Metagenome / Metatranscriptome Family F040991

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040991
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	46 residues
Representative Sequence	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGAL
Number of Associated Samples	101
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.62 %
% of genes near scaffold ends (potentially truncated)	95.00 %
% of genes from short scaffolds (< 2000 bps)	91.88 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.125 % of family members)
Environment Ontology (ENVO)	Unclassified (62.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.125 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF03773	ArsP_1	6.25
PF13460	NAD_binding_10	3.12
PF04679	DNA_ligase_A_C	2.50
PF11154	DUF2934	1.88
PF02776	TPP_enzyme_N	1.88
PF00210	Ferritin	1.25
PF01638	HxlR	1.25
PF07992	Pyr_redox_2	1.25
PF07859	Abhydrolase_3	1.25
PF06426	SATase_N	1.25
PF00561	Abhydrolase_1	0.62
PF06863	DUF1254	0.62
PF07883	Cupin_2	0.62
PF03972	MmgE_PrpD	0.62
PF02738	MoCoBD_1	0.62
PF01553	Acyltransferase	0.62
PF13649	Methyltransf_25	0.62
PF04898	Glu_syn_central	0.62
PF00313	CSD	0.62
PF13467	RHH_4	0.62
PF13361	UvrD_C	0.62
PF00067	p450	0.62
PF04800	NDUS4	0.62
PF08388	GIIM	0.62
PF00486	Trans_reg_C	0.62
PF01979	Amidohydro_1	0.62
PF00496	SBP_bac_5	0.62
PF00501	AMP-binding	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	6.25
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.50
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.25
COG1045	Serine acetyltransferase	Amino acid transport and metabolism [E]	1.25
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.25
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.62
COG2124	Cytochrome P450	Defense mechanisms [V]	0.62
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.62 %
Unclassified	root	N/A	39.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.62 %
Unclassified	root	N/A	39.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	39.38 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.62 %
Unclassified	root	N/A	39.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.88 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	23.12 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.88 %
Fungi incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis	0.62 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.12 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.25 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.25 %
Elioraeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae	1.25 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.62 %
Mucoromycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota	0.62 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.62 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.62 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.62 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.62 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.62 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.12 %
Elioraea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea	1.25 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.25 %
Mucoromycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina	0.62 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.62 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.62 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.62 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.62 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.62 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.12 %
Elioraea rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1.25 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.25 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Umbelopsidomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Umbelopsidomycetes	0.62 %
unclassified Roseomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas	0.62 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.62 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.62 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.12 %
Elioraea rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1.25 %
Streptomyces humicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces humicola	0.62 %
Umbelopsidales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Umbelopsidomycetes → Umbelopsidales	0.62 %
Frankia gtarii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	0.62 %
Roseomonas sp. AR75	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. AR75	0.62 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	0.62 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.12 %
Elioraea rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1.25 %
Umbelopsidaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Umbelopsidomycetes → Umbelopsidales → Umbelopsidaceae	0.62 %
Streptomyces humicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces humicola	0.62 %
Frankia gtarii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	0.62 %
Roseomonas sp. AR75	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. AR75	0.62 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	0.62 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.12 %
Elioraea rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1.25 %
Umbelopsis	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Umbelopsidomycetes → Umbelopsidales → Umbelopsidaceae → Umbelopsis	0.62 %
Streptomyces humicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces humicola	0.62 %
Frankia gtarii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	0.62 %
Roseomonas sp. AR75	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. AR75	0.62 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	0.62 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.12 %
Elioraea rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1.25 %
Umbelopsis vinacea	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Umbelopsidomycetes → Umbelopsidales → Umbelopsidaceae → Umbelopsis → Umbelopsis vinacea	0.62 %
Streptomyces humicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces humicola	0.62 %
Frankia gtarii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	0.62 %
Roseomonas sp. AR75	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. AR75	0.62 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	0.62 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_100753902	Not Available	720	Open in IMG/M
3300004092\|Ga0062389_103146530	Not Available	618	Open in IMG/M
3300004152\|Ga0062386_101220014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300004635\|Ga0062388_102306561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300005177\|Ga0066690_10300335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1084	Open in IMG/M
3300005436\|Ga0070713_100322485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1427	Open in IMG/M
3300005468\|Ga0070707_101263616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	704	Open in IMG/M
3300005559\|Ga0066700_10327920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	1080	Open in IMG/M
3300005610\|Ga0070763_10490093	Not Available	702	Open in IMG/M
3300005764\|Ga0066903_101103075	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005764\|Ga0066903_102041007	Not Available	1102	Open in IMG/M
3300009038\|Ga0099829_11685039	Not Available	522	Open in IMG/M
3300009792\|Ga0126374_10522394	Not Available	860	Open in IMG/M
3300010159\|Ga0099796_10137152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → Elioraea rosea	953	Open in IMG/M
3300010361\|Ga0126378_12077837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300010376\|Ga0126381_100883066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1286	Open in IMG/M
3300010376\|Ga0126381_101824368	Not Available	878	Open in IMG/M
3300010398\|Ga0126383_10514050	All Organisms → cellular organisms → Bacteria → Proteobacteria	1258	Open in IMG/M
3300010398\|Ga0126383_13400226	Not Available	520	Open in IMG/M
3300011269\|Ga0137392_10568850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	941	Open in IMG/M
3300011271\|Ga0137393_10083671	All Organisms → cellular organisms → Bacteria	2571	Open in IMG/M
3300012362\|Ga0137361_10317474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1427	Open in IMG/M
3300012922\|Ga0137394_10054916	All Organisms → cellular organisms → Bacteria	3296	Open in IMG/M
3300012944\|Ga0137410_11193491	Not Available	655	Open in IMG/M
3300016270\|Ga0182036_10471362	Not Available	990	Open in IMG/M
3300016270\|Ga0182036_10487928	Not Available	974	Open in IMG/M
3300016270\|Ga0182036_11875800	Not Available	508	Open in IMG/M
3300016294\|Ga0182041_11386383	Not Available	645	Open in IMG/M
3300016294\|Ga0182041_12157404	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300016319\|Ga0182033_10589543	Not Available	964	Open in IMG/M
3300016319\|Ga0182033_12102468	Not Available	515	Open in IMG/M
3300016341\|Ga0182035_10546954	Not Available	994	Open in IMG/M
3300016341\|Ga0182035_10759860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300016341\|Ga0182035_11035294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300016341\|Ga0182035_11977223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300016357\|Ga0182032_10209400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1490	Open in IMG/M
3300016357\|Ga0182032_10347464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1186	Open in IMG/M
3300016357\|Ga0182032_10616718	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300016357\|Ga0182032_11151590	Not Available	666	Open in IMG/M
3300016371\|Ga0182034_10354252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1192	Open in IMG/M
3300016371\|Ga0182034_10684762	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300016371\|Ga0182034_10959382	Not Available	737	Open in IMG/M
3300016371\|Ga0182034_11182206	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300016387\|Ga0182040_11603332	Not Available	554	Open in IMG/M
3300016387\|Ga0182040_11842629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300016404\|Ga0182037_10793627	Not Available	816	Open in IMG/M
3300016404\|Ga0182037_11052161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300016404\|Ga0182037_11124919	Not Available	688	Open in IMG/M
3300016404\|Ga0182037_11648404	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300016404\|Ga0182037_11740342	Not Available	556	Open in IMG/M
3300016422\|Ga0182039_11401346	Not Available	635	Open in IMG/M
3300016422\|Ga0182039_11401955	Not Available	635	Open in IMG/M
3300016422\|Ga0182039_11594969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300016422\|Ga0182039_12170018	Not Available	512	Open in IMG/M
3300016445\|Ga0182038_11143876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300016445\|Ga0182038_12197554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300020579\|Ga0210407_10874961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300020579\|Ga0210407_10980976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300020579\|Ga0210407_11191635	Not Available	573	Open in IMG/M
3300020580\|Ga0210403_11072118	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300020581\|Ga0210399_10188787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1712	Open in IMG/M
3300020581\|Ga0210399_10855454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300020581\|Ga0210399_11023987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300021171\|Ga0210405_10099216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	2297	Open in IMG/M
3300021178\|Ga0210408_10539566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	926	Open in IMG/M
3300021178\|Ga0210408_11014764	Not Available	641	Open in IMG/M
3300021405\|Ga0210387_10357193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1291	Open in IMG/M
3300021405\|Ga0210387_11068022	Not Available	705	Open in IMG/M
3300021420\|Ga0210394_11246052	Not Available	637	Open in IMG/M
3300021433\|Ga0210391_11422500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300021476\|Ga0187846_10191813	Not Available	858	Open in IMG/M
3300021478\|Ga0210402_10419121	All Organisms → cellular organisms → Bacteria → Proteobacteria	1243	Open in IMG/M
3300021478\|Ga0210402_11173895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300021479\|Ga0210410_11346604	Not Available	606	Open in IMG/M
3300021560\|Ga0126371_10051035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3959	Open in IMG/M
3300021560\|Ga0126371_10189432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2146	Open in IMG/M
3300021560\|Ga0126371_10272986	Not Available	1811	Open in IMG/M
3300021560\|Ga0126371_10516266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1343	Open in IMG/M
3300021560\|Ga0126371_10763664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. AR75	1114	Open in IMG/M
3300021560\|Ga0126371_13403130	Not Available	537	Open in IMG/M
3300021560\|Ga0126371_13670969	Not Available	518	Open in IMG/M
3300022717\|Ga0242661_1022048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1035	Open in IMG/M
3300025898\|Ga0207692_10239414	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Umbelopsidomycetes → Umbelopsidales → Umbelopsidaceae → Umbelopsis → Umbelopsis vinacea	1083	Open in IMG/M
3300026557\|Ga0179587_10887907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300027576\|Ga0209003_1017021	Not Available	1148	Open in IMG/M
3300028906\|Ga0308309_10385033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1201	Open in IMG/M
3300028906\|Ga0308309_11826718	Not Available	514	Open in IMG/M
3300031231\|Ga0170824_104207858	Not Available	672	Open in IMG/M
3300031543\|Ga0318516_10260972	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300031545\|Ga0318541_10312547	Not Available	876	Open in IMG/M
3300031561\|Ga0318528_10026358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2827	Open in IMG/M
3300031564\|Ga0318573_10187389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300031573\|Ga0310915_10683542	Not Available	725	Open in IMG/M
3300031668\|Ga0318542_10089884	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300031668\|Ga0318542_10297085	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300031668\|Ga0318542_10724715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300031679\|Ga0318561_10580330	Not Available	617	Open in IMG/M
3300031680\|Ga0318574_10114599	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300031681\|Ga0318572_10229467	Not Available	1089	Open in IMG/M
3300031682\|Ga0318560_10605451	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031708\|Ga0310686_111432722	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031719\|Ga0306917_10008195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5857	Open in IMG/M
3300031719\|Ga0306917_11177536	Not Available	595	Open in IMG/M
3300031723\|Ga0318493_10150788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1202	Open in IMG/M
3300031724\|Ga0318500_10175204	Not Available	1019	Open in IMG/M
3300031744\|Ga0306918_10166286	Not Available	1641	Open in IMG/M
3300031744\|Ga0306918_10793320	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031768\|Ga0318509_10691602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300031770\|Ga0318521_10008054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4347	Open in IMG/M
3300031771\|Ga0318546_11223589	Not Available	527	Open in IMG/M
3300031777\|Ga0318543_10238926	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300031781\|Ga0318547_10938707	Not Available	540	Open in IMG/M
3300031796\|Ga0318576_10385820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300031798\|Ga0318523_10173994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1074	Open in IMG/M
3300031819\|Ga0318568_10174018	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300031823\|Ga0307478_11540169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300031833\|Ga0310917_10715933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300031879\|Ga0306919_10639286	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031879\|Ga0306919_11176798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300031890\|Ga0306925_11349463	Not Available	706	Open in IMG/M
3300031894\|Ga0318522_10027225	Not Available	1907	Open in IMG/M
3300031897\|Ga0318520_10083208	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300031897\|Ga0318520_10218195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	1130	Open in IMG/M
3300031910\|Ga0306923_10199347	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300031910\|Ga0306923_10765480	Not Available	1069	Open in IMG/M
3300031912\|Ga0306921_10447726	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300031912\|Ga0306921_12518525	Not Available	533	Open in IMG/M
3300031912\|Ga0306921_12724014	Not Available	507	Open in IMG/M
3300031941\|Ga0310912_10025273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3983	Open in IMG/M
3300031941\|Ga0310912_10396276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1074	Open in IMG/M
3300031942\|Ga0310916_10417322	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1142	Open in IMG/M
3300031945\|Ga0310913_10082997	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300031945\|Ga0310913_10433134	Not Available	933	Open in IMG/M
3300031946\|Ga0310910_10260148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1359	Open in IMG/M
3300031946\|Ga0310910_10678475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300031946\|Ga0310910_11344691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031946\|Ga0310910_11459635	Not Available	525	Open in IMG/M
3300031947\|Ga0310909_11341372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300031947\|Ga0310909_11356097	Not Available	570	Open in IMG/M
3300031954\|Ga0306926_10208135	Not Available	2427	Open in IMG/M
3300031954\|Ga0306926_12139366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300031962\|Ga0307479_10838594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300032001\|Ga0306922_10594856	Not Available	1173	Open in IMG/M
3300032035\|Ga0310911_10791487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces humicola	548	Open in IMG/M
3300032052\|Ga0318506_10092399	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300032052\|Ga0318506_10330766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300032059\|Ga0318533_10067294	Not Available	2419	Open in IMG/M
3300032059\|Ga0318533_10310255	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300032059\|Ga0318533_11045793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300032060\|Ga0318505_10590153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300032063\|Ga0318504_10365114	Not Available	686	Open in IMG/M
3300032068\|Ga0318553_10288557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	858	Open in IMG/M
3300032076\|Ga0306924_10963104	Not Available	939	Open in IMG/M
3300032090\|Ga0318518_10132548	Not Available	1259	Open in IMG/M
3300032090\|Ga0318518_10384294	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300032091\|Ga0318577_10109448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia gtarii	1298	Open in IMG/M
3300032180\|Ga0307471_103135095	Not Available	586	Open in IMG/M
3300032261\|Ga0306920_100435490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1948	Open in IMG/M
3300033289\|Ga0310914_11825319	Not Available	512	Open in IMG/M
3300033290\|Ga0318519_10533611	Not Available	709	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.50%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.88%
Freshwater	Environmental → Aquatic → Freshwater	2.50%
Cave	Environmental → Terrestrial → Cave	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.25%
Loam	Environmental → Terrestrial → Soil → Loam	5.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.50%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	76.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.25%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.62%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1007539021	3300004091	Bog Forest Soil	MDARDPAKAVEVLDLLLTLFGEGERWIKGRFSDRRGNCCLVGALD
Ga0062389_1031465301	3300004092	Bog Forest Soil	MDARDPAEAAKILDLLLTFFGEGQRWIKGRFSDRRGKCCLVGALDFVSSH
Ga0062386_1012200141	3300004152	Bog Forest Soil	MHARDPAKAVEVLDLLLGFFGDGEHWVKEKLGDRHGKRCLVGALDFIRRH
Ga0062388_1023065611	3300004635	Bog Forest Soil	MDARDPAEAVEVLDLLLTFFGEGERWIKGRFSDRRGNCCLVGALDFV
Ga0066690_103003351	3300005177	Soil	MDERDLAEAVEVLDLLLKFFGDGERWVRGRLSDRRGNRCLVG
Ga0070713_1003224853	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHARDPAEAVEVLNLLLKFFGDGERWIKGRFSDRRGNCCLVGALDFVSGHHVIKGD
Ga0070707_1012636162	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMHALDPAEAIEVLNLLLKFFGDGERWIKGRFSDRRGNCCLVGALDFVSSHHA
Ga0066700_103279201	3300005559	Soil	MMHALDPAEAVEVLNLLLKFFGDGERWIKGRFSDRRGNC
Ga0070763_104900931	3300005610	Soil	MYARDPTEAVEVLRLLLKFFGDGERWIKGRFSDRRGNC
Ga0066903_1011030751	3300005764	Tropical Forest Soil	MGAYDPAEAAEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFV
Ga0066903_1020410073	3300005764	Tropical Forest Soil	MGARDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIESD
Ga0099829_116850391	3300009038	Vadose Zone Soil	MWRRDFMGARDPAEAVEVMDLLLKFFGDGERWVKGRLSDRRGNRCLVGA*
Ga0126374_105223941	3300009792	Tropical Forest Soil	MDVSDPAEAVEVLDLLLKFFGNGERWVRGRLSDRRGNRCLVGALDFVSSHHG
Ga0099796_101371521	3300010159	Vadose Zone Soil	MMHALDPAEAVEVLNLLLKFFGDGERWIKGRFSDRRGNCCLVGALD
Ga0126378_120778372	3300010361	Tropical Forest Soil	MRRRDVIGARDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGN
Ga0126381_1008830661	3300010376	Tropical Forest Soil	VEADFMGTSDPAEAVEVLEMLLKFFSNGERWVRGRLSDRRGNRCLVGALDFVSSRHGVKA
Ga0126381_1018243682	3300010376	Tropical Forest Soil	MSARDPAEAVEFLDLLLKFFGDGERWVQGRLSDRRGNPAS*
Ga0126383_105140501	3300010398	Tropical Forest Soil	MGARDPAEAVEVLDRLLNFFGDDERWVKGRLSDRRGNRCLV
Ga0126383_134002262	3300010398	Tropical Forest Soil	MGASDPAEAVEVIDLLLKFFGDGERWVRGRLSDCRVSPAP*
Ga0137392_105688502	3300011269	Vadose Zone Soil	MHARDPAEGAEVLDLLLKFFGDGERWIKGRLSDRRGNCCLVGALDFV
Ga0137393_100836713	3300011271	Vadose Zone Soil	MGARDPAEAVEVMHLLLKFFGDGERWVKGRLSDRRGNRCLVGA*
Ga0137361_103174741	3300012362	Vadose Zone Soil	MHARDPAEAVEVLNLLLKFFGDGERWIKGRFSDRRG
Ga0137394_100549164	3300012922	Vadose Zone Soil	MGARDPAEAVEVMDLLLKFFGNGERWVKGRLSDRRGNRCLVGALDFVSS
Ga0137410_111934911	3300012944	Vadose Zone Soil	MWWRDFMDARDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCL
Ga0182036_104713621	3300016270	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHVM
Ga0182036_104879281	3300016270	Soil	MGARDPTEAVELLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFVSSH
Ga0182036_118758001	3300016270	Soil	MGAREPAEAIEILDLLLKFFGNGERWVKGRLSDRRGNR
Ga0182041_113863831	3300016294	Soil	MGARDPTEAVELLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHVM
Ga0182041_121574041	3300016294	Soil	VGARDPAEAIEVLDLLLKFFGEGERWVKGRLSDRRGNRCLVGA
Ga0182033_105895431	3300016319	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFVSSH
Ga0182033_121024681	3300016319	Soil	MGAREPAEAIEILDLLLKFFGNGERWVKGRLSDRRGNRC
Ga0182035_105469541	3300016341	Soil	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGKRCLVGALDFVSSH
Ga0182035_107598601	3300016341	Soil	MDVHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRR
Ga0182035_110352941	3300016341	Soil	MSARDPAEAVELLDLLLKFFGEGERWVKGRLSDRRGNRCLVGALDFVSS
Ga0182035_119772231	3300016341	Soil	MSARDAAAAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGAL
Ga0182032_102094001	3300016357	Soil	MSARDPAEAIEFLDLLLKFFGDGERWVKGRLSDRRGNR
Ga0182032_103474641	3300016357	Soil	MGTRDPAEAIEVLDLLVKFFGNGERWVKGRLSDRRGNRCLVGA
Ga0182032_106167182	3300016357	Soil	MWRRDFVGARDPAEAIEVLDLLLKFFGEGERWVKGRLSDRRGNRCLDGALDFV
Ga0182032_111515902	3300016357	Soil	LDVRDPAEAVKVLDLLLKIFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIQSDA
Ga0182034_103542523	3300016371	Soil	MSARDAAAAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIRS
Ga0182034_106847622	3300016371	Soil	MWRRDFVGARDPAEAIEVLDLLLKFFGEGERWVKGRLSDRRGNRCLVGA
Ga0182034_109593823	3300016371	Soil	MDTRDPAEAVEVLDLLLKFFGDGERRTRGRLSDRRGNRCLVGALDFVSSHRAMN
Ga0182034_111822061	3300016371	Soil	MGACDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNCCLVGALDFVSS
Ga0182040_116033321	3300016387	Soil	LDVRDPAEAVKVLDLLLKIFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIQS
Ga0182040_118426291	3300016387	Soil	MSARDAAAAVEVLDLLLKFFGDGERWVKGRLSDRRGNR
Ga0182037_107936271	3300016404	Soil	MSTRDPADAVEVLDLLLKFFGDGERWGRGRLSDRPGNRCLVGALEFVSSHHAIQSD
Ga0182037_110521611	3300016404	Soil	MSARDPAEAVEVLDLLLKFFVDGERWVKGRLSDRRGNRCLV
Ga0182037_111249192	3300016404	Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHVMKGD
Ga0182037_116484041	3300016404	Soil	MGACDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHH
Ga0182037_117403421	3300016404	Soil	MGARDPTEAVELLDRLLRFFGDGERWVKGRLSDRRGNRCLVGAL
Ga0182039_114013461	3300016422	Soil	MGARDPAKAIEVLDLLLKFFGNGERWVKGRLSDRRGNRCLVGA
Ga0182039_114019551	3300016422	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDF
Ga0182039_115949692	3300016422	Soil	MDARDPAEAIEVLDLLLKFFDNGERWVKGRLSDRRGNRCLVGALDFVSSHRAIKGDA
Ga0182039_121700181	3300016422	Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGAL
Ga0182038_111438762	3300016445	Soil	MSARDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCL
Ga0182038_121975542	3300016445	Soil	MDARDPAEAIEVLDLLLKFFDNGERWVKGRLSDRRGNRCLVGA
Ga0210407_108749611	3300020579	Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSGCHTIQ
Ga0210407_109809762	3300020579	Soil	MHVRDPAEAVEVLNLLLKFFGDGERWIKGRFSDRRGNCCLV
Ga0210407_111916351	3300020579	Soil	MHAHGPAEAVEVLNRLLKFFGDGERWIKGRLSDRRGKCCLVGA
Ga0210403_110721182	3300020580	Soil	MHARDPAEALEVLNLLLKFFGDGERWIKGRFSDRRGNCCLVGALDFVSGHHAIKGD
Ga0210399_101887873	3300020581	Soil	MYTPDPAESVEVLNLLLKFFGDGERWIKGRFSDRRGNCCLVGALDFVS
Ga0210399_108554541	3300020581	Soil	MSARDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLIGALDFVSSHH
Ga0210399_110239872	3300020581	Soil	MSASDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVAALDFV
Ga0210405_100992163	3300021171	Soil	MHAHGPAEAVEVLNRLLKFFGDGERWIKGRLSDRRGKCCLVGALDF
Ga0210408_105395661	3300021178	Soil	MGASDPAEAVEVLDLLLKFFGNGERWVRGRLSDRRGNRCLVGAL
Ga0210408_110147642	3300021178	Soil	MHARDPAEAVEVLHLVLKFFGDGERWIKGRFTDRRG
Ga0210387_103571932	3300021405	Soil	MHAHGPAEAVEVLNRLLKFFGDGERWIKGRLSDRRG
Ga0210387_110680221	3300021405	Soil	MHAHDPAEAVEVLNRLLKFFGDGERWIKGRLSDRPR
Ga0210394_112460521	3300021420	Soil	MHARDPAEAVEVLHLVLKFFGDGERRIKGRFTDRRG
Ga0210391_114225002	3300021433	Soil	MHVRDPAEAVEVLNLLLKFFGDGERWIKGRFSDRRGNCCLVGAIDFVSSHHAI
Ga0187846_101918131	3300021476	Biofilm	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGNRCLVGALD
Ga0210402_104191211	3300021478	Soil	MHARDPAEAVEVLHLVLKFFGDGERWIKGRFTDRRGNCCL
Ga0210402_111738953	3300021478	Soil	MGARDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLIGALDFVSSHHAMK
Ga0210410_113466042	3300021479	Soil	MHARDPAEAVEVLHLVLKFFGDGERWIKGRFTDRR
Ga0126371_100510358	3300021560	Tropical Forest Soil	MGARDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGNRC
Ga0126371_101894321	3300021560	Tropical Forest Soil	MGARDPAEAIEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGA
Ga0126371_102729862	3300021560	Tropical Forest Soil	MGARDPAEAVEVLDRLLNFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIE
Ga0126371_105162661	3300021560	Tropical Forest Soil	VRGRYTRTSPRMRRRDVIGARDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGA
Ga0126371_107636643	3300021560	Tropical Forest Soil	MGTSDPAEAVEVLEMLLKFFSNGERWVRGRLSDRRGNRCLVGALDFVSSRHGVKADAA
Ga0126371_134031301	3300021560	Tropical Forest Soil	MGARDPAEAVEILNLVLKFFGDGERWVKGRLSDRRGNRCLVGALDF
Ga0126371_136709691	3300021560	Tropical Forest Soil	MEAHEPAEAVAVLDLLLKFFGDGERWVKGRLSDRRGNRCL
Ga0242661_10220482	3300022717	Soil	MHAHDPAEAVEVSNRLLKFFGDGERWIKGRLSDRPR
Ga0207692_102394142	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MGARDPAEAVEVMELLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHATKGRRG
Ga0179587_108879072	3300026557	Vadose Zone Soil	MDARDPAEAVEVLDLLLTFFGEGERWIKGRFSDRRGNCCLVGALDFVGG
Ga0209003_10170211	3300027576	Forest Soil	MYARDPAEAAEVLNLLLKFFGDGERWVKGRLSDRRGNRCLVGALD
Ga0308309_103850331	3300028906	Soil	MHARDPAEAVEVLNLLLKFFGDGERWIKGRFSDRR
Ga0308309_118267181	3300028906	Soil	MGARDPAEAVEVMDLLLKFFGDGERWVKGRLSDRRGNRCLVG
Ga0170824_1042078581	3300031231	Forest Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRC
Ga0318516_102609721	3300031543	Soil	VGARDPAEAIEVLDLLLKFFGEGERWVKGRLSDRRGNRC
Ga0318541_103125471	3300031545	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALD
Ga0318528_100263581	3300031561	Soil	MDVRDPAEAAEVLDLLLKFFGDGERWVKGRLSDRRGN
Ga0318573_101873891	3300031564	Soil	MDVHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHA
Ga0310915_106835421	3300031573	Soil	MSARDPAEAVEVLDLLLKFFGDGQRWVKGRLSDRRGNRCLVGALDFVSSQHAI
Ga0318542_100898844	3300031668	Soil	MGARDPAEAIEVLDLLLKFFGNGERWVKGRLSDRRGNRCLVGALDFVSAIAR
Ga0318542_102970851	3300031668	Soil	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGKRCLVGALDFVSSHHAIGSDAA
Ga0318542_107247151	3300031668	Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGGL
Ga0318561_105803302	3300031679	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVMARSMPR
Ga0318574_101145991	3300031680	Soil	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRR
Ga0318572_102294671	3300031681	Soil	MDARDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNR
Ga0318560_106054511	3300031682	Soil	MSARDQADAVEVLDLLLKFFGDGERWVKGRLSDRRG
Ga0310686_1114327222	3300031708	Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVS
Ga0306917_100081951	3300031719	Soil	MDVHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVG
Ga0306917_111775361	3300031719	Soil	MGARDPAKAIEVLDLLLKFFGNGERWVKGRLSDRRGNRCLVGALDFVSSHR
Ga0318493_101507883	3300031723	Soil	MSARDQADAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVS
Ga0318500_101752041	3300031724	Soil	MGTRDPTKAVEVLDLLLKFFGDGERWVKGRLSDRRGNR
Ga0306918_101662861	3300031744	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHVMK
Ga0306918_107933201	3300031744	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFV
Ga0318509_106916021	3300031768	Soil	MSARDQADAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSRHA
Ga0318521_100080546	3300031770	Soil	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGKR
Ga0318546_112235892	3300031771	Soil	MSARDPAEAVEVLDLLLKFFVDGERWVKGRLSDRRG
Ga0318543_102389261	3300031777	Soil	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGKRCLVGALDFVNSHH
Ga0318547_109387071	3300031781	Soil	LDVRDPAEAVKVLDLLLKIFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIQSDAAEL
Ga0318576_103858202	3300031796	Soil	MDARDPAEAIEVLDLLLKFFDNGERWVKGRLSDRRGNRCLVGALDFVSSH
Ga0318523_101739943	3300031798	Soil	MYARDPAEAAEVLNLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIR
Ga0318568_101740182	3300031819	Soil	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGKRCLVGALDFVNSHHAIGS
Ga0307478_115401691	3300031823	Hardwood Forest Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGN
Ga0310917_107159331	3300031833	Soil	MHAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDF
Ga0306919_106392862	3300031879	Soil	MWRRDFVGARDPAEAIEVLDLLLKFFGEGERWVKGRLSDRRGNRCLDG
Ga0306919_111767981	3300031879	Soil	MSARDAAAAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLV
Ga0306925_113494631	3300031890	Soil	MGARDPAKAIEVLDLLLKFFGNGERWVKGRLSDRRGNRCLVGALDFVSS
Ga0318522_100272251	3300031894	Soil	MDTRDPAEAVEVLDLLLKFFGDGERRTRGRLSDRRGN
Ga0318520_100832084	3300031897	Soil	MWRRDFVGARDPAEAIEVLDLLLKFFGEGERWVKGRLSDRRGNRCLDGALDFVSKHHGMK
Ga0318520_102181951	3300031897	Soil	MGACDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVS
Ga0306923_101993471	3300031910	Soil	MSARDAAAAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGA
Ga0306923_107654801	3300031910	Soil	MDARDPAEAVEVLDVLLKFFGNGERWVKGRLSDRRGNRCLVGALDFVSSHHAIR
Ga0306921_104477262	3300031912	Soil	MDTRDPAEAVEILDLLLKFFGEGERWIKGRFSDRR
Ga0306921_125185252	3300031912	Soil	MGARDPAEAIEVLDLLLKFFGNGERWVKGRLSDRRGNRCLV
Ga0306921_127240141	3300031912	Soil	LDVRDPAEAVKVLDLLLKIFGDGERWVKGRLSDRRGNRCLVGALDFVS
Ga0310912_100252738	3300031941	Soil	MSARDQADAVEVLDLLLKFFGDGERWVKGRLSDRRGNRC
Ga0310912_103962761	3300031941	Soil	VGARDPAEAIEVLDLLLKFFGEGERWVKGRLSDRRGNRCLVGALDF
Ga0310916_104173221	3300031942	Soil	MSARDPAEAIEFLDLLLKFFGDGERWVKGRLSDRRGNRC
Ga0310913_100829972	3300031945	Soil	MGARDPTEAVELLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHH
Ga0310913_104331343	3300031945	Soil	MSARDPAEAIEFLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVS
Ga0310910_102601481	3300031946	Soil	MSARDPAEAVELLDLLLKFFGEGERWVKGRLSDRRGNRCLVGALDFVSSHHAIQ
Ga0310910_106784752	3300031946	Soil	MSARDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRC
Ga0310910_113446912	3300031946	Soil	MSARDAAAAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCL
Ga0310910_114596351	3300031946	Soil	LDVRDPAEAVKVLDLLLKIFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIQSD
Ga0310909_113413722	3300031947	Soil	MDARDPAEAIEVLDLLLKFFDNGERWVKGRLSDRRGNR
Ga0310909_113560972	3300031947	Soil	MSARDPAEAIEFLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDF
Ga0306926_102081354	3300031954	Soil	MGARDPTEAVELLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFV
Ga0306926_121393663	3300031954	Soil	MYARDPAEAVEVLDLLLKFFGDGEHWVKGRLSDRRGNRC
Ga0307479_108385941	3300031962	Hardwood Forest Soil	MHARDPAEAVEVLNLLLKFFGDGERWIKGRFSDRRGNCCLVGALDFVSG
Ga0306922_105948562	3300032001	Soil	MGARDPTEAVELLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAMK
Ga0310911_107914872	3300032035	Soil	MSARDPAEAIEFLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALE
Ga0318506_100923991	3300032052	Soil	MSARDQADAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSRHAI
Ga0318506_103307662	3300032052	Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSGCQTIQS
Ga0318533_100672941	3300032059	Soil	MGARDPTEAVELLDRLLRFFGDGERWVKGRLSDRRGN
Ga0318533_103102551	3300032059	Soil	MDMHDSAEAVEVLDLLLKFFGDGQRWVRGRLNDRRGN
Ga0318533_110457931	3300032059	Soil	MSARDPAEAVEVLDLLLKFFVDGERWVKGRLSDRRGNRCLVGA
Ga0318505_105901531	3300032060	Soil	MDVHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHAIQS
Ga0318504_103651141	3300032063	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVGALDFVSSHHV
Ga0318553_102885571	3300032068	Soil	MDARDPAEAIEVLDLLLKFFDNGERWVKGRLSDRRGNRCLVG
Ga0306924_109631041	3300032076	Soil	MGARDPAEAVEVLDRLLRFFGDGERWVKGRLSDRRGNRCLVGAL
Ga0318518_101325481	3300032090	Soil	MDTRDPAEAVEVLDLLLKFFGDGERRTRGRLSDRRGNR
Ga0318518_103842941	3300032090	Soil	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGKRCLV
Ga0318577_101094482	3300032091	Soil	MGAHDPAEAVEVLDRLLKFFGDGERWVKGRLSDRRGKRCLVGALD
Ga0307471_1031350951	3300032180	Hardwood Forest Soil	MGACDPAEAVEVLDLLLKFFGDGERWVKGRLSDRR
Ga0306920_1004354904	3300032261	Soil	MSAHDPAEAVEVLDLLLKFFGDGERWVKGRLSDRRGNRCLVGA
Ga0310914_118253191	3300033289	Soil	MSVRDPAEAIEVLDRLLKFFGDGERWVKGRFSDRRGNRCLVGALDFVSSHYAM
Ga0318519_105336111	3300033290	Soil	MDTRDPAEAVEVLDLLLKFFGDGERRTRGRLSDRRGNRCLVGAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040991

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences