NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F040884

Metagenome / Metatranscriptome Family F040884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F040884
Family Type Metagenome / Metatranscriptome
Number of Sequences 161
Average Sequence Length 46 residues
Representative Sequence MSSNGNGLGNGKNGKKRRRRILWAAIAVVVLGGGGYGVKAALS
Number of Associated Samples 131
Number of Associated Scaffolds 161

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.14 %
% of genes near scaffold ends (potentially truncated) 98.76 %
% of genes from short scaffolds (< 2000 bps) 91.30 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (69.565 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(35.404 % of family members)
Environment Ontology (ENVO) Unclassified
(36.025 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.994 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 43.66%    β-sheet: 0.00%    Coil/Unstructured: 56.34%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 161 Family Scaffolds
PF00702Hydrolase 22.36
PF13840ACT_7 6.21
PF00069Pkinase 3.73
PF02687FtsX 3.11
PF08282Hydrolase_3 3.11
PF04945YHS 1.24
PF01433Peptidase_M1 1.24
PF12704MacB_PCD 0.62
PF12779WXXGXW 0.62
PF13533Biotin_lipoyl_2 0.62
PF00872Transposase_mut 0.62
PF07676PD40 0.62
PF02452PemK_toxin 0.62
PF13474SnoaL_3 0.62
PF03932CutC 0.62
PF02583Trns_repr_metal 0.62
PF03965Penicillinase_R 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 161 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 14.91
COG0560Phosphoserine phosphataseAmino acid transport and metabolism [E] 3.11
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 3.11
COG1877Trehalose-6-phosphate phosphataseCarbohydrate transport and metabolism [G] 3.11
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 3.11
COG3769Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamilyCarbohydrate transport and metabolism [G] 3.11
COG0308Aminopeptidase N, contains DUF3458 domainAmino acid transport and metabolism [E] 1.24
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.62
COG1937DNA-binding transcriptional regulator, FrmR familyTranscription [K] 0.62
COG2337mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin moduleDefense mechanisms [V] 0.62
COG3142Copper homeostasis protein CutCInorganic ion transport and metabolism [P] 0.62
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.62
COG3682Transcriptional regulator, CopY/TcrY familyTranscription [K] 0.62


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.57 %
UnclassifiedrootN/A30.43 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000550|F24TB_15684192Not Available553Open in IMG/M
3300001593|JGI12635J15846_10050034All Organisms → cellular organisms → Bacteria3193Open in IMG/M
3300001593|JGI12635J15846_10789233All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300002557|JGI25381J37097_1070873All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300004092|Ga0062389_104884879Not Available505Open in IMG/M
3300005176|Ga0066679_11020420Not Available514Open in IMG/M
3300005177|Ga0066690_10557153All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300005178|Ga0066688_10600247All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300005179|Ga0066684_10014365All Organisms → cellular organisms → Bacteria3952Open in IMG/M
3300005187|Ga0066675_10076264All Organisms → cellular organisms → Bacteria2149Open in IMG/M
3300005445|Ga0070708_101426946Not Available645Open in IMG/M
3300005468|Ga0070707_101230123Not Available715Open in IMG/M
3300005549|Ga0070704_101005080Not Available754Open in IMG/M
3300005555|Ga0066692_10495389All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005569|Ga0066705_10914980All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300005764|Ga0066903_101442842All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300005877|Ga0075296_1030009All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005937|Ga0081455_10776456Not Available603Open in IMG/M
3300005993|Ga0080027_10396556Not Available556Open in IMG/M
3300006050|Ga0075028_100977590Not Available525Open in IMG/M
3300006163|Ga0070715_10640737Not Available628Open in IMG/M
3300006172|Ga0075018_10665424Not Available560Open in IMG/M
3300006173|Ga0070716_101674263Not Available524Open in IMG/M
3300006796|Ga0066665_10762255All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300006914|Ga0075436_100507342All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300007265|Ga0099794_10700050All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300007788|Ga0099795_10211057All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300009038|Ga0099829_10210687Not Available1575Open in IMG/M
3300009038|Ga0099829_10278128All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300009038|Ga0099829_10645147All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300009088|Ga0099830_10139938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis1852Open in IMG/M
3300009089|Ga0099828_10081100All Organisms → cellular organisms → Bacteria2769Open in IMG/M
3300009089|Ga0099828_10973035All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300009090|Ga0099827_10121661All Organisms → cellular organisms → Bacteria → Proteobacteria2103Open in IMG/M
3300009090|Ga0099827_10243683All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300009098|Ga0105245_12667453Not Available553Open in IMG/M
3300009143|Ga0099792_11264042All Organisms → cellular organisms → Bacteria → Proteobacteria503Open in IMG/M
3300010048|Ga0126373_10333533All Organisms → cellular organisms → Bacteria1524Open in IMG/M
3300010048|Ga0126373_12571747Not Available567Open in IMG/M
3300010159|Ga0099796_10549291All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum519Open in IMG/M
3300010326|Ga0134065_10187215All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300010343|Ga0074044_11162972Not Available503Open in IMG/M
3300010359|Ga0126376_12307085Not Available584Open in IMG/M
3300010362|Ga0126377_11942607Not Available664Open in IMG/M
3300010376|Ga0126381_104755117All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300010398|Ga0126383_11234636All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300011269|Ga0137392_10563460All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300011270|Ga0137391_11441338Not Available534Open in IMG/M
3300011271|Ga0137393_10836502Not Available786Open in IMG/M
3300012189|Ga0137388_10130854All Organisms → cellular organisms → Bacteria → Proteobacteria2198Open in IMG/M
3300012199|Ga0137383_10556529All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300012199|Ga0137383_10736120Not Available720Open in IMG/M
3300012200|Ga0137382_10063643All Organisms → cellular organisms → Bacteria2343Open in IMG/M
3300012200|Ga0137382_11204838All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300012201|Ga0137365_10959210All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300012203|Ga0137399_11288421All Organisms → cellular organisms → Bacteria → Acidobacteria614Open in IMG/M
3300012203|Ga0137399_11348112All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300012207|Ga0137381_10484983All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300012349|Ga0137387_10587608All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300012357|Ga0137384_10864514Not Available729Open in IMG/M
3300012357|Ga0137384_11520927All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300012359|Ga0137385_10345324All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300012359|Ga0137385_10765054All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300012359|Ga0137385_11222371All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300012361|Ga0137360_11471800Not Available585Open in IMG/M
3300012361|Ga0137360_11782314Not Available521Open in IMG/M
3300012362|Ga0137361_10313923All Organisms → cellular organisms → Bacteria → Acidobacteria1435Open in IMG/M
3300012362|Ga0137361_10318372All Organisms → cellular organisms → Bacteria → Acidobacteria1425Open in IMG/M
3300012362|Ga0137361_11527807Not Available589Open in IMG/M
3300012363|Ga0137390_10598582Not Available1070Open in IMG/M
3300012363|Ga0137390_11060892Not Available760Open in IMG/M
3300012683|Ga0137398_10027827All Organisms → cellular organisms → Bacteria → Proteobacteria3162Open in IMG/M
3300012683|Ga0137398_11071387All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300012922|Ga0137394_10082193All Organisms → cellular organisms → Bacteria → Acidobacteria2696Open in IMG/M
3300012923|Ga0137359_10183537All Organisms → cellular organisms → Bacteria → Proteobacteria1868Open in IMG/M
3300012923|Ga0137359_10451032All Organisms → cellular organisms → Bacteria1138Open in IMG/M
3300012923|Ga0137359_11278245All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300012925|Ga0137419_11401689All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300012927|Ga0137416_10701692All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300012927|Ga0137416_11912253All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300012930|Ga0137407_11613002All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300012944|Ga0137410_12014204All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300012971|Ga0126369_11899475All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300015053|Ga0137405_1337612Not Available1202Open in IMG/M
3300016270|Ga0182036_11114149All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300016294|Ga0182041_10136282All Organisms → cellular organisms → Bacteria1870Open in IMG/M
3300016319|Ga0182033_10414856All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300016357|Ga0182032_11109828All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300016404|Ga0182037_10885245Not Available774Open in IMG/M
3300016422|Ga0182039_10215084All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300016422|Ga0182039_11652584Not Available585Open in IMG/M
3300017972|Ga0187781_10341402All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA61065Open in IMG/M
3300018468|Ga0066662_11990967Not Available608Open in IMG/M
3300019866|Ga0193756_1054055All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300021046|Ga0215015_10081532Not Available663Open in IMG/M
3300021432|Ga0210384_11514375All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300021559|Ga0210409_10433453All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1173Open in IMG/M
3300024288|Ga0179589_10004160All Organisms → cellular organisms → Bacteria3749Open in IMG/M
3300024330|Ga0137417_1289052All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300025905|Ga0207685_10299119Not Available796Open in IMG/M
3300026217|Ga0209871_1111391All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300026310|Ga0209239_1095289All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300026314|Ga0209268_1109815All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300026318|Ga0209471_1226257All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300026333|Ga0209158_1103709All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300026374|Ga0257146_1050064Not Available677Open in IMG/M
3300026523|Ga0209808_1255525All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300026532|Ga0209160_1126568All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300026555|Ga0179593_1118315All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2496Open in IMG/M
3300026824|Ga0207723_107858All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300027562|Ga0209735_1125237All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300027629|Ga0209422_1121446All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300027671|Ga0209588_1096269All Organisms → cellular organisms → Bacteria → Acidobacteria953Open in IMG/M
3300027674|Ga0209118_1181209All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300027846|Ga0209180_10183951All Organisms → cellular organisms → Bacteria1206Open in IMG/M
3300027846|Ga0209180_10355485All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300027846|Ga0209180_10577660Not Available623Open in IMG/M
3300027862|Ga0209701_10529299All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300027867|Ga0209167_10707080All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300027869|Ga0209579_10043744All Organisms → cellular organisms → Bacteria2400Open in IMG/M
3300028047|Ga0209526_10639542All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300028047|Ga0209526_10911025All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300028138|Ga0247684_1035482Not Available797Open in IMG/M
3300029944|Ga0311352_10205397All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1677Open in IMG/M
3300030013|Ga0302178_10413436All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300030842|Ga0075404_11168976All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300030991|Ga0073994_12042071All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300031057|Ga0170834_107141551Not Available537Open in IMG/M
3300031122|Ga0170822_11657030All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300031128|Ga0170823_11060293All Organisms → cellular organisms → Bacteria → Acidobacteria900Open in IMG/M
3300031474|Ga0170818_102114162All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300031474|Ga0170818_115274907Not Available649Open in IMG/M
3300031736|Ga0318501_10675728All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300031744|Ga0306918_10166289All Organisms → cellular organisms → Bacteria1641Open in IMG/M
3300031771|Ga0318546_10595358All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300031777|Ga0318543_10354776All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300031778|Ga0318498_10558460Not Available502Open in IMG/M
3300031820|Ga0307473_10202159Not Available1181Open in IMG/M
3300031820|Ga0307473_11327464Not Available539Open in IMG/M
3300031823|Ga0307478_11564624Not Available545Open in IMG/M
3300031879|Ga0306919_11221633Not Available571Open in IMG/M
3300031896|Ga0318551_10425258All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300031910|Ga0306923_10066159All Organisms → cellular organisms → Bacteria4024Open in IMG/M
3300031941|Ga0310912_10225426Not Available1437Open in IMG/M
3300031945|Ga0310913_11226803Not Available521Open in IMG/M
3300031947|Ga0310909_10598127All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300032035|Ga0310911_10089320All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300032035|Ga0310911_10340301All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300032039|Ga0318559_10254745All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300032042|Ga0318545_10059079All Organisms → cellular organisms → Bacteria1307Open in IMG/M
3300032051|Ga0318532_10088798All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300032059|Ga0318533_10331415Not Available1107Open in IMG/M
3300032059|Ga0318533_10407108All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300032060|Ga0318505_10275163All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300032060|Ga0318505_10294419All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300032067|Ga0318524_10633002Not Available564Open in IMG/M
3300032076|Ga0306924_10239411All Organisms → cellular organisms → Bacteria2084Open in IMG/M
3300032180|Ga0307471_102943891All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300032180|Ga0307471_103862852Not Available530Open in IMG/M
3300032261|Ga0306920_100749758Not Available1436Open in IMG/M
3300033158|Ga0335077_11370507All Organisms → cellular organisms → Bacteria683Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil35.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.35%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.35%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.73%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.11%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.11%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.86%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.24%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.24%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.24%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.24%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.62%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.62%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.62%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.62%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.62%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.62%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005877Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026217Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026824Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028138Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25EnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030842Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F24TB_1568419213300000550SoilMSGSTNGLSNGKNGKKRRRRILWAVAGMVVLLGAGLGVKAALSP
JGI12635J15846_1005003413300001593Forest SoilMSSNGNALGNGKNGKKRRRRIIWAAIAVVVVGGGGYGVKAALSPN
JGI12635J15846_1078923323300001593Forest SoilMSINGNNLTNGKNGKKRRRRIIWVVAILVVLGAGGYGVMAALRPSHEIDPSK
JGI25381J37097_107087313300002557Grasslands SoilMSSNGNGLGNGKNGKKRRRIFWAAIALVVLGGGGYGVKAALSPNRTIDPSKIA
Ga0062389_10488487913300004092Bog Forest SoilMSSGSNGLNGSNGKKRKRRMIWAAVGLVVLGGGGYGVMAALRPSH
Ga0066679_1102042023300005176SoilMSSNGSGLGNGKNGKKRRRVMWGAIAVVVLAGGGYGVKAALSPSRAIDPSKIASVERGDLARVV
Ga0066690_1055715323300005177SoilMSSNGNGLTNGLNGKKAKKHRRRILWTAVIVLLLGGGAYGVKAALSPNHTIDPSK
Ga0066688_1060024713300005178SoilMSSNGNGLGNGRNGKKRRRIIWAAIALVVLGGGGYGVKAA
Ga0066684_1001436513300005179SoilMSSNANGLANGKNGKNGKKRRRRILWATVATVVLLGAGYGVKAALSP
Ga0066675_1007626413300005187SoilMSSNGNGLTNGLNGKKAKKHRRRILWTAVIVLLLGGGAYGVKAALSPN
Ga0070708_10142694613300005445Corn, Switchgrass And Miscanthus RhizosphereMSSNTNGLTNGKNGKKRRRRIIWGAIALVVLLGAGFGVKAALSPSHEIDPSKIATVER
Ga0070707_10123012313300005468Corn, Switchgrass And Miscanthus RhizosphereMASNSNGLANGKNGKKRRRRIIWGATALVVILGAGFGVKAALSPSHEIDPAKLANVERGDLARV
Ga0070704_10100508013300005549Corn, Switchgrass And Miscanthus RhizosphereMSSSTNGLATNGKNGKKRRRRIIWGSIALVVLLGAGFGVK
Ga0066692_1049538923300005555SoilMSSNGNGLGNGRNGKSGKKRRRILWGAIAIVVLGGGGYGVKAALSPNRTIDP
Ga0066705_1091498023300005569SoilMSSNGNILGKGKNGKSGKKRRRIIWSAIAVVVLGGGGYGVKAALSPSRTIDPSKI
Ga0066903_10144284213300005764Tropical Forest SoilMSSSTNGLAGNGKNGKKRRRRILWGSVALVVLLGAGLGVKAALSP
Ga0075296_103000913300005877Rice Paddy SoilMASNGNGNGKNGKKRRRRIIWLSVAAVVLVGGGYG
Ga0081455_1077645613300005937Tabebuia Heterophylla RhizosphereMSSSTNGLAGNGKNGKKRRRRIIWGSIALVVLLGAGLGVKAA
Ga0080027_1039655613300005993Prmafrost SoilMSINGNGLTNGKNGKKRRRRIIWLVAIVVVLGAGGYGVMAAL
Ga0075028_10097759013300006050WatershedsMASNGNALTNGKNGKKRRRRIIWGSVALIVLLGGGYGVKAALSPNHEIDPSK
Ga0070715_1064073723300006163Corn, Switchgrass And Miscanthus RhizosphereMASHSNGLTNGKNGKKRRRRIIWGAIALLVILGAGFGVKAALSPSHEIDP
Ga0075018_1066542423300006172WatershedsMASDTLSNGKNGKKRRKRLIWGVLVLMVLAGGGYGIAAALRPSRIIDPSK
Ga0070716_10167426323300006173Corn, Switchgrass And Miscanthus RhizosphereMSSSSNGLTTDGKNGKKRRRRIIWGSIALVVLLGAG
Ga0066665_1076225513300006796SoilMSSNGNGLGNGRNGKSGKKRRRILWGAIAIVVLGGGGYGVKAA
Ga0075436_10050734223300006914Populus RhizosphereMSSNGNGLTNGKNGKKRRRRIVWASVATLVLLGAGYGVKAALSPNH
Ga0099794_1070005013300007265Vadose Zone SoilMSSNGNSLRNGKNSKNGKKRRRMIWAAIALAVLGGGGYGVKAALSPS
Ga0099795_1021105713300007788Vadose Zone SoilMASNGSALTNGKNGKKRRRRIIWGSVALVILLGAGY
Ga0099829_1021068723300009038Vadose Zone SoilMSSNGNGLGNGKIGKNGEKRRRMMWGAVAVVVVGGGGYGVKSALSPSRTI
Ga0099829_1027812813300009038Vadose Zone SoilMRVNEWEFSMSSNGNGLGNGKDRKRRRRRIIWISVAAVILAGGCYGVMAALRPNRTI
Ga0099829_1064514723300009038Vadose Zone SoilMSNGNGLGNGKDRKRRRRRIIWISVAAVILAGGCYGVMAALRPNRTI
Ga0099830_1013993833300009088Vadose Zone SoilMSSNGNGLGNGKNGKKRRRIIWAAIAVVALGGGGYGVKAALSPSRTIDPSKIASAERGDL
Ga0099828_1008110013300009089Vadose Zone SoilMSSNGNGLANGKNGKNGKKRRRIIWAAIAVAVLGGGGYGVK
Ga0099828_1097303523300009089Vadose Zone SoilMSSSGNGLGNGKNGKKRRRRILWAAIAIVVVGGAGYGVKAALSPS
Ga0099827_1012166113300009090Vadose Zone SoilMSSNGNGLGNGKNGKKRRRIIWAAIALVVLGGGGYGVK
Ga0099827_1024368313300009090Vadose Zone SoilMSSNGNSLGNGKNGKKRRRRILWAAIAILVLGGGGYGVK
Ga0105245_1266745313300009098Miscanthus RhizosphereMSSSTNGLATNGKNGKKRRRRIIWGSIALVVLLGAGFGVKAALS
Ga0099792_1126404213300009143Vadose Zone SoilMSSKGNSLANGKNAKKRRRIVWGAIIIVVLAGGGYGVKA
Ga0126373_1033353323300010048Tropical Forest SoilMSSNGNGLANGKNGKKRRRRIIWASIAALVLGGGGYGVKAALS
Ga0126373_1257174713300010048Tropical Forest SoilMPSKGNGLGNGKSGKKRRRRILIAATAALVVIGGGYG
Ga0099796_1054929123300010159Vadose Zone SoilMSSNGNSLANGKNGKKRRRIIWGAIIIVVLAGGGYGVKA
Ga0134065_1018721523300010326Grasslands SoilMSSNGNGLGNGRNSKSGKKRRRTLWGAMAIVVLGGGGYGVKAALSPNRTID
Ga0074044_1116297213300010343Bog Forest SoilMASGSNGLNGTNGKKRRRRLIWAAVGVVVLGGGGYGVMAA
Ga0126376_1230708513300010359Tropical Forest SoilMSSNDSGLRNGKARKKRRRRIVWISVAVILLASAGYGVIAALRPNHTID
Ga0126377_1194260713300010362Tropical Forest SoilMSSGGNGLTNGKNVKKRRRRILWGSISLLVLLGAGFGVKAALSPNHEIDPAKLAA
Ga0126381_10475511723300010376Tropical Forest SoilMSSNANGLTNGKNGKKRRKRIIWGAIAAVVVLGGGFGVKAALSPNKT
Ga0126383_1123463613300010398Tropical Forest SoilMSSNGNGLPNGLNDKQSKKRRRRIIWAAVAALLLGGGGYGV
Ga0137392_1056346023300011269Vadose Zone SoilMSSNTNGLTNGKNGKKRRRRIIWGSVAVVVVLGAGFGVKAALS
Ga0137391_1144133823300011270Vadose Zone SoilMASNSNGLANGKNGKKRRRRIIWGAITLVVILGAGFGVKAALSPSHEIDPAKLANVERGDLAR
Ga0137393_1083650223300011271Vadose Zone SoilMSSNGNGLANVKNGKNSKKRRRIIWSAIAVVVLGGGGYGVKAALSPSRTIDPS
Ga0137388_1013085413300012189Vadose Zone SoilMSRNGNGLGNGKNGKKRRRIIWAAIALVVLGGGGYGVKAALSPSRTI
Ga0137383_1055652913300012199Vadose Zone SoilMSSNGNSLGNGKNGKKRRRRILWAAIAVVVLGGGGYGVKAA
Ga0137383_1073612023300012199Vadose Zone SoilMASNGSALTNGKNGKKRRRRIIWGSVALVILLGGGYGVKAALSPNHEIDPSK
Ga0137382_1006364323300012200Vadose Zone SoilMSSNGNGLGNGKNGKKRRRIIWAAIALVVLGGGGYGVKAALSPNRTIDPS
Ga0137382_1120483823300012200Vadose Zone SoilMSSNGNGFGNGKNGKKRRRIIWAAIALVVLGGGGYGVKAALSPNRTIDPS
Ga0137365_1095921023300012201Vadose Zone SoilMSSNGNGLASGKIGKKRRRRVFWAALVVLLLGGGAYGVKAALSPNRTID
Ga0137399_1128842123300012203Vadose Zone SoilMSSNGNALGNGKNGKNGKKRRRIIWGAIAVVVFGG
Ga0137399_1134811223300012203Vadose Zone SoilMSSNGNGLGNGKNGKKRRRRIIWAAVAVLVLGGGGYGVKAALSPSRT
Ga0137381_1048498313300012207Vadose Zone SoilMSSNGNGLASGKIGKKRRRRVFWAALVVLLLGGGAYGVKAALSPNRTIDPSKL
Ga0137387_1058760823300012349Vadose Zone SoilMSSNSNGLGNVKNSKNGKKRRRRILWAAITVVGLGGD
Ga0137384_1086451423300012357Vadose Zone SoilMSSNTNGLANGKNGKKRRRRIIWGALALVVLLGAGFGVKAALSPSHEIDPSKIATVERGD
Ga0137384_1152092723300012357Vadose Zone SoilMSSNGNGLGNGKNGKKRRRRILWAAIAVVVLGGGGYGVKAALSPSRT
Ga0137385_1034532413300012359Vadose Zone SoilMSSNGNGLPNGKNGKKRRRRIVWGSVATLVLLGAGYGVKAALSPNHTID
Ga0137385_1076505423300012359Vadose Zone SoilMSSNGNGLGNGKNGKKRRRRILWAAIAVVVLGGGGYGVKAALS
Ga0137385_1122237113300012359Vadose Zone SoilMSSNGNGLGNGRNGKSGKKRRRIMWGAIAIVVLGGGGYGVKAALSPNRTIDPSKIASVERGDL
Ga0137360_1147180013300012361Vadose Zone SoilMASNSNGLANGKNGKKRRRRIIWGAIALLVILGAGF
Ga0137360_1178231413300012361Vadose Zone SoilMSSNGNGLGNGKNGKKRRRIIWAAIALVVLGGGGYGVKAALSPSRTIDPSKI
Ga0137361_1031392323300012362Vadose Zone SoilMSSNANGLANGKNGKKRRRHIIWATIVIAVLGGAGYGVKAALSPNRTIDP
Ga0137361_1031837213300012362Vadose Zone SoilMSSNTNGLANGKNGKKRRRRIIWGAISLVVLLGAGFGVKAALSPSDE
Ga0137361_1152780713300012362Vadose Zone SoilMASNSNGLANGKNGKKRRRRIIWGAIALVVILGAGFGVKA
Ga0137390_1059858213300012363Vadose Zone SoilMASNSNGLANGKNGKKRRRRIIWGAITLVVILGAGFGVKAALSPSHEIDPAKLANVERGD
Ga0137390_1106089223300012363Vadose Zone SoilMASNSNGLANGKNGKKRRRRIIWGAIALVVILGAGFGVKAALSPSHEIDPAKLANV
Ga0137398_1002782733300012683Vadose Zone SoilMSSNGNGLGNGKNGKKRRRIIWAAIALVVLGGGGYGVKAALSPNRTIDP
Ga0137398_1107138713300012683Vadose Zone SoilMSSNGNGLGNGRNGKSGKKRRRILWGAIAIVVLGGGGYGVKAALSPNRTI
Ga0137394_1008219323300012922Vadose Zone SoilMSSNGNGLANGKNGKKRRRRIIWAAIVIAVLGGGGYGVKAALS
Ga0137359_1018353733300012923Vadose Zone SoilMSSNGNGLGNGKNGKKRRRIIWAAIALVVLGGGGYGVKAALSPSRTIDPSKIASVERGDLARVVVA
Ga0137359_1045103233300012923Vadose Zone SoilMASNSNGLANGKNGKKRRRRIIWGAIALLVILGAGFGVKAALSPS
Ga0137359_1127824513300012923Vadose Zone SoilMSSNGNGLSNGKDRKRRRRRIVWSSVAALILAAGGYGVMAALRPNRTIDPSKL
Ga0137419_1140168913300012925Vadose Zone SoilMSSSGNGLANGKIGKKRRQRIIWAAMVIAVLGGGGYGVKAALS
Ga0137416_1070169223300012927Vadose Zone SoilMSSNGNGLGNGKNGKKGRRIIWAAIALVVLGGGGYGVKAALSPSRTI
Ga0137416_1191225323300012927Vadose Zone SoilMSSNGNGLGNGKNGKKRRRRIIWAAVAVLVLGGGG
Ga0137407_1161300213300012930Vadose Zone SoilMSSNGNGLGNGRNGKSGKKRRRILWGAIAIVVLGGGGYGVKAALSPNRTIDPSKIASV
Ga0137410_1201420413300012944Vadose Zone SoilMSSNGNGLGNGKNGKKRRRRIIWAAVAVLVLGGGGYGVKAALS
Ga0126369_1189947523300012971Tropical Forest SoilMSSNGNGLANGKNGKKRRRRILWASIALIVLGGGGYGVKAALSPSHVIDP
Ga0137405_133761213300015053Vadose Zone SoilMSSNTNGLTNGKNGKKRRRRIIWGAIALVSAGSPA
Ga0182036_1111414923300016270SoilMPSKGSGLGNGKSGKKRRRRIIVAATAVLVVIGGGYGVFAALRPT
Ga0182041_1013628223300016294SoilMSSNGNGLGNGKASKKRRRRFIIAAIVLLVLVGGGYGVFAALRPIHEVDASKLATAEKGDLARVVVA
Ga0182033_1041485623300016319SoilMPSKGSGLGNGKSGKKRRRRIIVAATAVLVVIGGGYGVFAAL
Ga0182032_1110982813300016357SoilMPSKGNGLGNGKSGKKRRRRIIVAATAALVVIAGGYG
Ga0182037_1088524513300016404SoilMSSNGSGLTGGPANGKNSKKRRRRLIWGAVALLILLGAGF
Ga0182039_1021508413300016422SoilMSSNGNGLGNGKASKKRRRRFIIAVIALLVVIGGGYGVFAALRP
Ga0182039_1165258413300016422SoilMSSNGNGLTGGPANGKNSKKRRRRLIWGAVALLILLGAGFG
Ga0187781_1034140233300017972Tropical PeatlandMSSNGNGLGNGKNGKKRRRRIIWASVALLVLGGAGYGVKAALSPNRTI
Ga0066662_1199096723300018468Grasslands SoilMSSNTNGLTNGKNGKKRRRRIIWGAIALVVLLGAGFGVKAALSPSHEIDPSKIATVERGD
Ga0193756_105405523300019866SoilMSSNGNGLGNGKNGKKRRRIIWAAIAGVVLGGGGYGVKAALSPSRTIDPS
Ga0215015_1008153223300021046SoilMSSNGNGLGNGKNGKNGKKRRRIIWGAIAVGVLGGGG
Ga0210384_1151437523300021432SoilMSSNGNGLANGKNGKKRRRIVWGAIAVVVLGGGGYGVKAALSPSRTIDPSKIAAA
Ga0210409_1043345333300021559SoilMSSNGNDLANGKNGKTGKKRRRIIWGAIAVLVLGGGG
Ga0179589_1000416033300024288Vadose Zone SoilMASNSNGLTNGKNGKKRRRRIIWGAIALVVILGAGFGVKA
Ga0137417_128905223300024330Vadose Zone SoilMSSNDNGLGNGKNSKNGKKRRRIIWGAIAVVVLGGAGY
Ga0207685_1029911923300025905Corn, Switchgrass And Miscanthus RhizosphereMASNSNGLTNGKNGKKRRRRIIWGVVTLVLLLGAGFGVKAALSP
Ga0209871_111139123300026217Permafrost SoilMASNGNGLAGTNGKKRRRRLIWAAIALVVLSGGGYGVMA
Ga0209239_109528923300026310Grasslands SoilMSSNGNGLGNGRNGKSSKKRRRIMWGAIAIVVLGGGGYGVK
Ga0209268_110981513300026314SoilMSSNGNGLGNGRNGKSGKKRRRIMWGAIAIVVLGGGGYGVK
Ga0209471_122625713300026318SoilMSSNGNGLGNGKNGKKRRRIIWAAIALVVLGGGGYGVKAALSPNRTIDPSKIAAVER
Ga0209158_110370933300026333SoilMSSNGNGLGNGRNGKSGKKRRRILWGAIAIVVLGGGGYGVKAAL
Ga0257146_105006413300026374SoilMASNSNGLANGKNGKKRRRRIIWGAIALVVILGAGFGVKAALSPSHEIDP
Ga0209808_125552523300026523SoilMSSNGNGLGNGRNGKKRRRIIWAAIALVVLGGGGYGVKAALSPSR
Ga0209160_112656823300026532SoilMSSNGNGLANGKNGKNGKKRRRIIWGAIAVAALAGGGYGV
Ga0179593_111831513300026555Vadose Zone SoilMSSNGNGLANGKNGRNGKKRRRIIWGAIALVVLAGGGYGVKAALSPSRTIDPSKIASAER
Ga0207723_10785813300026824Tropical Forest SoilMSSNGNSLGNGKASKKRRRRFIMAAIALLVVVGGGYGVFAAL
Ga0209735_112523723300027562Forest SoilMSMNGNNLTNGKNGKKRRRRIIWVVAILVVLGAGGYGVMAALR
Ga0209422_112144613300027629Forest SoilMSMNGNSLTNGKNGKKRRRKIIWMVAILVVLCAGGYGVMAALRPS
Ga0209588_109626923300027671Vadose Zone SoilMSSNDNGLGNGKNSKNGKKRRRIIWGAIAVVVLGGAGYGVKAALSPSRTIDPSKIASAERGDLARVVV
Ga0209118_118120923300027674Forest SoilMSSNGNGLSNGKDRKRRRRRIIWISVAVLILAGGGY
Ga0209180_1018395123300027846Vadose Zone SoilMSSNGNSLGNGKNGKNGKKRRRILWGAIAVVVLAGGGY
Ga0209180_1035548513300027846Vadose Zone SoilMSSNGNSLGNGKNGKKRRRRILWAAIAILVLGGGGYGVKAALSP
Ga0209180_1057766023300027846Vadose Zone SoilMSSNGNGLANGKNGKNGKKRRRIIWAAIALVVVGGGGYGVK
Ga0209701_1052929913300027862Vadose Zone SoilMSSSGNSLGNGKNGKKRRRIIWAAIAGVVLGGGGYGVKA
Ga0209167_1070708013300027867Surface SoilMSSNGNGLGNGKDRKRRRRRIIWISVAALVLAGGGYGVMAALRPNRT
Ga0209579_1004374413300027869Surface SoilVLSGGQDMSSSGNSLNGTNGKNGKKRRRRIIWGSIALVVLLGAG
Ga0209526_1063954223300028047Forest SoilMSMNGNSLTDGKNGKKRRRRIIWMVAILVVLCAGGYGVMAALRPS
Ga0209526_1091102523300028047Forest SoilMLSSGNGLGHGKDRKKRTRRIVWIGIAVLVLGGGG
Ga0247684_103548223300028138SoilMSSSTNGLTANGKNGKKRRRRILWGSIALVVLLGAGLGVKAALSPNHEIDPS
Ga0311352_1020539723300029944PalsaMASGASGLNGANGKKRKRRRLIWVAIAVVVLGGGGYGVMAAL
Ga0302178_1041343623300030013PalsaMSSNGNGTSSEKERKKRRRRIIWISIAVLVLGAGGYG
Ga0075404_1116897613300030842SoilMSMNGNSLTNGKNGKKRRRRIIWLVAILVALCAGGYGVMAALRPS
Ga0073994_1204207113300030991SoilMSTNGNELGNGKNGKKRRRRVIIAVIVAVVVIGAGYGVYA
Ga0170834_10714155113300031057Forest SoilMASNTNGLSNGKNGKKRRRRIIWGVVALVVLLGAGFGVKAALSPSHEIESKKKNEK
Ga0170822_1165703023300031122Forest SoilMSINGNSLTNGRNGKKRRRRIIWLVAILVVLGAGGYGVMAALRPSHE
Ga0170823_1106029313300031128Forest SoilMSMNGNSLTNGKNGKKRRRRIIWLVAILVVLCAGGYGVMAAL
Ga0170818_10211416233300031474Forest SoilMASNSNGLANGKNGKKRRRRIIWGAIALLVILGAGFGVKAALSPSHE
Ga0170818_11527490723300031474Forest SoilMSIGSNGISNGKNGKKRRRRIIWVVAVLVLLGAGGYGV
Ga0318501_1067572823300031736SoilMVECVNQQTPRGSIMSSNGNGLGNGKASKKRRRRFIIAALALLVVVGGGYGVFAALRPTHDIDASKLATVEKGDL
Ga0306918_1016628913300031744SoilMSSNGNGLGNGKASKKRRRRIIIAAIALLVVVGGGYGVFAA
Ga0318546_1059535813300031771SoilMSSNGNGLGNGKASKKRRRRFIIAAIALLVVIGGGYGVFAALRPTHE
Ga0318543_1035477613300031777SoilMSSNGNGLGNGKASKKRRRRFIIAAIVLLVLVGGGYG
Ga0318498_1055846013300031778SoilMPSKGNGLGNGKSGKKRRRRILVAATAALIVIAGGYGVFAALRPT
Ga0307473_1020215913300031820Hardwood Forest SoilMSSNTIGLANGKNGKKRRRRIIWGTIALAVLLGAGFGVKAALSPSHEIDPSKIAT
Ga0307473_1132746423300031820Hardwood Forest SoilMSSNGNGLGNGRNGKIGKKRRRIMWGAIAIVVLGGGGYGVKAALSPNRTIDPSKIASVERGDLAR
Ga0307478_1156462413300031823Hardwood Forest SoilMSSGGNVLNGGNGKNGKKRRRRIIWGSIALVVLLGAGFGVKAALSPS
Ga0306919_1122163313300031879SoilMSSNGNGLTGGPANGKNSKKRRRRLIWGAVALLVLLGAGFGVKAALSPS
Ga0318551_1042525813300031896SoilMPSKGNGLGNGKSGKKRRRRIIVAATAALVVIAGGYGVFAALRP
Ga0306923_1006615943300031910SoilMSSNGNGLASGKNGRKRRRRILWSALVVLLLGGGAYGVKAALS
Ga0310912_1022542623300031941SoilMPSKGNGLGNGKSGKKRRRRIIVAATAALVVIGGGYGVFAALRPTHEIDPS
Ga0310913_1122680313300031945SoilMPSKGNGLGNGKSGKKRRRRIIVAATAALVVIAGGYGV
Ga0310909_1059812723300031947SoilMPSKGNGLGNGKSGKKRRRRIIVAATAALVVIAGGYGVF
Ga0310911_1008932023300032035SoilMSSNGNGLGNGKASKKRRRRIIIAAIALLVVVGGGYGVFA
Ga0310911_1034030113300032035SoilMSSNGNGLASGKNGRKRRRRILWSALVVLLLGGGAYGVKAALSTNHTID
Ga0318559_1025474523300032039SoilMPSKGNGLGNGKSGKKRRRRILVAATAALIVIAGGYGV
Ga0318545_1005907923300032042SoilMPSKGNGLGNGKSGKKRRRRIIVAATAALVVIGGGY
Ga0318532_1008879813300032051SoilMSSSTNGLAGNGKNGKKRRRRILWALVALVVLLGAGLGVKAALSPNH
Ga0318533_1033141513300032059SoilMSSSGSGLNGAPANGKNGRKRRRRMIWGAVSLVVLLGAGLGVKAALSPSHDIDPAKLANVERGDLAR
Ga0318533_1040710813300032059SoilMSSNGNGLANGRNGKRRRKRVLWSAVIVLLLGGGAYGVKAALSPNHT
Ga0318505_1027516313300032060SoilMSSNGNGLGNGKASKKRRRRFIIAALALLVVVGGGYGVFAALRPTHDIDAS
Ga0318505_1029441923300032060SoilMSSNGNGLGNGKASKKPRRRIMIAAIALLVVVGGGYGVFAALRPTHEID
Ga0318524_1063300213300032067SoilMSSSTNGLAGNGKNGKKRRRRILWALVALVVLLGAGLGVKAALSPN
Ga0306924_1023941113300032076SoilMSSNGNGLGNGKASKKRRRRFIIAAIALLVVIGGGYGVF
Ga0307471_10294389113300032180Hardwood Forest SoilMSSNGNGLGNGKDRKRRRRRIIWISVAAVVLAGAGYG
Ga0307471_10386285213300032180Hardwood Forest SoilMSSTTNGLCNGKNGKKRRRRIIWGSIALVVVLGAGFGVKAALSPSHEIDP
Ga0306920_10074975813300032261SoilMSSNGNGLGNGKASKKRRRRFIIAAIALLVVIGGGY
Ga0335077_1137050713300033158SoilMASNGNGLTNGKNGKNGKKRRRRIIIGSIALLILVGAGYGVYAALRPNHEIDPSKIASVERGDL


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