Metagenome / Metatranscriptome Family F040882

Basic Information
Family ID	F040882
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	46 residues
Representative Sequence	MKRIFAVMTFVVLTLSLAAAQRLPEGARPENYKLTFTPDLEKAKFEGDE
Number of Associated Samples	146
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.76 %
% of genes near scaffold ends (potentially truncated)	99.38 %
% of genes from short scaffolds (< 2000 bps)	92.55 %
Associated GOLD sequencing projects	139
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (96.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (22.360 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.248 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1JGI1027J12803_1025183542 2JGIcombinedJ26739_1001799773 3JGI26340J50214_101415862 4Ga0062385_105245961 5Ga0062384_1007846901 6Ga0062389_1021979182 7Ga0058896_13578511 8Ga0058896_14436212 9Ga0058882_16782291 10Ga0066388_1044821432 11Ga0070713_1009769172 12Ga0070710_111531102 13Ga0066681_107985342 14Ga0070734_101013533 15Ga0070735_105337912 16Ga0070730_108358202 17Ga0070733_100393734 18Ga0070733_101168982 19Ga0070732_109841472 20Ga0066903_1010227982 21Ga0075291_10175481 22Ga0070766_109569772 23Ga0075019_110105511 24Ga0070715_107100841 25Ga0066793_105140722 26Ga0099830_102169811 27Ga0099828_109614651 28Ga0116218_14196621 29Ga0116105_10374451 30Ga0116224_106044161 31Ga0126370_110153441 32Ga0136449_1023499922 33Ga0134126_118194902 34Ga0134124_122805891 35Ga0150983_102249111 36Ga0150983_123810081 37Ga0150983_131486412 38Ga0137393_113529471 39Ga0137389_107736571 40Ga0137378_116963792 41Ga0137377_105277401 42Ga0137371_111338742 43Ga0150984_1028230681 44Ga0137398_108711922 45Ga0137416_113874311 46Ga0137416_120200211 47Ga0137404_105360001 48Ga0164302_113942591 49Ga0126369_101321684 50Ga0157369_109944901 51Ga0182018_106215301 52Ga0182024_103149921 53Ga0182024_112458721 54Ga0137403_105023932 55Ga0134072_102164272 56Ga0132258_114297353 57Ga0182037_107317801 58Ga0182039_118079131 59Ga0187818_105569382 60Ga0187819_106611731 61Ga0187847_103517912 62Ga0187817_109966412 63Ga0187781_113998262 64Ga0187780_102712152 65Ga0187780_113840301 66Ga0187777_109688532 67Ga0187782_109544821 68Ga0187823_102094371 69Ga0187884_103834682 70Ga0187881_102120852 71Ga0187883_105731501 72Ga0187887_109442972 73Ga0187772_111929421 74Ga0187769_107148542 75Ga0187769_108401761 76Ga0066655_107288002 77Ga0210407_110156201 78Ga0210399_100817061 79Ga0210395_103467472 80Ga0210401_102168053 81Ga0210401_112108062 82Ga0210400_107149381 83Ga0210393_115180292 84Ga0210385_106828932 85Ga0210386_111660442 86Ga0210394_114315352 87Ga0210384_106380232 88Ga0210391_102137561 89Ga0210391_105780882 90Ga0210392_106529521 91Ga0210392_114898892 92Ga0210398_115387571 93Ga0210402_114577293 94Ga0213853_109136032 95Ga0242662_101787662 96Ga0242673_10155981 97Ga0224544_10178011 98Ga0224565_10073282 99Ga0208935_10445541 100Ga0209176_101643241 101Ga0207664_114938551 102Ga0207665_112022071 103Ga0207665_112312712 104Ga0207702_121605372 105Ga0257153_10777751 106Ga0209059_10036401 107Ga0209648_102411672 108Ga0209648_106640222 109Ga0179587_109337711 110Ga0207819_10264871 111Ga0209115_11597351 112Ga0209221_10534232 113Ga0209736_10325191 114Ga0209517_101165371 115Ga0209693_106203902 116Ga0209166_100372601 117Ga0209167_103386141 118Ga0209169_106917461 119Ga0209624_106313932 120Ga0209415_103498491 121Ga0209006_103650352 122Ga0209698_106889491 123Ga0209698_109018221 124Ga0265355_10230931 125Ga0209526_102516401 126Ga0137415_110556682 127Ga0308309_111444901 128Ga0222749_101074991 129Ga0222748_10260971 130Ga0311362_100855475 131Ga0302148_12449361 132Ga0311340_100166819 133Ga0311352_103680701 134Ga0302270_103445031 135Ga0302306_102322982 136Ga0302182_104102942 137Ga0311357_105645991 138Ga0310039_102652871 139Ga0310038_100706143 140Ga0075386_113307382 141Ga0302180_106579121 142Ga0170834_1012600382 143Ga0265760_101675221 144Ga0170822_140725252 145Ga0302307_104873411 146Ga0310686_1035113811 147Ga0310686_1132612402 148Ga0307474_116076111 149Ga0307475_100147561 150Ga0302319_102391481 151Ga0307478_102512091 152Ga0306925_111272951 153Ga0308175_1005955461 154Ga0308174_105648791 155Ga0307479_118812942 156Ga0335085_122819691 157Ga0335075_104370081 158Ga0316214_10505852 159Ga0334854_038026_1_123 160Ga0334827_138853_614_763 161Ga0370492_0378885_444_572
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1JGI1027J12803_1025183542 2JGIcombinedJ26739_1001799773 3JGI26340J50214_101415862 4Ga0062385_105245961 5Ga0062384_1007846901 6Ga0062389_1021979182 7Ga0058896_13578511 8Ga0058896_14436212 9Ga0058882_16782291 10Ga0066388_1044821432 11Ga0070713_1009769172 12Ga0070710_111531102 13Ga0066681_107985342 14Ga0070734_101013533 15Ga0070730_108358202 16Ga0070733_100393734 17Ga0066903_1010227982 18Ga0075291_10175481 19Ga0070766_109569772 20Ga0070715_107100841 21Ga0099830_102169811 22Ga0116224_106044161 23Ga0126370_110153441 24Ga0134126_118194902 25Ga0137389_107736571 26Ga0137371_111338742 27Ga0137398_108711922 28Ga0137416_113874311 29Ga0137404_105360001 30Ga0126369_101321684 31Ga0182018_106215301 32Ga0182024_103149921 33Ga0132258_114297353 34Ga0182037_107317801 35Ga0182039_118079131 36Ga0187818_105569382 37Ga0187819_106611731 38Ga0187817_109966412 39Ga0187781_113998262 40Ga0187780_102712152 41Ga0187777_109688532 42Ga0187823_102094371 43Ga0187884_103834682 44Ga0187881_102120852 45Ga0187887_109442972 46Ga0210399_100817061 47Ga0210393_115180292 48Ga0210392_114898892 49Ga0242662_101787662 50Ga0242673_10155981 51Ga0224544_10178011 52Ga0224565_10073282 53Ga0207664_114938551 54Ga0209648_102411672 55Ga0179587_109337711 56Ga0209115_11597351 57Ga0209221_10534232 58Ga0209736_10325191 59Ga0209517_101165371 60Ga0209624_106313932 61Ga0209698_106889491 62Ga0265355_10230931 63Ga0302148_12449361 64Ga0302182_104102942 65Ga0310039_102652871 66Ga0170822_140725252 67Ga0308175_1005955461 68Ga0335075_104370081 69Ga0316214_10505852
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48. 1Ga0066793_105140722 2JGI1027J12803_1025183542 3JGIcombinedJ26739_1001799773 4JGI26340J50214_101415862 5Ga0062385_105245961 6Ga0062384_1007846901 7Ga0062389_1021979182 8Ga0058896_13578511 9Ga0058896_14436212 10Ga0058882_16782291 11Ga0066388_1044821432 12Ga0070713_1009769172 13Ga0066681_107985342 14Ga0070733_101168982 15Ga0070732_109841472 16Ga0066903_1010227982 17Ga0070766_109569772 18Ga0075019_110105511 19Ga0070715_107100841 20Ga0099830_102169811 21Ga0116218_14196621 22Ga0116105_10374451 23Ga0116224_106044161 24Ga0126370_110153441 25Ga0134124_122805891 26Ga0150983_131486412 27Ga0137393_113529471 28Ga0137389_107736571 29Ga0137378_116963792 30Ga0137377_105277401 31Ga0137371_111338742 32Ga0150984_1028230681 33Ga0137398_108711922 34Ga0137416_120200211 35Ga0126369_101321684 36Ga0157369_109944901 37Ga0182018_106215301 38Ga0137403_105023932 39Ga0132258_114297353 40Ga0182037_107317801 41Ga0182039_118079131 42Ga0187818_105569382 43Ga0187817_109966412 44Ga0187781_113998262 45Ga0187780_102712152 46Ga0187780_113840301 47Ga0187777_109688532 48Ga0187782_109544821 49Ga0187823_102094371 50Ga0187884_103834682 51Ga0187887_109442972 52Ga0187772_111929421 53Ga0187769_107148542 54Ga0187769_108401761 55Ga0066655_107288002 56Ga0210407_110156201 57Ga0210401_102168053 58Ga0210400_107149381 59Ga0210393_115180292 60Ga0210385_106828932 61Ga0210386_111660442 62Ga0210392_106529521 63Ga0210392_114898892 64Ga0210398_115387571 65Ga0242662_101787662 66Ga0224565_10073282 67Ga0209176_101643241 68Ga0207665_112022071 69Ga0207702_121605372 70Ga0257153_10777751 71Ga0209648_102411672 72Ga0209648_106640222 73Ga0179587_109337711 74Ga0207819_10264871 75Ga0209115_11597351 76Ga0209221_10534232 77Ga0209736_10325191 78Ga0209517_101165371 79Ga0209693_106203902 80Ga0209166_100372601 81Ga0209167_103386141 82Ga0209169_106917461 83Ga0209415_103498491 84Ga0209006_103650352 85Ga0209698_106889491 86Ga0265355_10230931 87Ga0137415_110556682 88Ga0222749_101074991 89Ga0222748_10260971 90Ga0311362_100855475 91Ga0311340_100166819 92Ga0302182_104102942 93Ga0075386_113307382 94Ga0265760_101675221 95Ga0170822_140725252 96Ga0307474_116076111 97Ga0307475_100147561 98Ga0302319_102391481 99Ga0307478_102512091 100Ga0306925_111272951 101Ga0308175_1005955461 102Ga0335085_122819691 103Ga0335075_104370081 104Ga0316214_10505852 105Ga0334827_138853_614_763 106Ga0370492_0378885_444_572
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.77% β-sheet: 0.00% Coil/Unstructured: 66.23%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF01979	Amidohydro_1	81.99
PF13147	Obsolete Pfam Family	8.70
PF11026	DUF2721	0.62
PF13366	PDDEXK_3	0.62
PF00873	ACR_tran	0.62
PF04014	MazE_antitoxin	0.62
PF07969	Amidohydro_3	0.62
PF01175	Urocanase	0.62
PF07963	N_methyl	0.62
PF00963	Cohesin	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	0.62
COG3693	Endo-1,4-beta-xylanase, GH35 family	Carbohydrate transport and metabolism [G]	0.62

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.27 %
Unclassified	root	N/A	3.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.27 %
Unclassified	root	N/A	3.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.27 %
Unclassified	root	N/A	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	92.55 %
Unclassified	root	N/A	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.74 %
Unclassified	root	N/A	3.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	21.74 %
Unclassified	root	N/A	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21.74 %
Unclassified	root	N/A	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.83 %
Unclassified	root	N/A	3.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.35 %
Unclassified	root	N/A	3.73 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102518354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	513	Open in IMG/M
3300002245\|JGIcombinedJ26739_100179977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2001	Open in IMG/M
3300003368\|JGI26340J50214_10141586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	604	Open in IMG/M
3300004080\|Ga0062385_10524596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	735	Open in IMG/M
3300004082\|Ga0062384_100784690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	664	Open in IMG/M
3300004092\|Ga0062389_102197918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	725	Open in IMG/M
3300004101\|Ga0058896_1357851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	863	Open in IMG/M
3300004101\|Ga0058896_1443621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	841	Open in IMG/M
3300004121\|Ga0058882_1678229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	839	Open in IMG/M
3300005332\|Ga0066388_104482143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	711	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.27%
Host-Associated	Host-Associated	3.73%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	11.80%
Plants	Host-Associated → Plants	3.73%
Terrestrial	Environmental → Terrestrial	84.47%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	9.94%
Peat	Environmental → Terrestrial → Peat	8.70%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.86%
Roots	Host-Associated → Plants → Roots	0.62%
Sediment	Environmental → Aquatic → Sediment	1.86%
Soil	Environmental → Terrestrial → Soil	75.16%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.62%
Loam	Environmental → Terrestrial → Soil → Loam	16.15%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.32%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.24%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.62%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.24%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.35%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.24%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.24%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.62%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.62%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.62%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.24%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.86%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.62%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 146 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1025183542	3300000955	Soil	MKKIFTLVTFIVLALSAAVAQRLPEIARPENYKLTFTPDLENARFEGDEAIAIRVLK
JGIcombinedJ26739_1001799773	3300002245	Forest Soil	MKRILTAITFCLLTISLASAQRLPEGSRPENYKLTFTPDLGKATFEGDEV
JGI26340J50214_101415862	3300003368	Bog Forest Soil	MKRIVTFIVFVSAAFSLASAQRLPEVATPENYKLTFKPDLEKA
Ga0062385_105245961	3300004080	Bog Forest Soil	MKRIFAVVTFLVLTFSLATAQRLPEVARPENYKLTFTPNLETAKFEGDETITIRVLKQTS
Ga0062384_1007846901	3300004082	Bog Forest Soil	MKRILTSVLFALTTLSLAAAQRLPEIARPENYKLTFTPDLEKATFQGDETI
Ga0062389_1021979182	3300004092	Bog Forest Soil	MKRTLAIISFLTLTLSLATAQRLPEVARPDNYKLTFTPDLDKA
Ga0058896_13578511	3300004101	Forest Soil	MKRIFAVMTFFVLTISLAVAQRLPEVARPENYKLTFTPNLDKANFE
Ga0058896_14436212	3300004101	Forest Soil	MKKTLVFVIFVLLTLSAATAQRLPEAARPENYKLTFTPDLENAKFEGDETI
Ga0058882_16782291	3300004121	Forest Soil	MKRVFAVVVFVCSTLSLCLAQRLPHQASPENYKLTFTPNLEKATFEGDETISIRV
Ga0066388_1044821432	3300005332	Tropical Forest Soil	MKRIFALLSFLVLTLSLAVAQRLPEIARPDNYKLTFTPDLDKASFEGDETITLHLM
Ga0070713_1009769172	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRTTFAAVSILLLTLMPAVAQRLPETARPENYKLTFTPDLENAK
Ga0070710_111531102	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILSVTTFLVFAISMAAAQRLPEVARPENYKLTFTPDLENAKFE
Ga0066681_107985342	3300005451	Soil	MKRVFALCAFALVVASLALAQRLPAVARPENYKLTFTPDLDKATFAGDEIIAIR
Ga0070734_101013533	3300005533	Surface Soil	MKKNLAVLTFIVLALSLANAQRLPETARPENYKLTF
Ga0070735_105337912	3300005534	Surface Soil	MKRTFAVLTFLVLTISMATAQRLPEIARPDNYKLTFTPDLDNAKFDGDETISV
Ga0070730_108358202	3300005537	Surface Soil	MKRFLPLSVFVLLLTSLAWAQRLPEGAVPDNYKLTF
Ga0070733_100393734	3300005541	Surface Soil	MKRILAVMTFFVLTLSLASAQRLPENVARPENYKLTFMPDL
Ga0070733_101168982	3300005541	Surface Soil	MKRIFAVLSFLALTISLAAAQRLPEVARPENYKLTFTPDLENARFEGDETIA
Ga0070732_109841472	3300005542	Surface Soil	MKRIFAVATFLVLGLSLASAQRLPETARPENYKLTFTPNLDEANFEG
Ga0066903_1010227982	3300005764	Tropical Forest Soil	MKRIFTVVTFLALAISLAAAQRLPENARPENYRLTFTPDLNKAK
Ga0075291_10175481	3300005884	Rice Paddy Soil	MKRFFAILTFTALTLSWASAQRLPETARPENYTLTFTPD
Ga0070766_109569772	3300005921	Soil	MKRILAVLTFALTAFSLVAAQRLPEVAVPENYKLSFMPDL
Ga0075019_110105511	3300006086	Watersheds	MKKIFAALTFVVLTFSTAIAQRLPETARPENYKLTFTLDLENAKFEGDETTAIQVLKPTS
Ga0070715_107100841	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILAILAFMALTFSWAIAQRLPEGIARPQNYNLTFTPDLENAKFEGDETI
Ga0066793_105140722	3300009029	Prmafrost Soil	MKRIFAVMTFVVLTLSLAAAQRLPEGARPENYKLTFTPDLEKAKFEGDE
Ga0099830_102169811	3300009088	Vadose Zone Soil	MKRILFLLAFVAATLSPAAAQRLPQVAEPENYKLSFTPD
Ga0099828_109614651	3300009089	Vadose Zone Soil	MKRTFAVMTFLVLAVSFATAQRLPEVARPENYKLTFTPDLDK
Ga0116218_14196621	3300009522	Peatlands Soil	MKRIFAVISFVTLTLSLAGAQRLPEVARPENYKLTFTPDLEKATFEGDETIAIRVLK
Ga0116105_10374451	3300009624	Peatland	MKRTLAVLSFFALTISLASAQRLPEIARPENYKLTLTPDL
Ga0116224_106044161	3300009683	Peatlands Soil	MRRILAVMTFAALALSLAAAQRLPEVARPENYKLTFTPNLEKATFEGDETIALRVLKPTSEIT
Ga0126370_110153441	3300010358	Tropical Forest Soil	MTILVLTLTAAVAQRLPETARPENYKLTFTPDLENAKFEGEETIT
Ga0136449_1023499922	3300010379	Peatlands Soil	MKRIFAVMTFLGLTLSLAAAQRLPEVALPENYKLTF
Ga0134126_118194902	3300010396	Terrestrial Soil	MKRFFAILTFVVLTLSWASAQRLPESARPENYKLTFTPDLENAKFEGD
Ga0134124_122805891	3300010397	Terrestrial Soil	MKRFFAILTFVVLTLSWASAQRLPETVRPENYKLTFTPDL
Ga0150983_102249111	3300011120	Forest Soil	MKRILAVLAFALTTLSLAAAQRLPEVAAPENYKLTFTPDLDKATFE
Ga0150983_123810081	3300011120	Forest Soil	MKRVFALCAFALVVASLALAQRLPSVARPESYKLTFTPDLDKATFA
Ga0150983_131486412	3300011120	Forest Soil	MLFALTALSLAGAQRLPEVARPENYKLTFHPDLEKATFQGDETI
Ga0137393_113529471	3300011271	Vadose Zone Soil	MKRTFAVMTFLVLAVSFATAQRLPEVARPENYKLTFTPDLDKAKFEGDETIAIRV
Ga0137389_107736571	3300012096	Vadose Zone Soil	MLFVLTFVAFTLSLASAQRLPDVARPENYKLTFTPDL
Ga0137378_116963792	3300012210	Vadose Zone Soil	MKKTLAGVIFVLLTLSVAIAQRLPETARPENYKLTFTPDLENAKFEG
Ga0137377_105277401	3300012211	Vadose Zone Soil	MKQILALMTFVVLTLPLAAAQRLPEIARPENYKLTFTPD
Ga0137371_111338742	3300012356	Vadose Zone Soil	MKRIFAVMSFLALTLSVATAQRLPETARPENYKLNFTPDLESAKFEGEE
Ga0150984_1028230681	3300012469	Avena Fatua Rhizosphere	MKKILFVMTFVVLTLSMAAAQRLPETARPENYKLTFPPDLENAKFEGDETIAIQVAK
Ga0137398_108711922	3300012683	Vadose Zone Soil	MKQILAILSFTLATFSVAVAQRLPEVASPENYKLTFTPD
Ga0137416_113874311	3300012927	Vadose Zone Soil	MKRILAVVAFALTALSLGTAQRLPEVAAPENYKLT
Ga0137416_120200211	3300012927	Vadose Zone Soil	MKRILAVLSFALTTLSLAAGQRLPEVAAPENYKLSFTPDLDKAK
Ga0137404_105360001	3300012929	Vadose Zone Soil	MKRILAVLTFLVLTISMATAQRLPEGIARPDNYKLKFI
Ga0164302_113942591	3300012961	Soil	MKRVLAILAFVALTFSWAIAQRLPAGIARPQNYNLTFTPDLENAKFEGDETITI
Ga0126369_101321684	3300012971	Tropical Forest Soil	MKRIFLLVSFIVLSLPAALAQRLPETARPENYNLTFTPDLDSAKFEGDE
Ga0157369_109944901	3300013105	Corn Rhizosphere	MKRILAILEFVALTFSWAMAQRLPEGIARPQNYNVTFTPDLQNAKFEGDETI
Ga0182018_106215301	3300014489	Palsa	MKRILAVISFAMATFSLAAAQRLPEGAAPENYKLSFTPDLDKAT
Ga0182024_103149921	3300014501	Permafrost	MTFFVLSLSLATAQRLPEGARPENYKLMFTPDLDQAKFEGNETIAIRLLK
Ga0182024_112458721	3300014501	Permafrost	MKRKFAVMTFFVLSLSLATAQRLPEGARPENYKLMFTPDLDQAKFEGNETIAIRLLK
Ga0137403_105023932	3300015264	Vadose Zone Soil	MKRILAVLTFLVLTISMATAQRLPEGIARPDNYKLKFIPDLDKATFE
Ga0134072_102164272	3300015357	Grasslands Soil	MKRILAILAFVALAFSWAMAQRLPEGIARPQNYNLTFTPDLENAKFEGDETITIQVL
Ga0132258_114297353	3300015371	Arabidopsis Rhizosphere	MKRLLAQLTFLALAISMAAAQRLPEIARPENYKLAFTPDLDAAKFEGDETITVRVRLSS
Ga0182037_107317801	3300016404	Soil	MKKIYAVVTFLVLTLSAAMAQRLPETARPENYKLTFTPDLDSAKFSGDETIAV
Ga0182039_118079131	3300016422	Soil	MKKMFAVVTLIVLTLPAVAQRLPQTARPENYKLTFTPDL
Ga0187818_105569382	3300017823	Freshwater Sediment	MKRVLPVLSFLVLTMTLASAQRLPETARPENYKLTFTP
Ga0187819_106611731	3300017943	Freshwater Sediment	MKRIFALLTFLVLTISMAAAQWLPETARPENYKLT
Ga0187847_103517912	3300017948	Peatland	MKRILAVLICVLAAFSVAGAQRLPEVARPENYKLTFTPNL
Ga0187817_109966412	3300017955	Freshwater Sediment	MKRIFAIMTFFVLTLSLAAAQRLPELARPENYNLAFTPDLDKATFEGDETIA
Ga0187781_113998262	3300017972	Tropical Peatland	MSRYFALISFIALTFPAWAQRLPEVAKPDNYKLSFTPDLHTAKFEG
Ga0187780_102712152	3300017973	Tropical Peatland	MKQVSAAVTFLVLTLSLAAAQRLPEVARPENYKLTFTPDLEKATFDGDE
Ga0187780_113840301	3300017973	Tropical Peatland	MKRIFAALTFLVLTISMAAAQRLPELARPENYKLTFTPDLENAKFEGDETIS
Ga0187777_109688532	3300017974	Tropical Peatland	MKQILGATALFTLALSLAVAQRLPEVARPENYKLSFIPHLESATFDGDETIAVQVLKPTS
Ga0187782_109544821	3300017975	Tropical Peatland	MKRIFAVVTFLVLAISLAAAQRLPEIARPENYKLTFTPDLENAKFEGD
Ga0187823_102094371	3300017993	Freshwater Sediment	MNKVRLTMAFCALTLSGAMAQRLPEIAQPENYKLTFTPDLEKASFDGDETILIR
Ga0187884_103834682	3300018009	Peatland	MKRILALLILAPVAFSFVAAQRLPETAAPENYKLTFTPHLE
Ga0187881_102120852	3300018024	Peatland	MKRIFALLVFVSAALSLASAQRLPESATPENYKVTF
Ga0187883_105731501	3300018037	Peatland	MKRILAVLAFALTTLSLAAAQRLPEVAVPENYKLS
Ga0187887_109442972	3300018043	Peatland	MKRILAVLTFALTTLSLAAAQRLPEVAVPENYKLCFTPDLDKATFEGDETVSLRILSPTA
Ga0187772_111929421	3300018085	Tropical Peatland	MKRTFALLSFLALTLSLAAAQRLPEVARPDNYKLTFTPDLQRAT
Ga0187769_107148542	3300018086	Tropical Peatland	MKRIFAVMTFVVLSHSLTVAQRLPEVARPENYKLTFTPDLEKATFEGDE
Ga0187769_108401761	3300018086	Tropical Peatland	MKRIFVLISFTALSLSLAAAQRLPEVARPENYKLIFTPDLEKATFEGDETITI
Ga0066655_107288002	3300018431	Grasslands Soil	MKRILVVITFLALALSGASAQRLPEVARPDNYKLTFTPDLEKATFE
Ga0210407_110156201	3300020579	Soil	MKRTFAVLTFLVLTISMATAQRLPEIARPDNYKLTFTPDLESAKFEGDETIAIRVLK
Ga0210399_100817061	3300020581	Soil	MNRILAVIAFVVLTLSMATAQRLPETARPDNYKLTFTPNLEIA
Ga0210395_103467472	3300020582	Soil	MKRILAVLIFASAAFSLAAAQRLPEVATPENYKLVFTPNLEKAT
Ga0210401_102168053	3300020583	Soil	MKRILAVLTFALATFSLAAAQRLPEVAAPDAYKLTFTPDLEKATF
Ga0210401_112108062	3300020583	Soil	MKRIPVLLTFVLATFTLASAQRLPEVATPENYKLTF
Ga0210400_107149381	3300021170	Soil	MKRILALLTFVLATFSGAMAQRLPEVAAPENYKLTFTPDLEKATFEGDETIAIRVLKST
Ga0210393_115180292	3300021401	Soil	MKRILRVPTFVLLALSLAAAQRLPEVARPDNYKLTFSPDLDRATFE
Ga0210385_106828932	3300021402	Soil	MNRILAVIAFVVLTLSMATAQRLPETARPDNYKLTFTPNLEKANFEGEE
Ga0210386_111660442	3300021406	Soil	MKRPLAVIGFVVLTLSLAAAQRLPEIARPDNYKLTFTPDLDKA
Ga0210394_114315352	3300021420	Soil	MKRIFAVMTFLVLTLSLAAAQRLPEVARPENYKLTFKPDLEKAKFEGDE
Ga0210384_106380232	3300021432	Soil	MNRILAVIAFVVLTLSIATAQRLPETARPDNYKLTFTPNLEK
Ga0210391_102137561	3300021433	Soil	MNRILAVIAFVVLTLSMATAQRLPETARPDNYKLTFTPNLEKANFEGEETI
Ga0210391_105780882	3300021433	Soil	MKRIFAVMTFFVLTISLAAAQRLPEVARPENYKLTFTPDLDNAQ
Ga0210392_106529521	3300021475	Soil	MKRILAVLIFASAAFSLAAAQRLPEVATPENYKLVFTPNLEKATFEGDETISVRIL
Ga0210392_114898892	3300021475	Soil	MKRILAISIVAFGAVSMAAAQRLPQVAAPDNYKLTFTPNLEKATFDG
Ga0210398_115387571	3300021477	Soil	MKRIFAVMTFLVLALSLAAAQRLPEVARPENYKLTFKPDLEKTKFEGDETISIRV
Ga0210402_114577293	3300021478	Soil	MKRILVLLAFVASTLSLAAAQRLPQVATPDNYKLSF
Ga0213853_109136032	3300021861	Watersheds	MKRILAALTFLVLTVSPTFAQRLPEVARPDNYKLTF
Ga0242662_101787662	3300022533	Soil	MKRIPVLLTFVLATFTLASAQRLPEVATPENYKLTFTPDVEKATFEGDETI
Ga0242673_10155981	3300022716	Soil	MKRILTSVLFALTTLSLAGAQRVPEIARPENYKLTFTPD
Ga0224544_10178011	3300023250	Soil	MKRSLAVIIFALATFSLAGAQRLSEVARPENYKLSFTPN
Ga0224565_10073282	3300024176	Plant Litter	MKRILAVLIFALATFSVAGAQRLPEVSRPENYKLTFSPDLEKAAFEGE
Ga0208935_10445541	3300025414	Peatland	MKRILAVLICVLAAFSVAGAQRLPEVARPENYKLTFTPNLETA
Ga0209176_101643241	3300025854	Arctic Peat Soil	MKRIFAVTTFLVLTISLAAAQRLPEVARPENYKLAFTPD
Ga0207664_114938551	3300025929	Agricultural Soil	MKRILAILAFVALTFSWAMAQRLPEGIARPQNYNVT
Ga0207665_112022071	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILSVTTFLVFAISMAAAQRLPEVARPENYKLTFTPDLENAKFEGD
Ga0207665_112312712	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILAILAFVALTFSWAVAQRLPEGITRPQNYNLTFTPDL
Ga0207702_121605372	3300026078	Corn Rhizosphere	MKRFFAILTFSALTLSWASAQRLPETARPENYTLTFTPDLENAKFEGDETI
Ga0257153_10777751	3300026490	Soil	MKRTFAVMIFLVLALSFVAAQRLPELARPENYKLTFTPDLDKARFE
Ga0209059_10036401	3300026527	Soil	MKRILAILAFVALAFSWAMAQRLPEGIARPQNYNVTFTPDLQNAKFEGDETITIQVLK
Ga0209648_102411672	3300026551	Grasslands Soil	MKRIPVLCMFMLAALSWAVAQRLPEIARPENYKLTFTPD
Ga0209648_106640222	3300026551	Grasslands Soil	MKRTFAVVTFLVVTLSLAAAQRLPEVARPENYKLTFTPDLDKAKFEG
Ga0179587_109337711	3300026557	Vadose Zone Soil	MKRILTVISFFAMTISLASAQRLPEVARPDNYKLKFSPDLD
Ga0207819_10264871	3300027024	Tropical Forest Soil	MKRLLAVSTFLVLTFSVANAQRLPETARPENYKLTFAPDL
Ga0209115_11597351	3300027567	Forest Soil	MKRILAVLIFALGAFSLAAGQRVPEVAIPENYKLTFTPNLES
Ga0209221_10534232	3300027609	Forest Soil	MKKILAVLSFVVTAFSLVAAQRLPEIAVPENYKLTFTPDLEAATFQGD
Ga0209736_10325191	3300027660	Forest Soil	MKRILACLTFALITISMAVAQRLPGVAAPENYKLTFTPNLEKATFEG
Ga0209517_101165371	3300027854	Peatlands Soil	MKRILAVLFFASTAFFLAAAQRLPEVATPENYKLTFTPNLEKATFA
Ga0209693_106203902	3300027855	Soil	MQRILAVISLVLATVSLAAAQRLPEGAAPENYKLSFAPDLD
Ga0209166_100372601	3300027857	Surface Soil	MKRMLAVLPFLVLTVSLAAAQRLPETARPENYKLTFTPDLEKAN
Ga0209167_103386141	3300027867	Surface Soil	MKRIFAVLTFALIAFSLAAGQRLPEVAAPENYKLSFTP
Ga0209169_106917461	3300027879	Soil	MKRILVVMTFVVLTLSLASAQRLPENVARPENYKLTFTPDLDKAKFEGDETITLRMLK
Ga0209624_106313932	3300027895	Forest Soil	MNRILAVIASVVLTLSMATAQRLPETARPDNYKLTFTPNLEKANFEGEETISIRVL
Ga0209415_103498491	3300027905	Peatlands Soil	MKHIFAVLTFVVLTLSLASAQRLPETARPENYKLTFTPDLDKAKFDGDETIAIR
Ga0209006_103650352	3300027908	Forest Soil	MKRILAVVTFVAAALSLAPAQRLPEIATPENYKLTFTPDL
Ga0209698_106889491	3300027911	Watersheds	MNKIVGVAIFTLLTLSVAAAQRLPETARPKNYKLTFTPDLENAKF
Ga0209698_109018221	3300027911	Watersheds	MKRIFAVVTFVVLTLSLAIAQRLPEVARPENYKLT
Ga0265355_10230931	3300028036	Rhizosphere	MKRILAVLIFASVAFSVAAGQRLPEVAVPENYKLILTPNLERATFEGDETISIRILKP
Ga0209526_102516401	3300028047	Forest Soil	MKRILTAITFCLLTISLASAQRLPEGSRPENYKLTFTP
Ga0137415_110556682	3300028536	Vadose Zone Soil	MKRILAVVAFALTALSLGTAQRLPEVAAPENYKLTFTPDLEKAKFEGDETISM
Ga0308309_111444901	3300028906	Soil	MKRILTSMLFALTALSLAGAQRLPDVARPENYKLTFTPDL
Ga0222749_101074991	3300029636	Soil	MKRILAVLTFLLTTFSLAAAQRLPEVAAPENYKLTFTPD
Ga0222748_10260971	3300029701	Soil	MKRILAIMIFVVSTLSLASAQRLPEIARPENYKLTFTPDLDKARFEGEETIAIRV
Ga0311362_100855475	3300029913	Bog	MKRIFAVLICVLASFSAAGAQRLPEVARPENYKLTFTPNLETATFEGDETISIRVL
Ga0302148_12449361	3300029916	Bog	MKRIFAVLICVLASFSAAGAQRLPEVARPENYKLTFTPNLETATF
Ga0311340_100166819	3300029943	Palsa	MKRFLAVMTFLVLTFSLANAQRLPEVARPDNYKLTFTPNLEAATFEGDETITLH
Ga0311352_103680701	3300029944	Palsa	MKRSLAVIIFALATFSLAGAQRLSEVARPENYKLSFTPNLEV
Ga0302270_103445031	3300030011	Bog	MKRILAVLAFALTTLYLAAAQRLPEVAVPENYKLSF
Ga0302306_102322982	3300030043	Palsa	MKRILTVLAFALTTLSLAAAQRLPEVAVPENYRLSFTPDLD
Ga0302182_104102942	3300030054	Palsa	MKRSLAVIIFALATFSLAGAQRLSEVARPENYKLSFTPNLEVATFEGDETISIQV
Ga0311357_105645991	3300030524	Palsa	MKRSLAVIIFALATFSLAGAQRLSEVARPENYKLSFTPNLEVATFEGDETISIQVL
Ga0310039_102652871	3300030706	Peatlands Soil	MKRIFAVISFVTLTLSLAGAQRLPEVARPENYKLT
Ga0310038_100706143	3300030707	Peatlands Soil	MKRIFAIVTFVVLTLSLASAQRLPETARPENYKLTFTPDLDKA
Ga0075386_113307382	3300030916	Soil	MKRVFAVLTFLALTISVATAQRLPEIARPDNYKLTFTPDLENAKFEGEE
Ga0302180_106579121	3300031028	Palsa	MKRILAVISFALATVSLAAAQRLPEGAAPENYKLSFTPD
Ga0170834_1012600382	3300031057	Forest Soil	MKRIFAVMTFLVLTISLAAAQRLPEVARPENYKLTFTPDLEKAKFEGDETI
Ga0265760_101675221	3300031090	Soil	MTRIFAVMTFFILSLSLATAQRLPEGARPENYKLMFTPDLGQAKFEGNE
Ga0170822_140725252	3300031122	Forest Soil	MKRIFVVLIFAMMTISLAAAQRLPEVATPENYKLTFNPDLE
Ga0302307_104873411	3300031233	Palsa	MKRILAVISFALATVSLAAAQRLPEGAAPENYKLSFAP
Ga0310686_1035113811	3300031708	Soil	MKRIFAVMTFVVLALSLASAQRLPEVARPDNYKLTFTPDIDKAKFEGDETIT
Ga0310686_1132612402	3300031708	Soil	MKRILTSVLFALTTLSLAGAQRLPESARPENYKLTFTPDLEKATFQGDET
Ga0307474_116076111	3300031718	Hardwood Forest Soil	MKRILAILTFALTAFSVAAAQRLPEVAAPENYKLTFTPHLEKATFDGDE
Ga0307475_100147561	3300031754	Hardwood Forest Soil	MKRSLAILIFALTTFSLANAQRLPEVASPENYKLIFAP
Ga0302319_102391481	3300031788	Bog	MKRMLAVLMFALTTLSLATAQRLPEVAVPENYKLSFNPDLDKATFEGDETISIR
Ga0307478_102512091	3300031823	Hardwood Forest Soil	MNRIFAGITFLMLTISLAAAQRLPEVARPENYKLTFTPDLDKAKFEGDETIAIRLLK
Ga0306925_111272951	3300031890	Soil	MKRILAVMTFLALCISAAVAQRLPEIARPDNYKLTFTPDLENAKFAGDETIS
Ga0308175_1005955461	3300031938	Soil	MKRILAVLAFVALTFSWAFAQRLPEGIARPENYKLTFTPDLEN
Ga0308174_105648791	3300031939	Soil	MKRILAILAFVALTFSWAMAQRLPEGIARPQNYNVTFTPD
Ga0307479_118812942	3300031962	Hardwood Forest Soil	MKRILLMLAFALTTLSLATAQRLPEVAAPENYKLTF
Ga0335085_122819691	3300032770	Soil	MKRILAVTIFLVLSLSLASAQRLPEVARPENYKLTFAPDLEKATF
Ga0335075_104370081	3300032896	Soil	MKRTLAVLTFVVLTIALASAQRLPEIARPENYKLTFTPDLENAKFEGDEVLTINVL
Ga0316214_10505852	3300033545	Roots	MQRFFLSLAFLLAGLSLAAAQRLPEVAASENYKLSFTPDLDKARFEGD
Ga0334854_038026_1_123	3300033829	Soil	MKRILAVIAFALTTLSLAAAQRLPEAAVPENYKLSFTPDLD
Ga0334827_138853_614_763	3300034065	Soil	MKRIFAGMTFIVLALSLASAQRLPEVARPENYKLTFTPDIDKAKFEGDET
Ga0370492_0378885_444_572	3300034282	Untreated Peat Soil	MKRISAILIFVSAAFSVAVAHRLPEVATPENYKLTFTPNLEKA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040882

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences