Metagenome / Metatranscriptome Family F040749

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040749
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	50 residues
Representative Sequence	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGL
Number of Associated Samples	77
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.19 %
% of genes near scaffold ends (potentially truncated)	50.93 %
% of genes from short scaffolds (< 2000 bps)	60.25 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.522 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.509 % of family members)
Environment Ontology (ENVO)	Unclassified (73.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.248 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.58% β-sheet: 10.53% Coil/Unstructured: 57.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF03401	TctC	12.42
PF02518	HATPase_c	8.70
PF12323	HTH_OrfB_IS605	3.73
PF03457	HA	3.11
PF13924	Lipocalin_5	3.11
PF13676	TIR_2	2.48
PF10117	McrBC	1.86
PF07045	DUF1330	1.24
PF02683	DsbD	1.24
PF01702	TGT	1.24
PF03797	Autotransporter	1.24
PF02852	Pyr_redox_dim	1.24
PF04392	ABC_sub_bind	1.24
PF13185	GAF_2	0.62
PF03466	LysR_substrate	0.62
PF00884	Sulfatase	0.62
PF09351	DUF1993	0.62
PF14026	DUF4242	0.62
PF13374	TPR_10	0.62
PF00692	dUTPase	0.62
PF05148	Methyltransf_8	0.62
PF13428	TPR_14	0.62
PF03354	TerL_ATPase	0.62
PF09609	Cas_GSU0054	0.62
PF00565	SNase	0.62
PF00271	Helicase_C	0.62
PF07992	Pyr_redox_2	0.62
PF13379	NMT1_2	0.62
PF13458	Peripla_BP_6	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	12.42
COG0343	Queuine/archaeosine tRNA-ribosyltransferase	Translation, ribosomal structure and biogenesis [J]	1.24
COG1549	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains	Translation, ribosomal structure and biogenesis [J]	1.24
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.24
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.24
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.62
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.62
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.62
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
All Organisms	root	All Organisms	43.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
cellular organisms	root	All Organisms → cellular organisms	43.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.30 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.22 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.62 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.35 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.62 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.97 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.62 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.62 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.73 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	1.24 %
Thiocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis	0.62 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.62 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.24 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.62 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.62 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.62 %
Bradyrhizobium yuanmingense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	0.62 %
Thiocystis violacea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violacea	0.62 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.62 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.24 %
Bradyrhizobium sp. AT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	0.62 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.62 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.62 %
Bradyrhizobium yuanmingense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	0.62 %
Thiocystis violacea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violacea	0.62 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.62 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02G4XX6	Not Available	500	Open in IMG/M
3300005332\|Ga0066388_100002546	All Organisms → cellular organisms → Bacteria → Proteobacteria	11218	Open in IMG/M
3300005332\|Ga0066388_100205730	All Organisms → cellular organisms → Bacteria	2591	Open in IMG/M
3300005332\|Ga0066388_104703550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300005363\|Ga0008090_15809702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300005713\|Ga0066905_100497506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300005713\|Ga0066905_101963163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	542	Open in IMG/M
3300005713\|Ga0066905_102183093	Not Available	516	Open in IMG/M
3300005764\|Ga0066903_100039785	All Organisms → cellular organisms → Bacteria	5523	Open in IMG/M
3300005764\|Ga0066903_100336045	Not Available	2427	Open in IMG/M
3300005764\|Ga0066903_101987836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300005764\|Ga0066903_102194818	Not Available	1065	Open in IMG/M
3300005764\|Ga0066903_103675022	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005764\|Ga0066903_104256191	Not Available	765	Open in IMG/M
3300005764\|Ga0066903_105672148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300006175\|Ga0070712_101994192	Not Available	508	Open in IMG/M
3300009792\|Ga0126374_11016312	Not Available	651	Open in IMG/M
3300010046\|Ga0126384_10271889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1380	Open in IMG/M
3300010046\|Ga0126384_10874729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	810	Open in IMG/M
3300010048\|Ga0126373_11674605	Not Available	700	Open in IMG/M
3300010358\|Ga0126370_10383005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300010358\|Ga0126370_11405722	Not Available	659	Open in IMG/M
3300010359\|Ga0126376_11627741	Not Available	679	Open in IMG/M
3300010360\|Ga0126372_12489380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300010361\|Ga0126378_10238361	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300010361\|Ga0126378_10432686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1430	Open in IMG/M
3300010361\|Ga0126378_11023356	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300010361\|Ga0126378_12482034	Not Available	592	Open in IMG/M
3300010361\|Ga0126378_12559891	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300010362\|Ga0126377_13571672	Not Available	503	Open in IMG/M
3300010376\|Ga0126381_103385348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300010868\|Ga0124844_1030919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1709	Open in IMG/M
3300012361\|Ga0137360_11391396	Not Available	604	Open in IMG/M
3300012971\|Ga0126369_12436495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300016270\|Ga0182036_10023739	All Organisms → cellular organisms → Bacteria → Proteobacteria	3543	Open in IMG/M
3300016270\|Ga0182036_11170059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300016270\|Ga0182036_11644066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	541	Open in IMG/M
3300016294\|Ga0182041_10201330	All Organisms → cellular organisms → Bacteria → Proteobacteria	1586	Open in IMG/M
3300016294\|Ga0182041_10349140	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300016319\|Ga0182033_10516301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1028	Open in IMG/M
3300016341\|Ga0182035_10027011	All Organisms → cellular organisms → Bacteria	3658	Open in IMG/M
3300016341\|Ga0182035_10638035	Not Available	923	Open in IMG/M
3300016357\|Ga0182032_10008761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	5341	Open in IMG/M
3300016371\|Ga0182034_10163280	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300016371\|Ga0182034_11636874	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300016387\|Ga0182040_11157602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300016404\|Ga0182037_10202580	Not Available	1540	Open in IMG/M
3300016404\|Ga0182037_10703219	Not Available	865	Open in IMG/M
3300016404\|Ga0182037_12019890	Not Available	518	Open in IMG/M
3300016422\|Ga0182039_11844818	Not Available	554	Open in IMG/M
3300016445\|Ga0182038_10302756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1308	Open in IMG/M
3300027502\|Ga0209622_1027783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1003	Open in IMG/M
3300029636\|Ga0222749_10463429	Not Available	681	Open in IMG/M
3300031543\|Ga0318516_10084418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1776	Open in IMG/M
3300031543\|Ga0318516_10274502	Not Available	974	Open in IMG/M
3300031546\|Ga0318538_10690879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300031573\|Ga0310915_10052645	All Organisms → cellular organisms → Bacteria → Proteobacteria	2633	Open in IMG/M
3300031573\|Ga0310915_10800857	Not Available	663	Open in IMG/M
3300031681\|Ga0318572_10082318	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300031682\|Ga0318560_10535967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300031719\|Ga0306917_10020374	All Organisms → cellular organisms → Bacteria → Proteobacteria	4078	Open in IMG/M
3300031719\|Ga0306917_10097734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2099	Open in IMG/M
3300031719\|Ga0306917_10240534	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300031719\|Ga0306917_11473896	Not Available	524	Open in IMG/M
3300031744\|Ga0306918_10498860	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300031744\|Ga0306918_11097797	Not Available	616	Open in IMG/M
3300031747\|Ga0318502_10340587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	886	Open in IMG/M
3300031751\|Ga0318494_10411632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	785	Open in IMG/M
3300031771\|Ga0318546_10552998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300031798\|Ga0318523_10505610	Not Available	598	Open in IMG/M
3300031805\|Ga0318497_10635172	Not Available	599	Open in IMG/M
3300031819\|Ga0318568_10418422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300031835\|Ga0318517_10415186	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031845\|Ga0318511_10212778	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300031860\|Ga0318495_10503769	Not Available	528	Open in IMG/M
3300031879\|Ga0306919_10014231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4610	Open in IMG/M
3300031890\|Ga0306925_10223397	All Organisms → cellular organisms → Bacteria	2031	Open in IMG/M
3300031890\|Ga0306925_10389474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1494	Open in IMG/M
3300031890\|Ga0306925_11503709	Not Available	659	Open in IMG/M
3300031890\|Ga0306925_11801616	Not Available	586	Open in IMG/M
3300031897\|Ga0318520_10058189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2057	Open in IMG/M
3300031910\|Ga0306923_11210146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violacea	807	Open in IMG/M
3300031910\|Ga0306923_12120592	Not Available	566	Open in IMG/M
3300031912\|Ga0306921_11573895	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300031912\|Ga0306921_11598948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	708	Open in IMG/M
3300031912\|Ga0306921_12345739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031941\|Ga0310912_11308524	Not Available	549	Open in IMG/M
3300031942\|Ga0310916_10106053	All Organisms → cellular organisms → Bacteria → Proteobacteria	2264	Open in IMG/M
3300031942\|Ga0310916_11480661	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031942\|Ga0310916_11655002	Not Available	518	Open in IMG/M
3300031946\|Ga0310910_11418267	Not Available	534	Open in IMG/M
3300031947\|Ga0310909_10227957	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031947\|Ga0310909_11570096	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031954\|Ga0306926_10042241	All Organisms → cellular organisms → Bacteria → Proteobacteria	5416	Open in IMG/M
3300031954\|Ga0306926_12148315	Not Available	623	Open in IMG/M
3300031954\|Ga0306926_12492271	Not Available	567	Open in IMG/M
3300031954\|Ga0306926_13011059	Not Available	503	Open in IMG/M
3300032044\|Ga0318558_10060239	Not Available	1703	Open in IMG/M
3300032051\|Ga0318532_10019165	All Organisms → cellular organisms → Bacteria → Proteobacteria	2194	Open in IMG/M
3300032059\|Ga0318533_10855660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	667	Open in IMG/M
3300032059\|Ga0318533_11000587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300032076\|Ga0306924_10505213	Not Available	1376	Open in IMG/M
3300032076\|Ga0306924_12614506	Not Available	503	Open in IMG/M
3300032089\|Ga0318525_10299015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300032091\|Ga0318577_10028447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2395	Open in IMG/M
3300032091\|Ga0318577_10097772	Not Available	1371	Open in IMG/M
3300032091\|Ga0318577_10585588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300032094\|Ga0318540_10611864	Not Available	525	Open in IMG/M
3300032261\|Ga0306920_101826273	Not Available	857	Open in IMG/M
3300032261\|Ga0306920_103960355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	538	Open in IMG/M
3300033289\|Ga0310914_10235751	Not Available	1642	Open in IMG/M
3300033289\|Ga0310914_10871499	Not Available	800	Open in IMG/M
3300033289\|Ga0310914_11495624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300033289\|Ga0310914_11739820	Not Available	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.38%
Host-Associated	Host-Associated	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.38%
Fungi	Host-Associated → Fungi	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.38%
Mycelium	Host-Associated → Fungi → Mycelium	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.20%
Loam	Environmental → Terrestrial → Soil → Loam	11.18%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.62%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.62%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.62%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_03212140	2170459005	Grass Soil	AAFRQRRAGDTAWWRERVRCGRAVYPVEVDETTFQLMERFAGLNFGHFSH
Ga0066388_10000254614	3300005332	Tropical Forest Soil	MAKTAAQRHRRVADTQAWRARQKRGAAVYAVEVDGEVFDLMERFGGVKFEVQ*
Ga0066388_1002057303	3300005332	Tropical Forest Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGVKLEVQ*
Ga0066388_1047035502	3300005332	Tropical Forest Soil	MAKKKTAAQRQRRVDDTRAWRARQKRGAAVYPVKVDGTTFNLLERFGGLDWQGG*
Ga0008090_158097022	3300005363	Tropical Rainforest Soil	MVQKTAAFRQRRAADTARWRERLQRGACVLPVEADAMTFDLMERFGGLKDSKTGDR
Ga0066905_1004975063	3300005713	Tropical Forest Soil	MAEKSTAYRERRAADTARWRERRERGAAVYPVVIDGTTFDLMERFAGLTQDKVDDRNAVSAALSR
Ga0066905_1019631632	3300005713	Tropical Forest Soil	MVRSEAARRRRADDTRRWREGLHRGAAVYPLEVDGTTFDLMERFGGLRDSNIGDRQAIAT
Ga0066905_1021830931	3300005713	Tropical Forest Soil	MWPKGWEMGEKTAAFRQRRAADTARWRERVAQGRACYTVEVDGRTFDLMERLVGLPTSK
Ga0066903_1000397852	3300005764	Tropical Forest Soil	MVKKTAAFRRRRAADTARWRERLHRGPAVYPVEVDGTTFDLIERFGGVKLEVQ*
Ga0066903_1003057071	3300005764	Tropical Forest Soil	MVEKTAAFKQRRAADTARWRERLHRGAAVYPVEVDG
Ga0066903_1003360456	3300005764	Tropical Forest Soil	MARSAAQRQLRVQGNQRWRERLKRSAAVYPIEVDGELFNLMERFGGVKFEVQ*
Ga0066903_1019878362	3300005764	Tropical Forest Soil	MVEKTAAFRQRRAPDTARWRERLERGAAVYPVEVDRTTFDLRGRYGGLKDSKTGDRQAVAITLPSEIRRHST*
Ga0066903_1021948181	3300005764	Tropical Forest Soil	MVEKNAAFRHRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGLK
Ga0066903_1036750222	3300005764	Tropical Forest Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVNGTTFDLMERFGGVTLEAQ*
Ga0066903_1042561912	3300005764	Tropical Forest Soil	MVEKTAAFRKRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGVTLEVQ*
Ga0066903_1056721482	3300005764	Tropical Forest Soil	MVKKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMER
Ga0070712_1019941921	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPVEKTAAFKERRAADTARWRERLYRGAAVYPVEVDGTTFDLMERFGGLKDSKTADRQ
Ga0126374_102817341	3300009792	Tropical Forest Soil	MVEKTAAFRQRRAADTARWRERLQRGMAVYPVEIDGMTFDLM
Ga0126374_110163121	3300009792	Tropical Forest Soil	MAKTAAQRHRRVADTQAWRARQKRGAAVYAVEVDGEVFDLMERFGGVKFEV
Ga0126384_102718892	3300010046	Tropical Forest Soil	MAKKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFG
Ga0126384_108747292	3300010046	Tropical Forest Soil	MVEKTPAFRQRRAADTARWRVRLARGAAVYPVEVDGQLFDMMERFGELKDSKTGDRQAVA
Ga0126373_116746052	3300010048	Tropical Forest Soil	MVEKTAAFKQRRAADSARSRERLHRGAAVYPVEVDGELFDLMERFGGVIFEVQ*
Ga0126370_103830052	3300010358	Tropical Forest Soil	MVKKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGLRDSKTGDRQA
Ga0126370_114057221	3300010358	Tropical Forest Soil	MVEKTAAFRQRRAADTARWRERLERGAAVYPVEVDGMMFDLMEQFAGLKAGKADDRRV
Ga0126376_116277412	3300010359	Tropical Forest Soil	MVEKNAAFRHRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGLKESKTGDRRAVATALG
Ga0126372_124893801	3300010360	Tropical Forest Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGELFDLMELFGGVKFEVQ*
Ga0126378_102383612	3300010361	Tropical Forest Soil	MVEKTAAFKQRRAADTARWRERLQRGACVLPVEADATTFDLMERFGGLKDRKPRGVPGL*
Ga0126378_104326861	3300010361	Tropical Forest Soil	MVEKIAAFRQRRAADTRRWRERLHRGAAVYPVEVDGTTFDLTARFGGVKLKVQ
Ga0126378_110233562	3300010361	Tropical Forest Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDALAFDLMERFAGLKASKVDDRQAV
Ga0126378_124820341	3300010361	Tropical Forest Soil	MVEKTAAFKQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMER
Ga0126378_125598912	3300010361	Tropical Forest Soil	MWPKGWEMGEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGMTFDLMERFGGLKDSKTGDRR
Ga0126377_135716721	3300010362	Tropical Forest Soil	MVEKSAAFRRRRAADTARWRERLHRGAAVYPVEVDGQLFDLMKRFGELEDSK
Ga0126381_1033853482	3300010376	Tropical Forest Soil	MPEKTAAFRQRRADDTRRWRERLQRGAAVYPVEVDSTTFDLMERFGGQRHGQQQRRARS*
Ga0126381_1045496851	3300010376	Tropical Forest Soil	MAKVEKTAAFRQRRAADTARWRERLHRGAAVLNAA
Ga0126383_107314362	3300010398	Tropical Forest Soil	MVEKTAAFRQRRAADTARCRERLERGAAVYPVEVDGTTFE*
Ga0124844_10309191	3300010868	Tropical Forest Soil	VVEKTATFRQRRAADTARWRERLANGCACYIVEVDGTTFDLMERFGGLKDSKTGDRRAVA
Ga0124844_10404383	3300010868	Tropical Forest Soil	VVEKTATFRQRRAADTARWRERLANGCACYIVEVDGTTFDLMERF
Ga0153922_10933072	3300012181	Attine Ant Fungus Gardens	MLVKKTAAFRQRRAADTARWRERLRQGRAVYPIEVD
Ga0137360_113913963	3300012361	Vadose Zone Soil	MVEKTAAFRQRRAADTARWRERLHRGSAVYPVEVDGQLFDSRERRV*
Ga0126369_124364951	3300012971	Tropical Forest Soil	MAEKTAAFRQRRAADTAPWRERLHRGAAVYPVEVDALTFDLVERRVGLRDSKTSDRQA
Ga0182036_100237393	3300016270	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGG
Ga0182036_111700592	3300016270	Soil	MVEKTAAFKQRRAADTARWRERLARGAAVYPVEVDGTTFDLMERFGGLKDSKTSD
Ga0182036_116440661	3300016270	Soil	MVEKTAAFRQRRADDTRRWRERLHRGAAVYPVEVDGTTFDLMERFGVIAIRAHIKN
Ga0182041_102013301	3300016294	Soil	MAKKTAAFRQRRAADTARWREWLHRGAAVYPVEVDGELFDLMERFGGVKFEVQ
Ga0182041_103491401	3300016294	Soil	MVEKTAAFRQRRAADTARWRERLARGAAVYPVEVDGTTFDLMERFGGLKDSKTSDRRA
Ga0182041_115556291	3300016294	Soil	MVEKTAAFRQRRAADTARWRERLANGRACYTIEVD
Ga0182041_117104411	3300016294	Soil	MVEKTAAFRQRRAAGTARWRERLQRGACVLPVEADAT
Ga0182041_117897551	3300016294	Soil	MVEKTAAFKQRRAADTARWRERLSRGAAVYPVEVDGTTFD
Ga0182033_105163011	3300016319	Soil	MVKKTAAFRQRRAADTARWRERLTRGAAVYPVEVDGTTFDLMERFGGLKDSK
Ga0182033_120533062	3300016319	Soil	LKQRRAADTARWRERLQRGAAVYPVEVDGPTFDLM
Ga0182035_100270111	3300016341	Soil	PGWTMVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGVKLEVQ
Ga0182035_106380351	3300016341	Soil	MTRSAASKQRRVADTQAWRARQKRGAVVLPVEANGELFDLLERF
Ga0182035_107988671	3300016341	Soil	MVEKTAAFRQRRAADTARWRERLQRGAAVYPVEVDGLTFDLME
Ga0182032_100087619	3300016357	Soil	MVEKTAAFRQRRAADTARWRERLARGAAVYPVEVDGTTFDLMERFGGLKDSKT
Ga0182032_106186652	3300016357	Soil	MAKKTAAFRQRRAADTARWRERLQRGAAVYPVEVDGTTFDLMERF
Ga0182034_101632803	3300016371	Soil	MAKKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGELFDLMERFGGVK
Ga0182034_116228682	3300016371	Soil	MAEKTAAFRQRRAADTARWRERLSRDAAVYPVEVDGTTFVPPSGAA
Ga0182034_116368741	3300016371	Soil	SARWRERLHRGAAVYPVEVDGELFDLMERFGDVKFEVQ
Ga0182040_102025553	3300016387	Soil	MVEKTAAFRQRRADDTRRWRERLHRGAAVYPVEVDGTTFDLMERF
Ga0182040_111576021	3300016387	Soil	MVEKTAAFKQRRAADTARWRERLARGAAVYPVDVDGTTFDLMERFGGLKDSKTS
Ga0182037_102025804	3300016404	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDEAPFQLMERFAGLTPV
Ga0182037_107032191	3300016404	Soil	MTRSAASKQRRVADTQAWRARQKRGAVVLPVEANGELFDLLERFGGVKFEVQQRPRTPPARR
Ga0182037_120198901	3300016404	Soil	MVEKTATRRQRRAADTARWRERLERGAALYPVEVDGTTFDLMERFAGLDPKKTDDRKAVAVALGKL
Ga0182039_118448181	3300016422	Soil	MVEKAAAFRQRRAADTARWRERLQRGAAVYPVEVDGTTFDLMERFGGLKDSKIGDR
Ga0182039_122737021	3300016422	Soil	MVEKTAARRQRRAADTARWRERLHRGAAVYPVEVDG
Ga0182038_103027561	3300016445	Soil	MVEKTAAFKQRRAADTARWHERLQRGAAVYPVEVDGTTFDLMERFGGLSDSKT
Ga0209622_10277831	3300027502	Forest Soil	MVEKTAAFRQRRAAATARWRERLQRGACVLPVEADATTFDLMDCSDGLEHYL
Ga0222749_104634292	3300029636	Soil	MGHARRETVAFRQRRAGDTASWRERVRCGRAVYPVEVDETTFDLMERFGGLKANK
Ga0318516_100844181	3300031543	Soil	MARSAAARKRRVADTQAWRARQKRGAAVYPVEVDGELFNLMERFGGCSSALN
Ga0318516_102745022	3300031543	Soil	MARSSAAKRRRVADTQAWRARQKRGAAVYPVEVDGELFDLMERFGGAKFEVQ
Ga0318541_102570211	3300031545	Soil	MVKKTGAFRQRRAADTARWRERLQRGATVYPVEVDGTTFEPPSGAA
Ga0318541_103735931	3300031545	Soil	MVEKTATSRQRRAADTARWRERLQRGAAVYPVEVDGTTFD
Ga0318541_107332641	3300031545	Soil	MVEKTAAFKQRRAADTARWHERLQRGAAVYPVEVDGTTF
Ga0318538_104951043	3300031546	Soil	MVEKTAAFRQRRAADTARWRERLARGAAVYPVEVDG
Ga0318538_106908791	3300031546	Soil	MVEKIAAVRQRRAADTARWRERLHRGAAVYPVEVDGELFDLM
Ga0318573_106039622	3300031564	Soil	MVEKTATSRQRRAADTARWRERLQRGAAVYPVEVDGTTFDLM
Ga0310915_100526453	3300031573	Soil	MVEKTAAFKQRRAADSARWRERLHRGAAVYPVEVDGELFDLMERFGDVKFEVQ
Ga0310915_108008571	3300031573	Soil	MVEKTAAFRQRRAADTARWRERLQRGACVLPVEADATTFDLMERFGGLKDSKTGDRQAVATALGK
Ga0318561_101276911	3300031679	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVD
Ga0318572_100823184	3300031681	Soil	MAEKTAAFRQRRAADTARWRERLRRGACVLPVEVDGTTFDLMERFGGLKDSKT
Ga0318560_105359671	3300031682	Soil	MVEKTAAFKQRRAADTARWHERLQRGAAVYPVEVDGTTFDLMERFGGLSDSK
Ga0318496_105630742	3300031713	Soil	MVEKTAAFKQRRAADTARWRERLQRGAAVYLVEVDGTTFDLM
Ga0306917_100203741	3300031719	Soil	MVEKTAAFKQRRAADSARWRERLHRGAAVYPVEVDGELFDLMERFGGVKFEVQ
Ga0306917_100977343	3300031719	Soil	MVEKTAAFRQRRAADTRRWRERLDRGAPVYPVEVDGQLFDLMERFGGLKDSKTGDRQAIATAP
Ga0306917_102405342	3300031719	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGVKLEVQ
Ga0306917_108771472	3300031719	Soil	MVEKTAARRQRRAADTARWRERLHRGAAVYPVEVE
Ga0306917_114738961	3300031719	Soil	MVKKTAAFRQRRAADTARWRERLTRGAAVYPVEVDGTTFDLMERFGGLKDSKTGDRQAVA
Ga0306918_104988601	3300031744	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGL
Ga0306918_110977973	3300031744	Soil	MAKKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGELFDLMERFGGVKFEVQ
Ga0306918_111369551	3300031744	Soil	RWAMVEKTAAFKQRRAAASARWRERLHRGAAVYPVEVDGTTFEPLSGAA
Ga0306918_113623482	3300031744	Soil	MVEKTAAFKQRRAADTARWRERLARGAAVYPVDVDGTTFDLMERF
Ga0318502_103405871	3300031747	Soil	MAEKTAAFRQRRAADTARWRERLHRGAAVYPVEIDGTTFDLMERFGGLKDSRI
Ga0318494_104116322	3300031751	Soil	GWTMVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGVKLEVQ
Ga0318546_105529981	3300031771	Soil	MPVEKTAAVRQRRAEDTRRWRERLHRGAAVYPVEVDGTTFDLMERFGGLKDSKTGDRQAVAAALG
Ga0318546_106340302	3300031771	Soil	MVEKTAAFKQRRAADTARWRERLSRGAAVYPVEVDGTTFDLMERFGGLKE
Ga0318550_105071641	3300031797	Soil	MVEKTTAFRQRRAADTARWRERLHRGAAVYPVEVG
Ga0318523_105056101	3300031798	Soil	MVKKTAAFRQRRAADTARWRERLERGAAVYPVEVDGMMFDLMERFGGPQGQQRG
Ga0318497_106351721	3300031805	Soil	VRSAAARRKQPVADTQAWRARQKRGAAVYPVEVDGTTFERFGGLETGK
Ga0318568_104061762	3300031819	Soil	MAKKTAAFRQRRAADTARWRERLQRGAAVYPVEVDGTTFEPPSGAA
Ga0318568_104184221	3300031819	Soil	MAEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGLTFDLME
Ga0310917_108654563	3300031833	Soil	MAKKTAAFRQRRAADTARWRERLQRGAAVYPVEVDGTTFEPPSGA
Ga0318517_104151861	3300031835	Soil	MAEKTAAFRQRRAADTARWRERLRRGACVLPVEADATTFDLMERFWRAQGQQDRATGALLPP
Ga0318511_102127782	3300031845	Soil	ADTQAWRARQKRGAAVYPVEVDGELFDLMERFGGAKFEVQ
Ga0318495_105037692	3300031860	Soil	MVEKTAAFRQRRAADTRRWRERLDRGAPVYPVEVDGQLFDLMERFGGLKDSKTGDRQAIA
Ga0306919_100142317	3300031879	Soil	FKQRRAADSARWRERLHRGAAVYPVEVDGELFDLMERFGGVKFEVQ
Ga0306925_102233971	3300031890	Soil	MAKKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGELFDLMERFGGVKFEV
Ga0306925_103894742	3300031890	Soil	MVEKTAAFRQRRAADTARWRERLERGAAVYPVEVDGTTFDLMERFGGLKDSKSGDRQGGHRRARAIVQPRD
Ga0306925_105701792	3300031890	Soil	MVEKTAAFKQRRAADTARWRERLSRGAAVYPVEVDGTTFDLMER
Ga0306925_115037091	3300031890	Soil	MAEKTATFRQRRAADTARWRERLHRGACVLPVEADATTFDLMERFGGLEAD
Ga0306925_118016161	3300031890	Soil	MRSAAARKRRVADTQAWRARQKRGAAVYPVEVDGELFNLMERFGGVKFEVQYRS
Ga0306925_120190371	3300031890	Soil	MVEKTAAFRERRAADTARWRERRANGRACYTVEVDGTT
Ga0306925_121711771	3300031890	Soil	MVEKTAAFRQRRAADTARWRERLANGRACYTIEVDGSTFDLLEQLG
Ga0318520_100581895	3300031897	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLM
Ga0306923_112101463	3300031910	Soil	MVEKTAALKQRRAADTARWRERLQRGAAVYPVEVDGPTFDLMERFGGLYDSKTSDRQ
Ga0306923_115010282	3300031910	Soil	MVKKTVTFRQRRTADTARWRERLSRDAAVYPVEVDGTTFVPPSGAA
Ga0306923_121205922	3300031910	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEIDATTFDLMERHP
Ga0306921_115738951	3300031912	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGLTFDLMERFAGLKASK
Ga0306921_115989481	3300031912	Soil	MVEKTAAFRQRRAADTARWRERLERGAAVYPVEVDGMMFDLMERFGG
Ga0306921_123457392	3300031912	Soil	MVEKTAAFKQRRAADSARWRERLHRGAAVYPVEVDGELFDLM
Ga0310912_113085242	3300031941	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFVG
Ga0310916_101060535	3300031942	Soil	MPRSAAFRRRRVADTQAWRARQKRGAAVYPGEVDGTTFDLLERFGGRDWQGG
Ga0310916_101342961	3300031942	Soil	MVEKTAAFKQRRAADTARWHERLQRGAAVYPVEVDGTTFDLMER
Ga0310916_102245113	3300031942	Soil	MVEKTAAFRQRRADDTRRWRERLHRGAAVYPVEVDGTTFDLMERFGVIAIRAH
Ga0310916_103118663	3300031942	Soil	IELRQQRRPGYAMVKKTGAFRQRRAADTARWRERLQRGATVYPVEVDGTTFEPPSGAA
Ga0310916_114806611	3300031942	Soil	MVEKTAAFKQRRAADTARWRERLHRGAAVYPVEIDGTTFDLMERFGGLKDSRIGDRKAVA
Ga0310916_116550021	3300031942	Soil	MVEKTAAFKQRRAADTARWRERLARGAAVYPVEVDGTTFDLMERFGGLKDSKTSDR
Ga0310913_110556821	3300031945	Soil	MVEKNAAFRQRRAADTRRWRERLHRGAAVYPVEVDGTTFEPPSGAA
Ga0310910_114182672	3300031946	Soil	MVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTRGLGFSLGH
Ga0310909_102279571	3300031947	Soil	MAKKTAAFKQRRAADTARWRERLQRGAAVYPVEVDGQLFDLMERFGGLR
Ga0310909_115700962	3300031947	Soil	MVEKTAALRQRRAADTARWRERLQRGAAVYPVDVDGTTFDLMERFGGLEASK
Ga0306926_100422411	3300031954	Soil	MVEKTAAFRQRRAADTARWRERLARGAAVYPVEVDGTTFDLMERFGGLKDSKTSDRRAV
Ga0306926_115574351	3300031954	Soil	TAAFRQRRAADTARWRERLQRGAAVYPVEVDGTTFEPPSGAA
Ga0306926_121483151	3300031954	Soil	MVEKTAAFRQRRAADTARWRERLERGAAVYPVEVDGMMFDLMERFGGPQGQQRG
Ga0306926_124922712	3300031954	Soil	MVEKTAAFKQRRAADTARWRERLARGAAVYPVEVDGTTFDLMERFGGLKDSKTSDRRAV
Ga0306926_130110591	3300031954	Soil	MVEKTAAFRQRRAADTRRWRERLSRGAAVYPVEVDGELFDLMERFGGVKFEVQ
Ga0318531_101957492	3300031981	Soil	MVEKTAAFKQRRAADTARWRERLQRGAAVYLVEVDGTTFD
Ga0310911_105676301	3300032035	Soil	MVEKTAAFKQRRAADTARWHERLQRGAAVYPVEVDGTTFDL
Ga0318558_100602392	3300032044	Soil	MVEKTAAFRQRRAADTRRWRERLDRGAPVYPVEVDGQLFDLMERVGGLKD
Ga0318558_103917221	3300032044	Soil	MVEKTATRRQRRAADTARWRERLERGAALYPVEVDGTTFDL
Ga0318532_100191655	3300032051	Soil	MVEKTAAFRQRRAADTARWRERLARGAAVYPVEVDGTTFDLMERFGGL
Ga0318532_103763681	3300032051	Soil	MAEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGLTFD
Ga0318570_101240933	3300032054	Soil	MVEKTAAFRQRRAADTARWRERLARGAAVYPVEVDGTTFDLM
Ga0318570_101993122	3300032054	Soil	MVEKTAAFKQRRAADTARWRERLQRGAAVYPVEVDGTTFDLMERFCGLKD
Ga0318533_108556601	3300032059	Soil	MVEKTAAFRQRRAADTARWRERLERGAAVYPVEVDGMMFDLMERFGGPQGQQ
Ga0318533_110005871	3300032059	Soil	MAKKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGQLFDLMERFGELKDSKTGDRQAVANAV
Ga0318533_111070002	3300032059	Soil	MVEKTAAFKQRRAAASARWRERLHRGAAVYPVEVDGTTFEPLSGAA
Ga0306924_105052133	3300032076	Soil	MPRSAAFRHRRVADTQAWRARQRRGAAVYPVEVDGRIFDLMARFGGLEADKVDDKR
Ga0306924_126145062	3300032076	Soil	MAEKTAAFRQRRAADTQRWRERLSRGAAVYPVELDGTTFALMERFGGLKESK
Ga0318525_102990151	3300032089	Soil	MAKVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERLGGLSSDK
Ga0318577_100284471	3300032091	Soil	MARSAAARKRRVADTQAWRARQKRGAAVYPVEVDGELFNLMERFGGCSSALNSYFG
Ga0318577_100977722	3300032091	Soil	VADTQAWRARQKRGAAVYPVEVDGELFDLMERFGGAKFEVQ
Ga0318577_105855882	3300032091	Soil	MDMVEKTAAFRQRRAADTARWRERLHRGAAVYPVEVDGTTFDLMERFGGLKAG
Ga0318540_103633092	3300032094	Soil	MVEKTAAFKQRRAADTARWRERLQRGAAVYPVEVDGTTFDLMERFC
Ga0318540_106118642	3300032094	Soil	MVRSAAARQQRAEATRRWRQRLDRGAAVYPIEVDGELFDLMERFGGVKFEVQ
Ga0306920_1018262733	3300032261	Soil	MRSAAARKRRVADTQAWRARQKRGAAVYPVEVDGELFNLMERFGG
Ga0306920_1039603552	3300032261	Soil	MDKSAVVRRQRAEATRRWRQRLDRGAAVYPVEVDGETFALMERLAARPSAG
Ga0310914_102357511	3300033289	Soil	RRRRASDTARWWARLRRGAAVYPVEVDETTFQLMERFAGLTPV
Ga0310914_108714991	3300033289	Soil	MVEKTAAFRQRRAANTRRWRERLSRGAAVYPVEVDGELFDLMERFGGVKFEVQ
Ga0310914_113701981	3300033289	Soil	MVEKTAAFRQRRAADTARWRERLANGRACYTIEVDGSTFDL
Ga0310914_114956242	3300033289	Soil	MVEKTAAFKQRRAADTARWRERLARGAAVYPVEVDGTTFDLMERFGGLKDSKTSDRRA
Ga0310914_117398201	3300033289	Soil	MVEKTAAFRQRRAADTARWRERLQRGAAVYPVEVDGMMFDLMERFGGPQGQQRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040749

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences