Metagenome / Metatranscriptome Family F041065

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041065
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	54 residues
Representative Sequence	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH
Number of Associated Samples	131
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.53 %
% of genes near scaffold ends (potentially truncated)	30.62 %
% of genes from short scaffolds (< 2000 bps)	83.12 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (23.125 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.875 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.96% β-sheet: 0.00% Coil/Unstructured: 37.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF11752	DUF3309	7.50
PF00072	Response_reg	3.75
PF01464	SLT	3.12
PF05494	MlaC	1.88
PF12698	ABC2_membrane_3	1.88
PF00202	Aminotran_3	1.25
PF06723	MreB_Mbl	1.25
PF07171	MlrC_C	1.25
PF00027	cNMP_binding	1.25
PF00078	RVT_1	1.25
PF05239	PRC	1.25
PF05368	NmrA	1.25
PF02569	Pantoate_ligase	0.62
PF10431	ClpB_D2-small	0.62
PF07690	MFS_1	0.62
PF02518	HATPase_c	0.62
PF13751	DDE_Tnp_1_6	0.62
PF02310	B12-binding	0.62
PF06048	DUF927	0.62
PF07969	Amidohydro_3	0.62
PF13581	HATPase_c_2	0.62
PF04280	Tim44	0.62
PF04972	BON	0.62
PF13701	DDE_Tnp_1_4	0.62
PF13545	HTH_Crp_2	0.62
PF12127	FloA	0.62
PF13488	Gly-zipper_Omp	0.62
PF13474	SnoaL_3	0.62
PF05378	Hydant_A_N	0.62
PF04392	ABC_sub_bind	0.62
PF06210	DUF1003	0.62
PF11008	DUF2846	0.62
PF13091	PLDc_2	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.88
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.25
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	1.25
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	1.25
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	0.62
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.62
COG4395	Predicted lipid-binding transport protein, Tim44 family	Lipid transport and metabolism [I]	0.62
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.62
COG5519	Predicted ATPase domain of Cch-like helicases, DUF927 family	General function prediction only [R]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.25 %
Unclassified	root	N/A	3.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.25 %
Unclassified	root	N/A	3.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.25 %
Unclassified	root	N/A	3.75 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	54.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.50 %
Unclassified	root	N/A	3.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	54.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.62 %
Unclassified	root	N/A	3.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	53.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.62 %
Unclassified	root	N/A	3.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	49.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.62 %
Unclassified	root	N/A	3.75 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.62 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	49.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.62 %
Unclassified	root	N/A	3.75 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	49.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.62 %
Unclassified	root	N/A	3.75 %
Variovorax beijingensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax beijingensis	1.88 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101150416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1011721	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	958	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1019409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1040727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300002561\|JGI25384J37096_10031047	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300002908\|JGI25382J43887_10120039	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300002908\|JGI25382J43887_10473974	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300003987\|Ga0055471_10234420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	579	Open in IMG/M
3300004157\|Ga0062590_100680317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300004480\|Ga0062592_101372602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	671	Open in IMG/M
3300005093\|Ga0062594_101943535	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	626	Open in IMG/M
3300005167\|Ga0066672_10080895	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300005172\|Ga0066683_10106116	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1707	Open in IMG/M
3300005179\|Ga0066684_10041580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2583	Open in IMG/M
3300005180\|Ga0066685_10220920	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1303	Open in IMG/M
3300005289\|Ga0065704_10010613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1781	Open in IMG/M
3300005294\|Ga0065705_10145614	All Organisms → cellular organisms → Bacteria → Proteobacteria	2048	Open in IMG/M
3300005294\|Ga0065705_10699088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300005295\|Ga0065707_11167045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300005336\|Ga0070680_101536461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005336\|Ga0070680_101695981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300005339\|Ga0070660_100699267	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	850	Open in IMG/M
3300005356\|Ga0070674_100938749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax beijingensis	756	Open in IMG/M
3300005438\|Ga0070701_11031430	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300005440\|Ga0070705_101303434	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005444\|Ga0070694_100035985	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3277	Open in IMG/M
3300005446\|Ga0066686_10056927	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300005447\|Ga0066689_11016666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300005468\|Ga0070707_100302800	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300005518\|Ga0070699_100770016	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005530\|Ga0070679_101688641	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300005545\|Ga0070695_101485070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300005549\|Ga0070704_101200969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax beijingensis	692	Open in IMG/M
3300005552\|Ga0066701_10650768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300005561\|Ga0066699_10185510	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441	Open in IMG/M
3300005564\|Ga0070664_101368309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300005569\|Ga0066705_10086335	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300005844\|Ga0068862_101229848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	748	Open in IMG/M
3300006049\|Ga0075417_10012620	All Organisms → cellular organisms → Bacteria	3187	Open in IMG/M
3300006049\|Ga0075417_10196884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	953	Open in IMG/M
3300006049\|Ga0075417_10350177	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300006049\|Ga0075417_10564730	Not Available	576	Open in IMG/M
3300006058\|Ga0075432_10015272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2618	Open in IMG/M
3300006844\|Ga0075428_101313358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	761	Open in IMG/M
3300006845\|Ga0075421_100978607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	959	Open in IMG/M
3300006847\|Ga0075431_100740483	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	959	Open in IMG/M
3300006847\|Ga0075431_102053448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300006852\|Ga0075433_10148135	All Organisms → cellular organisms → Bacteria	2087	Open in IMG/M
3300006852\|Ga0075433_10265499	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300006852\|Ga0075433_10273650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1496	Open in IMG/M
3300006852\|Ga0075433_10750581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	854	Open in IMG/M
3300006854\|Ga0075425_100479783	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300006854\|Ga0075425_100591365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300006854\|Ga0075425_100593254	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300006871\|Ga0075434_100480565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1263	Open in IMG/M
3300006871\|Ga0075434_100617703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1103	Open in IMG/M
3300006881\|Ga0068865_100441369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1074	Open in IMG/M
3300006903\|Ga0075426_11321276	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006904\|Ga0075424_100410429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1444	Open in IMG/M
3300007004\|Ga0079218_13057231	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300009081\|Ga0105098_10225707	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300009094\|Ga0111539_12423181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300009100\|Ga0075418_10099988	All Organisms → cellular organisms → Bacteria	3081	Open in IMG/M
3300009100\|Ga0075418_10115020	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2857	Open in IMG/M
3300009143\|Ga0099792_11189942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300009147\|Ga0114129_11927919	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300009156\|Ga0111538_11506164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	848	Open in IMG/M
3300009162\|Ga0075423_11594132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	702	Open in IMG/M
3300009177\|Ga0105248_11732752	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	708	Open in IMG/M
3300009545\|Ga0105237_11628419	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	652	Open in IMG/M
3300009610\|Ga0105340_1030530	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300009799\|Ga0105075_1042125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300009811\|Ga0105084_1022097	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300009816\|Ga0105076_1026980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1006	Open in IMG/M
3300009821\|Ga0105064_1045837	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	837	Open in IMG/M
3300009836\|Ga0105068_1029871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300009837\|Ga0105058_1108231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	656	Open in IMG/M
3300010029\|Ga0105074_1015465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1235	Open in IMG/M
3300010335\|Ga0134063_10180456	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	988	Open in IMG/M
3300010335\|Ga0134063_10695552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	525	Open in IMG/M
3300010336\|Ga0134071_10092083	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1432	Open in IMG/M
3300010400\|Ga0134122_11391167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300012204\|Ga0137374_11080623	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300012358\|Ga0137368_10114532	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300012361\|Ga0137360_10502345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300012582\|Ga0137358_10244341	Not Available	1222	Open in IMG/M
3300012582\|Ga0137358_10981889	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012922\|Ga0137394_10456549	Not Available	1087	Open in IMG/M
3300012958\|Ga0164299_11680982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300012960\|Ga0164301_10137293	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300012976\|Ga0134076_10280371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300015053\|Ga0137405_1292476	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300015371\|Ga0132258_10252582	All Organisms → cellular organisms → Bacteria	4311	Open in IMG/M
3300015373\|Ga0132257_100432565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1604	Open in IMG/M
3300015374\|Ga0132255_100147670	All Organisms → cellular organisms → Bacteria → Proteobacteria	3273	Open in IMG/M
3300018028\|Ga0184608_10047467	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1681	Open in IMG/M
3300018052\|Ga0184638_1277999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300018431\|Ga0066655_10112196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300018433\|Ga0066667_10015896	All Organisms → cellular organisms → Bacteria → Acidobacteria	3827	Open in IMG/M
3300018468\|Ga0066662_10145773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1780	Open in IMG/M
3300019254\|Ga0184641_1217771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300019362\|Ga0173479_10698759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300020004\|Ga0193755_1042214	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300025910\|Ga0207684_11320236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300025917\|Ga0207660_11475158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300025918\|Ga0207662_10847246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300025935\|Ga0207709_10837082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	745	Open in IMG/M
3300025940\|Ga0207691_11747801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300025972\|Ga0207668_11972499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300026075\|Ga0207708_11755226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300026089\|Ga0207648_10701437	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	938	Open in IMG/M
3300026297\|Ga0209237_1019877	All Organisms → cellular organisms → Bacteria	3844	Open in IMG/M
3300026300\|Ga0209027_1222238	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300026309\|Ga0209055_1018932	All Organisms → cellular organisms → Bacteria	3349	Open in IMG/M
3300026315\|Ga0209686_1224494	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300026334\|Ga0209377_1072425	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1479	Open in IMG/M
3300026535\|Ga0256867_10294629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300026550\|Ga0209474_10374921	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300026552\|Ga0209577_10085393	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
3300027490\|Ga0209899_1049547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	872	Open in IMG/M
3300027577\|Ga0209874_1055561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1016	Open in IMG/M
3300027821\|Ga0209811_10011741	All Organisms → cellular organisms → Bacteria	2817	Open in IMG/M
3300027873\|Ga0209814_10052359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1704	Open in IMG/M
3300027873\|Ga0209814_10069901	Not Available	1475	Open in IMG/M
3300027880\|Ga0209481_10005760	All Organisms → cellular organisms → Bacteria	5254	Open in IMG/M
3300027903\|Ga0209488_10242028	Not Available	1353	Open in IMG/M
3300027907\|Ga0207428_10003311	All Organisms → cellular organisms → Bacteria	15669	Open in IMG/M
3300027909\|Ga0209382_10508325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1326	Open in IMG/M
3300028145\|Ga0247663_1082629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300028380\|Ga0268265_10082753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2539	Open in IMG/M
3300028380\|Ga0268265_11542367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300028592\|Ga0247822_11628325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300028792\|Ga0307504_10353040	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300030006\|Ga0299907_10267828	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1400	Open in IMG/M
3300030619\|Ga0268386_10095772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2300	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1019984	All Organisms → cellular organisms → Bacteria → Proteobacteria	1377	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10150647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031228\|Ga0299914_10002603	All Organisms → cellular organisms → Bacteria → Proteobacteria	12491	Open in IMG/M
3300031538\|Ga0310888_10190488	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1121	Open in IMG/M
3300031716\|Ga0310813_11391188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300031720\|Ga0307469_10035876	All Organisms → cellular organisms → Bacteria → Proteobacteria	2947	Open in IMG/M
3300031720\|Ga0307469_10267890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax beijingensis	1387	Open in IMG/M
3300031720\|Ga0307469_10274667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1372	Open in IMG/M
3300031720\|Ga0307469_10544360	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1027	Open in IMG/M
3300031720\|Ga0307469_11367598	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	674	Open in IMG/M
3300031740\|Ga0307468_100197394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1356	Open in IMG/M
3300031740\|Ga0307468_100813729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	798	Open in IMG/M
3300031740\|Ga0307468_101179786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300031740\|Ga0307468_101760076	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300031820\|Ga0307473_10186299	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300031908\|Ga0310900_10780408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	771	Open in IMG/M
3300031913\|Ga0310891_10270885	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300031944\|Ga0310884_10050091	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300032003\|Ga0310897_10338234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300032174\|Ga0307470_10051819	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300032180\|Ga0307471_100438571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1443	Open in IMG/M
3300032205\|Ga0307472_101647478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300032205\|Ga0307472_101859626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300033551\|Ga0247830_10934596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.38%
Host-Associated	Host-Associated	30.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.62%
Plants	Host-Associated → Plants	30.63%
Aquatic	Environmental → Aquatic	3.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.62%
Sediment	Environmental → Aquatic → Sediment	1.88%
Freshwater	Environmental → Aquatic → Freshwater	1.25%
Marine	Environmental → Aquatic → Marine	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.88%
Loam	Environmental → Terrestrial → Soil → Loam	11.88%
Sand	Environmental → Terrestrial → Soil → Sand	6.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.25%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.62%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.62%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.62%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.25%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.62%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1011504162	3300000559	Soil	MIQALFSRVSSFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSNH*
KanNP_Total_noBrdU_T14TCDRAFT_10117211	3300000596	Soil	MIQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHQKDQQKSKH*
KanNP_Total_noBrdU_T14TCDRAFT_10194091	3300000596	Soil	MIQALFSRVSVFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH*
KanNP_Total_noBrdU_T14TCDRAFT_10407271	3300000596	Soil	SAMLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKN*
JGI25384J37096_100310472	3300002561	Grasslands Soil	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKMDQQKGTSTSSTGGA
JGI25382J43887_101200392	3300002908	Grasslands Soil	MMQALFSRVSFFRQRAVALFHRTDQLKADSVERRERWNQVIAEHKKDQQKSKQ*
JGI25382J43887_104739741	3300002908	Grasslands Soil	MIQALFSRVSFFRQRAVALFYRADQLKADYGERRERWNQVIAEHKMDQQKGTS
Ga0055471_102344201	3300003987	Natural And Restored Wetlands	MMQVLLSPVSFLRQRMSMLLHRKDRPKADAAERRERWNRVIAEHQKPLDQPPGPSTPSAGGA*
Ga0062590_1006803172	3300004157	Soil	MLQALFSRVSLFRQRAVALFHRTDQLKTDSAERRERWNQVIAEHKKDQQKIKH*
Ga0062592_1013726021	3300004480	Soil	MIQALLSRVSSFRQRAVARFHRTDQLKADSAERRERWSQVIAEHKKDQQK
Ga0062594_1019435352	3300005093	Soil	TAVSMRSAMIQALLSRVSSFRQRAVARFHRTDQLKADSAERRERWSQVIAEHKKDQQKSKP*
Ga0066672_100808954	3300005167	Soil	MIQALFSRVSFFRQRAVALFHRTNQLKADSVERRERWNQVIAEHKKDQQKSKQ*
Ga0066683_101061162	3300005172	Soil	MIQALFSRVSFFRQRAVALFYRADQLKADYGERRERWNQVIAEHKMDQQKGTSTSSAGGA
Ga0066684_100415801	3300005179	Soil	MLKALLSRVSFLRQRALALAHRTDQLKADSAERRERWNQVIAEHQK
Ga0066685_102209203	3300005180	Soil	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKIKN*
Ga0065704_100106132	3300005289	Switchgrass Rhizosphere	MMQALFSRVSLFRQRARALFHRTDQLKADSXERRERWNQVIAEHKXDQQKSKH*
Ga0065705_101456144	3300005294	Switchgrass Rhizosphere	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH*
Ga0065705_106990881	3300005294	Switchgrass Rhizosphere	MMQALFSRVSLFRQRARALFHRTDQLKADTAERRERWNQVIAEHKKDQQKSKH*
Ga0065707_111670451	3300005295	Switchgrass Rhizosphere	MMQALFSRVSFFRQRALALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSK
Ga0070680_1015364612	3300005336	Corn Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKIKH*
Ga0070680_1016959811	3300005336	Corn Rhizosphere	MIQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVINEHKKDQQKSTH*
Ga0070660_1006992671	3300005339	Corn Rhizosphere	MLQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH*
Ga0070674_1009387491	3300005356	Miscanthus Rhizosphere	AMIQALFSRVSAFRQRAVALFHRTDQLKADSAERRERWNQVINEHKKDQQKSTH*
Ga0070701_110314302	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKTDSAERRERWNQVIAEHKKDQQKSKH*
Ga0070705_1013034342	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLKELLSRVSFLRHRALTLTHRKDQLKADSAERRDRWNQVIAEHQ
Ga0070694_1000359852	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIQALFSRVSAFRQRAVALFHRTDQLKADSAERRERWNQVINEHKKDQQKSTH*
Ga0066686_100569272	3300005446	Soil	MIQALFSRVSFFRQRAVALFYRADQLKADYGERRERWNQVIAEHKMDQQKSTSTSSAGGA
Ga0066689_110166662	3300005447	Soil	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKN*
Ga0070707_1003028002	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIQALFSRVSFFRQRAVALFHRTDQLKADSVERRERWNQVIAEHKKDQQKSKQ*
Ga0070699_1007700162	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIQALFSRVSFFRQRAVALFHRTDQLKADSVERRERWNQVIAEHKKD
Ga0070679_1016886411	3300005530	Corn Rhizosphere	MIQALLSRVSSFRQRAVARFHRTDQLKADSAERRERWSQVIAEHKKDQQKSKP*
Ga0070695_1014850701	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQVKADSAERRERWNQVIAEHKKDQQK
Ga0070704_1012009691	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RSAMIQALFSRVSAFRQRAVALFHRTDQLKADSAERRERWNQVINEHKKDQQKSTH*
Ga0066701_106507681	3300005552	Soil	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKMDQQKGTSTSSAGGA
Ga0066699_101855101	3300005561	Soil	AASTRSAMIQALFSRVSFFRQRAVALFHRTNQLKADSVERRERWNQVIAEHKKDQQKSKQ
Ga0070664_1013683092	3300005564	Corn Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQPGKH*
Ga0066705_100863351	3300005569	Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKP
Ga0068862_1012298483	3300005844	Switchgrass Rhizosphere	MIQALFSRVSAFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH*
Ga0075417_100126204	3300006049	Populus Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIADHKKDQQPSKP*
Ga0075417_101968843	3300006049	Populus Rhizosphere	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQQSKN*
Ga0075417_103501771	3300006049	Populus Rhizosphere	RSAMLQALFSRVSLFRQRAVALLHRTDQLKADSAERRERWNQVIAEHKKDQQPSKP*
Ga0075417_105647302	3300006049	Populus Rhizosphere	LSPVSFLRSRVSTLLHRNDRLKAAAAERRERWNQVIAEHKNPALDRHREDGGEA*
Ga0075432_100152724	3300006058	Populus Rhizosphere	MLQALFSRVSLFRRRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQPSKP*
Ga0075428_1013133582	3300006844	Populus Rhizosphere	MLQALFSRVSFFRQRAVALFHRTDQLKADSTERRERWNQVIAEHKKDQQKSKN*
Ga0075421_1009786071	3300006845	Populus Rhizosphere	MLQALLSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQPSKP*
Ga0075431_1007404831	3300006847	Populus Rhizosphere	MMHALLSPVSFLRSRVSTLLHRNDRLKAAAAERRERWNQVIAEHKNPALDRHREDGGEA*
Ga0075431_1020534481	3300006847	Populus Rhizosphere	MLQALLSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKD
Ga0075433_101481352	3300006852	Populus Rhizosphere	MMQALFSRVSLFRERARALFHRTNQLKADSAERRERWNQVIAEHKKDQQKSKQ*
Ga0075433_102654991	3300006852	Populus Rhizosphere	MIQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKQ*
Ga0075433_102736503	3300006852	Populus Rhizosphere	MIQALFSRVSAFRQRAVALFHRTDQLKADSAERRERWNQVINEHKKDQHKSTH*
Ga0075433_107505812	3300006852	Populus Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQPSKH*
Ga0075425_1004797831	3300006854	Populus Rhizosphere	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSNH*
Ga0075425_1005913651	3300006854	Populus Rhizosphere	MLQALFSRVSLFRRRAVALFHRTDQLKADSAERRERWNQVIAEHKDQQKSKH*
Ga0075425_1005932541	3300006854	Populus Rhizosphere	MMQALFSRVSLFRERARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKQ*
Ga0075434_1004805652	3300006871	Populus Rhizosphere	MLQALFSRVSLFRQRAAALFHRTDQLKADSAERRERWNQVISEHKKDQQKSKPV*
Ga0075434_1006177031	3300006871	Populus Rhizosphere	TRSAMLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSNH*
Ga0068865_1004413692	3300006881	Miscanthus Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH*
Ga0075426_113212761	3300006903	Populus Rhizosphere	MLKALLSRVSFFRQRALALSQRKDQLQADSAERRERWNRVIADHQKPLDQPKG
Ga0075424_1004104293	3300006904	Populus Rhizosphere	MLQALFTRVSLFRQRAAALFHRTDQLKADSAERRERWNQVISEHKKDQQKSKPV*
Ga0075424_1008009651	3300006904	Populus Rhizosphere	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAE
Ga0079218_130572311	3300007004	Agricultural Soil	MKALLSCVSTIRQRALALLHRRDQVKVDAAQRRERWSEVIAEHQKPPKAAGKP*
Ga0105098_102257073	3300009081	Freshwater Sediment	MQAFSSPMSFLRQRVSTLLHRKDQLKANAAERRERWNQVIAEHQKPLDQHPAPSTSSTGGV*
Ga0111539_124231811	3300009094	Populus Rhizosphere	TNASTRSAMMQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH*
Ga0075418_100999884	3300009100	Populus Rhizosphere	MLQALLSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIADHKKDQQPSKP*
Ga0075418_101150205	3300009100	Populus Rhizosphere	MIQALFFRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH*
Ga0099792_111899421	3300009143	Vadose Zone Soil	VIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKQ*
Ga0114129_119279191	3300009147	Populus Rhizosphere	RSAMLQALFSRVSFFRQRAVALFHRTDQLKADSTERRERWNQVIAEHKKDQQKSKN*
Ga0111538_115061642	3300009156	Populus Rhizosphere	MIQALFSRVSLFRQRARALFHRTDQLKADTAERRERWNQVIAEHKKDQQKSKH*
Ga0075423_115941322	3300009162	Populus Rhizosphere	MLQALLSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQ
Ga0105248_117327522	3300009177	Switchgrass Rhizosphere	AMLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQPGKH*
Ga0105237_116284191	3300009545	Corn Rhizosphere	MMQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQK
Ga0105340_10305301	3300009610	Soil	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRDRWNQVIAEHKKDQQKSKH*
Ga0105075_10421251	3300009799	Groundwater Sand	MMQALFSRVSFFRQRAVALLHRNDQLKTHSAERRERWNQVIAEYQKPDQQKGTSTSSTRQA*
Ga0105084_10220971	3300009811	Groundwater Sand	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKVDQQKGTSRSSTGGA
Ga0105076_10269801	3300009816	Groundwater Sand	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKMDQQKGSSTSSTGGA
Ga0105064_10458371	3300009821	Groundwater Sand	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKTDQQKGTSRSSTGGA
Ga0105068_10298711	3300009836	Groundwater Sand	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHQKDQQKSKH*
Ga0105058_11082311	3300009837	Groundwater Sand	MMQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKQ*
Ga0105074_10154651	3300010029	Groundwater Sand	MLQAVFSRLSFFRERAVALFHRTDQLKADSAERRDRWNQVIAEHKTDQQKGTSRSSTGGA
Ga0134063_101804562	3300010335	Grasslands Soil	MLKALLSRVSFLRQRALALAHRTDQLKADSAERRERWNQVIAEHQKPLD
Ga0134063_106955522	3300010335	Grasslands Soil	MRPITMKALLSYVSFRQRAFALFHRTDQLKANSDERRERWNQVIAEHQKPLE
Ga0134071_100920831	3300010336	Grasslands Soil	MIQALFSRVSFFRQRAVALFHSTDQLKADSVERRERWNQVIAEHKMDQQKGTSTSSAGGA
Ga0134122_113911672	3300010400	Terrestrial Soil	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQPSKP*
Ga0137374_110806232	3300012204	Vadose Zone Soil	MIQALFSRVSSFRQRTVALFHRNDQLKADSAERRERWNQVIAEHQKPLDQQKSTSTSSTGGA*
Ga0137368_101145322	3300012358	Vadose Zone Soil	MIQALFSRVSSFRQRTVALFHRNDQLKADSAERRERWNKVIAEHQKPLDQQKSTSTSSTGGA*
Ga0137360_105023452	3300012361	Vadose Zone Soil	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKP*
Ga0137358_102443411	3300012582	Vadose Zone Soil	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKGQHEGGSTSPTGEA
Ga0137358_109818892	3300012582	Vadose Zone Soil	MLKALLSRVSFFRQRALTLSHGNDQLKADAAERRDRWNEVIAEHQK
Ga0137394_104565492	3300012922	Vadose Zone Soil	MLKALLSRVSFFRQRALALSQRKDQLQADSAERRERWNQVIADHQKPLDQPKGTSTPPR*
Ga0164299_116809822	3300012958	Soil	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRDRWNQVIAEHKKDQQKGKH*
Ga0164301_101372932	3300012960	Soil	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRDRWNQVIAEHKKDQQKSKH*
Ga0134076_102803711	3300012976	Grasslands Soil	MIRALFSQVSRFHQRTLARFHRTDQLKADSVERRERWNQVIAEHKKDQQKSKQ*
Ga0137405_12924762	3300015053	Vadose Zone Soil	MLKALLSRVPFFRQRASALSHRDDQLKADSAERRRGWNQVIAEHQK
Ga0132258_102525827	3300015371	Arabidopsis Rhizosphere	MIQALFSRVSALRQRAVALFHRTDQLTADSAERRERWNQVINEHKKDQQKSTH*
Ga0132257_1004325651	3300015373	Arabidopsis Rhizosphere	TRSATIQALFSRVSLFRQRARALFHRTDQLKADTAERRERWNQVIAEHKKDQQKSKH*
Ga0132255_1001476704	3300015374	Arabidopsis Rhizosphere	MIQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKTKH*
Ga0184608_100474671	3300018028	Groundwater Sediment	MLKALLSRVSFLRQRALALFHRTDQLKADSAERRERWNQVIAEHKKDQ
Ga0184638_12779992	3300018052	Groundwater Sediment	MLKALLSRVTFLHQRALALFHRTDQLKADSAERRERWNQVIAEHKKDQ
Ga0066655_101121963	3300018431	Grasslands Soil	MIQALFSRVSFFRQRAVALFHRTDQLKADSVERRERWNQVIAEHKKDQQKSKQ
Ga0066667_100158963	3300018433	Grasslands Soil	MLKALLSRVSFLRQRALALAHRTDQLKADSAERRERWNQVIAEHQKPLDPPKDKSTR
Ga0066662_101457732	3300018468	Grasslands Soil	MMQALFSRVSFFRQRAVALFHRTDQLKADSVERRERWNQVIAEHKKDQQKSKQ
Ga0184641_12177712	3300019254	Groundwater Sediment	MMHALLSPVSFLRSRVSTLLHRNDRLKAAAAERRERWNQVIAEHKNPALDPHREDGGQA
Ga0173479_106987592	3300019362	Soil	MLQALFSRVSLFRQRAVALFHRTDQLKTDSAERRERWNQVIAEH
Ga0193755_10422143	3300020004	Soil	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVITEHKKGQNKGGSTSSTGEA
Ga0207684_113202362	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLQALFCRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKN
Ga0207660_114751582	3300025917	Corn Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKIKH
Ga0207662_108472462	3300025918	Switchgrass Rhizosphere	MIQALLSRVSSFRQRAVARFHRTDQLKADSAERRERWSQVIAEHKKDQQKSKH
Ga0207709_108370821	3300025935	Miscanthus Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKTDSAERRERWNQVIAEHKKDQQK
Ga0207691_117478011	3300025940	Miscanthus Rhizosphere	MIQALFSRVSLFRQRAVALFHRTDPLKADSAERRERWNQVIAEHKKDQQKSKH
Ga0207668_119724991	3300025972	Switchgrass Rhizosphere	MIQALFSRVSAFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH
Ga0207708_117552261	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MIQALLSRVSSFRQRAVARFHRTDQLKADSAERRERWSQVIAEHKKDQQKSKP
Ga0207648_107014372	3300026089	Miscanthus Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH
Ga0209237_10198772	3300026297	Grasslands Soil	MLKALLSRVSFFRQRALALSQRKDQLQADSAERRERWNQVIADHQKPLDQPKGPSTPPR
Ga0209027_12222381	3300026300	Grasslands Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNDVIAEHQKPQVAR
Ga0209055_10189323	3300026309	Soil	MIQALFSRVSFFRQRAVALFHRTNQLKADSVERRERWNQVIAEHKKDQQKSKQ
Ga0209686_12244942	3300026315	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNQVIAEHKKDQQKIKN
Ga0209377_10724253	3300026334	Soil	MLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQ
Ga0256867_102946291	3300026535	Soil	MMQALFSPVSFLRQRVSTLLHRKDQLKANAAERRERWNQVIAEHKKPLDQHPAPSTSSPGGA
Ga0209474_103749211	3300026550	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQK
Ga0209577_100853933	3300026552	Soil	MIQALFSRVSFFRQRAVALFHRTNQLKADSVEWRERWNQVIAEHKKDQQKSKQ
Ga0209899_10495471	3300027490	Groundwater Sand	MIQALLSRVSFFRQRAVALFHRTDQLKADSVERRERWNQVIAEHKTDQQKGTSRSSTGGA
Ga0209874_10555612	3300027577	Groundwater Sand	MMQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKQ
Ga0209811_100117412	3300027821	Surface Soil	MLQALFSRVSLFRQRAVALFHRTDPLKADSAERRERWNQVIAEHKKDQQKGKH
Ga0209814_100523591	3300027873	Populus Rhizosphere	MIQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKQ
Ga0209814_100699014	3300027873	Populus Rhizosphere	MIRALFSSASSFRQRVLPLFHRNDQLKADSAERRERWKQVIAEHQKPLDQQKGTSTSSAGGP
Ga0209481_100057603	3300027880	Populus Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQPSKP
Ga0209488_102420283	3300027903	Vadose Zone Soil	VIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKQ
Ga0207428_1000331119	3300027907	Populus Rhizosphere	MLQALFSRVSLFRRRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQPSKP
Ga0209382_105083253	3300027909	Populus Rhizosphere	MMHALLSPVSFLRSRVSTLLHRNDRLKAAAAERRERWNQVIAEHKNPALDRHREDGGEA
Ga0247663_10826291	3300028145	Soil	MLQALFSRISLFRQRALALFHRTDPLKADSAERRERWNQVIAEHKKDQQPGKH
Ga0268265_100827535	3300028380	Switchgrass Rhizosphere	MLQALFSRVSLFRQRAVALFHRTDQLKTDSAERRERWNQVIAEHKKDQQKIKH
Ga0268265_115423671	3300028380	Switchgrass Rhizosphere	IQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH
Ga0247822_116283252	3300028592	Soil	MMHALLSPVSFLRSRVSTLFHRNDRLKAAAAERRERWNQVIAEHKNPALDRHREDGGGGL
Ga0307504_103530401	3300028792	Soil	MIQALFSRVSLFRQRAGALFHRTDQLKADSAERRERWNQVIAEHKKDQQKTNTDR
Ga0299907_102678281	3300030006	Soil	MMQALFSPVSFLRQRVSTLLHRKDQLKANAAERRERWNQVIAEHKKPLDQHPAPST
Ga0268386_100957724	3300030619	Soil	FSPVSFLRQRVSTLLHRKDRLKANAAERRERWNRVIAEHQKPMDQQPGPSTSSTGRV
(restricted) Ga0255311_10199841	3300031150	Sandy Soil	VSLFRQRAGALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH
(restricted) Ga0255310_101506471	3300031197	Sandy Soil	PAASTRSAMIQALFSRVSLFRQRAGALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSK
Ga0299914_1000260312	3300031228	Soil	MMHAFFSRVSFLRQRVSTLLHRKDQLKADAAERRERWNRVIAEHQKPMDQQPDSSSSTGR
Ga0310888_101904884	3300031538	Soil	MLQALLSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIADHKKDQQPS
Ga0310813_113911882	3300031716	Soil	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRDRWNQVIAEHKKGQQKSKH
Ga0307469_100358763	3300031720	Hardwood Forest Soil	MMQALFSRVSLFRQRARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH
Ga0307469_102678901	3300031720	Hardwood Forest Soil	MIQALFSRVSAFRQRAVALFHRTDQLKADSAERRERWNQVINEHKKDQQKSTH
Ga0307469_102746673	3300031720	Hardwood Forest Soil	MLQALFSRVSIFRQRAVALFHRTDQLKADSAERRDRWNQVIAEHKKDQQK
Ga0307469_105443602	3300031720	Hardwood Forest Soil	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKN
Ga0307469_113675982	3300031720	Hardwood Forest Soil	MLQALFSRVSLFRQRAVALFHRTGQLKTDSAERRERWNQVIAEHKKDQQPSKP
Ga0307468_1001973942	3300031740	Hardwood Forest Soil	MMQALFSRVSLFRQRARALFHRTDQLKADTAERRERWNQVIAEHKKDQQKSKH
Ga0307468_1008137291	3300031740	Hardwood Forest Soil	MLQALFSRVSIFRQRAVALFHRTDQLKADSVERRERWNQVIAEHKKDQQKITR
Ga0307468_1011797862	3300031740	Hardwood Forest Soil	MLQALFSRVSLFRQRAVALFHRTDQLKTDSAERRERWNQVIAEHKKDQQPSKP
Ga0307468_1017600761	3300031740	Hardwood Forest Soil	MMQALFSRVSLLRERARALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKQ
Ga0307473_101862993	3300031820	Hardwood Forest Soil	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIADHKKDQQKSKH
Ga0310900_107804081	3300031908	Soil	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIADHKKD
Ga0310891_102708852	3300031913	Soil	MLQALLSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIADHKKDQQPSKP
Ga0310884_100500912	3300031944	Soil	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRDRWNQVIAEHKKDQQKGKH
Ga0310897_103382341	3300032003	Soil	QTAASARSAMLQALLSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIADHKKDQQPSKP
Ga0307470_100518191	3300032174	Hardwood Forest Soil	MLQALFSRVSIFRQRAVALFHRTDQLKADSAERRDRWNQVIAEHKKDQQKSKH
Ga0307471_1004385713	3300032180	Hardwood Forest Soil	RSAMLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKKDQQKSKH
Ga0307472_1016474781	3300032205	Hardwood Forest Soil	MLQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNQVSNEHKKDQ
Ga0307472_1018596262	3300032205	Hardwood Forest Soil	MLQALFSRVSLFRQRAVALFHRTDQLKADSAERRERWNQVIAEHKRDQQKSKH
Ga0247830_109345962	3300033551	Soil	MMHALLSPVSFLRSRVSTLLHRNDRLKAAAAERRERWNQVIAEHKNPALDRHREDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters