Metagenome / Metatranscriptome Family F040752

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F040752
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	58 residues
Representative Sequence	MMDELAIEELSVRATQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Number of Associated Samples	100
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.79 %
% of genes near scaffold ends (potentially truncated)	20.50 %
% of genes from short scaffolds (< 2000 bps)	81.99 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (68.323 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.360 % of family members)
Environment Ontology (ENVO)	Unclassified (21.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.913 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.29% β-sheet: 4.76% Coil/Unstructured: 55.95%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF13436	Gly-zipper_OmpA	1.86
PF00072	Response_reg	1.24
PF13432	TPR_16	1.24
PF00990	GGDEF	1.24
PF13505	OMP_b-brl	1.24
PF12697	Abhydrolase_6	1.24
PF01370	Epimerase	1.24
PF02586	SRAP	0.62
PF05118	Asp_Arg_Hydrox	0.62
PF13467	RHH_4	0.62
PF13629	T2SS-T3SS_pil_N	0.62
PF02738	MoCoBD_1	0.62
PF09939	DUF2171	0.62
PF00487	FA_desaturase	0.62
PF13340	DUF4096	0.62
PF01068	DNA_ligase_A_M	0.62
PF01527	HTH_Tnp_1	0.62
PF00982	Glyco_transf_20	0.62
PF13701	DDE_Tnp_1_4	0.62
PF00765	Autoind_synth	0.62
PF00805	Pentapeptide	0.62
PF13586	DDE_Tnp_1_2	0.62
PF01656	CbiA	0.62
PF00578	AhpC-TSA	0.62
PF06627	DUF1153	0.62
PF14295	PAN_4	0.62
PF01734	Patatin	0.62
PF13561	adh_short_C2	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG3916	N-acyl-homoserine lactone synthase LasI (autoinducer biosynthesis)	Signal transduction mechanisms [T]	1.24
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.62
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.62
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.62
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.62
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.62
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.62
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.62
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.62
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.62
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
All Organisms	root	All Organisms	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
cellular organisms	root	All Organisms → cellular organisms	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.24 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.24 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
Hyphomicrobium sp. NDB2Meth4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. NDB2Meth4	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.62 %
Sinorhizobium fredii group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
Hyphomicrobium sp. NDB2Meth4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. NDB2Meth4	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Sinorhizobium fredii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	0.62 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig88066	Not Available	645	Open in IMG/M
2170459003\|FZ032L002I6XE7	Not Available	504	Open in IMG/M
2170459003\|FZN2CUW02FQSGQ	Not Available	500	Open in IMG/M
3300001471\|JGI12712J15308_10024100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1585	Open in IMG/M
3300001867\|JGI12627J18819_10102829	Not Available	1180	Open in IMG/M
3300001867\|JGI12627J18819_10402559	Not Available	557	Open in IMG/M
3300002245\|JGIcombinedJ26739_100007268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8733	Open in IMG/M
3300002245\|JGIcombinedJ26739_100695920	Not Available	894	Open in IMG/M
3300002245\|JGIcombinedJ26739_101453771	Not Available	580	Open in IMG/M
3300003505\|JGIcombinedJ51221_10016153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. NDB2Meth4	2544	Open in IMG/M
3300003505\|JGIcombinedJ51221_10057593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1491	Open in IMG/M
3300004092\|Ga0062389_102542512	Not Available	680	Open in IMG/M
3300005332\|Ga0066388_101357298	All Organisms → cellular organisms → Bacteria → Proteobacteria	1231	Open in IMG/M
3300005434\|Ga0070709_11810644	Not Available	500	Open in IMG/M
3300005544\|Ga0070686_101802184	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_108456650	Not Available	525	Open in IMG/M
3300005921\|Ga0070766_10325005	Not Available	993	Open in IMG/M
3300005921\|Ga0070766_10694138	Not Available	689	Open in IMG/M
3300005921\|Ga0070766_11113496	Not Available	545	Open in IMG/M
3300006028\|Ga0070717_11657024	Not Available	579	Open in IMG/M
3300006057\|Ga0075026_101007054	Not Available	518	Open in IMG/M
3300006059\|Ga0075017_100128487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1788	Open in IMG/M
3300006059\|Ga0075017_100376878	Not Available	1061	Open in IMG/M
3300006059\|Ga0075017_100407412	Not Available	1021	Open in IMG/M
3300006059\|Ga0075017_100688676	Not Available	786	Open in IMG/M
3300006175\|Ga0070712_101722120	Not Available	549	Open in IMG/M
3300006176\|Ga0070765_100148582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2087	Open in IMG/M
3300006893\|Ga0073928_10080467	Not Available	2790	Open in IMG/M
3300006893\|Ga0073928_10194281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1595	Open in IMG/M
3300006893\|Ga0073928_10227838	Not Available	1440	Open in IMG/M
3300006904\|Ga0075424_102450646	Not Available	547	Open in IMG/M
3300009148\|Ga0105243_12043978	Not Available	608	Open in IMG/M
3300009521\|Ga0116222_1072674	Not Available	1486	Open in IMG/M
3300009521\|Ga0116222_1182359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	904	Open in IMG/M
3300009522\|Ga0116218_1042152	Not Available	2064	Open in IMG/M
3300009522\|Ga0116218_1202801	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300009522\|Ga0116218_1227095	Not Available	840	Open in IMG/M
3300009522\|Ga0116218_1517337	Not Available	532	Open in IMG/M
3300009525\|Ga0116220_10246285	Not Available	780	Open in IMG/M
3300009552\|Ga0116138_1094730	Not Available	830	Open in IMG/M
3300009553\|Ga0105249_11625479	Not Available	719	Open in IMG/M
3300009683\|Ga0116224_10114060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1308	Open in IMG/M
3300009700\|Ga0116217_10543554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	727	Open in IMG/M
3300009700\|Ga0116217_10642243	Not Available	659	Open in IMG/M
3300009764\|Ga0116134_1149295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	826	Open in IMG/M
3300009824\|Ga0116219_10117117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1551	Open in IMG/M
3300010371\|Ga0134125_11157319	Not Available	846	Open in IMG/M
3300010373\|Ga0134128_10583261	Not Available	1245	Open in IMG/M
3300010379\|Ga0136449_100009045	All Organisms → cellular organisms → Bacteria	27979	Open in IMG/M
3300010379\|Ga0136449_100188880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3946	Open in IMG/M
3300010379\|Ga0136449_100471554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2193	Open in IMG/M
3300010379\|Ga0136449_101078296	Not Available	1282	Open in IMG/M
3300010379\|Ga0136449_101227294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1177	Open in IMG/M
3300010396\|Ga0134126_11680886	Not Available	697	Open in IMG/M
3300012181\|Ga0153922_1070076	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	783	Open in IMG/M
3300012951\|Ga0164300_10046696	Not Available	1689	Open in IMG/M
3300012951\|Ga0164300_10092017	Not Available	1311	Open in IMG/M
3300012957\|Ga0164303_10152683	Not Available	1224	Open in IMG/M
3300012958\|Ga0164299_10125895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. NDB2Meth4	1378	Open in IMG/M
3300012958\|Ga0164299_10169685	Not Available	1229	Open in IMG/M
3300012960\|Ga0164301_10062896	Not Available	1974	Open in IMG/M
3300012960\|Ga0164301_10363914	Not Available	999	Open in IMG/M
3300012961\|Ga0164302_11911932	Not Available	505	Open in IMG/M
3300012989\|Ga0164305_10298203	Not Available	1189	Open in IMG/M
3300014325\|Ga0163163_10870870	Not Available	964	Open in IMG/M
3300014657\|Ga0181522_10584872	Not Available	677	Open in IMG/M
3300015371\|Ga0132258_10583832	Not Available	2804	Open in IMG/M
3300015371\|Ga0132258_11193339	Not Available	1924	Open in IMG/M
3300015372\|Ga0132256_100482106	Not Available	1350	Open in IMG/M
3300016445\|Ga0182038_10508831	Not Available	1028	Open in IMG/M
3300017823\|Ga0187818_10371114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300017935\|Ga0187848_10449145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300017943\|Ga0187819_10602021	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300017943\|Ga0187819_10638362	Not Available	602	Open in IMG/M
3300017943\|Ga0187819_10747664	Not Available	550	Open in IMG/M
3300017955\|Ga0187817_10521837	Not Available	758	Open in IMG/M
3300017955\|Ga0187817_10623292	Not Available	688	Open in IMG/M
3300017959\|Ga0187779_10290858	Not Available	1043	Open in IMG/M
3300017961\|Ga0187778_10824960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300017970\|Ga0187783_10007371	All Organisms → cellular organisms → Bacteria → Proteobacteria	8073	Open in IMG/M
3300017970\|Ga0187783_10522157	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300017973\|Ga0187780_10618309	Not Available	778	Open in IMG/M
3300017973\|Ga0187780_10709537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300017974\|Ga0187777_10776172	Not Available	683	Open in IMG/M
3300017995\|Ga0187816_10023812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2432	Open in IMG/M
3300018058\|Ga0187766_10597928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300018085\|Ga0187772_10957104	Not Available	624	Open in IMG/M
3300018086\|Ga0187769_10599154	Not Available	833	Open in IMG/M
3300018090\|Ga0187770_10936113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300020579\|Ga0210407_10456633	Not Available	999	Open in IMG/M
3300020582\|Ga0210395_10010901	All Organisms → cellular organisms → Bacteria → Proteobacteria	6763	Open in IMG/M
3300020582\|Ga0210395_10044998	Not Available	3231	Open in IMG/M
3300020582\|Ga0210395_10060329	All Organisms → cellular organisms → Bacteria	2782	Open in IMG/M
3300020582\|Ga0210395_10151600	Not Available	1730	Open in IMG/M
3300020582\|Ga0210395_10313905	Not Available	1179	Open in IMG/M
3300020582\|Ga0210395_10366172	Not Available	1084	Open in IMG/M
3300020582\|Ga0210395_10772188	Not Available	717	Open in IMG/M
3300020582\|Ga0210395_10967608	Not Available	631	Open in IMG/M
3300020583\|Ga0210401_10174571	Not Available	2004	Open in IMG/M
3300020583\|Ga0210401_10485804	Not Available	1098	Open in IMG/M
3300021088\|Ga0210404_10511367	Not Available	679	Open in IMG/M
3300021180\|Ga0210396_10316550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1380	Open in IMG/M
3300021180\|Ga0210396_10345196	Not Available	1313	Open in IMG/M
3300021180\|Ga0210396_11704693	Not Available	512	Open in IMG/M
3300021401\|Ga0210393_10186383	Not Available	1675	Open in IMG/M
3300021401\|Ga0210393_11383031	Not Available	563	Open in IMG/M
3300021402\|Ga0210385_10254671	Not Available	1291	Open in IMG/M
3300021403\|Ga0210397_10928014	Not Available	674	Open in IMG/M
3300021404\|Ga0210389_10134539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1914	Open in IMG/M
3300021405\|Ga0210387_10933318	Not Available	762	Open in IMG/M
3300021406\|Ga0210386_10078596	Not Available	2669	Open in IMG/M
3300021406\|Ga0210386_10257898	Not Available	1488	Open in IMG/M
3300021406\|Ga0210386_10275070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1440	Open in IMG/M
3300021407\|Ga0210383_10037259	All Organisms → cellular organisms → Bacteria → Proteobacteria	4058	Open in IMG/M
3300021420\|Ga0210394_11432889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300021432\|Ga0210384_10537316	Not Available	1052	Open in IMG/M
3300021474\|Ga0210390_10389546	Not Available	1178	Open in IMG/M
3300021474\|Ga0210390_11094479	Not Available	647	Open in IMG/M
3300021477\|Ga0210398_10235313	Not Available	1493	Open in IMG/M
3300021477\|Ga0210398_10436736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067	Open in IMG/M
3300021479\|Ga0210410_10324234	Not Available	1381	Open in IMG/M
3300022531\|Ga0242660_1192999	Not Available	556	Open in IMG/M
3300022557\|Ga0212123_10076731	Not Available	2845	Open in IMG/M
3300022557\|Ga0212123_10394497	Not Available	930	Open in IMG/M
3300024227\|Ga0228598_1120745	Not Available	532	Open in IMG/M
3300024271\|Ga0224564_1046740	Not Available	839	Open in IMG/M
3300025898\|Ga0207692_10581667	Not Available	718	Open in IMG/M
3300025915\|Ga0207693_11206698	Not Available	570	Open in IMG/M
3300025933\|Ga0207706_10403165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1186	Open in IMG/M
3300027090\|Ga0208604_1003580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	1455	Open in IMG/M
3300027172\|Ga0208098_1017875	Not Available	691	Open in IMG/M
3300027568\|Ga0208042_1064467	Not Available	932	Open in IMG/M
3300027619\|Ga0209330_1135074	Not Available	558	Open in IMG/M
3300027884\|Ga0209275_10309459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300027895\|Ga0209624_10017979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4489	Open in IMG/M
3300027908\|Ga0209006_10515084	Not Available	996	Open in IMG/M
3300028047\|Ga0209526_10545958	Not Available	749	Open in IMG/M
3300028906\|Ga0308309_10208971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1613	Open in IMG/M
3300030707\|Ga0310038_10410024	Not Available	588	Open in IMG/M
3300031231\|Ga0170824_102555131	Not Available	520	Open in IMG/M
3300031708\|Ga0310686_100159896	Not Available	1407	Open in IMG/M
3300031708\|Ga0310686_100331611	Not Available	525	Open in IMG/M
3300031708\|Ga0310686_100727449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5680	Open in IMG/M
3300031708\|Ga0310686_103239706	Not Available	663	Open in IMG/M
3300031708\|Ga0310686_103766651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38860	Open in IMG/M
3300031708\|Ga0310686_109419068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1752	Open in IMG/M
3300031708\|Ga0310686_116072516	All Organisms → cellular organisms → Bacteria	2773	Open in IMG/M
3300031910\|Ga0306923_10826664	Not Available	1021	Open in IMG/M
3300032076\|Ga0306924_10521772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1351	Open in IMG/M
3300032160\|Ga0311301_10129647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4694	Open in IMG/M
3300032160\|Ga0311301_10359432	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300032160\|Ga0311301_10766662	Not Available	1335	Open in IMG/M
3300032160\|Ga0311301_11556959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	809	Open in IMG/M
3300032160\|Ga0311301_12217657	Not Available	629	Open in IMG/M
3300032896\|Ga0335075_10785248	Not Available	896	Open in IMG/M
3300032896\|Ga0335075_11435768	Not Available	579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.55%
Host-Associated	Host-Associated	6.83%
Engineered	Engineered	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.26%
Aquatic	Environmental → Aquatic	14.29%
Plants	Host-Associated → Plants	6.21%
Fungi	Host-Associated → Fungi	0.62%
Modeled	Engineered → Modeled	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.26%
Freshwater	Environmental → Aquatic → Freshwater	8.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.11%
Sediment	Environmental → Aquatic → Sediment	3.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.24%
Roots	Host-Associated → Plants → Roots	0.62%
Mycelium	Host-Associated → Fungi → Mycelium	0.62%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.80%
Loam	Environmental → Terrestrial → Soil → Loam	17.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.07%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.24%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.62%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.24%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.62%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.36%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.73%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.11%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.11%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.24%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.24%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.62%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.62%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0066.00005680	2166559005	Simulated	SKGMGMMEELHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
E4A_04578620	2170459003	Grass Soil	MGELSMMDELAIEEMSIRAVQEKIDEAFRAAMQRAINAGEEHAATLVSKKPGTRNPKVV
E4A_12343940	2170459003	Grass Soil	LSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
JGI12712J15308_100241001	3300001471	Forest Soil	MDELQLEELSIRRTQEKMDEAFCAAMQRAINGGTEHTLTVVSKQPGTRNPKSVIAA*
JGI12627J18819_101028292	3300001867	Forest Soil	MMDELQLEELSVRMTIVKMDDAFCEALERAIDAGTENSPTVVSKQPGARNPKHLPRR*
JGI12627J18819_104025592	3300001867	Forest Soil	MDELQLEELSIRRTQERMDEAFCAAMQKAIDAGTEHTLTVVSKQPGTRNPKSVIAA*
JGIcombinedJ26739_10000726815	3300002245	Forest Soil	MMDELVIEELAVRAIQEKMDDAFRAAMHRAINAGEEVTQTVVSKKPGTRNPKFVVA*
JGIcombinedJ26739_1006959202	3300002245	Forest Soil	MRDDELFSEEMSLRAVQEKMDEAFCAAMQRAIDAGDENTPTIVSKKPGTKNPMIVFV*
JGIcombinedJ26739_1014537712	3300002245	Forest Soil	MMDELQLEELSIRRTQEKMDEAFCAAMQRAINGGTEHTLTVVSKQPGTRNPKSVIAA*
JGIcombinedJ51221_100161532	3300003505	Forest Soil	MDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA*
JGIcombinedJ51221_100575933	3300003505	Forest Soil	MVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW*
Ga0062389_1025425121	3300004092	Bog Forest Soil	AAPPRPLSMMDELVIEERAVRRRQEKMDDAFRAAMQRAINAGEENALTVVSKKPGARNPKMVLA*
Ga0066388_1013572982	3300005332	Tropical Forest Soil	MDELHLEEVSLRITVEKMDEAFRPAIHRAIVAGEEKIPTVVAKQPGTRNPKHIVTV*
Ga0070709_118106442	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TRSLFYRLAAMRDELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA*
Ga0070686_1018021841	3300005544	Switchgrass Rhizosphere	MEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPIVVSKKPGTRYPKSIIAT*
Ga0066903_1084566502	3300005764	Tropical Forest Soil	MMDELLIEELSVRAIQQKMDEAFRAAMQRAINAGEENTPTAVSKKPGTRNPKVVLG*
Ga0070766_103250052	3300005921	Soil	MRDELVIEKMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA*
Ga0070766_106941382	3300005921	Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKPGTRNPKSIIAT*
Ga0070766_111134961	3300005921	Soil	MDDLHLEELSLRMTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA*
Ga0070717_116570242	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTDELVIEEMSIRALLEKMDQAFCAAMQRAISLGEEKAATVVSKKPGTRNPKIVLA*
Ga0075026_1010070542	3300006057	Watersheds	MMDELQLEELSIRRTQERMDEAFCAAMQKAIDAGTEHTLTVVSKQPGTRNPKSVIAA*
Ga0075017_1001284872	3300006059	Watersheds	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRNPKSTLAA*
Ga0075017_1003768782	3300006059	Watersheds	MMDELVIEEMSIRAVQEKMDEAFRAAMQRAINAGEEHAATVVSKKPGTRNPRVVLS*
Ga0075017_1004074123	3300006059	Watersheds	MMTDELVIEEMSTRVTQEKMDDAFRAAMHRAIKAGEEIAPTVVSKMPGTRRPKVVLV*
Ga0075017_1006886761	3300006059	Watersheds	MLPRPSKGMGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPTVVSKKPGTRNPKSIIAA*
Ga0070712_1017221202	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVSELAIEEVSVRAIHQKMDEASKVALQRAINAGEENSPTVVSKKPGTKSPKIISALL*
Ga0070765_1001485823	3300006176	Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEEKTPTVVSKKPGTRNPKSIIAA*
Ga0073928_100804672	3300006893	Iron-Sulfur Acid Spring	MMDELVIEELTVRAVQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKVVLAEPGRNLSR*
Ga0073928_101942813	3300006893	Iron-Sulfur Acid Spring	IEELAMRAIKEKMDDAFRAAMQRAINAGEEVTQTVVSKKPGTRNPKFVVA*
Ga0073928_102278382	3300006893	Iron-Sulfur Acid Spring	VGLLHKADIAMDELLIEELSVRAIQEKMDVAFRAAMQRAINAGDENTPTVVSKKPGTRNPKVVLA*
Ga0075424_1024506461	3300006904	Populus Rhizosphere	MGELAMMDELVIEEMSIRAVLEKMDEAFCAAMQRAISVGEERASTVVSKKPGTRHPKVVLA*
Ga0105243_120439781	3300009148	Miscanthus Rhizosphere	MGTMEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPTVVSKKPGTRYPKSIIAT*
Ga0116222_10726741	3300009521	Peatlands Soil	MMDELAIEEMSFRAIQEKMVDAFRAAMQRAINKGEKHAATASSKKPGTRYPKVILA*
Ga0116222_11823591	3300009521	Peatlands Soil	MMDKQAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA*
Ga0116218_10421523	3300009522	Peatlands Soil	MGMMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPNVVSKKPGTRNPKSIIAA*
Ga0116218_12028013	3300009522	Peatlands Soil	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRN
Ga0116218_12270952	3300009522	Peatlands Soil	MGELAMMDELVIEEMSIRAVQEKMDEAFRVAMQRAIKAGEEHAATVVSKKPGTRNPRVVSS*
Ga0116218_15173371	3300009522	Peatlands Soil	MMDELVIEEMSMRAVQEKMDEAFRAAMQRAINAGEEHAATVVSKKPGTRNPRIVSS*
Ga0116220_102462852	3300009525	Peatlands Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGGEKTPTVVSKKPGTRNPKSVIAA*
Ga0116138_10947302	3300009552	Peatland	MMDELAIEELSVRATQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA*
Ga0105249_116254792	3300009553	Switchgrass Rhizosphere	MGTMEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPIVVSKKPGTRYPKSIIAT*
Ga0116224_101140603	3300009683	Peatlands Soil	MMDELAIEEMSFRAIQEKMVDAFRAAMQRAINKGEKHAATASSKKPGTRYPKVVLA*
Ga0116217_105435541	3300009700	Peatlands Soil	EQGRETMDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRNPKSTLAA*
Ga0116217_106422432	3300009700	Peatlands Soil	GRETMDELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPTVVSKKPGTRNPKSIIAA
Ga0116134_11492953	3300009764	Peatland	MMDKLAMEELSVRAIQEKMDEAFRVAMQRAINAGEENTPTVVSKKPGTRNPKFVLA*
Ga0116219_101171172	3300009824	Peatlands Soil	MMDKLAMEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA*
Ga0134125_111573191	3300010371	Terrestrial Soil	MFAVRVRDGTMEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPIVVSKKPGTRYPKSIIAT*
Ga0134128_105832613	3300010373	Terrestrial Soil	SLRMTQEKMDEAFRAAMQRAIDAGEENTPTVVSKKPGTRYPKSIIAT*
Ga0136449_10000904516	3300010379	Peatlands Soil	MMDELAIEEMSFRAIQEKMIDAFRAAMQRAINKGEKHAATASSKKPGTRYPKVILA*
Ga0136449_1001888802	3300010379	Peatlands Soil	MGELAMMDELVVEEMSIRAVQEKMDEAFRVAMQRAIKAGEEHAATVVSKKPGTRNPRVVSS*
Ga0136449_1004715542	3300010379	Peatlands Soil	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKAPTVVSKKPGTRNPKSTLAA*
Ga0136449_1010782962	3300010379	Peatlands Soil	MGMMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPTVVSKKPGTRNPKSIIAA*
Ga0136449_1012272942	3300010379	Peatlands Soil	MGMMDELYIEEMSLRATQERMDEAFRAAMQRAIDAGAENTPTVVSKKPGTKNPKTVTAA*
Ga0134126_116808861	3300010396	Terrestrial Soil	MGTMDELHFEELSLRAAQEKMDDAFRTAMRRAIDAGEENTTTVVSKKPGTRYPKSIIAT*
Ga0153922_10700761	3300012181	Attine Ant Fungus Gardens	MMDELLIEELALRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVSA*
Ga0164300_100466963	3300012951	Soil	MGPFSMVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW*
Ga0164300_100920171	3300012951	Soil	MRDELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA*
Ga0164303_101526833	3300012957	Soil	LPDLKPRVDPSVDAARRGTMDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA*
Ga0164299_101258952	3300012958	Soil	MDDLHFEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA*
Ga0164299_101696851	3300012958	Soil	MGPFSMVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKINAALW*
Ga0164301_100628962	3300012960	Soil	MGSRYRQGDAELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA*
Ga0164301_103639141	3300012960	Soil	MVSELAVEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW*
Ga0164302_119119322	3300012961	Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKPGTRNPKSIIAA*
Ga0164305_102982033	3300012989	Soil	MVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKI
Ga0163163_108708702	3300014325	Switchgrass Rhizosphere	METIDELRFDELSLRMTQEKMDDAFRAAMQRAIDAGEEKTPIEVSKKPGTRNPKSIIAA*
Ga0181522_105848722	3300014657	Bog	MGTMDDIHLEELSVRMMLMKMDDAFCEALLRAIDAGVENAPTVTSKVPGTRNPKTLTAA*
Ga0157379_109321722	3300014968	Switchgrass Rhizosphere	MGTMEELHLEELSLRMTQEKMDDAFRTAMPRAIDAGEEKASAVVSKNP
Ga0132258_105838326	3300015371	Arabidopsis Rhizosphere	MDELHLDELSLPMTQEKMDEAFRTAMQRAIDAGEEKTPTVVSKKPGTRNPQRAVTT*
Ga0132258_111933394	3300015371	Arabidopsis Rhizosphere	MDEFHLDELSVRIMQEKMDYAFCTAMQRAIDAGEEQVPTVVSKQPGTRSPKSTITI*
Ga0132256_1004821063	3300015372	Arabidopsis Rhizosphere	VRVRVRDWETMDELHLDELSLRMTQEKMDEAFRTAMQRAIDAGEEKTPTVVSKKPGTRNPQRAVTT*
Ga0182038_105088312	3300016445	Soil	MTDEIAIEEVSLRAVQQKMDEAFRAAMARAISMGEENTLTVVSKKPNTRNPKVVVA
Ga0187818_103711141	3300017823	Freshwater Sediment	MMDELAIEELSVRATQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Ga0187848_104491452	3300017935	Peatland	MMDKQAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Ga0187819_106020212	3300017943	Freshwater Sediment	MMDGAEIEEMSLRAVQEKMEEAFRVRLQKAINAGEEHAVTVVSKKPGMRNPKLVLS
Ga0187819_106383621	3300017943	Freshwater Sediment	MMDKLAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Ga0187819_107476642	3300017943	Freshwater Sediment	MMDELVIEEMSIRAVQEKMDEAFRAAMQRAINAGEEHAATVVSKKPGTRNPRIVSS
Ga0187817_105218372	3300017955	Freshwater Sediment	MGMMDELYIEEMSLRATQERMDEAFRAAMQRAIDAGAENTPTVVSKKPGTKNPKIVTAA
Ga0187817_106232921	3300017955	Freshwater Sediment	MMDELAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Ga0187779_102908581	3300017959	Tropical Peatland	MVDELVLEEKSLRAMQQKMDNAFCAAMQRAINAGEENTPTDVSKKPGTKKPKIVFA
Ga0187778_108249602	3300017961	Tropical Peatland	LVDELVLEEKSLRAMQRKMDDAFCAAMQRAINAGEENTPTVVSKKPGTKKPKIVLAY
Ga0187783_100073714	3300017970	Tropical Peatland	MVDELVLEEKSLRAMQRKMDDAFCAAMQRAIKAGEENTPTVVSKKPGTKKPKVVFA
Ga0187783_105221571	3300017970	Tropical Peatland	MMDELVIEEKSLRALLEEMDEAFCAAMQRAISLGEERASTVVSKKPGTRNPKIVLA
Ga0187780_106183092	3300017973	Tropical Peatland	MVDELVLEEISLRAMQQKMDDAFRAAMQRAIRAGEENTPTVVSKKPGTKKPKIVFA
Ga0187780_107095372	3300017973	Tropical Peatland	LVLEEKSLRAMQRKMDDAFCAAMQRAINAGEENTPTVVSKKPGTKKPKIVLAY
Ga0187777_107761721	3300017974	Tropical Peatland	MRDELFIEEMSLRVAKERMDEAFRAAMQGAIDAGEENAPTVISKKPGTRNPKVVRLSM
Ga0187816_100238121	3300017995	Freshwater Sediment	MRDELVIEEMAVRAMQEKMDEAFRAAMERAISKGEEKTPTIVSKRPGTKNPRVVFA
Ga0187816_100358781	3300017995	Freshwater Sediment	MSFRAIQEKMVDAFRAAMQRAINAGKEQAATVVSKKPGTRKPKVVLA
Ga0187766_105979282	3300018058	Tropical Peatland	MVDELVLEEKSLRAMQRKMDDAFCAAMQRAINAGEENTPTVVSKKPGTKKPKIVLAY
Ga0187772_109571042	3300018085	Tropical Peatland	MMNELLIEELSARATQEKMDEAFRAAMQRAIDAGEENAPAAVSKKPGTRNPKVVLG
Ga0187769_105991542	3300018086	Tropical Peatland	LVDELVLEEKSLRAMQRKMDDAFCAAMQRAINAGEESTPTVVSKKPGTKKPKIVFA
Ga0187770_109361131	3300018090	Tropical Peatland	VDELVLEEKSLRAMQRKMDDAFCAAMQRAINAGEESTPTVVSKKPGTKKPKIVFA
Ga0210407_104566333	3300020579	Soil	MDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
Ga0210395_100109012	3300020582	Soil	MMDELLIEELALRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVSA
Ga0210395_100449981	3300020582	Soil	TSSRLHLEELSVRMNIVKMDDAFCEALQRAIDAGRENAPTVASKQPGTRNPKTLTAA
Ga0210395_100603293	3300020582	Soil	MMDELQLEELSIRRTQEKLDEAFCAAMQGAINAGTEHTPTVVSKQPGTRNPKSVIAA
Ga0210395_101516002	3300020582	Soil	MDELQLEELSIRRTQERMDEAFCAAMQKAIDAGTEHTLTVVSKQPGTRNPKSVIAA
Ga0210395_103139053	3300020582	Soil	MVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW
Ga0210395_103661722	3300020582	Soil	MIMDELQLEELSIRRTQEKMDEAFCVAMQRAIDAGTEHTLTVVSKQPGRRCPPTI
Ga0210395_107721881	3300020582	Soil	MDDLHLEELSLRMTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
Ga0210395_109676082	3300020582	Soil	MRDEMVIEELAVRAIQERMDEAFRTAMQRAVEAGQENTPTVISKKPGTKYPKVVFAV
Ga0210401_101745714	3300020583	Soil	MMDELHLEELSVRMNIVKMDDAFCEALQRAIDAGRENAPTVASKQPGIRNPKTLTAA
Ga0210401_104858041	3300020583	Soil	MMDELLIEELAVRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVSA
Ga0210404_105113671	3300021088	Soil	MGSRYRQGDAELVIEEMVVCAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0210396_103165503	3300021180	Soil	MMDELQLEELSIRRTQEKMDEAFCAAMQRAINGGTEHTLTVVSKQPGTRNPKSVIAA
Ga0210396_103451961	3300021180	Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKPGTRNPKSMIAT
Ga0210396_117046932	3300021180	Soil	MVRPTKWGMGTMAELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKTPSVVSRKPGTRNPKSTITA
Ga0210393_101863831	3300021401	Soil	MVRPTKWGMGTMDELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKTPSVVSRKPGTRNPKSTITA
Ga0210393_113830311	3300021401	Soil	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRNPKSTLAA
Ga0210385_102546712	3300021402	Soil	MMDELHLEELSVRMNIVKMDDAFCEALQRAIDAGRENAPTVASKQPGTRNPKTLTAA
Ga0210397_109280141	3300021403	Soil	TRSLFYRLAAMRDELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0210389_101345393	3300021404	Soil	MEELHLEELSLRMTQEKMDDAFRTAMQRAIDAVEENTPTVVSKKPGTRNPKSMIAT
Ga0210387_109167071	3300021405	Soil	MVRPTKWGMGTMDELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKT
Ga0210387_109333182	3300021405	Soil	TTKVGMGTMDELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKTPSVVSRKPGTRNPKSTITA
Ga0210386_100785967	3300021406	Soil	MDELQLEELSIRRTQEKMDEAFCVAMQRAIDAGTEHMLTVVSKQPGTSNPKSVIA
Ga0210386_102578983	3300021406	Soil	MGSRYRQGDAELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0210386_102750703	3300021406	Soil	MGPFSKVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW
Ga0210383_100372593	3300021407	Soil	MDELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKTPSVVSRKPGTRNPKSTITA
Ga0210394_114328892	3300021420	Soil	MVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSK
Ga0210384_105373161	3300021432	Soil	QGVGTMEELLLEELSLRMTQERMDDAFCAAVQRAIDAGEENTPTVVSKKPGTRNPKSIIA
Ga0210390_101799352	3300021474	Soil	MEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSRSPAP
Ga0210390_103895463	3300021474	Soil	MMDELHREELSVRMMLVKMDDAFCEALQRAINAGTENVTTVVSKQPGTRNPKTLTAA
Ga0210390_110944791	3300021474	Soil	RLAAMRDELVIEEMVVRAIQERMDEGFRAAMQRAIDTGEENTSTVVSKKPGTKYP
Ga0210398_102353131	3300021477	Soil	MEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKPGTRNPKSIIAT
Ga0210398_102727021	3300021477	Soil	MMDELLIEELALRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKK
Ga0210398_104367361	3300021477	Soil	MDELQLEELSIRRTQEKLDEAFCAAMQGAINAGTEHTPTVVSKQPGTRNPKSVIAA
Ga0210410_103242341	3300021479	Soil	RVDPSVDAARRGTMDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
Ga0242660_11929991	3300022531	Soil	SELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW
Ga0212123_100767315	3300022557	Iron-Sulfur Acid Spring	MMDELVIEELTVRAVQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKVVLAEPGRNLSR
Ga0212123_103944971	3300022557	Iron-Sulfur Acid Spring	VGLLHKADIAMDELLIEELSVRAIQEKMDVAFRAAMQRAINAGDENTPTVVSKKPGTRNPKVVLA
Ga0228598_11207451	3300024227	Rhizosphere	MMDELLIEELVVRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVSA
Ga0224564_10467402	3300024271	Soil	MDELLTEELAVRRLQEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVLA
Ga0207692_105816671	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPIVVSKKPGTRYPKSIIAT
Ga0207693_112066982	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRDELVIEKMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0207706_104031653	3300025933	Corn Rhizosphere	MEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPTVVSKKPGTRYPKSIIAT
Ga0208604_10035803	3300027090	Forest Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKP
Ga0208098_10178752	3300027172	Forest Soil	NSFSAILQYTGEMGSRYRQGDAELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0208042_10644671	3300027568	Peatlands Soil	MMDELAIEEMSFRAIQEKMVDAFRAAMQRAINKGEKHAATASSKKPGTRYPKVILA
Ga0209330_11350741	3300027619	Forest Soil	MMDELQLEELSIRRTQERMDEAFCAAMQKAIDAGTEHTLTVVSKQPGTRNPKSVIAA
Ga0209275_103094591	3300027884	Soil	MMDELQLEELSIRRTQEKMDEAFCAAMQGAINAGTEHTPTVVSKQPGTRNPKSVIAA
Ga0209624_100179795	3300027895	Forest Soil	MMDELVIEELAVRAIQEKMDDAFRAAMHRAINAGEEVTQTVVSKKPGTRNPKFVVA
Ga0209006_105150841	3300027908	Forest Soil	MRDDELFSEEMSLRAVQEKMDEAFCAAMQRAIDAGDENTPTIVSKKPGTKNPMIVFV
Ga0209526_105459581	3300028047	Forest Soil	MDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAAQAWHSARNRPQQA
Ga0308309_102089713	3300028906	Soil	MLPRPSKGMGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEEKTPTVVSKKPGTRNPKSIIAA
Ga0310038_104100242	3300030707	Peatlands Soil	MMDKQAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFV
Ga0170824_1025551311	3300031231	Forest Soil	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRNPKSTLAS
Ga0310686_1001598962	3300031708	Soil	MMDELLMEELVVRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVLA
Ga0310686_1003316111	3300031708	Soil	MMDELVIEELAVRAIQEKMDDAFRAAMQRAINAGDENTPTVVSKKPGTRNPKVVLAEPGPNLSRSSGRRCPR
Ga0310686_1007274497	3300031708	Soil	MMDEVLIEELAVRRPHEKMDDAFRAAMQRAINAGEETTPTVVSKKPGTRIPKIVSA
Ga0310686_1032397061	3300031708	Soil	VKLLHKADIAMDELLIEELSVRAIQEKMDVAFRAAMQRAINAGDENTPTVVSKKPGTRNPKVVLA
Ga0310686_10376665138	3300031708	Soil	MMDELLIEELAVRRLQEKMDEAFRAAMQKAINAGEETTPTVVSKNPGT
Ga0310686_1094190682	3300031708	Soil	MRDDELFSEEMSLRAVQEKMDEAFCAAMQRAIDAGEENTPTVVSKKAGTKNPMIVFV
Ga0310686_1160725165	3300031708	Soil	MMDELQLEELSIRRNQEKMDEAFCAAMQGAINAGIEHTPTVVSRQPGTRSPKSVIAA
Ga0306923_108266643	3300031910	Soil	MTDEIAIEEVSLRAVQQKMDEAFRAAMARAISMGEENTPTVVSKKPGTRNPKVVVA
Ga0306924_105217723	3300032076	Soil	MTDEIAIEEVSLRAVQQKMDEAFRAAMTRAISMGEENTPTVVSKKPGTRNPKVVVA
Ga0311301_101296479	3300032160	Peatlands Soil	MMDELVIEEMSMRAVQEKMDEAFRAAMQRAINAGEEHAATVVSKKPGTRNPRIVSS
Ga0311301_103594322	3300032160	Peatlands Soil	MMDELVIEEMSIRAVQEKMDEAFRVAMQRAIKAGEEHAATVVSKKPGTRNPRVVSS
Ga0311301_107666621	3300032160	Peatlands Soil	GMGMMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPTVVSKKPGTRNPKSIIAA
Ga0311301_115569592	3300032160	Peatlands Soil	MGMMDELYIEEMSLRATQERMDEAFRAAMQRAIDAGAENTPTVVSKKPGTKNPKTVTAA
Ga0311301_122176572	3300032160	Peatlands Soil	MLPRPSKGMGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGGEKTPTVVSKKPGTRNPKSVIAA
Ga0335075_107852482	3300032896	Soil	MDELHLEELSVRMNIVKMDDAFCEALQRAIDAGRENAPTVASKQPGTRNPKTLTAA
Ga0335075_114357681	3300032896	Soil	MMDELHLEELSVRMMLVRMDDAFCEALERAINAGTEMATVVSKQPGTRNPKTLAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences