Metagenome / Metatranscriptome Family F040808

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F040808
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	57 residues
Representative Sequence	MGLRESAVIGILGLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Number of Associated Samples	112
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.38 %
% of genes near scaffold ends (potentially truncated)	26.71 %
% of genes from short scaffolds (< 2000 bps)	78.88 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.441 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.224 % of family members)
Environment Ontology (ENVO)	Unclassified (31.677 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.702 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.09% β-sheet: 0.00% Coil/Unstructured: 40.91%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF03150	CCP_MauG	20.50
PF00034	Cytochrom_C	13.04
PF00596	Aldolase_II	3.73
PF12860	PAS_7	1.86
PF13188	PAS_8	1.24
PF00248	Aldo_ket_red	0.62
PF12729	4HB_MCP_1	0.62
PF10082	BBP2_2	0.62
PF00289	Biotin_carb_N	0.62
PF01243	Putative_PNPOx	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	20.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.44 %
Unclassified	root	N/A	10.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.44 %
Unclassified	root	N/A	10.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.44 %
Unclassified	root	N/A	10.56 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.20 %
Unclassified	root	N/A	10.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.37 %
Unclassified	root	N/A	10.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	49.07 %
Unclassified	root	N/A	10.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.80 %
Unclassified	root	N/A	10.56 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.32 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1.86 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.56 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1.86 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.24 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.56 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1.86 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	1.24 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.62 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001169\|JGI12661J13543_102882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	619	Open in IMG/M
3300003505\|JGIcombinedJ51221_10082847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1262	Open in IMG/M
3300005332\|Ga0066388_101722174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1110	Open in IMG/M
3300005435\|Ga0070714_101996273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	566	Open in IMG/M
3300005538\|Ga0070731_10039026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3190	Open in IMG/M
3300005538\|Ga0070731_10108802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1835	Open in IMG/M
3300005542\|Ga0070732_10005822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6702	Open in IMG/M
3300005542\|Ga0070732_10520912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	721	Open in IMG/M
3300005542\|Ga0070732_10733637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	602	Open in IMG/M
3300005591\|Ga0070761_10607396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	680	Open in IMG/M
3300005591\|Ga0070761_10667187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	650	Open in IMG/M
3300005602\|Ga0070762_10635337	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300005602\|Ga0070762_10775110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	647	Open in IMG/M
3300005602\|Ga0070762_11269885	Not Available	510	Open in IMG/M
3300005610\|Ga0070763_10041840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2146	Open in IMG/M
3300006028\|Ga0070717_10741359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	893	Open in IMG/M
3300006050\|Ga0075028_100904782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	544	Open in IMG/M
3300006052\|Ga0075029_100898152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	607	Open in IMG/M
3300006052\|Ga0075029_101047151	Not Available	565	Open in IMG/M
3300006162\|Ga0075030_100842100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	724	Open in IMG/M
3300006173\|Ga0070716_100582274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	839	Open in IMG/M
3300006175\|Ga0070712_101240434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	649	Open in IMG/M
3300006176\|Ga0070765_100721365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	942	Open in IMG/M
3300006176\|Ga0070765_100776189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	905	Open in IMG/M
3300006176\|Ga0070765_101722357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	588	Open in IMG/M
3300006354\|Ga0075021_10773366	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300006893\|Ga0073928_10229148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1434	Open in IMG/M
3300009519\|Ga0116108_1143581	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300009521\|Ga0116222_1230666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300009522\|Ga0116218_1084238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1449	Open in IMG/M
3300009839\|Ga0116223_10892948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300010379\|Ga0136449_100326211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2778	Open in IMG/M
3300010379\|Ga0136449_101170930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1214	Open in IMG/M
3300010379\|Ga0136449_101386172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1087	Open in IMG/M
3300010379\|Ga0136449_102273604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300010379\|Ga0136449_102341875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300011270\|Ga0137391_11050673	Not Available	661	Open in IMG/M
3300012088\|Ga0153944_1113383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300014158\|Ga0181521_10014938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6983	Open in IMG/M
3300014201\|Ga0181537_10801596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300014489\|Ga0182018_10018805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4608	Open in IMG/M
3300014489\|Ga0182018_10461233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300014501\|Ga0182024_10567518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1428	Open in IMG/M
3300014501\|Ga0182024_12747038	Not Available	525	Open in IMG/M
3300014657\|Ga0181522_10086073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1804	Open in IMG/M
3300015089\|Ga0167643_1002763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2291	Open in IMG/M
3300017940\|Ga0187853_10038977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2485	Open in IMG/M
3300018013\|Ga0187873_1214566	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300018016\|Ga0187880_1462752	Not Available	523	Open in IMG/M
3300018033\|Ga0187867_10056553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2344	Open in IMG/M
3300018034\|Ga0187863_10424989	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300018038\|Ga0187855_10747656	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300018040\|Ga0187862_10016849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	5875	Open in IMG/M
3300018047\|Ga0187859_10190777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1093	Open in IMG/M
3300019786\|Ga0182025_1079007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300019786\|Ga0182025_1162431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2802	Open in IMG/M
3300019786\|Ga0182025_1210668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1542	Open in IMG/M
3300019786\|Ga0182025_1248309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2593	Open in IMG/M
3300020579\|Ga0210407_10420534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046	Open in IMG/M
3300020580\|Ga0210403_10076124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	2699	Open in IMG/M
3300020581\|Ga0210399_11394503	Not Available	548	Open in IMG/M
3300020582\|Ga0210395_10002306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14839	Open in IMG/M
3300020583\|Ga0210401_10081898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3037	Open in IMG/M
3300020583\|Ga0210401_10110616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2579	Open in IMG/M
3300020583\|Ga0210401_10429109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1184	Open in IMG/M
3300021088\|Ga0210404_10045666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2038	Open in IMG/M
3300021168\|Ga0210406_10644610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300021170\|Ga0210400_10621349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M
3300021170\|Ga0210400_11022654	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300021170\|Ga0210400_11216488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300021171\|Ga0210405_10007817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9339	Open in IMG/M
3300021171\|Ga0210405_10071476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2735	Open in IMG/M
3300021178\|Ga0210408_10026993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4553	Open in IMG/M
3300021180\|Ga0210396_10090812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2767	Open in IMG/M
3300021180\|Ga0210396_10463931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1110	Open in IMG/M
3300021181\|Ga0210388_10265631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1506	Open in IMG/M
3300021181\|Ga0210388_11353051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300021181\|Ga0210388_11394578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300021402\|Ga0210385_10000171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	65416	Open in IMG/M
3300021402\|Ga0210385_10104410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1981	Open in IMG/M
3300021402\|Ga0210385_10105555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1971	Open in IMG/M
3300021402\|Ga0210385_11538138	Not Available	508	Open in IMG/M
3300021403\|Ga0210397_10310109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1161	Open in IMG/M
3300021403\|Ga0210397_11213824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300021403\|Ga0210397_11292486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300021404\|Ga0210389_10267931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1337	Open in IMG/M
3300021405\|Ga0210387_11339778	Not Available	617	Open in IMG/M
3300021406\|Ga0210386_11081246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300021406\|Ga0210386_11773408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300021407\|Ga0210383_10064075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3069	Open in IMG/M
3300021407\|Ga0210383_10640739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300021420\|Ga0210394_10234339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1605	Open in IMG/M
3300021432\|Ga0210384_11268487	Not Available	641	Open in IMG/M
3300021477\|Ga0210398_10105757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2285	Open in IMG/M
3300021479\|Ga0210410_10043783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	3897	Open in IMG/M
3300021860\|Ga0213851_1508811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300021861\|Ga0213853_10981105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300022557\|Ga0212123_10359494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	992	Open in IMG/M
3300022724\|Ga0242665_10214809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300024225\|Ga0224572_1006851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2071	Open in IMG/M
3300024225\|Ga0224572_1008797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1873	Open in IMG/M
3300024225\|Ga0224572_1112625	Not Available	504	Open in IMG/M
3300024227\|Ga0228598_1025872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1155	Open in IMG/M
3300024271\|Ga0224564_1000136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8879	Open in IMG/M
3300024271\|Ga0224564_1137128	Not Available	505	Open in IMG/M
3300025509\|Ga0208848_1009405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2032	Open in IMG/M
3300025898\|Ga0207692_11182207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300025915\|Ga0207693_10128037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1996	Open in IMG/M
3300026467\|Ga0257154_1016024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1065	Open in IMG/M
3300027106\|Ga0208607_103231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	727	Open in IMG/M
3300027334\|Ga0209529_1062090	Not Available	636	Open in IMG/M
3300027370\|Ga0209010_1008905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1892	Open in IMG/M
3300027505\|Ga0209218_1014872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1401	Open in IMG/M
3300027521\|Ga0209524_1017557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300027568\|Ga0208042_1009744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2566	Open in IMG/M
3300027591\|Ga0209733_1142651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300027678\|Ga0209011_1002722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6229	Open in IMG/M
3300027783\|Ga0209448_10318038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300027842\|Ga0209580_10000009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	526598	Open in IMG/M
3300027853\|Ga0209274_10694889	Not Available	525	Open in IMG/M
3300027855\|Ga0209693_10059351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1883	Open in IMG/M
3300027855\|Ga0209693_10093579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1486	Open in IMG/M
3300027879\|Ga0209169_10022093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3426	Open in IMG/M
3300027879\|Ga0209169_10720071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300027884\|Ga0209275_10048939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2025	Open in IMG/M
3300027884\|Ga0209275_10702590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300027894\|Ga0209068_10677250	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300027895\|Ga0209624_10386341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300027911\|Ga0209698_10543291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	897	Open in IMG/M
3300028906\|Ga0308309_10276494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1413	Open in IMG/M
3300028906\|Ga0308309_10952517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300028906\|Ga0308309_11107274	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300028906\|Ga0308309_11759532	Not Available	525	Open in IMG/M
3300028906\|Ga0308309_11866644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300030760\|Ga0265762_1187830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300030763\|Ga0265763_1024363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300030878\|Ga0265770_1029243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300030940\|Ga0265740_1008216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300031057\|Ga0170834_106247681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300031090\|Ga0265760_10061630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1141	Open in IMG/M
3300031231\|Ga0170824_120381310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300031231\|Ga0170824_124757645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300031469\|Ga0170819_12413618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	973	Open in IMG/M
3300031474\|Ga0170818_114420295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300031708\|Ga0310686_110376342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1944	Open in IMG/M
3300031715\|Ga0307476_11166031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300031718\|Ga0307474_11208708	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300031823\|Ga0307478_10413873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1118	Open in IMG/M
3300031823\|Ga0307478_11665925	Not Available	526	Open in IMG/M
3300032160\|Ga0311301_10619973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1551	Open in IMG/M
3300032160\|Ga0311301_10807247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1287	Open in IMG/M
3300032160\|Ga0311301_11585456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300032160\|Ga0311301_11927708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300032160\|Ga0311301_13014880	Not Available	506	Open in IMG/M
3300032174\|Ga0307470_11789880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300032180\|Ga0307471_101832184	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300032205\|Ga0307472_101104335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300032783\|Ga0335079_12039447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300032805\|Ga0335078_10430696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1720	Open in IMG/M
3300032892\|Ga0335081_11450099	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.89%
Host-Associated	Host-Associated	3.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.99%
Aquatic	Environmental → Aquatic	14.91%
Plants	Host-Associated → Plants	2.48%
Fungi	Host-Associated → Fungi	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.99%
Freshwater	Environmental → Aquatic → Freshwater	9.32%
Sediment	Environmental → Aquatic → Sediment	4.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.48%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.24%
Mycelium	Host-Associated → Fungi → Mycelium	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.55%
Loam	Environmental → Terrestrial → Soil → Loam	23.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.24%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.24%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.24%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.24%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.22%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	13.04%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.86%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.24%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.24%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.24%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.62%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.62%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001169	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027106	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF031 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101615931	3300000567	Peatlands Soil	VIGILGLLSVMSGTTIAYLAKRFPAHIEFLETGAGALLLGGLAL
JGI12661J13543_1028822	3300001169	Forest Soil	MGPRESAVIGIVGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLAFASCGLPVIL
JGIcombinedJ51221_100828472	3300003505	Forest Soil	MGLREXAVIGILGLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGLALASSGLPVIL
Ga0066388_1017221741	3300005332	Tropical Forest Soil	KHWPLTMPRPDRPDRRENAVIGVLGLLSVMTGAAVATVAQRFPVHIEALQTGAGALLLGGLALASSALPVIL*
Ga0070714_1019962732	3300005435	Agricultural Soil	VVGILGLLSVLTGAAVAYLAKRFPAHIEALETGAGALLIGGLALASCGLPVII*
Ga0070731_100390265	3300005538	Surface Soil	TLMGLQESAVIGILGLLSVMSGSTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL*
Ga0070731_101088022	3300005538	Surface Soil	VIGILGVLSVMSGTTIAYLAKRFPAHIELLETGAGAMLLGGLALASCGLPVII*
Ga0070732_100058224	3300005542	Surface Soil	MPGPDLIGPRENAVVGILGLLSVMTGAAVAYFAERFPAHLEALETGAGALLIGGLALASSGLPII*
Ga0070732_105209121	3300005542	Surface Soil	MPGPDPIGPRESAVVGILGLLSVMTGAAVAYLAKRFPGHIEALETGAGALLIGGLALASCGLPVII*
Ga0070732_107336371	3300005542	Surface Soil	VVVILGLLSVMTGAAVAYFAKHFPAHIEALQTGAGALLLGGLALASYGLPVII*
Ga0070761_106073961	3300005591	Soil	VIGILSLLSVMSGTAIAYLAKRFPTHIELLETGAGALLLGGLALASCGLPVIL*
Ga0070761_106671872	3300005591	Soil	MPGLDLIGPPEKAVVGILGMLSVVTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVLI*
Ga0070762_106353372	3300005602	Soil	MGLRESAVIGILGLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGGMALGSCALPIIL
Ga0070762_107751101	3300005602	Soil	RESAVIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL*
Ga0070762_112698852	3300005602	Soil	MGLRESAVIGILSLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGG
Ga0070763_100418402	3300005610	Soil	VIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGVALASCGLPVIF*
Ga0070717_107413591	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VVGILGLLSVMTGAAVAYLAKRFPGHIEALETGAGALLIGGLALASCGLPVII*
Ga0075028_1009047821	3300006050	Watersheds	VIGILSLLSVMSGTTIAYLAQRFPAHIEALETGAGALLLGGLALASCGLPV
Ga0075029_1008981522	3300006052	Watersheds	MAAILGLLSVTLGGAIACTARRFPAHIEALETGAGALLIGGLLLAGLGLPVLL*
Ga0075029_1010471512	3300006052	Watersheds	MGLRESAVIGILSLLSIVSGTAIAYLAKRFPAHIELLETGAGALLLGGIGLASCGLPVIL
Ga0075030_1008421002	3300006162	Watersheds	MGLRESAVIGILSLLSVVSGTTIAYLAKRFPAHVEFLETGAGALLLGGLALASSGLPVIL
Ga0070716_1005822742	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VVGILGLLTIMTGAAVAYLAERFPAHIEVLETGAGALLIGGLALASCGLPVII*
Ga0070712_1012404342	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LLSVLTGAAVAYLAKRFPGHIEALETGAGALLIGGLALASCGLPVII*
Ga0070765_1007213652	3300006176	Soil	MGLRESAVIGIASLLSVMSGTTIAYLAKRFPAHVELLETGAGALLLGGLALASCGLPVII
Ga0070765_1007761892	3300006176	Soil	MGPRESAVIGILSLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0070765_1017223571	3300006176	Soil	AVIGILSLLSVMSGTAIAYLAKRFPAHIEVLETGAGALLLGGLALASSGLPVIL*
Ga0075021_107733662	3300006354	Watersheds	VAAIVGLLSVLLGCAVACAARRFPAYVAALETGAGMLLIGGLLLAGCALPVLL*
Ga0073928_102291482	3300006893	Iron-Sulfur Acid Spring	VIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL*
Ga0116108_11435811	3300009519	Peatland	MGLRESAVIGILGLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLAL
Ga0116222_12306661	3300009521	Peatlands Soil	SVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL*
Ga0116218_10842381	3300009522	Peatlands Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0116223_108929481	3300009839	Peatlands Soil	MGLRESAVIGILGLLSVTSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVII
Ga0136449_1003262113	3300010379	Peatlands Soil	MGRRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0136449_1011709302	3300010379	Peatlands Soil	MASPDRIGSLEKAVVGILGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVIL*
Ga0136449_1013861721	3300010379	Peatlands Soil	MPGLRENAVVGILGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLCGLALASCGLPVIL*
Ga0136449_1022736042	3300010379	Peatlands Soil	VPGPDLIGSPEKAVVGILGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLCGLALASCGLPVIL*
Ga0136449_1023418751	3300010379	Peatlands Soil	MTGAVVADLAKRFPAHIEVLETGAGALLLCGLALASCGLPVIL*
Ga0137391_110506731	3300011270	Vadose Zone Soil	MPGPNRIGSPETAVVGILGLLSVVTGAVIACLAKRFPAHIEAIETSAGALLLGGLALASCGLPVIL*
Ga0153944_11133832	3300012088	Attine Ant Fungus Gardens	VVGILGLLSVLTGAVVAYSAKRFPAHIEALETGAGALLLGGLALASCGLPIII*
Ga0181521_100149382	3300014158	Bog	MGPRESAVIGILGLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0181537_108015961	3300014201	Bog	VIGILSLLSVISGSAIAYLAKRFPPHIELLETGAGALLLGGLALASSALPVIL*
Ga0182018_100188053	3300014489	Palsa	MGLRESAVIGILSLLSVMSGTAIAYLAKRFPTHIELLETGAGALLLGGLALASSGLPVIL
Ga0182018_104612332	3300014489	Palsa	MGLRESAVIGILSLLSFMSGTTIAYLAKRFPAHIELLETGAGALLLGSLALASSGLPVIL
Ga0182024_105675182	3300014501	Permafrost	VIGILSLLSVVSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL*
Ga0182024_127470381	3300014501	Permafrost	MGLRESAVIGLLSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0181522_100860732	3300014657	Bog	MGLRESAVIGILSLLSVMSGSAIAYLAKRFPAHIELLETGAGALLLGGLALASSALPVIL
Ga0167643_10027631	3300015089	Glacier Forefield Soil	SAVIGILSLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGGLALASSGLPVIL*
Ga0187853_100389773	3300017940	Peatland	VIGILGLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0187873_12145661	3300018013	Peatland	MGLRESAVIGILSLLSFMSGTTNAYRAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0187880_14627521	3300018016	Peatland	MGLRESAVIGILGLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASC
Ga0187867_100565532	3300018033	Peatland	MGLRESAVIGILSLLSVISGSAIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0187863_104249891	3300018034	Peatland	MGLRESAVIGILSLLSVISGSAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0187855_107476561	3300018038	Peatland	MGLRESAVIGILSLLSVMSGTAIAYLAKRFPPHIELLETGAGALLLGGLAL
Ga0187862_100168494	3300018040	Peatland	MGLRESAVIGILGLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0187859_101907772	3300018047	Peatland	VIGILSLLSVISGSAIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0182025_10790072	3300019786	Permafrost	MGLRESAVIGILSLLSVLSGTTIAYLAKRFPAHIELLETGAGALLLGGFALASCGLPVIL
Ga0182025_11624314	3300019786	Permafrost	VIGILSLLSVLSGTTIAYLAKRFPAHIELLETGAGALLLGGFALASCGLPVIL
Ga0182025_12106682	3300019786	Permafrost	VIGILSLLSVVSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0182025_12483095	3300019786	Permafrost	LSLLSVVSGTTIAYLAKRFPAHIELLETGAGALLLGGFALASCGLPVIL
Ga0210407_104205342	3300020579	Soil	MGLRESAVIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0210403_100761244	3300020580	Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGFALASCALPVIL
Ga0210399_113945032	3300020581	Soil	MGLWESAVIGILSLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0210395_100023068	3300020582	Soil	VIGILSLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGFALASSGLPVIL
Ga0210401_100818984	3300020583	Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGFALA
Ga0210401_101106162	3300020583	Soil	MGLRESAVIGILSLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPAIL
Ga0210401_104291092	3300020583	Soil	MGLRESAVIGILGLLSVMSGTAIAYLANRFPAHIELLESGAGALLLGGLALASSGLPVIL
Ga0210404_100456661	3300021088	Soil	MGLRESAVIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALAS
Ga0210406_106446101	3300021168	Soil	MGLRESAVIGILSLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0210400_106213492	3300021170	Soil	MGLRESAVIGILGLVSVMSGTTIAYLANRFPAHIELLETGAGALLLGGLALGSCALPVIL
Ga0210400_110226541	3300021170	Soil	MGLGESGVIGILSLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGGLALASSGLPIIL
Ga0210400_112164881	3300021170	Soil	MGLRESAVIGILSLLSVMSGTTIACLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0210405_1000781710	3300021171	Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGLALASSGLPVIL
Ga0210405_100714762	3300021171	Soil	MGLQESAVIGILGLLSVMSGSTIAYLAKRFPTHIELLETGAGALLLGGLALASCGLPVIL
Ga0210408_100269934	3300021178	Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPIIL
Ga0210396_100908122	3300021180	Soil	VVGLLGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASYGLPVIL
Ga0210396_104639311	3300021180	Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGFALASCALPVI
Ga0210388_102656311	3300021181	Soil	VIGILSLLSVMSGTAIAYLAKRFPTHIELLETGAGALLLGGLALASCGLPVIL
Ga0210388_113530511	3300021181	Soil	LRESAVIGILSLLSLMSGTAIAYLAKRFPAHLELLETGAGALLLGGLALASSGLPVIL
Ga0210388_113945782	3300021181	Soil	VIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0210385_1000017150	3300021402	Soil	MGLRESAVIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0210385_101044103	3300021402	Soil	LMGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGFALASCALPVI
Ga0210385_101055553	3300021402	Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGG
Ga0210385_115381381	3300021402	Soil	MGLRESGVIGILSLLSVMSGTTIACLAKRFPAHIELLETGAGALLLGGL
Ga0210397_103101092	3300021403	Soil	MGLQESAVIGILGLLSVMSGSTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0210397_112138242	3300021403	Soil	RESAVIGILGLLSVISGSTIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPIIL
Ga0210397_112924861	3300021403	Soil	VIGIVGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLAFASCGLPVIL
Ga0210389_102679312	3300021404	Soil	VIGILGLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGGMALGSCALPIIL
Ga0210387_113397782	3300021405	Soil	MGLRESAVIGILSLLSVMSGTTIACLAKRFPAHIELLETGAGALLLGGLALASCELPVIL
Ga0210386_110812462	3300021406	Soil	MGPRESAVIGILGVLSVMSGTAIAYLAKRFPAQIELLETGAGALLLGGLALASSGLPVIL
Ga0210386_117734081	3300021406	Soil	THMGLRESAVIGILSLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPAIL
Ga0210383_100640751	3300021407	Soil	LSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGFALASCALPVIL
Ga0210383_106407392	3300021407	Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLAFASCGLPVIL
Ga0210394_102343392	3300021420	Soil	MRTPMGLRESAVIGIVGLLSVMSGTAIAYLAKRFPAHIEFLETGAGALLLGGLALASCGLPVIL
Ga0210384_112684872	3300021432	Soil	MGLRESTVIGILSLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0210398_101057573	3300021477	Soil	MGLRESAVIGILSLLSVMSGTAIAYLAKRFPAHIELLETSAGALLLGGFALASSGLPVIL
Ga0210410_100437832	3300021479	Soil	MGLRESAVIGILSLLSVMSGSAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0213851_15088112	3300021860	Watersheds	MGLWESAVIGILSLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0213853_109811052	3300021861	Watersheds	AVIGILSLLSVMSGTTIAYLANRFPAHLELLETGAGALLLGGLALASSGLPVIL
Ga0212123_103594942	3300022557	Iron-Sulfur Acid Spring	MGLRESAVIAILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0242665_102148092	3300022724	Soil	LGLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGLALASSGLPVIL
Ga0224572_10068513	3300024225	Rhizosphere	PEKAVVGILGMLSVVTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVLI
Ga0224572_10087971	3300024225	Rhizosphere	MGLWENAVIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0224572_11126252	3300024225	Rhizosphere	VVGLLGLLSVMTGVVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVIL
Ga0228598_10258721	3300024227	Rhizosphere	MGLWENAVIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALA
Ga0224564_10001369	3300024271	Soil	LSVVTSAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVLI
Ga0224564_11371281	3300024271	Soil	MPGPDLIGPPEKAVVGILGMLSVVTGAVIAYLAKRFPAHIEVLETGAGALLLGGLALASCGLPVLI
Ga0208848_10094052	3300025509	Arctic Peat Soil	MGLRESAVIGILSLLSVMSGITIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0207692_111822071	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GPRESAVVGILGLLSVMTGTAVAYLAKRFPAHIEALETGAGALLIGGLALASCGLPVII
Ga0207693_101280371	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GLLSVLTGAAVAYLAKRFPGHIEALETGAGALLIGGLALASCGLPVII
Ga0257154_10160242	3300026467	Soil	MGLRESAVIGILSLLSVMSGTTIAYMAKRFPAHVELLETGAGALLLGGLALAGCGLPVIL
Ga0208607_1032312	3300027106	Forest Soil	VIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVI
Ga0209529_10620901	3300027334	Forest Soil	MGLRESAVIGILSLLTVMSGTTIAYLAKRFPTHIELLETGAGALLLGGLALASSGLPVIL
Ga0209010_10089052	3300027370	Forest Soil	VVGILGLLSVMTGAAFAYSAKRFPAHIEALETGAGALLLSGLALTSCGLPIII
Ga0209218_10148721	3300027505	Forest Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLAFASCG
Ga0209524_10175572	3300027521	Forest Soil	MGLRESAVIGILSLLSVMSGTAIAYLAKRFPAHIELLESGAGALLLGGLALASSGLPVIL
Ga0208042_10097442	3300027568	Peatlands Soil	MGLRESAVIGILGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASSGLPVIL
Ga0209733_11426511	3300027591	Forest Soil	ILGLLSFMTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASSGLPVIL
Ga0209011_10027225	3300027678	Forest Soil	MPGPDRIGPRENAVVGILGMLSVVTGAAIAYLAKRFPAHIEALETGAGALLLGGLALASCGLPIII
Ga0209448_103180381	3300027783	Bog Forest Soil	GKHWPLRMPASRENAVVGILGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLCGLALASCGLPVIL
Ga0209580_10000009361	3300027842	Surface Soil	MPGPDLIGPRENAVVGILGLLSVMTGAAVAYFAERFPAHLEALETGAGALLIGGLALASSGLPII
Ga0209274_106948892	3300027853	Soil	MPGLDLIGPPEKAVVGILGMLSVVTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVLI
Ga0209693_100593513	3300027855	Soil	MGLRESAVIGILSLLSVMSGTAIAYLAKRFPAHLELLETGAGALLLGGLALASSGLPVIL
Ga0209693_100935792	3300027855	Soil	VIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGVALASCGLPVIF
Ga0209169_100220932	3300027879	Soil	MGLRESAVIGILSLLSVMSGTAIAYLAKRFPTHIELLETGAGALLLGGLALASCGLPVIL
Ga0209169_107200711	3300027879	Soil	MGLRESAVIGILSLLSVVSGSAIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0209275_100489392	3300027884	Soil	MGPWESAVIGILGLLSVMSGTAIAYLANRFPAHIELVESGAGALLLGGLALASSGLPVIL
Ga0209275_107025902	3300027884	Soil	ATGKHWPLRMPDSRENAVVGILGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVIL
Ga0209068_106772502	3300027894	Watersheds	VAAIVGLLSVLLGCAVACAARRFPAYVAALETGAGMLLIGGLLLAGCALPVLL
Ga0209624_103863412	3300027895	Forest Soil	VIGILGLLSVMSGTAIAYLAKRFPAHVELLETGAGALLLGGLAFASCGLPVIL
Ga0209698_105432912	3300027911	Watersheds	MGLRESAVIGILSLLSIVSGTAIAYLAKRFPAHIELLETGAGALLLGGIGLAGCGLPVIL
Ga0308309_102764942	3300028906	Soil	VIGILSLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0308309_109525172	3300028906	Soil	MGLRESAVIGILSLLSVMSGTTIAYLAKRFPGHIEILETGAGALVLGGLALASSGLPVIL
Ga0308309_111072742	3300028906	Soil	MGLRESAVIGILGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLAF
Ga0308309_117595322	3300028906	Soil	MGLRESAVIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGL
Ga0308309_118666441	3300028906	Soil	MGLREIAVIGILGLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLAFASCGLPVIL
Ga0265762_11878301	3300030760	Soil	MGLRESAVIGILSLLSVMSGTAIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0265763_10243632	3300030763	Soil	MGLRESAVTGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASCGLPVIL
Ga0265770_10292432	3300030878	Soil	MGLRESAVIGILSLLSVMSGTTIACLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0265740_10082162	3300030940	Soil	EKAVVGILGMLSVVTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVLI
Ga0170834_1062476811	3300031057	Forest Soil	VVAILGLLSVTTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASHGLPVIL
Ga0265760_100616302	3300031090	Soil	MGLRESAVIGILSLLSVMSGSAIAYLAKRFPAHIELLETGAGALLLGGLALGSCGLPVIL
Ga0170824_1203813101	3300031231	Forest Soil	MGLRESVVIGILGLLSVMSGTAIAYLAKHFPAHIELVESGAGALLLGGLALASCRLPVIL
Ga0170824_1247576451	3300031231	Forest Soil	MGPRESAVIGILSLLSVMSGTAIAYLAKSFPAHIELLETGAGALLLGGLALASSGLPIIL
Ga0170819_124136182	3300031469	Forest Soil	MGLWESAVIGILSLLSVMSGTTIAYLANRFPAHLELLETGAGALLLGGLALASSGLPVIL
Ga0170818_1144202951	3300031474	Forest Soil	MGLRESAVIGILGLLSVMSGTTIAYLAKRFPAHIELLETGAGALLLGGLALASSGLPVIL
Ga0310686_1103763422	3300031708	Soil	MPGLDLIGPPEKAVVGILGMLSVVTSAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVLI
Ga0307476_111660311	3300031715	Hardwood Forest Soil	MGLWESAVIGVLGLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGGLALGSCALPVIL
Ga0307474_112087082	3300031718	Hardwood Forest Soil	MGPRESAVIGILSLLSVMSGTTIAYLAKRFPAHIELLETGAGALVLGGLALAS
Ga0307478_104138731	3300031823	Hardwood Forest Soil	MGLRESAVIGILSLLSVMSGTTIAYLAKRFPAHIELLESGAGALLLGGLALASSGLPVIL
Ga0307478_116659252	3300031823	Hardwood Forest Soil	MPGSRENAVVGLLGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASYGLPVI
Ga0311301_106199732	3300032160	Peatlands Soil	MGLRESAVIGILGLLSVMSGTTIAYLAKRFPAHIEFLETGAGALLLGGLALASCGLPVIL
Ga0311301_108072472	3300032160	Peatlands Soil	VVGILGLLSVMTGAVVAYLAKRFPAHIEALETGGGALLLCGLALASCGLPVIL
Ga0311301_115854562	3300032160	Peatlands Soil	MASPDRIGSLEKAVVGILGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLGGLALASCGLPVIL
Ga0311301_119277082	3300032160	Peatlands Soil	VVGILGLLSVMTGAVVAYRAKRFPAHIEVLETGAGALLLCGLALASCGLPVIL
Ga0311301_130148802	3300032160	Peatlands Soil	VPGPDLIGSPEKAVVGILGLLSVMTGAVVAYLAKRFPAHIEALETGAGALLLCGLALASCGLPVIL
Ga0307470_117898802	3300032174	Hardwood Forest Soil	MGLRESAVIGILGLLSVMSGTTIAYLANRFPAHIELLETGAGALLLGGLALGSCALPIIL
Ga0307471_1018321842	3300032180	Hardwood Forest Soil	VVGILGLLSVLTGAAVAYLAKRFPAHIEALETGAGALLIGGLALASCALPVII
Ga0307472_1011043352	3300032205	Hardwood Forest Soil	LLSVLTGAAVAYLAKRFPAHIELLETGAGALLIGGLALASCALPVII
Ga0335079_120394472	3300032783	Soil	VGQREIAVIGILGLLSVMSGTTIAYLAKRFPAHIELLETGAGAMLLGGLALASCGLPVII
Ga0335078_104306962	3300032805	Soil	VIGILGVLSVMSGTTIAYLAKRFPAHIELLETGAGAMLLGGLALASCGLPVII
Ga0335081_114500992	3300032892	Soil	VGQREIAVIGILGVLSVMSGTTIAYLAKRFPAHIELLETGAGAMLLGGLALASCSLPVII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040808

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences