NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F040612

Metagenome / Metatranscriptome Family F040612

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F040612
Family Type Metagenome / Metatranscriptome
Number of Sequences 161
Average Sequence Length 39 residues
Representative Sequence MRTLGYITAVTMAAAAAALGLLAVMSLPDIRQYLKIRKM
Number of Associated Samples 105
Number of Associated Scaffolds 161

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.19 %
% of genes near scaffold ends (potentially truncated) 12.42 %
% of genes from short scaffolds (< 2000 bps) 82.61 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (55.901 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.012 % of family members)
Environment Ontology (ENVO) Unclassified
(20.497 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.217 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 55.22%    β-sheet: 0.00%    Coil/Unstructured: 44.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 161 Family Scaffolds
PF05532CsbD 10.56
PF01740STAS 9.94
PF12697Abhydrolase_6 4.35
PF01145Band_7 3.11
PF12802MarR_2 2.48
PF02909TetR_C_1 1.86
PF13466STAS_2 1.86
PF01183Glyco_hydro_25 1.86
PF03631Virul_fac_BrkB 1.86
PF00171Aldedh 1.86
PF00571CBS 1.24
PF03861ANTAR 1.24
PF00144Beta-lactamase 1.24
PF03734YkuD 0.62
PF01458SUFBD 0.62
PF13378MR_MLE_C 0.62
PF02687FtsX 0.62
PF02452PemK_toxin 0.62
PF01904DUF72 0.62
PF01027Bax1-I 0.62
PF03992ABM 0.62
PF00665rve 0.62
PF00011HSP20 0.62
PF13305TetR_C_33 0.62
PF14659Phage_int_SAM_3 0.62
PF00440TetR_N 0.62
PF08281Sigma70_r4_2 0.62
PF00196GerE 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 161 Family Scaffolds
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 10.56
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 1.86
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 1.86
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 1.86
COG1309DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmATranscription [K] 1.86
COG3757Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 familyCell wall/membrane/envelope biogenesis [M] 1.86
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 1.86
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 1.24
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.24
COG3707Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domainsTranscription [K] 1.24
COG2367Beta-lactamase class ADefense mechanisms [V] 1.24
COG2337mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin moduleDefense mechanisms [V] 0.62
COG4584TransposaseMobilome: prophages, transposons [X] 0.62
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.62
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.62
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.62
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.62
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 0.62
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.62
COG0719Fe-S cluster assembly scaffold protein SufBPosttranslational modification, protein turnover, chaperones [O] 0.62
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.62


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.90 %
UnclassifiedrootN/A44.10 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10006223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia10251Open in IMG/M
3300002677|Ga0005475J37263_109177Not Available506Open in IMG/M
3300003505|JGIcombinedJ51221_10333582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia617Open in IMG/M
3300004092|Ga0062389_101778119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria796Open in IMG/M
3300004099|Ga0058900_1335714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia570Open in IMG/M
3300004115|Ga0058890_170437All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300004152|Ga0062386_100037771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3610Open in IMG/M
3300005434|Ga0070709_10040266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae2872Open in IMG/M
3300005434|Ga0070709_10230755Not Available1324Open in IMG/M
3300005434|Ga0070709_10282668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1206Open in IMG/M
3300005436|Ga0070713_100706525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces963Open in IMG/M
3300005436|Ga0070713_101005531Not Available804Open in IMG/M
3300005437|Ga0070710_10445688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales876Open in IMG/M
3300005439|Ga0070711_100165665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1680Open in IMG/M
3300005439|Ga0070711_100484351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1017Open in IMG/M
3300005439|Ga0070711_101659837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia559Open in IMG/M
3300005467|Ga0070706_100774745All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300005471|Ga0070698_100184216All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium2026Open in IMG/M
3300005529|Ga0070741_10119815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2723Open in IMG/M
3300005529|Ga0070741_10140443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2449Open in IMG/M
3300005534|Ga0070735_10673479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales612Open in IMG/M
3300005538|Ga0070731_10328464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1016Open in IMG/M
3300005541|Ga0070733_11100065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces griseolus533Open in IMG/M
3300005547|Ga0070693_101227343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia577Open in IMG/M
3300005561|Ga0066699_10655435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces752Open in IMG/M
3300005591|Ga0070761_10092525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1735Open in IMG/M
3300005591|Ga0070761_10279439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1002Open in IMG/M
3300005602|Ga0070762_10028098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2987Open in IMG/M
3300005602|Ga0070762_10072073All Organisms → cellular organisms → Bacteria1947Open in IMG/M
3300005610|Ga0070763_10006418All Organisms → cellular organisms → Bacteria4620Open in IMG/M
3300005610|Ga0070763_10018138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia3059Open in IMG/M
3300005610|Ga0070763_10547776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales666Open in IMG/M
3300006032|Ga0066696_10220876Not Available1216Open in IMG/M
3300006046|Ga0066652_101161415Not Available731Open in IMG/M
3300006574|Ga0074056_11761312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces griseolus531Open in IMG/M
3300006806|Ga0079220_11468999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria583Open in IMG/M
3300006871|Ga0075434_101410459Not Available706Open in IMG/M
3300006893|Ga0073928_10022931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6317Open in IMG/M
3300006893|Ga0073928_10111842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2268Open in IMG/M
3300006893|Ga0073928_10155923Not Available1836Open in IMG/M
3300006893|Ga0073928_10168112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium1751Open in IMG/M
3300006893|Ga0073928_10511506Not Available859Open in IMG/M
3300006954|Ga0079219_11406454Not Available624Open in IMG/M
3300006954|Ga0079219_11769542Not Available576Open in IMG/M
3300010303|Ga0134082_10174142Not Available875Open in IMG/M
3300010371|Ga0134125_10530842Not Available1302Open in IMG/M
3300010371|Ga0134125_10601995All Organisms → cellular organisms → Bacteria → Terrabacteria group1215Open in IMG/M
3300010373|Ga0134128_10925312Not Available965Open in IMG/M
3300010396|Ga0134126_11225357Not Available833Open in IMG/M
3300010400|Ga0134122_12323602Not Available582Open in IMG/M
3300010866|Ga0126344_1385459Not Available730Open in IMG/M
3300011107|Ga0151490_1162743Not Available765Open in IMG/M
3300011120|Ga0150983_10422294Not Available1101Open in IMG/M
3300011120|Ga0150983_10916384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea diastatica509Open in IMG/M
3300011120|Ga0150983_11184274Not Available709Open in IMG/M
3300011120|Ga0150983_11736647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1399Open in IMG/M
3300011120|Ga0150983_11922627Not Available532Open in IMG/M
3300011120|Ga0150983_12941865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium2129Open in IMG/M
3300011120|Ga0150983_15560680Not Available591Open in IMG/M
3300011120|Ga0150983_15760538Not Available914Open in IMG/M
3300011120|Ga0150983_16596571Not Available606Open in IMG/M
3300012211|Ga0137377_10002339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia14071Open in IMG/M
3300012285|Ga0137370_10751812Not Available605Open in IMG/M
3300012957|Ga0164303_10843412Not Available635Open in IMG/M
3300012984|Ga0164309_10596917Not Available861Open in IMG/M
3300012987|Ga0164307_11464369Not Available577Open in IMG/M
3300012988|Ga0164306_11814085Not Available530Open in IMG/M
3300012989|Ga0164305_11078718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp. HDW14688Open in IMG/M
3300015374|Ga0132255_105643588Not Available529Open in IMG/M
3300018431|Ga0066655_10730313Not Available671Open in IMG/M
3300018468|Ga0066662_10790402Not Available919Open in IMG/M
3300019159|Ga0184574_106387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae888Open in IMG/M
3300019182|Ga0184598_119875Not Available732Open in IMG/M
3300019192|Ga0184603_131407Not Available502Open in IMG/M
3300019192|Ga0184603_142475All Organisms → cellular organisms → Bacteria → Terrabacteria group613Open in IMG/M
3300020581|Ga0210399_10110923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2249Open in IMG/M
3300020581|Ga0210399_10291277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1363Open in IMG/M
3300020582|Ga0210395_10003493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria12035Open in IMG/M
3300020582|Ga0210395_10082865All Organisms → cellular organisms → Bacteria2364Open in IMG/M
3300020582|Ga0210395_10384102All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300020582|Ga0210395_10515872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea rubra899Open in IMG/M
3300021171|Ga0210405_10365501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1138Open in IMG/M
3300021171|Ga0210405_10602202Not Available856Open in IMG/M
3300021171|Ga0210405_10781718Not Available733Open in IMG/M
3300021181|Ga0210388_10170600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1897Open in IMG/M
3300021181|Ga0210388_10469776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1105Open in IMG/M
3300021401|Ga0210393_10236454All Organisms → cellular organisms → Bacteria1481Open in IMG/M
3300021401|Ga0210393_10242615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales1461Open in IMG/M
3300021401|Ga0210393_11441386Not Available549Open in IMG/M
3300021402|Ga0210385_10070329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2383Open in IMG/M
3300021402|Ga0210385_10132300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1770Open in IMG/M
3300021402|Ga0210385_10244729All Organisms → cellular organisms → Bacteria → Terrabacteria group1316Open in IMG/M
3300021402|Ga0210385_10247330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1309Open in IMG/M
3300021403|Ga0210397_10166295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1554Open in IMG/M
3300021403|Ga0210397_10326397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1133Open in IMG/M
3300021433|Ga0210391_10520721All Organisms → cellular organisms → Bacteria → Terrabacteria group934Open in IMG/M
3300021474|Ga0210390_10202606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1678Open in IMG/M
3300021474|Ga0210390_10512028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1010Open in IMG/M
3300021474|Ga0210390_10570682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia950Open in IMG/M
3300021474|Ga0210390_10686295Not Available854Open in IMG/M
3300021474|Ga0210390_11064023Not Available658Open in IMG/M
3300021478|Ga0210402_10106692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2521Open in IMG/M
3300021559|Ga0210409_11247633Not Available619Open in IMG/M
3300022557|Ga0212123_10052399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3718Open in IMG/M
3300022557|Ga0212123_10770261Not Available583Open in IMG/M
3300023019|Ga0224560_112955Not Available522Open in IMG/M
3300023541|Ga0247544_101730Not Available584Open in IMG/M
3300023660|Ga0247550_102108Not Available668Open in IMG/M
3300025898|Ga0207692_10198728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1178Open in IMG/M
3300025898|Ga0207692_11156000Not Available513Open in IMG/M
3300025906|Ga0207699_10090443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1920Open in IMG/M
3300025910|Ga0207684_10398790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1183Open in IMG/M
3300025912|Ga0207707_10848001Not Available758Open in IMG/M
3300025915|Ga0207693_11135858Not Available592Open in IMG/M
3300025916|Ga0207663_10150900Not Available1630Open in IMG/M
3300025928|Ga0207700_10447814Not Available1138Open in IMG/M
3300025928|Ga0207700_11109489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia707Open in IMG/M
3300025929|Ga0207664_11938357Not Available512Open in IMG/M
3300027619|Ga0209330_1007759All Organisms → cellular organisms → Bacteria → Terrabacteria group2398Open in IMG/M
3300027648|Ga0209420_1014716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2651Open in IMG/M
3300027725|Ga0209178_1432450Not Available504Open in IMG/M
3300027853|Ga0209274_10023937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2796Open in IMG/M
3300027855|Ga0209693_10000774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria13166Open in IMG/M
3300027855|Ga0209693_10099255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1441Open in IMG/M
3300027884|Ga0209275_10221754All Organisms → cellular organisms → Bacteria → Terrabacteria group1029Open in IMG/M
3300027889|Ga0209380_10324083Not Available905Open in IMG/M
3300027894|Ga0209068_10585833All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300027908|Ga0209006_10214562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1667Open in IMG/M
3300027986|Ga0209168_10451799All Organisms → cellular organisms → Bacteria → Terrabacteria group623Open in IMG/M
3300028884|Ga0307308_10610622Not Available523Open in IMG/M
3300029999|Ga0311339_10159265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2634Open in IMG/M
3300030760|Ga0265762_1036918Not Available945Open in IMG/M
3300030762|Ga0265775_112759Not Available546Open in IMG/M
3300030803|Ga0074037_1469032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300030805|Ga0265756_103463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria856Open in IMG/M
3300030877|Ga0265777_103744Not Available946Open in IMG/M
3300030877|Ga0265777_108201Not Available739Open in IMG/M
3300030884|Ga0265758_101274Not Available980Open in IMG/M
3300031236|Ga0302324_100773037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha pittospori1342Open in IMG/M
3300031236|Ga0302324_103391682Not Available519Open in IMG/M
3300031708|Ga0310686_115348980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia861Open in IMG/M
3300031718|Ga0307474_10061250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2785Open in IMG/M
3300031720|Ga0307469_11038340Not Available767Open in IMG/M
3300031808|Ga0316037_101817Not Available1165Open in IMG/M
3300031874|Ga0316047_102334Not Available909Open in IMG/M
3300032120|Ga0316053_107060Not Available741Open in IMG/M
3300032205|Ga0307472_100817198Not Available853Open in IMG/M
3300032515|Ga0348332_10088428All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300032515|Ga0348332_10126298All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300032515|Ga0348332_11038220Not Available840Open in IMG/M
3300032515|Ga0348332_12098356Not Available603Open in IMG/M
3300032515|Ga0348332_14579602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria950Open in IMG/M
3300032739|Ga0315741_10200071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1323Open in IMG/M
3300032739|Ga0315741_12034036Not Available502Open in IMG/M
3300032892|Ga0335081_11562994Not Available727Open in IMG/M
3300032896|Ga0335075_10388624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1492Open in IMG/M
3300032896|Ga0335075_11466996Not Available570Open in IMG/M
3300032898|Ga0335072_10007504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia15867Open in IMG/M
3300033551|Ga0247830_11697829Not Available506Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.29%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.42%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil7.45%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring5.59%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.73%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.11%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter3.11%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.48%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.86%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.86%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.86%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.24%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.24%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.24%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.24%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.62%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.62%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.62%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.62%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.62%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002677Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF124 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004099Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004115Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF216 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019159Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019182Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019192Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300023019Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1EnvironmentalOpen in IMG/M
3300023541Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023660Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027619Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030762Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030803Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030805Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030877Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030884Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031808Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE3 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031874Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLE5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032120Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032739Forest Soil Metatranscriptomics Site 2 LB Combined AssemblyEnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1000622323300001593Forest SoilMRALGYISAITMATTAAALGLLAVRSLPDIRQYLKIRKM*
Ga0005475J37263_10917723300002677Forest SoilMRALGYITAVTIAAASAALALLVVMSVPDVRRYLKIRKM*
JGIcombinedJ51221_1033358213300003505Forest SoilMRTLGYITAVTMAATAAALGLLAVKSVPDLRQYLKIRKM*
Ga0062389_10177811913300004092Bog Forest SoilMRILGYITAITMAAAASALGLLAVRSAPDVRQYLKIRKM*
Ga0058900_133571423300004099Forest SoilMRTLGYITAVTMATAATALGLLAAMSVPDMRRYMKIRKM*
Ga0058890_17043723300004115Forest SoilMRTLGYITAGTMAAAAAALGLLAAMSLPDMRKYLKIRKM*
Ga0062386_10003777113300004152Bog Forest SoilMRTMGYVTTVTMAAAAAALGLVAVKSLPDARRYLTMRKM*
Ga0070709_1004026623300005434Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTMAAAAAALGLLAVRSLPDMRQYLKIRKM*
Ga0070709_1023075533300005434Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTMAATAAALGLLAVMSLPDIRQYRKIRKM*
Ga0070709_1028266823300005434Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTMAAAAAALGLLAVMSLPDIRQYLKIRKM*
Ga0070713_10070652523300005436Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTTAAAAAALGLLAAKSVPDIRRYLKIRKM*
Ga0070713_10100553123300005436Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITALTMAATAAALGLLAVMSLPDIRQYLKIRKM*
Ga0070710_1044568823300005437Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTMAAAAVALGLLAVMSLPDIRQYLKIRKM*
Ga0070711_10016566533300005439Corn, Switchgrass And Miscanthus RhizosphereMRTLGNITAVTMAVAVAALGLLAVRSVPDVRRYLKIRKM*
Ga0070711_10048435123300005439Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTMAATAAALGLLVVMSLPDIRQYLKIRKM*
Ga0070711_10165983723300005439Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTMAVAAVALGLLAVTSLPDIRQYLKIRKM*
Ga0070706_10077474533300005467Corn, Switchgrass And Miscanthus RhizosphereMRALGYTTAVTTAAASAALALLVVMSVPDARRYLKIRKM*
Ga0070698_10018421623300005471Corn, Switchgrass And Miscanthus RhizosphereMRALGYTPAVTTAAASAALALLVVMSVPDARRYLKIRKM*
Ga0070741_1011981523300005529Surface SoilMRVLGYITAVIAAATAAALGLLAVKSLPDVRQYLKIRKM*
Ga0070741_1014044323300005529Surface SoilMRTLGHITAVTMAAAAAALGLLAVASLPDMRQYLKIRKM*
Ga0070735_1067347923300005534Surface SoilMRTLGYITAVTMTASAAALGLLAVMSLPDIRRYLKIRRM*
Ga0070731_1032846423300005538Surface SoilMRALGYLAAITMAAAAAALGVLAVKSVPDVRRYIAIRQM*
Ga0070733_1110006513300005541Surface SoilMRTLGYITAVTMAAAVAALGLLAAKSAPDIRRYLKIKKM*
Ga0070693_10122734313300005547Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTMAAAAVALGLLAVTSLPDIRQYLKIRKM*
Ga0066699_1065543533300005561SoilMRALGYITAVTIAAAGAALALLVVMSLPDVRRYLKIKKM*
Ga0070761_1009252523300005591SoilMRRLGYVTTIIMAAAAAALGLLAVKSLPDARRYLTVRKM*
Ga0070761_1027943933300005591SoilMRTLGYITAITMAAAAASLGLLAVMSLPDLRKYLKIRKM*
Ga0070762_1002809883300005602SoilMRTLGYISAVTMAAAAATLGLLAVMSLPDMRRYLKIRKM*
Ga0070762_1007207333300005602SoilMRTVGYITAVTMAVTAAAIGLLAVMSLPDMRRYMKIRKM*
Ga0070763_1000641823300005610SoilMRTLGYISAITMAASAAALGLLAVMSLPDIRQYLKIRKM*
Ga0070763_1001813843300005610SoilMRTPGYITAVTMAAAAAALGLLTVTSLPDIRRYLKIKKM*
Ga0070763_1054777623300005610SoilMRTLGYITVVTMAAAAAAFGLLAVMSLPDLRRYLKIRKM*
Ga0066696_1022087623300006032SoilMRALGYITGVTIAAASAALALLVVLSLPDVRRYIKIRKM*
Ga0066652_10116141513300006046SoilMRALGYITGITIAAASAALALLVVLSLPDVRRYIKIRKM*
Ga0074056_1176131213300006574SoilMRTLGYTTAVTTAAAAAALGLLAVMSLPDIRQYLKIRKM*
Ga0079220_1146899913300006806Agricultural SoilLGYITAVTMAAAAAALGLLAAMSVPDIRRYLKIRKM*
Ga0075434_10141045913300006871Populus RhizosphereMRTLGYITAVTITAAAAALGLLAVMSLPDIRQYLKIRKM*
Ga0073928_1002293163300006893Iron-Sulfur Acid SpringMRTLGYITAVTLTAAVAALGVLAVMAVPDARRYLKIKKM*
Ga0073928_1011184253300006893Iron-Sulfur Acid SpringMRTLGYITTIILAAAAAALGLAAVKSLPDVRRYLTVKKM*
Ga0073928_1015592343300006893Iron-Sulfur Acid SpringMRTLGYITTITLVAAAAALGLVAVKSLPDVRRYLTVRKM*
Ga0073928_1016811213300006893Iron-Sulfur Acid SpringMRTLGYISAVVLTAASAGLGVLVVMSLPDARRYLKIRKM*
Ga0073928_1051150623300006893Iron-Sulfur Acid SpringMRILGYVTAVTMAAASAALGLLAVMSLPDVRRYLKIRNM*
Ga0073928_1061649513300006893Iron-Sulfur Acid SpringMRTFGYISAVVLTAASAGLGVLVVMGIPDLRRYLKFRKM*
Ga0079219_1140645413300006954Agricultural SoilMRTLGYITAVTMAAAAAALGLLAAMSVPDMRRYLKIKKM*
Ga0079219_1176954213300006954Agricultural SoilMRTLGYITAITMAATAAALGLLAVMSLPDIRQYLKIRKM*
Ga0134082_1017414213300010303Grasslands SoilMRALGYITGVTIAAASAALALLVVLSPPDVRRYIKIRKM*
Ga0134125_1053084223300010371Terrestrial SoilMRTLGYITAVTMAATAAALGLLAVMSLPDIRQYLKIRKM*
Ga0134125_1060199513300010371Terrestrial SoilRRHAMRTLGYITAVTMAAAAAALGLLAVRSLPDMRQYLKIRKM*
Ga0134128_1092531213300010373Terrestrial SoilMRTLGYITAVTMAAAAAALGLLAVMSLPDVRQYLKIRKM*
Ga0134126_1122535713300010396Terrestrial SoilNRRHTMRTLGYITAVTMAATAAALGLLAVMSLPDIRQYLKIRKM*
Ga0134122_1232360213300010400Terrestrial SoilMRTLGYITAVTMAAAAAALGLLAVMSLPDIRQYRKIRKM*
Ga0126344_138545913300010866Boreal Forest SoilMRTLGYIAAVTMATAATALGLLAAMSVPDMRRYMKIRKM*
Ga0151490_116274313300011107SoilMRTLGYTTAVTMAAAAAALGLLAVMSLPDIRQYLKIRKM*
Ga0150983_1042229423300011120Forest SoilMRTLGYITAVTMAAAAAGLGLLAVMSLPDIRQYLKIRKM*
Ga0150983_1091638423300011120Forest SoilMRTLGYITAVTTAAAVAALGLLTVLSLPDIRRYLRIKKM*
Ga0150983_1118427413300011120Forest SoilMRTLGYITAVTMTAAAAALGLLAARSVPDIRRFLKIKKM*
Ga0150983_1173664713300011120Forest SoilMRTLGYITTITMAAAAAALGLAAVKSLPDMRRYLTMRKI*
Ga0150983_1192262713300011120Forest SoilMRTLGYITAITMAVAAASLGLLAVMSLPDLRKYLKIRKM*
Ga0150983_1294186523300011120Forest SoilMMRTLGYVTTIILAAAAAALGLLAVKSLPDVRRYLKWRKM*
Ga0150983_1556068013300011120Forest SoilMRALGYITAVTIAAAGAALALLVVMSVPDVRRYLKIRKM*
Ga0150983_1576053833300011120Forest SoilMRTLGYITAVTLTAAATTLGVLAVMSVPDMRRYLKIKKM*
Ga0150983_1659657123300011120Forest SoilMRTLGYISAATLAAGSVAVGLIAIMSWPDMQRYLKIRKM*
Ga0137377_1000233923300012211Vadose Zone SoilMRALGYITAITIAAASAALALLVVMSVPDVRRYL*
Ga0137370_1075181213300012285Vadose Zone SoilMRALGYITVVTIAAASAALALLVVLSVPDVRRYMKIRKM*
Ga0164303_1084341223300012957SoilMRTLGYITAVTTAAAAAALGLLAAMSVPDMRRYLKIRKM*
Ga0164309_1059691723300012984SoilMRALGYITAVTTAAAAAALGLLAAMSVPDMRRYLKIRKM*
Ga0164307_1146436923300012987SoilMRTLGYITAVTMAATVAALGLLAVMSLPDIRQYLKIRKM*
Ga0164306_1181408513300012988SoilMRTLGYITAVTMAATVAALGLLAVMSLPDIRQFLKIRKM*
Ga0164305_1107871813300012989SoilMRTLGYITAVTMAATAAALGLLAVMSLPDIRQFLKIRKM*
Ga0132255_10564358813300015374Arabidopsis RhizosphereMRTLGYITAVTMAATATALGLLAVMSLPDIRQYLKIRKM*
Ga0066655_1073031333300018431Grasslands SoilMRALGYITGVTIAAASAALALLVVLSLPDVRRYIKIRKM
Ga0066662_1079040223300018468Grasslands SoilMRALGYITAVTIAAASAALALLVVLSLPDVRRYIKIRKM
Ga0184574_10638713300019159SoilMRTLGHITAITMAAAAAALGLLAVKSLPDIRQYLKIRKM
Ga0184598_11987533300019182SoilMRTLGYITAVTMAAATAALGLLAVMSLPDIRQYLKIRKM
Ga0184603_13140713300019192SoilMRTLGYITAITMTAAAAGLGFLAVMSLPDIRQYLKIRKM
Ga0184603_14247513300019192SoilMMRTIGYVTTVTMAATAAALGLVAVKSLPDVRRYLTMRKI
Ga0210399_1011092333300020581SoilMRTLGYTTAVTMAAAAAALGLLAVMSLPDLRRYLKIRKM
Ga0210399_1029127723300020581SoilMRTLGYITAVTMAAAAAGLGLLAVMSLPDIRQYLKIRKM
Ga0210395_1000349333300020582SoilMRRLGYVTTIIMAAAAAALGLLAVKSLPDARRYLTVRKM
Ga0210395_1008286533300020582SoilMRTLGYISAITMAAAAAALGLLAVMALPDMRRYLKIRKM
Ga0210395_1038410213300020582SoilMRTLGYITAVTMTAAAAALGLLAARSVPDIRRFLKIKKM
Ga0210395_1051587213300020582SoilMRTLGYITAVTLTAAVAALGVLAVMAVPDARRYLKIKKM
Ga0210405_1036550133300021171SoilMRTLGYITAVTMATAATALGLLAAMSVPDMRRYMK
Ga0210405_1060220223300021171SoilMRTLGYITAVTLTAAAATLGVLVVMSVPDARRYLKIKKM
Ga0210405_1078171833300021171SoilMRALGYITAVTIAAASAALALLVVMSVPDVQRYLKIRKM
Ga0210388_1017060023300021181SoilMRALGYITAVAVAIAAAALGLLVIMSLPDIRQYLKIRKM
Ga0210388_1046977633300021181SoilMRTLGYITAVTMAATAAALGLLAVKSVPDLRQYLKIRKM
Ga0210393_1023645433300021401SoilMRTLGYITAVTMAAAATALGLLAAMSVPDMRRYMKIRKM
Ga0210393_1024261533300021401SoilMRTLGYITAVTMATAATALGLLAAMSVPDMRRYMKIRKM
Ga0210393_1144138623300021401SoilMRTLGYITAVTLTAAATTLGVLAVMSVPDMRRYLKIKKM
Ga0210385_1007032923300021402SoilMRTLGYLTAVTMAAAAAALGLLAVMSLPDMRKYLKIRKM
Ga0210385_1013230013300021402SoilMRTLGYATAVTMAAGAALGLLAVMSLPDIRHYLRIRKM
Ga0210385_1024472923300021402SoilMRTLGYITAVTMTATAAALGLLAVTSLPDIRRYLKIRKM
Ga0210385_1024733023300021402SoilMMRRLGYVTTIIMAAAAAALGLLAVKSLPDARRYLTVRKM
Ga0210397_1016629533300021403SoilMRTLGYITAVTMAAAATALGLLAAMAVPDMRRYMKIRKM
Ga0210397_1032639723300021403SoilMRGLGYITAVAITTAAAALGLLVIMSLPDIRQYLKIRKM
Ga0210391_1052072123300021433SoilMRTLGYISATTMAAAAAAFGLLAVMSLPDIRRYLKIRKM
Ga0210390_1020260633300021474SoilMRTLGYITAVTMAATAATLGLLAVKAVPDMRRYMKIRKM
Ga0210390_1051202813300021474SoilKDRRHAMRTLGYITAVTMAATAAALGLLAVKSVPDLRQYLKIRKM
Ga0210390_1057068223300021474SoilMRTLGYITAVTMAATATALGLLVVMSVPDMRRYLKIRKM
Ga0210390_1068629513300021474SoilMRTLGYITAVTMAAAAAALGLLAVMSLPDMRKYLKIRKM
Ga0210390_1106402323300021474SoilMRTLGYITAVTLTAAAATLGVLAVMAVPDMRRYLKIK
Ga0210402_1010669243300021478SoilMRALGYITAVTTAAAAAALGLLAAMSVPDMRRYLKIRKM
Ga0210409_1124763313300021559SoilMRTLGYITAATMATAATALGLLALMSLPDLRRYLKIRKM
Ga0212123_1005239953300022557Iron-Sulfur Acid SpringMRTLGYITTIILAAAAAALGLAAVKSLPDVRRYLTVKKM
Ga0212123_1077026113300022557Iron-Sulfur Acid SpringGYVTAVTMAAASAALGLLAVMSLPDVRRYLKIRNM
Ga0212123_1089645013300022557Iron-Sulfur Acid SpringMRTFGYISAVVLTAASAGLGVLVVMGIPDLRRYLKIRKM
Ga0224560_11295523300023019SoilNRRHAMRTLGHITAITMAAAAAALGLLAVKSLPDIRQYLKIRKM
Ga0247544_10173013300023541SoilPAMRTLGYITAVTLTAATATLGVLAVMSVPDVRRYLKIKKM
Ga0247550_10210813300023660SoilMRTLGYITTITMAAAAAALGLVAVKSLPDVRRYLTMRK
Ga0207692_1019872823300025898Corn, Switchgrass And Miscanthus RhizosphereMRTLGYISAVTMAATGAAFGVLAVKSVPDARRYLAMRKM
Ga0207692_1115600013300025898Corn, Switchgrass And Miscanthus RhizosphereMRTLGNITAVTMAVAAAALGLLAVRSVPDVRRYLKIRKM
Ga0207699_1009044313300025906Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTMAATAAALGLLAVMSLPDIRQYLKIR
Ga0207684_1039879023300025910Corn, Switchgrass And Miscanthus RhizosphereMRALGYTTAVTTAAASAALALLVVMSVPDARRYLKIRKM
Ga0207707_1084800123300025912Corn RhizosphereMRTLGYITAVTMAAAAVALGLLAVTSLPDIRQYRKIRKM
Ga0207693_1113585813300025915Corn, Switchgrass And Miscanthus RhizosphereRTLGYITAVTMAATAAALGLLAVMSLPDIRQYRKIRKM
Ga0207663_1015090023300025916Corn, Switchgrass And Miscanthus RhizosphereMRTLGNITAVTMAVAVAALGLLAVRSVPDVRRYLKIRKM
Ga0207700_1044781413300025928Corn, Switchgrass And Miscanthus RhizosphereMRTLGYITAVTTAAAAAALGLLAAKSVPDIRRYLKIRKM
Ga0207700_1110948913300025928Corn, Switchgrass And Miscanthus RhizosphereDRRHAMRTLGYITAVTMAAAAVALGLLAVTSLPDIRQYLKIRKM
Ga0207664_1193835723300025929Agricultural SoilMRTLGYITALTMAATAAALGLLAVMSLPDIRQYLKIRKM
Ga0209330_100775933300027619Forest SoilMRTLGYITAVTITAAAAALGLLAVTSLPDIRRFLKIKKM
Ga0209420_101471633300027648Forest SoilMRTLGYITAITMAAAAAGLGLLAVMSLPDIRQYLKIRKM
Ga0209178_143245013300027725Agricultural SoilMRTLGYITAVTMAATAAALGLLAAMSVPDMRRYLKIRKM
Ga0209274_1002393713300027853SoilMRTLGYITAITMAAAAASLGLLAVMSLPDLRKYLKIRKM
Ga0209693_1000077493300027855SoilMRTLGYISAVTMAAAAATLGLLAVMSLPDMRRYLKIRKM
Ga0209693_1009925523300027855SoilMRTPGYITAVTMAAAAAALGLLTVTSLPDIRRYLKIKKM
Ga0209275_1022175423300027884SoilMRTVGYITAVTMAVTAAAIGLLAVMSLPDMRRYMKIRKM
Ga0209380_1032408313300027889SoilMRTVGYITAVTMAVTAAAIGLLAVKSLPDLQRYMKI
Ga0209068_1058583323300027894WatershedsMRTLGYITTVTTAAAAAALGLLAAKSVPDIRRYLKIRKM
Ga0209006_1021456223300027908Forest SoilMRRLGHVAAITVAVAAVALGLLAVRSLPEIRRYLAIRKM
Ga0209168_1045179913300027986Surface SoilMRTLGYITAVTMTASAAALGLLAVMSLPDIRRYLKIRRM
Ga0307308_1061062213300028884SoilMRTLGYITAVTTAAAALGLLAAMSMPDVRRYLKIRKM
Ga0311339_1015926533300029999PalsaMRILGYITAITMAAAASALGLLAVRSAPDVRQYLKIRKM
Ga0265762_103691823300030760SoilMRTLGSITVITMAAAAAGLGLLAVMSLPDIRQYLKIRKM
Ga0265775_11275913300030762SoilMRTLGYITAVTLATASAALGLLVVMSLPDVRRYLKIRRM
Ga0074037_146903223300030803SoilMRTLGTITAVTMAAAAAALGLLAVMAVPDARRYLKIRRM
Ga0265756_10346323300030805SoilMRTLGYITAVTMATAATALGLLAAMSVPDLRRYMKIRKM
Ga0265777_10374423300030877SoilMRTLGYITAITMAAAAGLGLLAVMSLPDIRQYLKIRKM
Ga0265777_10820123300030877SoilMRTLGQITAVTLAVASAGLGLAMVMAWPDMQRYLKIRNM
Ga0265758_10127413300030884SoilMRTLGYITAITMAVTAATLGLLTAMSLPDIRRYLKIRKM
Ga0302324_10077303733300031236PalsaMMRTLGYITAVTMAAAGAAVGLLTVMSIPDVRRYLKIRNM
Ga0302324_10339168223300031236PalsaMRTFGYISAITMAAAASALGLLAVKSAPDVRRYLKIRKM
Ga0310686_11534898023300031708SoilMRILGYITAITMAAAAAALGLLAVRSAPDVRQYLKIMKM
Ga0307474_1006125033300031718Hardwood Forest SoilMRTLGYITAVTMAAAVAALGLLAVMSLPDIRKYLKIKKM
Ga0307469_1103834013300031720Hardwood Forest SoilMRTLGYITAVTMAAAAAALGLLAVMSLPDIRQYLKIRK
Ga0316037_10181723300031808SoilMRTLGQMTAVALAVTSAALGLLVVMSLPDLRRYLKIRKM
Ga0316047_10233423300031874SoilMRTLGQMTAVALAVTSAALGLLVVMSLPDLRRYLKIWKM
Ga0316053_10706013300032120SoilMRTLGYITAVTMTAAAAALGLLVARSVPDIRRYLKIKKM
Ga0307472_10081719823300032205Hardwood Forest SoilMRTLGYITAATMAAAAAALGLLAAMSVPDIRRYLKIRKM
Ga0348332_1008842823300032515Plant LitterMRTLGYITAVTMAAAVAALGLLAVMSVPDIRQYLKIRKM
Ga0348332_1012629813300032515Plant LitterMRTLGYITAVTMTAAAAALGLLVARSVPDIRRILKIKKM
Ga0348332_1103822023300032515Plant LitterMRTLGYITAVTMAAAAAALGVLAVMSVPDMQRYLKIKKM
Ga0348332_1209835613300032515Plant LitterMRALGYITAVTMAAAAATLGLLAAMSVPDMRRYLKIRRM
Ga0348332_1457960233300032515Plant LitterMRTLGYITAVTLTAATATLGVLAVMSVPDVRRYLKIKKM
Ga0315741_1020007113300032739Forest SoilMRTLGQITAVALAGAGAGLGLLMVMSWPDVQRYLKIRNM
Ga0315741_1203403623300032739Forest SoilGEDRRDEMRTLGQITAVALAATSAALGLLMVMSWPDVRRYLKIRKM
Ga0335081_1156299413300032892SoilMRTLGYITAVTMAAAAAPLGVLTVMSLPDARRYLKIRKM
Ga0335075_1038862423300032896SoilMRALGLTIGVIIAVASMALGLLVITSLPDVRRYLKIRKM
Ga0335075_1146699613300032896SoilMRTLGYTTAVTMTAVTAVLGLLAVMSLPDIRRYLKIKKM
Ga0335072_10007504153300032898SoilMRTLGYLTAVTMAAAAAALGLLTMMSLPDIRRYLKIRKM
Ga0247830_1169782923300033551SoilRHTMRTLGYITAVTIAAAAAVLGLLAVMSLPDIRQYLKIRKM


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