NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F040926

Metagenome / Metatranscriptome Family F040926

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F040926
Family Type Metagenome / Metatranscriptome
Number of Sequences 161
Average Sequence Length 73 residues
Representative Sequence MDDAVPAERPPEQQRSRGHVLTPRRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKT
Number of Associated Samples 122
Number of Associated Scaffolds 161

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 76.40 %
% of genes near scaffold ends (potentially truncated) 27.95 %
% of genes from short scaffolds (< 2000 bps) 86.96 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (49.689 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.391 % of family members)
Environment Ontology (ENVO) Unclassified
(30.435 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.615 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 42.00%    β-sheet: 0.00%    Coil/Unstructured: 58.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 161 Family Scaffolds
PF00313CSD 4.97
PF00150Cellulase 4.97
PF14333DUF4389 2.48
PF14572Pribosyl_synth 1.86
PF12728HTH_17 1.86
PF02559CarD_CdnL_TRCF 1.86
PF01479S4 1.24
PF10604Polyketide_cyc2 1.24
PF14534DUF4440 1.24
PF08448PAS_4 1.24
PF00211Guanylate_cyc 1.24
PF00578AhpC-TSA 1.24
PF08666SAF 1.24
PF00196GerE 1.24
PF07885Ion_trans_2 0.62
PF03928HbpS-like 0.62
PF14026DUF4242 0.62
PF08240ADH_N 0.62
PF07883Cupin_2 0.62
PF06197DUF998 0.62
PF11742DUF3302 0.62
PF04531Phage_holin_1 0.62
PF00589Phage_integrase 0.62
PF01909NTP_transf_2 0.62
PF07978NIPSNAP 0.62
PF04995CcmD 0.62
PF02163Peptidase_M50 0.62
PF00174Oxidored_molyb 0.62
PF04542Sigma70_r2 0.62
PF14373Imm_superinfect 0.62
PF13349DUF4097 0.62
PF00795CN_hydrolase 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 161 Family Scaffolds
COG2730Aryl-phospho-beta-D-glucosidase BglC, GH1 familyCarbohydrate transport and metabolism [G] 4.97
COG3934Endo-1,4-beta-mannosidaseCarbohydrate transport and metabolism [G] 4.97
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 1.24
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.62
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.62
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.62
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.62
COG3114Heme exporter protein DIntracellular trafficking, secretion, and vesicular transport [U] 0.62
COG3371Uncharacterized membrane proteinFunction unknown [S] 0.62
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.62
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.62
COG5546Uncharacterized membrane proteinFunction unknown [S] 0.62


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.31 %
UnclassifiedrootN/A49.69 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459015|G14TP7Y01BAAIQNot Available586Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105668648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium777Open in IMG/M
3300000956|JGI10216J12902_101705344Not Available1109Open in IMG/M
3300000956|JGI10216J12902_101810987Not Available684Open in IMG/M
3300000956|JGI10216J12902_102877513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium4200Open in IMG/M
3300001431|F14TB_102353178Not Available925Open in IMG/M
3300003324|soilH2_10117075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4941Open in IMG/M
3300003324|soilH2_10201122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1583Open in IMG/M
3300004114|Ga0062593_100099677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2043Open in IMG/M
3300004114|Ga0062593_100679913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales999Open in IMG/M
3300004479|Ga0062595_100300744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M141081Open in IMG/M
3300004643|Ga0062591_100030476All Organisms → cellular organisms → Bacteria2804Open in IMG/M
3300004643|Ga0062591_100319782Not Available1234Open in IMG/M
3300005093|Ga0062594_100207587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1375Open in IMG/M
3300005093|Ga0062594_101724617Not Available656Open in IMG/M
3300005093|Ga0062594_103238628All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter piechaudii511Open in IMG/M
3300005330|Ga0070690_101371295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia568Open in IMG/M
3300005331|Ga0070670_100018893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5911Open in IMG/M
3300005331|Ga0070670_100148325All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2030Open in IMG/M
3300005332|Ga0066388_102602407Not Available921Open in IMG/M
3300005334|Ga0068869_100080680All Organisms → cellular organisms → Bacteria2427Open in IMG/M
3300005340|Ga0070689_100789426Not Available834Open in IMG/M
3300005347|Ga0070668_100957455All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300005354|Ga0070675_100250077Not Available1551Open in IMG/M
3300005354|Ga0070675_101709885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium580Open in IMG/M
3300005356|Ga0070674_100437384All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300005356|Ga0070674_102122544Not Available513Open in IMG/M
3300005366|Ga0070659_100976390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium743Open in IMG/M
3300005441|Ga0070700_100415800All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300005456|Ga0070678_102100206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia535Open in IMG/M
3300005459|Ga0068867_100291938All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300005459|Ga0068867_101132216Not Available716Open in IMG/M
3300005471|Ga0070698_100588519All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300005543|Ga0070672_101646300Not Available576Open in IMG/M
3300005616|Ga0068852_102682564Not Available517Open in IMG/M
3300005713|Ga0066905_100106033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1922Open in IMG/M
3300005713|Ga0066905_102184063Not Available516Open in IMG/M
3300005764|Ga0066903_100248420All Organisms → cellular organisms → Bacteria2741Open in IMG/M
3300005764|Ga0066903_102802750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia946Open in IMG/M
3300005764|Ga0066903_108511594Not Available523Open in IMG/M
3300006049|Ga0075417_10435044Not Available653Open in IMG/M
3300006573|Ga0074055_11091199Not Available519Open in IMG/M
3300006575|Ga0074053_11009029Not Available711Open in IMG/M
3300006575|Ga0074053_11639050Not Available530Open in IMG/M
3300006577|Ga0074050_11660886Not Available618Open in IMG/M
3300006581|Ga0074048_12998945Not Available592Open in IMG/M
3300006605|Ga0074057_10049028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium827Open in IMG/M
3300006844|Ga0075428_101002913Not Available884Open in IMG/M
3300006845|Ga0075421_100421968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1598Open in IMG/M
3300006852|Ga0075433_10237407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1618Open in IMG/M
3300006852|Ga0075433_11472685Not Available588Open in IMG/M
3300006871|Ga0075434_101369972Not Available718Open in IMG/M
3300006904|Ga0075424_102195490Not Available581Open in IMG/M
3300009012|Ga0066710_101614323Not Available993Open in IMG/M
3300009094|Ga0111539_10083464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3757Open in IMG/M
3300009094|Ga0111539_11709785Not Available730Open in IMG/M
3300009098|Ga0105245_10060650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3407Open in IMG/M
3300009098|Ga0105245_10067241All Organisms → cellular organisms → Bacteria3245Open in IMG/M
3300009147|Ga0114129_10535549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1525Open in IMG/M
3300009147|Ga0114129_12774304All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
3300009147|Ga0114129_13322337Not Available520Open in IMG/M
3300009156|Ga0111538_10470026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1594Open in IMG/M
3300009162|Ga0075423_10085842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3284Open in IMG/M
3300009177|Ga0105248_12363870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium605Open in IMG/M
3300009801|Ga0105056_1055198Not Available564Open in IMG/M
3300009817|Ga0105062_1084827Not Available613Open in IMG/M
3300010397|Ga0134124_10306299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1482Open in IMG/M
3300010403|Ga0134123_11204695All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300011119|Ga0105246_10092153All Organisms → cellular organisms → Bacteria2186Open in IMG/M
3300011119|Ga0105246_10672878Not Available904Open in IMG/M
3300011412|Ga0137424_1017277Not Available1060Open in IMG/M
3300011412|Ga0137424_1052079Not Available752Open in IMG/M
3300011440|Ga0137433_1185271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium679Open in IMG/M
3300012356|Ga0137371_10385520All Organisms → Viruses → Predicted Viral1087Open in IMG/M
3300012902|Ga0157291_10169841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia665Open in IMG/M
3300012951|Ga0164300_10194591Not Available988Open in IMG/M
3300012951|Ga0164300_10803233Not Available583Open in IMG/M
3300012957|Ga0164303_10743424Not Available667Open in IMG/M
3300012958|Ga0164299_11375297Not Available544Open in IMG/M
3300012961|Ga0164302_10534880Not Available835Open in IMG/M
3300012984|Ga0164309_11083271Not Available665Open in IMG/M
3300012985|Ga0164308_10206863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1500Open in IMG/M
3300013308|Ga0157375_10911059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1023Open in IMG/M
3300014968|Ga0157379_10095056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2674Open in IMG/M
3300015077|Ga0173483_10054560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1540Open in IMG/M
3300015200|Ga0173480_10139717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1225Open in IMG/M
3300015371|Ga0132258_10571596All Organisms → cellular organisms → Bacteria → Terrabacteria group2835Open in IMG/M
3300015371|Ga0132258_11214968All Organisms → cellular organisms → Bacteria1905Open in IMG/M
3300015371|Ga0132258_12733588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1231Open in IMG/M
3300015371|Ga0132258_13097780All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300015372|Ga0132256_100792894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1064Open in IMG/M
3300015372|Ga0132256_103218681Not Available549Open in IMG/M
3300015373|Ga0132257_102432624Not Available680Open in IMG/M
3300017965|Ga0190266_10000625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6019Open in IMG/M
3300017965|Ga0190266_10816015Not Available601Open in IMG/M
3300018031|Ga0184634_10168312Not Available989Open in IMG/M
3300018067|Ga0184611_1209299Not Available693Open in IMG/M
3300018073|Ga0184624_10029362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli2117Open in IMG/M
3300018073|Ga0184624_10039358Not Available1867Open in IMG/M
3300018073|Ga0184624_10095948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1264Open in IMG/M
3300018073|Ga0184624_10518011Not Available517Open in IMG/M
3300018078|Ga0184612_10515063Not Available581Open in IMG/M
3300018081|Ga0184625_10288058Not Available859Open in IMG/M
3300018081|Ga0184625_10294602Not Available848Open in IMG/M
3300018083|Ga0184628_10496863Not Available631Open in IMG/M
3300018469|Ga0190270_10018290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4241Open in IMG/M
3300018481|Ga0190271_13441688Not Available530Open in IMG/M
3300019356|Ga0173481_10416421Not Available662Open in IMG/M
3300019356|Ga0173481_10654946Not Available561Open in IMG/M
3300020016|Ga0193696_1026242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1560Open in IMG/M
3300021081|Ga0210379_10229268All Organisms → cellular organisms → Bacteria → Terrabacteria group804Open in IMG/M
3300021082|Ga0210380_10422969Not Available610Open in IMG/M
3300022756|Ga0222622_10651522Not Available763Open in IMG/M
3300022756|Ga0222622_11223016All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300022893|Ga0247787_1010396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1152Open in IMG/M
3300022898|Ga0247745_1076116Not Available557Open in IMG/M
3300025904|Ga0207647_10181837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1221Open in IMG/M
3300025908|Ga0207643_10012564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4575Open in IMG/M
3300025908|Ga0207643_10039943All Organisms → cellular organisms → Bacteria2640Open in IMG/M
3300025920|Ga0207649_10798031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia737Open in IMG/M
3300025936|Ga0207670_10123018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1889Open in IMG/M
3300025937|Ga0207669_10441618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1029Open in IMG/M
3300025937|Ga0207669_11112297Not Available667Open in IMG/M
3300025937|Ga0207669_11476766All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300025945|Ga0207679_11033328Not Available753Open in IMG/M
3300025972|Ga0207668_10125230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1953Open in IMG/M
3300026075|Ga0207708_11214658Not Available659Open in IMG/M
3300026089|Ga0207648_10794984Not Available880Open in IMG/M
3300026121|Ga0207683_10183223Not Available1899Open in IMG/M
3300027056|Ga0209879_1036295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria813Open in IMG/M
3300027277|Ga0209846_1047839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium660Open in IMG/M
3300027561|Ga0209887_1045524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium959Open in IMG/M
3300027873|Ga0209814_10249963Not Available769Open in IMG/M
3300027909|Ga0209382_11002120Not Available871Open in IMG/M
3300027909|Ga0209382_11064864Not Available838Open in IMG/M
3300027935|Ga0209870_103842Not Available709Open in IMG/M
3300027952|Ga0209889_1091267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium614Open in IMG/M
3300028597|Ga0247820_11331309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300028708|Ga0307295_10093260Not Available807Open in IMG/M
3300028712|Ga0307285_10146071Not Available646Open in IMG/M
3300028722|Ga0307319_10052201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli1284Open in IMG/M
3300028754|Ga0307297_10329720Not Available555Open in IMG/M
3300028755|Ga0307316_10313830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium574Open in IMG/M
3300028803|Ga0307281_10384417All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14535Open in IMG/M
3300028809|Ga0247824_10943427All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300028814|Ga0307302_10254755All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium860Open in IMG/M
3300028824|Ga0307310_10130994Not Available1143Open in IMG/M
3300028885|Ga0307304_10063101Not Available1404Open in IMG/M
3300031170|Ga0307498_10258458Not Available634Open in IMG/M
3300031226|Ga0307497_10369504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria677Open in IMG/M
3300031562|Ga0310886_10066346Not Available1693Open in IMG/M
3300031720|Ga0307469_11648346Not Available617Open in IMG/M
3300031740|Ga0307468_102142164Not Available539Open in IMG/M
3300031847|Ga0310907_10303267Not Available805Open in IMG/M
3300031944|Ga0310884_10088883Not Available1487Open in IMG/M
3300032075|Ga0310890_10385075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1036Open in IMG/M
3300032075|Ga0310890_11007915Not Available670Open in IMG/M
3300032516|Ga0315273_10247258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2430Open in IMG/M
3300033550|Ga0247829_11058480Not Available674Open in IMG/M
3300033551|Ga0247830_10809080Not Available746Open in IMG/M
3300034176|Ga0364931_0301753Not Available531Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.39%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.56%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.97%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.73%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.73%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.48%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.48%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.86%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.24%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.24%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.24%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.24%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.24%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.24%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.24%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.24%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.62%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.62%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.62%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.62%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459015Litter degradation PV4EngineeredOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009801Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011412Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4EnvironmentalOpen in IMG/M
3300022898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027056Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027277Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027935Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4PV_006168202170459015Switchgrass, Maize And Mischanthus LitterMTDPMPAERVPPQQHSPRAQVLTPRRIAAVIGLVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS
INPhiseqgaiiFebDRAFT_10566864823300000364SoilMPGCTMDDAVLETQRTLDQRSRRRHVLTPRRIAAVIALAVLAVSLRRHLRFARDVFRHRRRLKLAVTVLVLLRQLRKT*
JGI10216J12902_10170534433300000956SoilMDDAVAAERHPEPQSARGHVLTPRRIAAVVALALLAVRLRRHIRFARDVFRHRRRLKLAFTVLVLLRQLRKREF*
JGI10216J12902_10181098713300000956SoilMDDATPAEHLPEPQRSRAHALTPRRVAAVIALALLVVSLRRQLRFARDVFRHRRRLKLAFTVLVLLRHLRKS*
JGI10216J12902_10287751343300000956SoilMNDPIPAERLPEPQRSRGGVLTPRRIAAVIALALLAVSLRRQLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
F14TB_10235317813300001431SoilMFSCRLEMPERSPSADAVLETQRTLDQRSRRRHVLTPRRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLA
soilH2_1011707523300003324Sugarcane Root And Bulk SoilMDDPMPAERVPPQPNSHQGILTPRRIAAIVGLIVLAVSLRRHLRFARDVFRHRRRLKLAVTLLVFLRQLRKS*
soilH2_1020112223300003324Sugarcane Root And Bulk SoilMDAPVHEQEHAPAQGTRRGHVLTPRRVAAVIGLVVLVVSLRRQLRFARDVLRHRRRLKLAFTILVLLRQLRRS*
Ga0062593_10009967713300004114SoilMRCVDADPAKLGGPPEQRRPRGHVLSPRRVAVVVAFALLAVSLRRHIRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0062593_10067991323300004114SoilMHYVDADPAKLRRPPEEQRRRGHALSPRHVAAVLAFALLVFSLRRHLRFAREVFRHRRRLKLAFTVLVLLRQLRKT*
Ga0062595_10030074423300004479SoilMDDATPAEHLPEPQRSRGHSLTPRRIAALIALAVLVVSLRRQLRFARDVFRHRRRLKLAFTVLMLLRQLRRS*
Ga0062591_10003047633300004643SoilMRCVDADPAKLGGPPEQRRPRGHVLSPRRVAVVVAFALLAVSLRRHIRFARDVFRHRRRLKLAFTILVLLRQLRKT*
Ga0062591_10031978223300004643SoilMDDAVPAERAPELQRSRRPVLTTRRVAAVVALVLLAVSLRRNLRFARDVVRHRRRLKLAFTVLVLLRQLRKS*
Ga0062594_10020758743300005093SoilMDVSDPAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0062594_10172461713300005093SoilCRQLSGRMDCMDADPAKRPPSEQQQRPRGHVVTPRRVAVAVALALLVVSFRRHLRFARDVLRHRRRLRLAFTVLMLLRQLRNR*
Ga0062594_10323862813300005093SoilMNDPMPAQRVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS*
Ga0070690_10137129513300005330Switchgrass RhizosphereMTDPMPAERVPPQQHSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0070670_10001889383300005331Switchgrass RhizosphereMTDPMPAERVPPQQHSPRAQVLTPRRIAAVIGLVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0070670_10014832523300005331Switchgrass RhizosphereMDDAGLETPRTPEQGRRRGHVLTPRRIAAVVAVALLVVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKR*
Ga0066388_10260240723300005332Tropical Forest SoilMEDAIERRPPEQRRFREHLLTPRRIAAVVALVLLVFSLRRHLRFARDVVRHRRRLKLAFTVLVLLRQLRKS*
Ga0068869_10008068063300005334Miscanthus RhizosphereMTDPMPAERVPPQQRSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0070689_10078942623300005340Switchgrass RhizosphereMDDAVEAERHPEPKRSRGHILTPRRIAAVVALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRHLRKS*
Ga0070668_10095745523300005347Switchgrass RhizosphereAMNDPMPAQRVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS*
Ga0070675_10025007723300005354Miscanthus RhizosphereMDADPAKRPPSEQQQRPRGHVVTPRRVAVAVALALLVVSFRRHLRFARDVLRHRRRLRLAFTVLVLLRQLRNR*
Ga0070675_10170988523300005354Miscanthus RhizosphereQQHSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0070674_10043738413300005356Miscanthus RhizosphereMNDPMPAERVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS*
Ga0070674_10212254423300005356Miscanthus RhizosphereMDDFEAANRSAPEQELRRAPVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0070659_10097639013300005366Corn RhizosphereMTDPMPAERVPPQQRSPRAQVLTPRRIAAVIGVVVLSVSLRRQLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0070700_10041580033300005441Corn, Switchgrass And Miscanthus RhizosphereDPAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0070678_10210020613300005456Miscanthus RhizospherePPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS*
Ga0068867_10029193833300005459Miscanthus RhizospherePAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0068867_10113221613300005459Miscanthus RhizosphereMDADAAKRPPPELQQRSRGHVVTPRRVAVAVALALLVVSFRRHLRFARDVLRHRRRLRLAFTVLVLLRQLRNR*
Ga0070698_10058851923300005471Corn, Switchgrass And Miscanthus RhizosphereMDDAGLETPRTPEQASRRGHVLTPRRIAAVVAVALLVVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKR*
Ga0070672_10164630023300005543Miscanthus RhizosphereMDVSDPAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQL
Ga0068852_10268256423300005616Corn RhizosphereMTDPMPAERVPPQQRSPRAQVLTPRRIAAVIGLVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0066905_10010603333300005713Tropical Forest SoilMSDPILEARPAGPARRRRHVLTARRAAAFIALLVLAVSLRRQVRFARDLIRHRRRLRLAFSLLVLLRQMRRS*
Ga0066905_10218406313300005713Tropical Forest SoilMDDPVPAQRLPPQQERSRRHVLTPRRIAAVIGLAALVFILRRPLGFARDVFRHRRRLKLVFTLLVLLRQVRKS*
Ga0066903_10024842033300005764Tropical Forest SoilMSDPILEPRPAGTARTRGHVMTARRAAALIALLVLALSLRRHVRFVRDLVRHRRRLRLAFTLLVLLRQLRKS*
Ga0066903_10280275013300005764Tropical Forest SoilMDHVTTPAQPPIPEEPDRRSRVLTPRRLAAAVAVLVLVLSLRRHLRFVRDVVRHRRRLRLAFTLLVLLRQLRKS*
Ga0066903_10851159413300005764Tropical Forest SoilMEYVGRQRSSAQPSARRRVLTPRRLAAVLALALLAISFRQHLRALRDVYRHRRRLKLAFTLL
Ga0075417_1043504423300006049Populus RhizosphereMDDGVLETQRTTEQPRRRGHVLTPRRIAAVVAVALLVVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKR*
Ga0074055_1109119913300006573SoilMDDAVLEEQPPHHGHALTPRRIAAVVGLAVLAVTLRRRIRFVRDVFKHRRKLKLAFAVLMLLRRLRKA
Ga0074053_1100902923300006575SoilMDDAVPAERAPELQRSRGAVLTTRRVAAAIALVLLAVTLRRNLRFARDVFRHRRRLKLAFTVLVLLRQLRKN*
Ga0074053_1163905013300006575SoilMDDAVLEEQPPHHGHALTPRRIAAVVGLAVLAVTLRRRIRFVRDVFKHRRKLKLAFAVLMLLRRLRKA*
Ga0074050_1166088613300006577SoilMDDAVLEEQPPHHGHALTPRRIAAVVGLAVLAVTLRRRIRFVRDVFKHRRKLKLAFAVLMLLHRLRKA*
Ga0074048_1299894513300006581SoilMDDAVPAERPPEQQRSRGHVLTPRRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKT*
Ga0074057_1004902823300006605SoilMDTDPLKPSEQQRRPGGRVVTPRRIAAVVALVLLAVSFRRHLRFARDVVRHRRRLKLAFTVLVLLRQLRNR*
Ga0075428_10100291323300006844Populus RhizosphereMDDAGPAMRRPPEQKSHGRVLSPRRIAAVVALALLVVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRRR*
Ga0075421_10042196823300006845Populus RhizosphereVDADPAKLRGAPEQRRPRGHVLSPRRVAVVVALALLAVGLRRHLRFARDVFRHRRRLKLAFAVLVFLRQLRKT*
Ga0075433_1023740723300006852Populus RhizosphereVDDAVEAERHPEPKRSRGHILTPRRIAAVVALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVILRQLRKREF*
Ga0075433_1147268513300006852Populus RhizosphereIASLLTVRAYALSPRAQRLAGCAGMDDATPAEHLPEPQRSRGHALTPRRIAAVIALAVLVVSLRRQLRFARDVFRYRRRLKLAFTVLVLLRQLRKS*
Ga0075434_10136997213300006871Populus RhizosphereAVEAERHPEPKRSRRHALTPRRIAAVVALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVILRQLRKREF*
Ga0075424_10219549013300006904Populus RhizosphereLLTVRAYALSPRAQRLAGCAGMDDATPAEHLPEPQRSRGHALTPRRIAAVIALAVLVVSLRRQLRFARDVFRYRRRLKLAFTVLVLLRQLRKS*
Ga0066710_10161432313300009012Grasslands SoilMDDAIIEERPPEQPSRRAHILTPRRIAAVLALVLLAVGLGRHFRFARNVFRHRRRLQLVFSVLLFLRQLRKT
Ga0111539_1008346433300009094Populus RhizosphereVDADPAKLRGAPEQRRPRGHVLSPRRVAVVVALAVLAVGLRRHLRFARDVFRHRRRLKLAFTVLVFLRQLRKT*
Ga0111539_1170978513300009094Populus RhizosphereMDDAVIEEHPPRHRHALTPRRIAAVIAMVVLAVTLRRHLRFAGNVFRHRRRLKLAFTVLMLLRHLRKA*
Ga0105245_1006065053300009098Miscanthus RhizosphereMDVSDPAERRAPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0105245_1006724113300009098Miscanthus RhizospherePMPAERVPPQQRSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0114129_1053554933300009147Populus RhizosphereMNDPMPAERVPPQQQRPRTRVLTPRRIAAVVGLVVLVVGLTRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS*
Ga0114129_1277430413300009147Populus RhizosphereDSSASSTLSFSAVRAMAGCVAMDDADLAKRRPPERRSRGHALTPRRIAAVIALGLLVVSLRRYLRFARDVFRHRRRLKLAFTVLVLLRRLRKS*
Ga0114129_1332233713300009147Populus RhizosphereMDDAVIEEHPPRHRHALTPRRIAAVIAMAVLAVTLRRHLRFAGNVFRHRRRLKLAFT
Ga0111538_1047002613300009156Populus RhizosphereMDDAVIEEHPPRHRHALTPRRIAAVIAMAVLAVTLRRHLRFAGNVFRHRRRLKLAFTVL
Ga0075423_1008584243300009162Populus RhizosphereMDDAVEAERHPEPKRSRRHALTPRRIAAVVALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVILRQLRKREF*
Ga0105248_1236387023300009177Switchgrass RhizosphereMTDPMLAERVPPQQHSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0105056_105519813300009801Groundwater SandMGNAILETQRTPEQPSSRGHVLTPRRIAAVIVLAVLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0105062_108482723300009817Groundwater SandMGNAILETQRTPEQPSSRGHVLTPRRIAAVIALAVLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKT*
Ga0134124_1030629923300010397Terrestrial SoilMTDPMPSERVPSQQHSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0134123_1120469513300010403Terrestrial SoilDALDMDVSDPAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0105246_1009215343300011119Miscanthus RhizosphereMDVADPAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0105246_1067287823300011119Miscanthus RhizosphereMNDPMPAERVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0137424_101727713300011412SoilMDDAVPAKRPPPELQRLRGHVLTPRRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0137424_105207923300011412SoilMDDAVPAERLPKPQKSRRHVLTPRRIVAAIAVALLAFSLRRHLGFARDVFRHRRRLKLAFTVLVFLRQLRRT*
Ga0137433_118527133300011440SoilMDDDVPAKRPPEQRRPLAHVLTPRRIAAVIALVLLAFRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0137371_1038552023300012356Vadose Zone SoilMGDAIIEERPPEQPSRRALVLTPRRIAAVLALVLLAVGLRRHFRFARNVFRHRRRLQLAFSVLLFLRQLRKT*
Ga0157291_1016984123300012902SoilAMNDPMPAERVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS*
Ga0164300_1019459133300012951SoilMDDAVRAERPPESQRSRRHALTPRRVAAVVALALLAVSLRRQLRFARDVFRHRRRLKLAFTVLMLLRQLRRREF*
Ga0164300_1080323313300012951SoilDGEDAQARPGRILSFSTIRTMAGCAGMDDAAPAEHLPEPQRSRGHSLTPRRVAAVIALAVVVVSLRRQLRFARDVFRHRRRLRLAFTVLVLLRQLRKS*
Ga0164303_1074342413300012957SoilMDDATPAEHLPEPQRSRGHSLTPQRVAAVIALAVVVVSLRRQLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0164299_1137529713300012958SoilMDDAAPAEHLPEPQRSRGHSLTPRRVAAVIALAVVVVSLRRQLRFARDVFRHRRRLRLAFTVLVLLRQLRKS*
Ga0164302_1053488023300012961SoilMDDATPAELLPEPQRSRGHSLTPRRVAAVIALAVVVVSLRRQLRFARDVFRHRRRLRLAFTVLVLLRQLRKS*
Ga0164309_1108327123300012984SoilMDDATPAELLPEPQRSRGHSLTPRRVAAVIALAVLVVSLRRQLRFARDVFRHRRRLRLAFTVLVLLRQLRKS*
Ga0164308_1020686343300012985SoilLAGCAGMDTDPLKPSEQQRRPGGRVVTPRRIAAVVALVLLAVSFRRHLRFARDVVRHRRRLKLAFTVLVLLRQLRNR*
Ga0157375_1091105923300013308Miscanthus RhizosphereDDAVEAERHPEPKRSRGHVLTPRRIAAVVALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVILRQLRKREF*
Ga0157379_1009505623300014968Switchgrass RhizosphereMTDPMPAERVPSQQHSPRAQVLTPRRIAAVIGLVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS*
Ga0173483_1005456013300015077SoilMRCVDADPAKLGGPPEQRRPRGHVLSPRRVAVVVAFALLAVSLRRHIRFARDVFRHRRRLKLAFTILVLL
Ga0173480_1013971723300015200SoilMTDPMPAERVPPHQQRPRTHVLTPRRIAAVIGLVVLAVSLRRHLRFARDVVRHRRRLKLAFTLLVFLRQLRKS*
Ga0132258_1057159643300015371Arabidopsis RhizosphereMDDAVEAERHPEPERSRGHVLTPRRIAAVVALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVILRQLRKREF*
Ga0132258_1121496843300015371Arabidopsis RhizosphereMDAGPAKRRSPEQQRSRGHVLTFRRIVAVIALGLLAVSFRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0132258_1273358823300015371Arabidopsis RhizosphereMDDASIEERPPEQPSRRAHALTPRRIAAALALVLLAVGLRRHFRFARDVFRHRRRLKLAFSVLLVLRRLRKS*
Ga0132258_1309778033300015371Arabidopsis RhizosphereMDDAVHSEHRPESQRSRGHFLTPRRVAAVAALVLLAVSLRRQFRFARDVFRNRRRLKLAFTVLVLLRQLRRR*
Ga0132256_10079289423300015372Arabidopsis RhizosphereMDDAVRAERPPESQRSRGHLLTPRRVAAVVALALVAVSLRRQFRFARDVIRNRRRLKLAFTVLVLLRQLRRREF*
Ga0132256_10321868123300015372Arabidopsis RhizosphereMDDAVRAERPPESQRSRGRVLTPRRVAAVVALALVAVSLRRQFRFARDVFRNRRRLKLAFTVLVLLRQLRRR*
Ga0132257_10243262413300015373Arabidopsis RhizosphereMNDPVPPEHLPESQRSRGHVLTPRRVAAVIALALLAVSLRRRLRFARDVFRHRRRLKLAFTVLVLLRQLRKS*
Ga0190266_1000062523300017965SoilMDDAVPAERPPEPPRSRGHGLTPRRIAAVIALALLAFRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKT
Ga0190266_1081601523300017965SoilAVSAERPPEQLRSRGHGLTPRRIAAVIALALLVVRLRRHLRFVRDVFRHRRRLKLAFTVLVLLRRLRKS
Ga0184634_1016831213300018031Groundwater SedimentMDDAVPAEHPPEPQRSRGHVLTPRRIAAVIAVALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0184611_120929913300018067Groundwater SedimentMADAVRETQPTQEQLGRRGHVLTPRRIAAVIALALLAVSLRRHLRFARDVVRHRRRLKLAFTVLMLLRQLR
Ga0184624_1002936223300018073Groundwater SedimentMDDAVPAERPPEPQRSRAHVLTPRRIAAVIAVALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0184624_1003935823300018073Groundwater SedimentMDDAVFGTQPTPEQPTRRGHVLTPRRIAAVIALAVLAVTLRRHLRFARNVFRHRRQLKLALTVLMLLRHLRKA
Ga0184624_1009594813300018073Groundwater SedimentPWKRRFIGANRAMAGCAAMADAVRETQPTQEQLGRRGHVLTPRRIAAVIALALLAVSLRRHLRFARDVVRHRRRLKLAFTVLMLLRQLRRS
Ga0184624_1051801113300018073Groundwater SedimentMDPAVPAERPAKQRSRGNVLTPRRVAAVIALAVLAVSLRRHLRVARDVFRHRQRLKLAFTVLVLLRQLRKS
Ga0184612_1051506323300018078Groundwater SedimentLSFSTIQAMAGWSAMDDAVPAKRPPEQRRPLEHVLTPRRIAAVIAMVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVFLRQLRKS
Ga0184625_1028805813300018081Groundwater SedimentMDDAVPAKRRPPEQQRPRAHVLTPRRIAAVIALALLAVSLRRHLRFARDIFRHRRRLKLAFTVLVLLRQVRKS
Ga0184625_1029460213300018081Groundwater SedimentMDDADATKRRPPEQQRRRGHVLTPRRIAAVIALAVLAVTLRRHLRFARNVFRHRRRLKLAFTVLMLLRHLRKA
Ga0184628_1049686313300018083Groundwater SedimentMDDADATKRRPPEQQRRRGHVLTPRRIAAVVALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLMLLRHLRKA
Ga0190270_1001829053300018469SoilMSHLRAGAMAGCAAVDDALPPKRPSEERSPRERVLTPRRIAAVIAVVLLAVRLRRQLRFARDVFGHRRRLKLAFTVLVFLRQLRKS
Ga0190271_1344168813300018481SoilMDDTVLETKRTLDQPSRRGHVLTPRRFAAVIACALLAVSLKRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0173481_1041642123300019356SoilMTDPMPAERVPPQQQRPRTRVLTPRRIAAVIGLVVLAVSLRRHLRFARDVVRHRRRLKLAFTLLVFLRQLRKS
Ga0173481_1065494623300019356SoilMNDPMPAERVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTVLVFLRQLRKS
Ga0193696_102624233300020016SoilMEDAVSAERPPEQLSSRGHGLTPRRIAAVIALALLVVRLRRHLRFVRDVFRHRRRLKLAFTVLVLLRRLRKS
Ga0210379_1022926843300021081Groundwater SedimentMDDAVPAKRRPPEQQRPREHVLTPRRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0210380_1042296923300021082Groundwater SedimentMDDAVLEEQPPRRVHVLTPRRIALIALALLAVTLGRRLRFARNVFRYRRQLKLAVTVLMLLRHLRKA
Ga0222622_1065152213300022756Groundwater SedimentMDDAVPPERRPPEQQRSRGHVLTPRRIAAVIALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLV
Ga0222622_1122301623300022756Groundwater SedimentMDDADPAKRPPEQQRPRGHVLTPRRIAAVIALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQL
Ga0247787_101039623300022893SoilMNDPMPAQRVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS
Ga0247745_107611623300022898SoilMNDPMPAQRVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVF
Ga0207647_1018183713300025904Corn RhizosphereMTDPMPAERVPSQQHSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS
Ga0207643_1001256453300025908Miscanthus RhizosphereMDDAGLETPRTPEQGRRRGHVLTPRRIAAVVAVALLVVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKR
Ga0207643_1003994343300025908Miscanthus RhizosphereMDVSDPAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0207649_1079803123300025920Corn RhizosphereMTDPMPAERVPPQQHSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS
Ga0207670_1012301823300025936Switchgrass RhizosphereMTDPMPAERVPPQQRSPRAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS
Ga0207669_1044161823300025937Miscanthus RhizosphereMNDPMPAERVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS
Ga0207669_1111229723300025937Miscanthus RhizosphereMTDPMPAERVPPQQHSARAQVLTPRRIAAVIGVVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS
Ga0207669_1147676613300025937Miscanthus RhizosphereAMDDFEAANRSAPEQELRRAPVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0207679_1103332823300025945Corn RhizosphereMTDPMPAERVPPQQRSPRAQVLTPRRIAAVIGLVVLAVSLRRHLRFARDVFRHRRRLKLAFTLLVFLRQLRKS
Ga0207668_1012523013300025972Switchgrass RhizosphereAMNDPMPAQRVPPQQQRPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS
Ga0207708_1121465813300026075Corn, Switchgrass And Miscanthus RhizosphereVADPAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0207648_1079498423300026089Miscanthus RhizosphereMDADAAKRPPPELQQRSRGHVVTPRRVAVAVALALLVVSFRRHLRFARDVLRHRRRLRLAFTVLVLLRQLRNR
Ga0207683_1018322333300026121Miscanthus RhizosphereMDSAVPAERAPELQRSRRPVLTTRHVAAVVALVLLAVSLRRNLRFARDVFRHRRRLKLAFTVLVLLRHLRKS
Ga0209879_103629513300027056Groundwater SandMDDAVPAGRPPEPQRFRGHVLTPRRIAAVIALVVLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKT
Ga0209846_104783913300027277Groundwater SandMAGCAAVDDADPAKRRPQEQQKAREHVLTPRRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0209887_104552413300027561Groundwater SandMGNAVLETQRTPGQPSSRGHVLTPRRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0209814_1024996323300027873Populus RhizosphereMDDAGPATRRPPEQKSHGRVLSPRRIAAVVALALLVVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0209382_1100212013300027909Populus RhizosphereMDDAVPAERLPEPQKSRRHVLTPRRIVAVIAVALLAFSLRRHLGFARDVFRHRRRLKLALTVLVFLRQLRRT
Ga0209382_1106486423300027909Populus RhizosphereMDDAGPAMRRPPEQKSHGRVLSPRRIAAVVALALLVVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRRR
Ga0209870_10384213300027935Groundwater SandMAGCAAMDDAIPAKRRPPEQRGSRGHVLTPRRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0209889_109126713300027952Groundwater SandMGNAVLETQRTPGQPSSRGHVLTPRRIAAVIALVVLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0247820_1133130923300028597SoilMDNAVLETQPTPEQPSSRGHVLTPRSIVAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRRT
Ga0307295_1009326023300028708SoilMDDAVRAEGPPEPQRSRGHVLTPGRIAAVIALALLAVSFRRHLRFARDVFKHRRRLKLAFSVLGLLMAVLSPAC
Ga0307285_1014607113300028712SoilMDDAVPAERPPEPQSSRGHVLTPRRIAALIALAVLAVSLGRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0307319_1005220123300028722SoilMDDAVPAEHPPEPQRSRGHVLTPRRIAAVFAVALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0307297_1032972013300028754SoilMEDPVSAERPPEQLRSRGHGLTPRRIAAVIALALLVVRLRRHLRFVRDVFRHRRRLKLAFTVLVLLRRLRKS
Ga0307316_1031383023300028755SoilMDDAVPAERPREPQRSRRHVLTPRRIAAVIALALLAVSLRRHLRFGRDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0307281_1038441713300028803SoilEQQTSRGHVLTPRRIAAVIALALLAVSLRRHLRFARNVFRHRRRLKLAFTVLVLLRQLRR
Ga0247824_1094342723300028809SoilMRYVDADPAKLRPPPEQQRRRGHVLSPRRVAAVVAFALLALSLRRHLRFAREVFRHRRRLRLAFTVLVLLRQLRKT
Ga0307302_1025475523300028814SoilMDDAVLETQPTPEQPSRRGHVLTPRRIAAVIALALLAVTLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKA
Ga0307310_1013099423300028824SoilFSAMRAMAGCAAMDDAVPPERRPPEQQRSRGHVLTPRRIAAVIALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0307304_1006310123300028885SoilMDDAVPPERRPPEQQRSRGHVLTPRRIAAAIALALLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0307498_1025845823300031170SoilMDETVPAERPPEQRRPREHVLTPRRIAAVIAVVLLAVTLKRQLRFARDVFRHRRRLKLAFTV
Ga0307497_1036950423300031226SoilMDDTVPAERPPEQRRPREHVLTPRRIAAVIAVVLLAVTLKRQLRFARDVLRHRRRLKLAFTVLVLLRQLRKS
Ga0310886_1006634643300031562SoilMNDPMPAERVPPQQERPRTRVLTPRRIAAVVGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS
Ga0307469_1164834613300031720Hardwood Forest SoilMGADPAQQRSPEQQRPRGHGLTPRRIAAAIALVLLAVRLRRHLGFARDVFRHRRRLKLAFAVLVLLRQLRKS
Ga0307468_10214216423300031740Hardwood Forest SoilMDDAVPAERAPELQRSRRPVLTTRRVAAVVALALLTVSIRRNLRFARDVFRHRRRLKLAFTVLVLLRQLRKT
Ga0310907_1030326713300031847SoilMNDPMPAERVPPQQQRPRTRVLTPRRIAAVAGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRK
Ga0310884_1008888313300031944SoilMNDPMPAERVPPQQRPRTRVLTPRRIAAVAGLVVLVVSLRRQLRFARDVVRHRRRLKLAFTLLVFLRQLRKS
Ga0310890_1038507533300032075SoilADPAKLRPPPEQQRRRGHVLSPRRVAAVVAFALLALSLRRHLRFAREVFRHRRRLRLAFTVLVLLRQLRKT
Ga0310890_1100791513300032075SoilRRSGRGRMRSAMDVADPAKRRPPKQERHRERVLTPRRIAVVVGLVLLAFSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0315273_1024725813300032516SedimentMEDAVLEPQRTPEQPSRRGHVLTPWRIAAVIALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLALLRQLRKS
Ga0247829_1105848023300033550SoilMDVADPAERRPPDEERPRAHVLTPRRIAAVVALVLLAVRLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRKS
Ga0247830_1080908013300033551SoilVAPIRAMAGCGAMDDAVPPKRRPPEQQRPRGHVLTPRRIAAVLALALLAVSLRRHLRFARDVFRHRRRLKLAFTVLVLLRQLRRT
Ga0364931_0301753_77_2953300034176SedimentMDDAVPAKRPSERRRPRAHVLTPRRIAAVIAVVLLAVRLKGQLRFARDVFRHRRRLKLAFTVLVFLRQLRKS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.