_10167597	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	640	Open in IMG/M
3300030619\|Ga0268386_10506118	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	825	Open in IMG/M
3300031093\|Ga0308197_10035676	Not Available	1200	Open in IMG/M
3300031114\|Ga0308187_10265042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	630	Open in IMG/M
3300031424\|Ga0308179_1003793	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300031679\|Ga0318561_10332509	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031720\|Ga0307469_10270889	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300031740\|Ga0307468_100114349	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300031740\|Ga0307468_101054029	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300031744\|Ga0306918_11404298	Not Available	535	Open in IMG/M
3300031910\|Ga0306923_10184926	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2380	Open in IMG/M
3300031941\|Ga0310912_10538523	Not Available	910	Open in IMG/M
3300031947\|Ga0310909_11290026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300031954\|Ga0306926_10765958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1166	Open in IMG/M
3300032180\|Ga0307471_103861814	Not Available	530	Open in IMG/M
3300032782\|Ga0335082_10665434	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300034644\|Ga0370548_015311	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300034672\|Ga0314797_038967	Not Available	827	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.88%
Host-Associated	Host-Associated	22.50%
Engineered	Engineered	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.25%
Plants	Host-Associated → Plants	22.50%
Aquatic	Environmental → Aquatic	5.62%
Wastewater	Engineered → Wastewater	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.75%
Sediment	Environmental → Aquatic → Sediment	3.75%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Marine	Environmental → Aquatic → Marine	0.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.62%
Phylloplane	Host-Associated → Plants → Phylloplane	0.62%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.12%
Loam	Environmental → Terrestrial → Soil → Loam	9.38%
Sand	Environmental → Terrestrial → Soil → Sand	8.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.62%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.12%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	8.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.62%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.62%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	8.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.25%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.62%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.62%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.62%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041103

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_121173402	3300000890	Soil	MGLQIRDDRQMKALTGLSQAQFHHLLPVFSDIYQATQQKTYEEGLTSGMRVRK
Ga0066397_100148961	3300004281	Tropical Forest Soil	MEEANRMGLQIRDERQMKALTGLSQDQFDHLLPCFSAIYEAT
Ga0066388_1006014261	3300005332	Tropical Forest Soil	MGIQVRDEHHMKAFTGLSQAQCDALVPVFSAIYEATQQQRSAEGVTSG
Ga0066388_1006444454	3300005332	Tropical Forest Soil	MGLQIRDERQMPALTGLSPAQFDSLLPVFRDLSQATPQRTYEEGVQSGTRRR
Ga0066388_1013652443	3300005332	Tropical Forest Soil	MGLLIRDDRQMKAVTGLSQAQFDHVLPVCTDLYQAAQQQT*
Ga0066388_1017224552	3300005332	Tropical Forest Soil	MGRLIRDDRQMKAFTGLSQAQCDPLLPVFSAMDQATQQHT*
Ga0066388_1044053622	3300005332	Tropical Forest Soil	VGRHIRDDRQMQALTGLSRAPWDSLLPVFRDLYQATQQPASAGG
Ga0066388_1051027532	3300005332	Tropical Forest Soil	MGLLIRDDRQRKALTGLSQAQFDHLLPVFNDLYQAIQHKTYEEGVESGTR
Ga0070706_1013119891	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGLQIRDDRQMKALTGLSQAQFDQLLSVFRDLYQATQQNTYDAGVESGKVFQSC*
Ga0066691_109544271	3300005586	Soil	MGLQIRDNRQRKALTGLSQAQFDHLLPVFSDIYEATQQK
Ga0070702_1008789621	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MGLQIRDDRQMKALTGLSQAQFNHLLPIFSDLYQTTQQKTY
Ga0066905_1010961671	3300005713	Tropical Forest Soil	MGLQIRDERQMKALTGLSQAQFDHLLPFFSAIYETTQQKTYAE
Ga0066903_1016831152	3300005764	Tropical Forest Soil	MGLQIQDARQMKAFIVLSQAQFDHLLAVFGDIYQAT*
Ga0066903_1025982292	3300005764	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQDQFDHLLPVFSAIYQAAQQQTYEKG
Ga0074479_106780182	3300005829	Sediment (Intertidal)	MGLQIRDDRQMKALTGLSQEQFDYLLPVFSEISWET
Ga0081455_102281472	3300005937	Tabebuia Heterophylla Rhizosphere	MGMHIRDDRQMKALTGLSQAQFDHLLPVFNDLYQAIQHKTSEEGVASGTRTRTQ*
Ga0075417_100364534	3300006049	Populus Rhizosphere	MGLHIRDERQRKALPGLSQAPCDSLLRVFSDLYRAAQQHA*
Ga0075417_106267521	3300006049	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDLYRATQQ
Ga0075432_105019741	3300006058	Populus Rhizosphere	MGLQIRDDRQMKALTGLSQDQFNHLLPVFSDIYQESIPLI*
Ga0066665_111302962	3300006796	Soil	MGLHIRDDRQRQALTGLSQTQCDSLLLAFRGMSLGSQQKTYAAGVESGTRR
Ga0066659_102233203	3300006797	Soil	MGLLIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQTYEEGVASGTRR
Ga0075428_1001937025	3300006844	Populus Rhizosphere	MGLHIRDDRQMQALTGLSQTQFDYLLLAFRDMYQVSQ
Ga0075428_1013076022	3300006844	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDIYRATQ
Ga0075430_1004853541	3300006846	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDLYRATQQQTYE
Ga0075430_1009868862	3300006846	Populus Rhizosphere	MGMQIRDERQMKALTGLSQTQFDHLLPVFSDIYQTTQQQTYEKGV*
Ga0075433_106056721	3300006852	Populus Rhizosphere	MGLLIRDDRQMKALTGLSQVQFDYLLPVFTDMYQAARQHT*
Ga0079215_108422872	3300006894	Agricultural Soil	MGLLMRDNRQMKALTGLSQDQFDFLLPVFSNIYRAAQQKTYEDGVRAGQRK
Ga0079216_111067121	3300006918	Agricultural Soil	MGLLIRDNRQMKALTGLSQDQFDDLLPVFSTIYRDAQQKIYEDGVKSGQRKRQPGG
Ga0075419_105789942	3300006969	Populus Rhizosphere	MGLQIRDDRQMKALTGLSQAQFDQLLPVFSDLYQGNTAKNV*
Ga0066710_1008086463	3300009012	Grasslands Soil	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSDLYQA
Ga0099829_100533005	3300009038	Vadose Zone Soil	MGLQIRDDRQRKALTGLSQAQFDPLLSVFSAIYRATQQKTYEAGV
Ga0099829_114819801	3300009038	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAQFDHLLSVFSDVYRTTQQQTYAEGVA
Ga0099829_116147712	3300009038	Vadose Zone Soil	MEIQIRDDRQMKALTGLSQAQFDSLLPVFSDIYQA
Ga0099829_116966611	3300009038	Vadose Zone Soil	MGMQIRDERQMKALTGLSQAQFDHLLPVFSDIYQTTQQQTYDKGV
Ga0099828_103470811	3300009089	Vadose Zone Soil	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSDIYQATQQHTYETGVASGTRRR
Ga0099827_100181898	3300009090	Vadose Zone Soil	MGLHIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQTYEEGV
Ga0099827_101980591	3300009090	Vadose Zone Soil	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDSYRATQQQTYEEGVQSGTRR
Ga0099827_105811013	3300009090	Vadose Zone Soil	MGLQIRDDRQRKALTGLSQAQFDSLLSVFSDIYRATQQKTYEAGVASG
Ga0099827_119461792	3300009090	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAQFDHLLSVFSDLYQATQHNTYEEGVASGTRRRKP
Ga0099827_119499282	3300009090	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQTYEEGV
Ga0111539_105588193	3300009094	Populus Rhizosphere	MGMQIRDDRQMKALTGLSQAQFDHLLPVFNDLYQAIQHK
Ga0111539_130764942	3300009094	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDVYRAAQQQRYEEGSQS
Ga0075418_127091111	3300009100	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDIYRAAQQQRYEEGS*
Ga0114129_104207782	3300009147	Populus Rhizosphere	MGLQIRDDRQMKALTGLSQDQFHHLLPVFSDIYQA
Ga0114129_112079841	3300009147	Populus Rhizosphere	MGLHIRDDRQMQALTGLSQTQFDSLLLAFRDMYQVSQQKTY
Ga0114129_125131552	3300009147	Populus Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSDIYRATQQ
Ga0111538_137214322	3300009156	Populus Rhizosphere	MGLHIRDDRQMQALTGLSQTQFDYLLLAFRDMYQVSQQKTYEEGVESGTRRR
Ga0075423_126240841	3300009162	Populus Rhizosphere	MGIQVRDERHMKALTGLSQAQFDDLLSAFSDIYGARQRRHYEEGVASGT
Ga0118657_103283211	3300009506	Mangrove Sediment	MAMKIRDERQMKALTGLSPKQFDRLLIEFEQAYQG
Ga0114944_12230012	3300009691	Thermal Springs	MGMHIRDDRQMKALTGLSQAQFEHLLPVFNDMYQAAHQKTYA
Ga0126374_116063412	3300009792	Tropical Forest Soil	MGLQIRDERQMKALTGLSQAQFAHLLPVFSDLYQTT
Ga0105071_10224311	3300009808	Groundwater Sand	MGMQIRDERQMKALTGLSQAQCNHLLPVFSDIYQATQQKTYEKGIESGT
Ga0105084_10033332	3300009811	Groundwater Sand	MGLQIRDDRQMKALTGLSQAQFNHLLPVFRDIYRATQQKT
Ga0105070_11192012	3300009815	Groundwater Sand	MGLLIRDDRQMKALTGLSQDQFDHLLPVFSAIYQA
Ga0105072_10078393	3300009818	Groundwater Sand	MVLQIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQT
Ga0105072_11293042	3300009818	Groundwater Sand	MGLQIRDDRQMKALTGLSHAQFDSQLSVFSDIYRATQQQTSEEGVASGTRR
Ga0126305_101809391	3300010036	Serpentine Soil	PMGIQVRDERQMQAFTGLSQAQCDDLLPAFSDIYGATQRRH*
Ga0126380_102712822	3300010043	Tropical Forest Soil	MGLQMRDDRQMKALTGLSQAQFDHLLPVFRDIYRATQQQ
Ga0126310_107533722	3300010044	Serpentine Soil	MGIQVRDERQMQAFTGLSQAQFDDLLPAFSDIYGATQRRH*
Ga0126384_112798611	3300010046	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQVQFDHLLPVFSAIYQATQQQTYAQGVASGTRRRKPG
Ga0126384_115498482	3300010046	Tropical Forest Soil	MGMQIRDDRQMKALTGLSQAQFDHLLPVFNALYQAT
Ga0126382_102139761	3300010047	Tropical Forest Soil	MGLHIRDERQMKALTGLSQAQFDYLLPVFSDIYRATQQHTYEEGSQAGTR
Ga0126382_106567331	3300010047	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQVQFDSLLPVFTDIYQAARQHTYEK
Ga0134086_100539014	3300010323	Grasslands Soil	VGLQIRDERQMKALTGLSQDQVDHLLPCFSALYESTQHKT*
Ga0134065_101184531	3300010326	Grasslands Soil	PVGLQIRDERQMKALTGLSQDQVDHLLPCFSALYESTQHKT*
Ga0134080_100148974	3300010333	Grasslands Soil	MGLQIRDERQMKALTGLSQDQVDHLLPCFSALYESTQHKT*
Ga0116237_110384762	3300010356	Anaerobic Digestor Sludge	MVIKIRDERQMKALTGLSFAEFERLLPVFTAVYEAQQQRR
Ga0126372_121782751	3300010360	Tropical Forest Soil	MGLHIRDERQMKALTGLSQAQFDSLLPVFSDIYRATQQHTYEEGLQ
Ga0126377_108586393	3300010362	Tropical Forest Soil	MGLQIRDERQMKALTGLSQAQFDSLLPVFRDIYRA
Ga0126377_124850872	3300010362	Tropical Forest Soil	MGMHIRDERQMKAFTDLSPAQCNRLLPVFSDIYQATQQQTYAKGIESGTRR
Ga0126379_103143403	3300010366	Tropical Forest Soil	MGLQIRDERQMKALTGLSQAHFDSLLPVFSDIYRATQQQ
Ga0134124_121930741	3300010397	Terrestrial Soil	MGLQIRDNRQRKALTGLSQAQFDHLLPFFSDIYEATQQKTYE
Ga0124850_10661071	3300010863	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQDQFDHLLPVFSAIYQAAQQQTYEKGQ*
Ga0137392_103132151	3300011269	Vadose Zone Soil	MGMQIRDERQMKALTGLSQAQFDRLLPDFSDIYQTAQQQTYEKGVESGTRRR
Ga0137388_111453562	3300012189	Vadose Zone Soil	MEIQIRDDRQRKAFTGLSQAQCDSLLPVFSDISRATQHQKSEEGVK
Ga0137399_114201702	3300012203	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAPCDSLRSVFSDLSRATQQKTYEAGGA
Ga0137380_107764282	3300012206	Vadose Zone Soil	MGLRIRDDRQMKALTGLSQAQFDHLLPVFSDIYQATQQ
Ga0137387_107672191	3300012349	Vadose Zone Soil	MGLQIRDERQMKALTGLSQAQFAHLLPVFSDIYQTTQQQTYEKGVESGTRTRTP
Ga0137387_110148522	3300012349	Vadose Zone Soil	MGLHIRDDRQMHALTGLSQTQFDYLLLAFSDMYQVSQQKTYEEGVE
Ga0137367_106436762	3300012353	Vadose Zone Soil	MGLHIRDDRQREALTGLSQAQFDHLLPVFSDIYQATQQKTYEG*
Ga0137385_112237531	3300012359	Vadose Zone Soil	MGLQMRDDRQMKALTGLSQAPFDHLLPVFSDIYRKTQQQMYEEGVESGTRRRHP
Ga0137361_101393635	3300012362	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQDQFDHLLLVFSDIYRTTQQHTY
Ga0137361_102009563	3300012362	Vadose Zone Soil	MGLQIRDERQLKALTGLSQAHVDHLLPVFSEVYTEKQQQKY
Ga0137361_114264291	3300012362	Vadose Zone Soil	MGLQIRDERQMKALTGLSQDQFDHLLPFFSAIYETAVYE
Ga0137390_112765671	3300012363	Vadose Zone Soil	MGLQIRDERQLKALTGLSQAQVDHLLPVFSEVYTAQQQQKYEA
Ga0157341_10023041	3300012494	Arabidopsis Rhizosphere	MSSIRDERQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEEG
Ga0157326_10885052	3300012513	Arabidopsis Rhizosphere	MGIQVRDERQMKALTGLSQAQFDDLLPVFSNIYGAMLQQHYEEGVASGT
Ga0137397_107209393	3300012685	Vadose Zone Soil	MGLQIRDDRQMTVLTGLSQAQFDHLLPVFSDIYRATQQHTYEEGVQAGTRRRH
Ga0137395_101690951	3300012917	Vadose Zone Soil	MGIQVRDERQMKAFTGLSQAQFDDLLPVFSDIYGVTQQQQFPEDDQTQ*
Ga0137394_100178291	3300012922	Vadose Zone Soil	MGWQVRDDRQMKALTGLSQAQFDSLLPVFSAIYHATQ
Ga0137394_103050282	3300012922	Vadose Zone Soil	MGLQIRDGRQMKALTGLSQDQLDHLVPFFSAIYETTRQKTYTEGV
Ga0137404_110285461	3300012929	Vadose Zone Soil	MGLQMRDDRQMKALTGLSQDQFDHLLPFFSALYETTQQKTYAAGVESGTRRRKP
Ga0126375_120896011	3300012948	Tropical Forest Soil	MGLQIRDDRQMKALTGLSQDQFDHLLPSFSALYKTTQQKTYAAGVASG
Ga0164302_113037411	3300012961	Soil	VGMQIRYDRQMKALTGLSQAQFDALLPVFRDVYQATQQKTSAVGAA
Ga0126369_111620961	3300012971	Tropical Forest Soil	MGLLIRDDHQMKALTGLSQVQFDYLLPVFTDIYQAARQHT
Ga0163162_101988674	3300013306	Switchgrass Rhizosphere	MGLHIRDERQTKALTGLSQTPFDSLLPVFSDLYRATQQYTYKEGLQSD
Ga0137418_103238191	3300015241	Vadose Zone Soil	MGLHIRDDRQMKAFTGLSQAQFAHLLPVFSDIDQTT*
Ga0132258_100577141	3300015371	Arabidopsis Rhizosphere	MGLQIRDERQRTALTGLSQAQFDSLLPVFSAIYRAT
Ga0132258_100862189	3300015371	Arabidopsis Rhizosphere	MGLQIRDERQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEE
Ga0132258_105803931	3300015371	Arabidopsis Rhizosphere	MGLQIRDDRQIKALTGLSQAQFDHLLSVFSNIYWATQQKTYEGDFSVS*
Ga0132258_106588111	3300015371	Arabidopsis Rhizosphere	MGMHIRDERQMKALTGLSQVQFNRLLPVFSDIYQATQQQTYA
Ga0132258_116400392	3300015371	Arabidopsis Rhizosphere	MGLQIRDKRQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEEGLQSG
Ga0132257_1006359891	3300015373	Arabidopsis Rhizosphere	MGLQIRDERQMKALTGLSQAQFDSLLPVFSAIYRATQQQTYEEGLQSGTRRR
Ga0132257_1028554742	3300015373	Arabidopsis Rhizosphere	MRDERQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEEGLQ
Ga0132255_1006197041	3300015374	Arabidopsis Rhizosphere	MGLQIRDKRQRTALTGLSQAQFDSLLPVFSAIYRATQQQTYEEG
Ga0182032_105819822	3300016357	Soil	MGRQIRDERQMKALTGLSQAQFDSLLPVFSDIYRAAQQHAYE
Ga0182040_115541821	3300016387	Soil	MGLLIRDDRQMKALTGLSQAQFDFLLPVFSALYQATQQHT
Ga0182037_114683922	3300016404	Soil	MGLLIRDDRQMKALTGLSQVQFDHLLPVFSDIYQATQQQTYAKGVE
Ga0184619_100736343	3300018061	Groundwater Sediment	MGLQIRDERQLKALTGLSQAHVDHLLPVFSEVYTEKKQQKYV
Ga0184637_103011421	3300018063	Groundwater Sediment	MGLQIRDERQLKALTGLSQTQVDHLLPVFSEVYMEKQQQKYAAGVAAGARTRKP
Ga0184637_105630422	3300018063	Groundwater Sediment	MEIQIRDDRQMKAFTGLSQAQFDSLLPVFSDIYQATQHKKYEA
Ga0184627_100087956	3300018079	Groundwater Sediment	MGVQIRDERQLKALTGLSQAQVDHLLPVFSEVYMENQALW
Ga0184627_101487341	3300018079	Groundwater Sediment	VGLQRRDDRQMKALTGLSQAPCDPLLPLFSDLSRATQQHRNEVGVASGTRRRHP
Ga0190275_129805442	3300018432	Soil	MGLQIRDERQLKALTGLSHAEFDHLLPVFSEVYTAQQHQ
Ga0190268_106650081	3300018466	Soil	EEAKKMGLQIRDERQMKALTGLSQDQFDHLLPFFSAIYEAAQQKT
Ga0066662_103592702	3300018468	Grasslands Soil	MGLQIRDDRQMQALTGLSQAQFDHLLSVFSDVYRAT
Ga0180117_11736271	3300019248	Groundwater Sediment	MGIQVRDECQMKALTGLSQAQFDRLLPVFSDIYQTTQQQTYAQGIESGTRVRT
Ga0137408_13169443	3300019789	Vadose Zone Soil	MGLQIRNERQLKALTGLSQGQFDHLLPVFSDIYLANQQHTYEEGLESGGPKTEAGWWF
Ga0179594_100126701	3300020170	Vadose Zone Soil	MGLHIRDDRQMKALTGLSHAQFDHLLPVFNDIYQTTQQQTYEKGVVS
Ga0207684_106436191	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGLQIRDDRQMKALTGLSQAQFDQLLSVFRDLYQATQQNTYDAGVESGKVFQSC
Ga0207689_113047922	3300025942	Miscanthus Rhizosphere	MGLHIRDERQRKALTGLSQAPFDHLLPVFSDLYRATQQ
Ga0207712_102826652	3300025961	Switchgrass Rhizosphere	MGLHIRDERQRKALTGLSQAPFDHLLPVFSALYRANPATNI
Ga0207712_105241641	3300025961	Switchgrass Rhizosphere	MGLHIRDERQRKALTGLSQAPFDSLLPVFSDLYRATQQYTYKEG
Ga0209879_10066301	3300027056	Groundwater Sand	MGLQIRDDRQMKAFTGLSQAQFDHLLPIFSDIYQTTQQKTYRVVPQ
Ga0209897_10407402	3300027169	Groundwater Sand	MGLQIRDDRQMKALTGLSQDQFDHLLPFFSALYETTQQKMYAEGVESGTRR
Ga0209897_10409762	3300027169	Groundwater Sand	MGLLIRDDRQMKALTGLSQAQFDHLLPFFRDIYEATQQKTYEEEVE
Ga0209846_10187501	3300027277	Groundwater Sand	MGLQIRDDRQMKAFTGLSQAQFDHLLPIFSDIYQTTQQKTY
Ga0209842_10211041	3300027379	Groundwater Sand	MGLQIRDDRQRKAFTGLSQAQFDHLLPIFSDIDQTTQQK
Ga0209854_10388821	3300027384	Groundwater Sand	MGLQIRDDRQMKALTGLSQAQFDHLLPVFRDIYRATQQQTYEE
Ga0209854_10541331	3300027384	Groundwater Sand	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSDLYQATQQHTYDTGVA
Ga0209843_10084223	3300027511	Groundwater Sand	MGLLIRDDRQMKALTGLSQAQFDHLLPIFSDIYQTTQQKTYEDGVKSGTRRRQ
Ga0209684_10224202	3300027527	Tropical Forest Soil	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSDLYPD
Ga0209588_11486702	3300027671	Vadose Zone Soil	MGLQIRDERQMKALTGLSQAQFDHLLPVFSDIYRKTQQQMYEEGVESGTRR
Ga0209590_105963172	3300027882	Vadose Zone Soil	MGLQIRDDRQRKALTGLSQAQFDPLLSVFSAIYRATQQKTYEAGVA
Ga0209590_110650791	3300027882	Vadose Zone Soil	MGLLIRDDRQMKALTGLSHAQFDHLLPVFSDIYQATQQHTYATGVASGT
Ga0209488_105946261	3300027903	Vadose Zone Soil	MGMLIRDDRQMKALTGLSQDQFDPLLPVFSDIYQATQQ
Ga0209488_106192821	3300027903	Vadose Zone Soil	MGLQIRDDRQMKALTGLSQAQFDHLLSVFSDIYRATQQQTYEEGVEA
Ga0207428_104743911	3300027907	Populus Rhizosphere	MGLHMRDDRQMKALTGLSQAQFDHLLPVFRDIYRAT
Ga0207428_112704851	3300027907	Populus Rhizosphere	MGLHIRDDRQMQALTGLSQTQFDYLLLAFRDMYQVS
Ga0209857_10436012	3300027957	Groundwater Sand	MGLHIRDERQLKALTGLSQAQVDHLLPVFSEVYTEQQQQKYAEGVAS
Ga0268265_112697761	3300028380	Switchgrass Rhizosphere	MGLHIRDDRQMQALTGVSQTQCDSLLLAFRDMYQVSQQKTY
Ga0307312_101353482	3300028828	Soil	MGLHIRDDRQMQALTGLSQAQFDHLLSVFSDLYQATQQNTYEEGIES
Ga0268255_101675972	3300030516	Agave	MGLHIRDDRQMQALTGLSQTQFDSLLLAFRDMYQVSQQKTYEEG
Ga0268386_105061182	3300030619	Soil	MGLVIRDDRQMKALTGLSQAQFDQLLPVFESTYQATQQQAYDPNFARL
Ga0308197_100356762	3300031093	Soil	MGRHIRDDRQMKAFTGLSQAQLDHLLPVFSDIYEATQQKAYEK
Ga0308187_102650421	3300031114	Soil	MGMLIRDDRQMKALTGLSQAQFAHLLPVFSEIYQITQQQTYEKGVEAGTRRRK
Ga0308179_10037931	3300031424	Soil	MGRHIRDDRQMKAFTGLSQAQLDHLLPVFSDIYEATQQKAYEKGVESGTRTREPG
Ga0318561_103325091	3300031679	Soil	MGIPVRDERHMKALTGLSQAQFDDLLSAFSDIYGAT
Ga0307469_102708892	3300031720	Hardwood Forest Soil	MGIQVRDERHMKALTGLSQAQFDDLLPAFSDLYGA
Ga0307468_1001143491	3300031740	Hardwood Forest Soil	MGMQIRDDRQMKALTGLSQAQFDHLLPVFNDLYQAIQH
Ga0307468_1010540291	3300031740	Hardwood Forest Soil	MGMQIRDERQMKALTGLSQAQFDRLLPVFSDIYQTTQQQTYEQGIESGTRVRT
Ga0306918_114042982	3300031744	Soil	MGLQIRDDRQMKALTGLSQVQFDYLLPYFSTIYASTQQKTYVEGVAA
Ga0306923_101849263	3300031910	Soil	MGRQIRDERQMKALTGLSQAQFDSLLPVFRDIYRATQQQTYEAGLQSGTR
Ga0310912_105385231	3300031941	Soil	MGIPVRDERHMKALTGLSQAQFDDLLSAFSDIYGATQRRHDEEGV
Ga0310909_112900261	3300031947	Soil	MGIHVRDERHMQALTGLSQAQFDDLWSAFSDLDGAT
Ga0306926_107659581	3300031954	Soil	MGLQIRDERQRKALTGLSQAQFDSLLPVFSDIYRAAQQQRYE
Ga0307471_1038618142	3300032180	Hardwood Forest Soil	MGLHIRDDRQMQALTGLSQTQFDYLLLAFRDMYQVSQQKTYEEG
Ga0335082_106654342	3300032782	Soil	MGLHSRDDRQMKAVPGLSPAQCDPLLSVFSDVDQTMQ
Ga0370548_015311_1002_1109	3300034644	Soil	MRDERQMKALTGLSQAQFDYLLPVFSDIYQATQQKT
Ga0314797_038967_3_164	3300034672	Soil	MGLLIRDDRQMKALTGLSQAQFDHLLPVFSAIYQAAQQQTYEKGVESGTRWRKP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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