Metagenome / Metatranscriptome Family F040936

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040936
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	42 residues
Representative Sequence	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLKRSS
Number of Associated Samples	86
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.44 %
% of genes near scaffold ends (potentially truncated)	16.77 %
% of genes from short scaffolds (< 2000 bps)	73.29 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.578 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (27.950 % of family members)
Environment Ontology (ENVO)	Unclassified (31.056 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.081 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.34% β-sheet: 0.00% Coil/Unstructured: 43.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF01578	Cytochrom_C_asm	34.78
PF12158	DUF3592	13.04
PF03379	CcmB	6.83
PF01841	Transglut_core	2.48
PF00583	Acetyltransf_1	1.86
PF08281	Sigma70_r4_2	1.86
PF01402	RHH_1	1.86
PF03992	ABM	1.86
PF00005	ABC_tran	1.86
PF03100	CcmE	1.24
PF12704	MacB_PCD	1.24
PF06769	YoeB_toxin	1.24
PF01850	PIN	1.24
PF04542	Sigma70_r2	1.24
PF01152	Bac_globin	0.62
PF13620	CarboxypepD_reg	0.62
PF16327	CcmF_C	0.62
PF12770	CHAT	0.62
PF11154	DUF2934	0.62
PF14559	TPR_19	0.62
PF13975	gag-asp_proteas	0.62
PF04023	FeoA	0.62
PF13650	Asp_protease_2	0.62
PF13424	TPR_12	0.62
PF13231	PMT_2	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	6.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.24
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.24
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.24
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	1.24
COG4115	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	Defense mechanisms [V]	1.24
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.24
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.62
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.58 %
Unclassified	root	N/A	12.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.58 %
Unclassified	root	N/A	12.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.58 %
Unclassified	root	N/A	12.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.48 %
Unclassified	root	N/A	12.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	32.92 %
Unclassified	root	N/A	12.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.48 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.62 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	31.68 %
Unclassified	root	N/A	12.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.24 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.24 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	0.62 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	31.68 %
Unclassified	root	N/A	12.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.24 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.24 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	0.62 %
Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	25.47 %
Unclassified	root	N/A	12.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.24 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1.24 %
Thiothrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix	0.62 %
Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	14.29 %
Unclassified	root	N/A	12.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.24 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1.24 %
Thiothrix caldifontis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix caldifontis	0.62 %
Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1.24 %
Olavius algarvensis Delta 1 endosymbiont	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1.24 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.62 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.62 %
Thiothrix caldifontis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix caldifontis	0.62 %
Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001404\|JGI20181J14860_1001447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3306	Open in IMG/M
3300003218\|JGI26339J46600_10010444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2705	Open in IMG/M
3300003218\|JGI26339J46600_10030993	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1505	Open in IMG/M
3300003218\|JGI26339J46600_10038156	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300003218\|JGI26339J46600_10090815	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300003218\|JGI26339J46600_10095320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	735	Open in IMG/M
3300003218\|JGI26339J46600_10097055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300003219\|JGI26341J46601_10061420	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300003219\|JGI26341J46601_10180556	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300003223\|JGI26343J46809_1019521	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300003368\|JGI26340J50214_10192237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	505	Open in IMG/M
3300003369\|JGI24140J50213_10046438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1553	Open in IMG/M
3300003369\|JGI24140J50213_10084336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1073	Open in IMG/M
3300004080\|Ga0062385_10013877	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2844	Open in IMG/M
3300004080\|Ga0062385_10026946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2252	Open in IMG/M
3300004091\|Ga0062387_101340182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	567	Open in IMG/M
3300004091\|Ga0062387_101591092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	527	Open in IMG/M
3300004092\|Ga0062389_104219970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	540	Open in IMG/M
3300004152\|Ga0062386_100123364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2005	Open in IMG/M
3300004152\|Ga0062386_100445744	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300004152\|Ga0062386_100474580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1014	Open in IMG/M
3300004152\|Ga0062386_100625117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	881	Open in IMG/M
3300004152\|Ga0062386_100937723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix caldifontis	716	Open in IMG/M
3300004152\|Ga0062386_101437219	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300004152\|Ga0062386_101626260	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	539	Open in IMG/M
3300004152\|Ga0062386_101855874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	503	Open in IMG/M
3300004635\|Ga0062388_100165558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1699	Open in IMG/M
3300005219\|Ga0069004_10259867	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005532\|Ga0070739_10314675	Not Available	749	Open in IMG/M
3300005614\|Ga0068856_101300534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	742	Open in IMG/M
3300005614\|Ga0068856_101555378	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005764\|Ga0066903_107290000	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005921\|Ga0070766_10000629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	15942	Open in IMG/M
3300005994\|Ga0066789_10454581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	535	Open in IMG/M
3300006055\|Ga0097691_1000042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	113840	Open in IMG/M
3300006162\|Ga0075030_100930053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	685	Open in IMG/M
3300006642\|Ga0075521_10000074	All Organisms → cellular organisms → Bacteria	20487	Open in IMG/M
3300006642\|Ga0075521_10006567	All Organisms → cellular organisms → Bacteria → Proteobacteria	4341	Open in IMG/M
3300006642\|Ga0075521_10265547	Not Available	822	Open in IMG/M
3300006642\|Ga0075521_10318223	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300006795\|Ga0075520_1266815	Not Available	709	Open in IMG/M
3300009029\|Ga0066793_10167799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1279	Open in IMG/M
3300009698\|Ga0116216_10559859	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300010048\|Ga0126373_11431211	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300010339\|Ga0074046_10459480	Not Available	763	Open in IMG/M
3300010339\|Ga0074046_10753155	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010339\|Ga0074046_10847871	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010341\|Ga0074045_10007196	All Organisms → cellular organisms → Bacteria	9513	Open in IMG/M
3300010341\|Ga0074045_10086453	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300010341\|Ga0074045_10121797	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300010341\|Ga0074045_10158069	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26	1536	Open in IMG/M
3300010343\|Ga0074044_10291509	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300010343\|Ga0074044_10292779	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300010371\|Ga0134125_12215775	Not Available	597	Open in IMG/M
3300010376\|Ga0126381_104374456	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300010379\|Ga0136449_100008434	All Organisms → cellular organisms → Bacteria	29107	Open in IMG/M
3300010379\|Ga0136449_102650369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	713	Open in IMG/M
3300014164\|Ga0181532_10181785	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300014501\|Ga0182024_12126166	Not Available	617	Open in IMG/M
3300016702\|Ga0181511_1125998	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300017925\|Ga0187856_1305728	Not Available	546	Open in IMG/M
3300017943\|Ga0187819_10120626	All Organisms → cellular organisms → Bacteria → Acidobacteria	1565	Open in IMG/M
3300017955\|Ga0187817_10112455	All Organisms → cellular organisms → Bacteria → Acidobacteria	1720	Open in IMG/M
3300017955\|Ga0187817_10427309	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300017970\|Ga0187783_10006191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8794	Open in IMG/M
3300017972\|Ga0187781_10386443	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300017973\|Ga0187780_10958819	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300018003\|Ga0187876_1003573	All Organisms → cellular organisms → Bacteria → Acidobacteria	10501	Open in IMG/M
3300018062\|Ga0187784_10329299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1239	Open in IMG/M
3300018088\|Ga0187771_11320686	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300021401\|Ga0210393_11078256	Not Available	649	Open in IMG/M
3300021433\|Ga0210391_10208672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1536	Open in IMG/M
3300021560\|Ga0126371_12293407	Not Available	652	Open in IMG/M
3300023090\|Ga0224558_1044373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1874	Open in IMG/M
3300025427\|Ga0208077_1004033	Not Available	2079	Open in IMG/M
3300025457\|Ga0208850_1076832	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300025481\|Ga0208079_1003994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6587	Open in IMG/M
3300025579\|Ga0207927_1008097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3715	Open in IMG/M
3300025579\|Ga0207927_1020294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2038	Open in IMG/M
3300025579\|Ga0207927_1034761	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300025604\|Ga0207930_1032106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1400	Open in IMG/M
3300025650\|Ga0209385_1001373	All Organisms → cellular organisms → Bacteria → Acidobacteria	10327	Open in IMG/M
3300025878\|Ga0209584_10169626	Not Available	826	Open in IMG/M
3300025878\|Ga0209584_10361796	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300026057\|Ga0208294_1040145	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300027394\|Ga0209904_1003922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1113	Open in IMG/M
3300027680\|Ga0207826_1094788	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300027698\|Ga0209446_1004651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3377	Open in IMG/M
3300027698\|Ga0209446_1006132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2946	Open in IMG/M
3300027703\|Ga0207862_1107894	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300027783\|Ga0209448_10003069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5158	Open in IMG/M
3300027812\|Ga0209656_10005941	All Organisms → cellular organisms → Bacteria → Acidobacteria	7836	Open in IMG/M
3300027812\|Ga0209656_10011417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5585	Open in IMG/M
3300027812\|Ga0209656_10031554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3136	Open in IMG/M
3300027812\|Ga0209656_10063538	All Organisms → cellular organisms → Bacteria → Acidobacteria	2034	Open in IMG/M
3300027812\|Ga0209656_10088117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1653	Open in IMG/M
3300027812\|Ga0209656_10097556	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300027812\|Ga0209656_10114434	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300027812\|Ga0209656_10123163	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300027812\|Ga0209656_10301279	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300027812\|Ga0209656_10507273	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300027824\|Ga0209040_10010095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6619	Open in IMG/M
3300027824\|Ga0209040_10225242	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300027824\|Ga0209040_10245413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	901	Open in IMG/M
3300027824\|Ga0209040_10537887	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300027825\|Ga0209039_10031197	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300027825\|Ga0209039_10200554	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300027825\|Ga0209039_10229531	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300027825\|Ga0209039_10334006	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300027889\|Ga0209380_10009286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5772	Open in IMG/M
3300027902\|Ga0209048_10386248	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300027902\|Ga0209048_10925511	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300027905\|Ga0209415_10500626	Not Available	936	Open in IMG/M
3300028652\|Ga0302166_10068813	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300028652\|Ga0302166_10109342	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300028739\|Ga0302205_10142476	Not Available	613	Open in IMG/M
3300030294\|Ga0311349_11197171	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300031232\|Ga0302323_100016571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6329	Open in IMG/M
3300031235\|Ga0265330_10152515	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300031879\|Ga0306919_11341476	Not Available	541	Open in IMG/M
3300031890\|Ga0306925_10163302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2399	Open in IMG/M
3300031918\|Ga0311367_10769860	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031939\|Ga0308174_10079081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2307	Open in IMG/M
3300031946\|Ga0310910_11173772	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300032160\|Ga0311301_10773599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1327	Open in IMG/M
3300032261\|Ga0306920_100150472	All Organisms → cellular organisms → Bacteria	3467	Open in IMG/M
3300032770\|Ga0335085_10030227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7561	Open in IMG/M
3300032770\|Ga0335085_10113178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3478	Open in IMG/M
3300032770\|Ga0335085_10246885	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300032770\|Ga0335085_10288023	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300032770\|Ga0335085_10371345	All Organisms → cellular organisms → Bacteria → Acidobacteria	1669	Open in IMG/M
3300032770\|Ga0335085_10405217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1581	Open in IMG/M
3300032770\|Ga0335085_10550520	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300032770\|Ga0335085_10913751	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300032770\|Ga0335085_12094913	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300032770\|Ga0335085_12580579	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032782\|Ga0335082_10058885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3933	Open in IMG/M
3300032782\|Ga0335082_10071968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3497	Open in IMG/M
3300032782\|Ga0335082_10446854	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300032782\|Ga0335082_10556812	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300032782\|Ga0335082_11695910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	506	Open in IMG/M
3300032783\|Ga0335079_10098300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3320	Open in IMG/M
3300032783\|Ga0335079_10177294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2377	Open in IMG/M
3300032783\|Ga0335079_10525181	All Organisms → cellular organisms → Bacteria → Acidobacteria	1259	Open in IMG/M
3300032783\|Ga0335079_10533216	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300032783\|Ga0335079_10772009	Not Available	998	Open in IMG/M
3300032783\|Ga0335079_11551048	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300032783\|Ga0335079_12388010	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300032805\|Ga0335078_10530443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1504	Open in IMG/M
3300032828\|Ga0335080_10029724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5960	Open in IMG/M
3300032829\|Ga0335070_10529626	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300032829\|Ga0335070_10760249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	903	Open in IMG/M
3300032829\|Ga0335070_11192521	Not Available	699	Open in IMG/M
3300032829\|Ga0335070_11264265	Not Available	676	Open in IMG/M
3300032893\|Ga0335069_12152442	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300032893\|Ga0335069_12684679	Not Available	512	Open in IMG/M
3300032955\|Ga0335076_10354996	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300032955\|Ga0335076_11247931	Not Available	628	Open in IMG/M
3300033158\|Ga0335077_10130504	All Organisms → cellular organisms → Bacteria → Acidobacteria	2908	Open in IMG/M
3300033158\|Ga0335077_10160887	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2564	Open in IMG/M
3300033158\|Ga0335077_11089124	Not Available	790	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.14%
Host-Associated	Host-Associated	1.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.35%
Aquatic	Environmental → Aquatic	34.78%
Plants	Host-Associated → Plants	1.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.01%
Freshwater	Environmental → Aquatic → Freshwater	33.54%
Peat	Environmental → Terrestrial → Peat	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.24%
Marine	Environmental → Aquatic → Marine	0.62%
Sediment	Environmental → Aquatic → Sediment	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.62%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	33.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	32.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.35%
Loam	Environmental → Terrestrial → Soil → Loam	3.11%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.24%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	31.06%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	30.43%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.11%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.86%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.24%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	27.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	21.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	11.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	5.59%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.11%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.86%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.24%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.62%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.62%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.62%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.62%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001404	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026057	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20181J14860_10014474	3300001404	Arctic Peat Soil	MTGSVALKAAYIVTWVIQLGYLGYLLSRYRKVREEMKDLNRSS*
JGI26339J46600_100104442	3300003218	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLASLWRRFRRVRAEMKDLER*
JGI26339J46600_100309933	3300003218	Bog Forest Soil	MTGPVALKAAYIVTWVILAGYLGSLLRRFRRVREEMKDLERSS*
JGI26339J46600_100381562	3300003218	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLSSLLRRFRRVREEMKDLKRSG*
JGI26339J46600_100908152	3300003218	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLGSLLRRFRRVREEMKDLKRSS*
JGI26339J46600_100953201	3300003218	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLKRSS*
JGI26339J46600_100970552	3300003218	Bog Forest Soil	MTGPVALKAAYIVTWVILVGYLGSLLRRFRRVREEMKDLNRSS*
JGI26341J46601_100614203	3300003219	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLER*
JGI26341J46601_101805562	3300003219	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRHVREEMKDLKR
JGI26343J46809_10195211	3300003223	Bog Forest Soil	MTGPVALKVAYIVTWVVLLGYLGSLWRRFRRVREEMRDLK
JGI26340J50214_101922372	3300003368	Bog Forest Soil	MTGAVALKAAYAVTVVIELGYVWFLIGRYRQLRKEMKDLKRSS*
JGI24140J50213_100464381	3300003369	Arctic Peat Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLKRGG*
JGI24140J50213_100843361	3300003369	Arctic Peat Soil	MTGAVALKAAYIVVWVLELGYVAYLVSRYRKVREEMKDLKRSS*
Ga0062385_100138774	3300004080	Bog Forest Soil	MTGPVALKVAYIVTWVVLLGYLGSLWRRFRRVREEMRDLKR*
Ga0062385_100269462	3300004080	Bog Forest Soil	MTGPVALKAAYIFTWVIFLGYLGSLLRRFRRIREEMNDLKRKG*
Ga0062387_1013401822	3300004091	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMRDLKRPS*
Ga0062387_1015910922	3300004091	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLGSLWRRFRRLREEMKDLKHNHRA*
Ga0062389_1042199702	3300004092	Bog Forest Soil	MTGPVALKAAYIVTWVILAGYLGSLLRRFRRVREEMKDLKREG*
Ga0062386_1001233643	3300004152	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLKRL*
Ga0062386_1004457441	3300004152	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLGSLWRRFRRVREEMRDLKR*
Ga0062386_1004745802	3300004152	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLFRRFRRVREEMKDLKRSS*
Ga0062386_1006251172	3300004152	Bog Forest Soil	MTGPVALKAAYIATWVIQLGYLAYLLGRYRKVREEMKDLKRSS*
Ga0062386_1009377233	3300004152	Bog Forest Soil	VALKAAYLVTWVVLLGYLGSLWRRFRRVREEMRELKRSE*
Ga0062386_1014372192	3300004152	Bog Forest Soil	GPVALKAAYIVTWVILGGYLGSLLRRFRRVREEVKDLKRNSKI*
Ga0062386_1016262601	3300004152	Bog Forest Soil	MTGPVALKAAYIVTWVILLWYLGSLWRRFRRVREEMKDLKRSS*
Ga0062386_1018558741	3300004152	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLSSLLRRFRRVREEMKDLKRNPQT*
Ga0062388_1001655582	3300004635	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRHVREEMKDLKRSS*
Ga0069004_102598671	3300005219	Natural And Restored Wetlands	MKGDVALKAAYIVTWVIQLSYMGYLWSRFRRLREEQKDLKREVGL*
Ga0070739_103146752	3300005532	Surface Soil	VKGEVALKAAYVATWVIQLGYMGYLWSRFRRVREEQKDLKRGR*
Ga0068856_1013005341	3300005614	Corn Rhizosphere	RCAMKGDTALKLAYVVTWVIQFGYIGYLVSRYKRIREEMKDLQRGR*
Ga0068856_1015553782	3300005614	Corn Rhizosphere	VKGDTALRAAYIVTWVIQLGYIGYLWSRFRRVREEQRDLKREAGR*
Ga0066903_1072900002	3300005764	Tropical Forest Soil	MTGPVALKAAYIVTWLVLLGYLSSLWRRFRRVREETKELKRNSSVV*
Ga0070766_100006299	3300005921	Soil	MTGPVALKAAYVVTWVIELGYLWYLLGRYRRVRREMKDLKRSS*
Ga0066789_104545812	3300005994	Soil	MSGAVALKAAYIVTWVIQLGYLAYLLSRYRRVREEMKDLKRSS*
Ga0097691_100004219	3300006055	Arctic Peat Soil	MTGPVALKAAYVVTWAIQFGYLGYLLSRYRKVREEMKDLKRSS*
Ga0075030_1009300532	3300006162	Watersheds	AYIVTWVILLGYLGSLLRRFRRVREEMKDLKRSS*
Ga0075521_100000747	3300006642	Arctic Peat Soil	MSGAVALKAAYIVTWVIQLGYLGYLLGRYRKVREEMKDLKRSS*
Ga0075521_100065677	3300006642	Arctic Peat Soil	MTGPVALKAAYIVTWVILLGYLGSLFRRFRRVREEMKDLKRGG*
Ga0075521_102655472	3300006642	Arctic Peat Soil	LKAAYIVTWVIQLGYLGYLLSRYRKVREEMKDLNRSS*
Ga0075521_103182232	3300006642	Arctic Peat Soil	MTGPVALKAAYIVTWVIQLGYLAYLLGRYRKVREEMKDLKRSS*
Ga0075520_12668152	3300006795	Arctic Peat Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRLRRVREEMKDLKRGG*
Ga0066793_101677993	3300009029	Prmafrost Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDFKRGG*
Ga0116216_105598591	3300009698	Peatlands Soil	MTGPVALKAAYIATWVILLGYLGSLLRRFRRIREEMNDLKRKG*
Ga0126373_114312112	3300010048	Tropical Forest Soil	MNGVVALKAAYIVTWVVQLLYLRYLLMRFRRVRREMNDLKRHS*
Ga0074046_104594802	3300010339	Bog Forest Soil	MTGLVALKAAYIVTWVTLLGYLGSLLRRFRRVREEMKDLKRNPRI*
Ga0074046_107531552	3300010339	Bog Forest Soil	MTGPVALKAAYIVTWVILAGYLGSLLRRFRRVREEMKDLNRS*
Ga0074046_108478712	3300010339	Bog Forest Soil	MTGPVALRAAYIVTWAILLGYLGSLLRRFRRVREEMKDLKRSS*
Ga0074045_100071965	3300010341	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLQRFRRIREEMNDLKRKG*
Ga0074045_100864534	3300010341	Bog Forest Soil	MTGPVALKAAYIVTWAILAGYLGSLLRRFRRVRDEMKDLKRRE*
Ga0074045_101217971	3300010341	Bog Forest Soil	PVALKAAYIVTWVVLLGYLGSLLRRFRRVREEMKDLKRGS*
Ga0074045_101580692	3300010341	Bog Forest Soil	MTGPVALKAAYIFTWVILLGYLGSLLRRFRRIREELKDLKRSS*
Ga0074044_102915093	3300010343	Bog Forest Soil	MTGPVALKAAYIVTWAILVGYLGSLLRRFRRVRDEMKDLKRRE*
Ga0074044_102927792	3300010343	Bog Forest Soil	PVALKAAYTVTWVVLLGYLGSLWRRFRRVREEMKDLKQSG*
Ga0134125_122157752	3300010371	Terrestrial Soil	VKGDVALKAAYIVTWVIQLGYMGYLWSRFKRVRAEQKDLKREGQ*
Ga0126381_1043744561	3300010376	Tropical Forest Soil	MKGDVALKAAYIATWVIQLGYMGYLWGRFKRVREEQKALERG*
Ga0136449_10000843417	3300010379	Peatlands Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRIREEMNDLKRKG*
Ga0136449_1026503691	3300010379	Peatlands Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRQVREEMKDL
Ga0181532_101817852	3300014164	Bog	MTGPVALKAAYIVTWAVLLGYLGSLWRRFRRVREEMTDLKRNS*
Ga0182024_121261662	3300014501	Permafrost	MTGPVALKAAYIVTWVILLGYLGSLLRRFQRVREEMRDLKRGK*
Ga0181511_11259982	3300016702	Peatland	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVRQEMKDLKRSS
Ga0187856_13057281	3300017925	Peatland	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLKRGG
Ga0187819_101206262	3300017943	Freshwater Sediment	MTGPVALKAAYIVTWVVLLGYLASLLRRFRLVRDEMKDLKRSA
Ga0187817_101124552	3300017955	Freshwater Sediment	MTGPVALKAAYIVTWVVLLGYLASLLRRFRRVRDEMKDLKRSET
Ga0187817_104273092	3300017955	Freshwater Sediment	MTGPVALKAAYIVTWVVLLGYLGSLLRRFRRVREEMKDLKRST
Ga0187783_100061918	3300017970	Tropical Peatland	MTGAVALKAAYIVTWVVLLGYLGSLWRRFRRVREEMERLKRP
Ga0187781_103864432	3300017972	Tropical Peatland	MTGPVALKAAYLSTWVILLGYLGSLLQRFRHTQEEMKDLKRSS
Ga0187780_109588192	3300017973	Tropical Peatland	MNGITALKLAYAVVWIIQLGYIGYLVSRFKRVREEMRDLKRGG
Ga0187876_10035737	3300018003	Peatland	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDFKRGG
Ga0187784_103292992	3300018062	Tropical Peatland	MTGPVALKAAYVVTWVVLLGYLTSLIRRFRRVREEIKDLKRSE
Ga0187771_113206862	3300018088	Tropical Peatland	MTGPVALKAAYIVTWVILLGYLGSLWRRFRRVREEMRDLKRSQ
Ga0210393_110782561	3300021401	Soil	MTGAVALKAAYVVTWAIELGYLWYLLGRYRRVRREMKDLKRSS
Ga0210391_102086723	3300021433	Soil	MTGPVALKAAYIVTWLILLGYLGSLLRRFRRVRAEMKDLQREK
Ga0126371_122934072	3300021560	Tropical Forest Soil	MNGVVALKAAYIVTWVVQLLYLRYLLMRFRRVRREMNDLKRHS
Ga0224558_10443732	3300023090	Soil	MTGPVALKAAYIVTWVILLGYLGLLLRRFRRVREEMKDLKRGE
Ga0208077_10040334	3300025427	Arctic Peat Soil	MTGSVALKAAYIVTWVIQLGYLGYLLSRYRKVREEMKDLNRSS
Ga0208850_10768322	3300025457	Arctic Peat Soil	MSGAVALKAAYIVTWVIQLGYLGYLLGRYRKVREEMKDLKRSS
Ga0208079_10039945	3300025481	Arctic Peat Soil	MTGPVALKAAYIVTWVILLAYLGSLLRRFRRVREEMKDLKRGG
Ga0207927_10080975	3300025579	Arctic Peat Soil	MSGAVALKAAYIVTWVIQLGYLAYLLSRYRRVREEMKDLKRSS
Ga0207927_10202943	3300025579	Arctic Peat Soil	MTGPVALKAAYVVTWAIQFGYLGYLLSRYRKVREEMKDLKRSS
Ga0207927_10347612	3300025579	Arctic Peat Soil	MTGPVALKAAYIVTWAILLGYLGSLLRRFRRVREEMKDFKRGG
Ga0207930_10321062	3300025604	Arctic Peat Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRLRRVREEMKDLKRGG
Ga0209385_10013732	3300025650	Arctic Peat Soil	MTGPVALKAAYIVTWVILLGYLGSLFRRFRRVREEMKDLKRGG
Ga0209584_101696262	3300025878	Arctic Peat Soil	LKAAYIVTWVIQLGYLGYLLSRYRKVREEMKDLNRSS
Ga0209584_103617962	3300025878	Arctic Peat Soil	MTGPVALKAAYIVTWVIQLGYLAYLLGRYRKVREEMKDLKRSS
Ga0208294_10401452	3300026057	Natural And Restored Wetlands	MKGDVALKAAYIVTWVIQLSYMGYLWSRFRRLREEQKDLKREVGL
Ga0209904_10039223	3300027394	Thawing Permafrost	MTGPVALKTAYIVTWVILLGYLGSLLRRFRRVREEMKDFKRGG
Ga0207826_10947882	3300027680	Tropical Forest Soil	MSGPVALKAAYIVTWVVLGGYLASLLSRFRQVREEMTNMKRNMKT
Ga0209446_10046515	3300027698	Bog Forest Soil	MTGPVALKAAYIFTWVILLGYLGSLLRRFRRIREEMNDLKRKG
Ga0209446_10061324	3300027698	Bog Forest Soil	MTGPVALKVAYIVTWVVLLGYLGSLWRRFRRVREEMRDLKR
Ga0207862_11078941	3300027703	Tropical Forest Soil	MTGPVALKAAYIVTWVVLLGYLGSLLRRFRRVREEM
Ga0209448_100030694	3300027783	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRHVREEMKDLKRSS
Ga0209656_1000594111	3300027812	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLASLWRRFRRVRAEMKDLER
Ga0209656_100114179	3300027812	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRREREEMRDLKRS
Ga0209656_100315545	3300027812	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLGSLWRRFQRVREEMKDLKRQL
Ga0209656_100635385	3300027812	Bog Forest Soil	MTGAVALKAAYAVTVVIELGYVWFLIGRYRQLRKEMKDLKRSS
Ga0209656_100881173	3300027812	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLER
Ga0209656_100975562	3300027812	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLFRRFRRVREEMKDLKRSS
Ga0209656_101144342	3300027812	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLKRGS
Ga0209656_101231634	3300027812	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLGSLWRRFRRVREEMRDLKR
Ga0209656_103012792	3300027812	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMNDLKRSS
Ga0209656_105072732	3300027812	Bog Forest Soil	VTGPVALKAAYIVTWVVLLGYLASLLRRFRRLREE
Ga0209040_1001009510	3300027824	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLKRS
Ga0209040_102252423	3300027824	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLGSLWRRLRHVREEMRDLKRNS
Ga0209040_102454131	3300027824	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLSSLLRRFRRVREEMKALKR
Ga0209040_105378871	3300027824	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLGSLWRRFRRVREEM
Ga0209039_100311975	3300027825	Bog Forest Soil	MTGPVALKAAYIVTWVVLLGYLSSLLRRFRRVREEMKDLKRSG
Ga0209039_102005542	3300027825	Bog Forest Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDLKRL
Ga0209039_102295311	3300027825	Bog Forest Soil	MTGPVALKAAYIVTWVILAGYLGSLLRRFRRVREEMKDLERSS
Ga0209039_103340062	3300027825	Bog Forest Soil	MTGPVALKAAYIVTWVILAGYLGSLLRRFRRVREEMKDLNRS
Ga0209380_100092867	3300027889	Soil	MTGPVALKAAYVVTWVIELGYLWYLLGRYRRVRREMKDLKRSS
Ga0209048_103862482	3300027902	Freshwater Lake Sediment	MTGPEALKAAYIVTWVVLLGYLGTLVSRFRKVREEIKDLKRNP
Ga0209048_109255112	3300027902	Freshwater Lake Sediment	MTGSVALKAAYIVTWVIQLGYLGYLLSRYRKVREEMKDLKRSS
Ga0209415_105006262	3300027905	Peatlands Soil	GPVALKAAYIVTWVILLGYLGSLLRRFRRVREEMKDFKRGG
Ga0302166_100688132	3300028652	Fen	MTGAVALKAAYIVVWVILLGYVAYLVGRYRRVHEEMKDLKRSS
Ga0302166_101093422	3300028652	Fen	MTGVVALKAAYIVVWVILLGYVAYLVGRYRRVREEIKDLKRSS
Ga0302205_101424761	3300028739	Fen	TGAVALKAAYIVVWVILLGYVAYLVGRYRRVHEEMKDLKRSS
Ga0311349_111971712	3300030294	Fen	MTGAVALKAAYIVVWVIMLGYVAYLVSRYRRVREEIKDLKRSS
Ga0302323_1000165718	3300031232	Fen	MTGAVALKAAYIVVWVILLGYVAYLVGRYRRVREEIKDLKRSS
Ga0265330_101525152	3300031235	Rhizosphere	MTGAVALKAAYTVTWVVLLGYLGSLLSRFRRTREEMRDLKRNP
Ga0306919_113414762	3300031879	Soil	MTGPVALKAAYIVTWVILFGYLGSLLRRFRRVREETRDLKRIS
Ga0306925_101633023	3300031890	Soil	MKGIVALKVAYIATWVIQLGYIGYLFSRYKRVREEIKDLKRGS
Ga0311367_107698601	3300031918	Fen	MTGAVALKAAYIVVWVILLGYVAYLVGRYRRGHEEMKDLKRSS
Ga0308174_100790814	3300031939	Soil	VKGDVALKAAYIVTWVIQLGYMGYLWSRFKRVREEQKDLRRGG
Ga0310910_111737721	3300031946	Soil	MTGAVALKAAYIVTWLILLGYLGSLVGRFRRVREEMKDLKRER
Ga0311301_107735991	3300032160	Peatlands Soil	MTGPVALKAAYIVTWVILLGYLGSLLRRFRRIREEMNDLKRKG
Ga0306920_1001504725	3300032261	Soil	SAREPTMKGIVALKVAYIATWVIQLGYIGYLFSRYKRVREEIKDLKRGS
Ga0335085_100302272	3300032770	Soil	MSGATALKAAYVVTWIVLGGYLGSLFSRFRRIRQEMQDLKRG
Ga0335085_101131783	3300032770	Soil	MKGEFALKLAYTVTWIIQLGYIGYLVSRYKRVCEEMKDLKRTGE
Ga0335085_102468853	3300032770	Soil	MSGAVALRAAYIVTWAILLGYLGYLFSRFRRVREEMKDLKR
Ga0335085_102880231	3300032770	Soil	AAYIVTWVIQLGYMGYLWSRFRRVREEQKDLKRGK
Ga0335085_103713453	3300032770	Soil	MKGQFALKLAYTVTWVIQLGYIAYLLSRFKRVREELKDFDRGK
Ga0335085_104052173	3300032770	Soil	MKGDVALKAAYIVTWVIQLGYMGYLWSRFRRVREEQKDLKRGK
Ga0335085_105505203	3300032770	Soil	LKLAYIMTWVIQGGYIVYLFSRFKRVREEQKDLKRKR
Ga0335085_109137511	3300032770	Soil	MKGDTALKAAYIVTWVIQLGYMGYLWSRFKRVRAEQRDLRRGL
Ga0335085_120949131	3300032770	Soil	MTGAVALKAAYIVTWVILLGYLGSLVGRFRRAREEMKDL
Ga0335085_125805791	3300032770	Soil	MKGLFALKLAYVMTWVIQGGYIVYLVGRFKRVREELKELERGK
Ga0335082_100588856	3300032782	Soil	MTGAVALKAAYIVTWVILLGYLGSLVGRFRRAREEMKDLKRGK
Ga0335082_100719684	3300032782	Soil	MKGPFALKLAYIMTWVIQGGYIVYLVGRFKRVREELKELERGK
Ga0335082_104468541	3300032782	Soil	MKGAVALKAAYIVTWVIQLGYMGYLWSRFRRVREEQKDLKR
Ga0335082_105568122	3300032782	Soil	MKGLFALKLAYIMTWVIQGGYMVYLVSRFKRVREEQKDLKRER
Ga0335082_116959102	3300032782	Soil	MKGDTALKLAYVVTWVIQLGYIGYLVSRYKRVREEIKDLQRER
Ga0335079_100983002	3300032783	Soil	MTGPIALKSAYIVTWIILAGYLGSLRRRFCRMREEMKDLKRTA
Ga0335079_101772944	3300032783	Soil	MKGDTALKLAYAAVWIIQFSYIGYLLSRYRRVREEQRDLKRQAGRGS
Ga0335079_105251813	3300032783	Soil	MTGAVALKAAYIVTWVVLLGYLGSLWQRFRRVRAETKELKRMP
Ga0335079_105332162	3300032783	Soil	MTGPVALKAAYIVTWVVVLGYLGSLLRRFQRVREEMKDLKRSL
Ga0335079_107720092	3300032783	Soil	MTGPVALKSAYIVTWIILAGYLGSLQRRFRRMREEMKDLKRTA
Ga0335079_115510482	3300032783	Soil	MTGAVALKAAYIVTWVILAGYLGSLLRRFRRVREEMKDLKRSA
Ga0335079_123880101	3300032783	Soil	MTGVTALKAAYIVTWVIQLGYIGYLFSRFKRVREEMRDLKR
Ga0335078_105304433	3300032805	Soil	MTGPVALKAAYIVTWVVVLGYLGSLLRRFQRVREEMKDLKRSH
Ga0335080_100297246	3300032828	Soil	MTGAVALKAAYIVTWVILAGYLASLLRRFRRVRDEMKDLKRSA
Ga0335070_105296262	3300032829	Soil	MNGITALKLAYAVTWIIQLGYIGYLVSRFRRVREEMKDLKRGG
Ga0335070_107602493	3300032829	Soil	MKGLFALKLAYIMTWVIQGGYMVYLVSRFKRVREEQKDLKRE
Ga0335070_111925212	3300032829	Soil	MKGLLALKLAYAVTWVIHLGYIGYLFNRFQRVREELKDFDRGK
Ga0335070_112642652	3300032829	Soil	MKAGFALNLAYLVTWVIQLGYIGYLVSRFKRVREEMKDLKRESNA
Ga0335069_121524422	3300032893	Soil	MTGPVALKAAYIVTWVVLLGYLGSLLRRFRQVREELKD
Ga0335069_126846792	3300032893	Soil	MKGLFALKLAYVVTWVIQLGYIGYLLSRFKRVREELKDFERGK
Ga0335076_103549962	3300032955	Soil	MKGDVALKAAYIVTWVIQLGYMGYLWSRFRRVREEQKDLKRGGQ
Ga0335076_112479311	3300032955	Soil	LKAAYIVTWVIQLGYMGYLWSRFRRVREEQKDLKRGK
Ga0335077_101305043	3300033158	Soil	MTGAVALKAAYIVTWVVLLGYLGSLLRRFRRVREEMKDLKRTS
Ga0335077_101608872	3300033158	Soil	MKGLFALKLAYIMTWVIQGGYIVYLFSRFKRVREEQKDLKRKR
Ga0335077_110891242	3300033158	Soil	GRGAMTGPIALKSAYIVTWIILAGYLGSLRRRFCRMREEMKDLKRTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040936

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences