Metagenome / Metatranscriptome Family F040361

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F040361
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	43 residues
Representative Sequence	IRILLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWKLHPE
Number of Associated Samples	131
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	95.06 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (54.321 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.605 % of family members)
Environment Ontology (ENVO)	Unclassified (24.691 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.531 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.62% β-sheet: 0.00% Coil/Unstructured: 46.38%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF00582	Usp	43.21
PF00067	p450	13.58
PF07883	Cupin_2	1.85
PF01381	HTH_3	1.23
PF02694	UPF0060	0.62
PF07282	OrfB_Zn_ribbon	0.62
PF13561	adh_short_C2	0.62
PF00117	GATase	0.62
PF01979	Amidohydro_1	0.62
PF13193	AMP-binding_C	0.62
PF00732	GMC_oxred_N	0.62
PF13520	AA_permease_2	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	13.58
COG1742	Uncharacterized inner membrane protein YnfA, drug/metabolite transporter superfamily	General function prediction only [R]	0.62
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.32 %
Unclassified	root	N/A	45.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.32 %
Unclassified	root	N/A	45.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.32 %
Unclassified	root	N/A	45.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.70 %
Unclassified	root	N/A	45.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.70 %
Unclassified	root	N/A	45.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.68 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	32.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.62 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.62 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.72 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.62 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.72 %
Mycobacterium avium complex (MAC)	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC)	0.62 %
Geodermatophilus poikilotrophus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus poikilotrophus	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.72 %
Mycobacterium intracellulare	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium intracellulare	0.62 %
Geodermatophilus poikilotrophus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus poikilotrophus	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.72 %
Mycobacterium intracellulare subsp. yongonense	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium intracellulare → Mycobacterium intracellulare subsp. yongonense	0.62 %
Geodermatophilus poikilotrophus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus poikilotrophus	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.72 %
Mycobacterium intracellulare subsp. yongonense 05-1390	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium intracellulare → Mycobacterium intracellulare subsp. yongonense → Mycobacterium intracellulare subsp. yongonense 05-1390	0.62 %
Geodermatophilus poikilotrophus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus poikilotrophus	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_108260882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005334\|Ga0068869_100822992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300005345\|Ga0070692_10817318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300005363\|Ga0008090_15776872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1563	Open in IMG/M
3300005434\|Ga0070709_11599736	Not Available	531	Open in IMG/M
3300005435\|Ga0070714_102258083	Not Available	529	Open in IMG/M
3300005468\|Ga0070707_101384783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300005563\|Ga0068855_101462925	Not Available	702	Open in IMG/M
3300005577\|Ga0068857_101136929	Not Available	755	Open in IMG/M
3300005578\|Ga0068854_101767522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300005602\|Ga0070762_11043095	Not Available	562	Open in IMG/M
3300005618\|Ga0068864_102182193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300005764\|Ga0066903_102968458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300005764\|Ga0066903_103674775	Not Available	825	Open in IMG/M
3300005764\|Ga0066903_105847922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300005764\|Ga0066903_106945244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium intracellulare → Mycobacterium intracellulare subsp. yongonense → Mycobacterium intracellulare subsp. yongonense 05-1390	587	Open in IMG/M
3300006028\|Ga0070717_10982144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300006163\|Ga0070715_10585748	Not Available	652	Open in IMG/M
3300006173\|Ga0070716_100497546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300006575\|Ga0074053_11882290	Not Available	713	Open in IMG/M
3300006605\|Ga0074057_12328611	Not Available	633	Open in IMG/M
3300006806\|Ga0079220_11499317	Not Available	578	Open in IMG/M
3300006806\|Ga0079220_11631752	Not Available	560	Open in IMG/M
3300006844\|Ga0075428_100708906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1072	Open in IMG/M
3300006854\|Ga0075425_100875285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1028	Open in IMG/M
3300006854\|Ga0075425_101355979	Not Available	805	Open in IMG/M
3300006903\|Ga0075426_11073066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300006954\|Ga0079219_10263747	Not Available	1036	Open in IMG/M
3300006954\|Ga0079219_10796666	Not Available	741	Open in IMG/M
3300006954\|Ga0079219_12067713	Not Available	544	Open in IMG/M
3300009101\|Ga0105247_10332744	Not Available	1063	Open in IMG/M
3300009176\|Ga0105242_10719120	Not Available	979	Open in IMG/M
3300009553\|Ga0105249_10730016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1052	Open in IMG/M
3300009792\|Ga0126374_11144098	Not Available	620	Open in IMG/M
3300010046\|Ga0126384_11952067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300010358\|Ga0126370_10261141	Not Available	1350	Open in IMG/M
3300010358\|Ga0126370_11135597	Not Available	722	Open in IMG/M
3300010359\|Ga0126376_11069672	Not Available	812	Open in IMG/M
3300010359\|Ga0126376_11514340	Not Available	700	Open in IMG/M
3300010360\|Ga0126372_10283978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1443	Open in IMG/M
3300010360\|Ga0126372_10969782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300010361\|Ga0126378_11739642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300010361\|Ga0126378_13420536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300010366\|Ga0126379_10157865	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300010366\|Ga0126379_13087128	Not Available	557	Open in IMG/M
3300010371\|Ga0134125_12446955	Not Available	568	Open in IMG/M
3300010371\|Ga0134125_12689622	Not Available	541	Open in IMG/M
3300010375\|Ga0105239_11686164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300010376\|Ga0126381_101021617	Not Available	1193	Open in IMG/M
3300010376\|Ga0126381_101552964	Not Available	956	Open in IMG/M
3300010379\|Ga0136449_102377738	Not Available	765	Open in IMG/M
3300010396\|Ga0134126_11398004	Not Available	773	Open in IMG/M
3300010398\|Ga0126383_13071055	Not Available	545	Open in IMG/M
3300010880\|Ga0126350_10972391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300012096\|Ga0137389_11808107	Not Available	507	Open in IMG/M
3300012189\|Ga0137388_10379643	Not Available	1306	Open in IMG/M
3300012200\|Ga0137382_10770324	Not Available	691	Open in IMG/M
3300012201\|Ga0137365_10991632	Not Available	610	Open in IMG/M
3300012209\|Ga0137379_10546577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus poikilotrophus	1066	Open in IMG/M
3300012209\|Ga0137379_10925025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300012350\|Ga0137372_10000810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30252	Open in IMG/M
3300012351\|Ga0137386_10241032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1300	Open in IMG/M
3300012961\|Ga0164302_11232317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300012971\|Ga0126369_10106697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2548	Open in IMG/M
3300013296\|Ga0157374_10430798	Not Available	1319	Open in IMG/M
3300014056\|Ga0120125_1175872	Not Available	528	Open in IMG/M
3300014969\|Ga0157376_12928087	Not Available	517	Open in IMG/M
3300015359\|Ga0134085_10478691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300016270\|Ga0182036_10810480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300016270\|Ga0182036_11100827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300016270\|Ga0182036_11349320	Not Available	596	Open in IMG/M
3300016294\|Ga0182041_10789248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300016387\|Ga0182040_10818034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300017942\|Ga0187808_10222282	Not Available	842	Open in IMG/M
3300017961\|Ga0187778_10550257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300017961\|Ga0187778_10658102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300017972\|Ga0187781_10839790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300017974\|Ga0187777_11305094	Not Available	533	Open in IMG/M
3300018064\|Ga0187773_10734597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300019362\|Ga0173479_10820986	Not Available	517	Open in IMG/M
3300019888\|Ga0193751_1022303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3096	Open in IMG/M
3300020010\|Ga0193749_1065891	Not Available	681	Open in IMG/M
3300020082\|Ga0206353_10812466	Not Available	873	Open in IMG/M
3300020580\|Ga0210403_10317605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1276	Open in IMG/M
3300021403\|Ga0210397_10176164	Not Available	1513	Open in IMG/M
3300021478\|Ga0210402_10587509	Not Available	1033	Open in IMG/M
3300021559\|Ga0210409_10913360	Not Available	752	Open in IMG/M
3300021560\|Ga0126371_10949757	Not Available	1002	Open in IMG/M
3300021560\|Ga0126371_11001507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	977	Open in IMG/M
3300021560\|Ga0126371_11482459	Not Available	807	Open in IMG/M
3300021560\|Ga0126371_13826021	Not Available	507	Open in IMG/M
3300024251\|Ga0247679_1078715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300024331\|Ga0247668_1119548	Not Available	534	Open in IMG/M
3300025321\|Ga0207656_10704541	Not Available	517	Open in IMG/M
3300025898\|Ga0207692_10021681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2942	Open in IMG/M
3300025898\|Ga0207692_10773412	Not Available	627	Open in IMG/M
3300025903\|Ga0207680_10317313	Not Available	1089	Open in IMG/M
3300025905\|Ga0207685_10460741	Not Available	663	Open in IMG/M
3300025906\|Ga0207699_10311414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1102	Open in IMG/M
3300025910\|Ga0207684_10351108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1269	Open in IMG/M
3300025915\|Ga0207693_11120964	Not Available	597	Open in IMG/M
3300025931\|Ga0207644_10793396	Not Available	792	Open in IMG/M
3300025936\|Ga0207670_11020118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300026095\|Ga0207676_11876969	Not Available	598	Open in IMG/M
3300026304\|Ga0209240_1090498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1112	Open in IMG/M
3300026310\|Ga0209239_1225879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300026316\|Ga0209155_1239227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300027725\|Ga0209178_1254134	Not Available	636	Open in IMG/M
3300027725\|Ga0209178_1261214	Not Available	628	Open in IMG/M
3300027775\|Ga0209177_10258205	Not Available	647	Open in IMG/M
3300027857\|Ga0209166_10293440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300027884\|Ga0209275_10733249	Not Available	569	Open in IMG/M
3300027903\|Ga0209488_10048616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3119	Open in IMG/M
3300028875\|Ga0307289_10141057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300028906\|Ga0308309_11523450	Not Available	571	Open in IMG/M
3300030494\|Ga0310037_10477159	Not Available	508	Open in IMG/M
3300030580\|Ga0311355_10331402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1516	Open in IMG/M
3300031128\|Ga0170823_13352574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300031474\|Ga0170818_111214407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300031561\|Ga0318528_10560930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300031573\|Ga0310915_10857115	Not Available	638	Open in IMG/M
3300031668\|Ga0318542_10775089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300031680\|Ga0318574_10663519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300031680\|Ga0318574_10859364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300031681\|Ga0318572_10438963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300031713\|Ga0318496_10167917	Not Available	1201	Open in IMG/M
3300031720\|Ga0307469_11185570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300031720\|Ga0307469_12212419	Not Available	536	Open in IMG/M
3300031744\|Ga0306918_10624928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300031748\|Ga0318492_10344137	Not Available	780	Open in IMG/M
3300031751\|Ga0318494_10287232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300031765\|Ga0318554_10310756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300031765\|Ga0318554_10708438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300031769\|Ga0318526_10265800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300031782\|Ga0318552_10204829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	998	Open in IMG/M
3300031795\|Ga0318557_10357190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300031798\|Ga0318523_10060042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1807	Open in IMG/M
3300031799\|Ga0318565_10009336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3997	Open in IMG/M
3300031799\|Ga0318565_10143947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1155	Open in IMG/M
3300031799\|Ga0318565_10565463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300031821\|Ga0318567_10321057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300031831\|Ga0318564_10174624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300031833\|Ga0310917_10822343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300031897\|Ga0318520_10289874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	984	Open in IMG/M
3300031897\|Ga0318520_10550752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300031910\|Ga0306923_11823629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300031941\|Ga0310912_10292480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1260	Open in IMG/M
3300031942\|Ga0310916_10152795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1905	Open in IMG/M
3300031945\|Ga0310913_10886413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300031946\|Ga0310910_10835844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300031954\|Ga0306926_10231443	Not Available	2292	Open in IMG/M
3300032008\|Ga0318562_10720765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300032043\|Ga0318556_10132503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1280	Open in IMG/M
3300032180\|Ga0307471_100541814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1317	Open in IMG/M
3300032261\|Ga0306920_101770745	Not Available	873	Open in IMG/M
3300032261\|Ga0306920_102886560	Not Available	652	Open in IMG/M
3300032261\|Ga0306920_103468106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300032783\|Ga0335079_10445372	Not Available	1389	Open in IMG/M
3300032895\|Ga0335074_10458723	Not Available	1346	Open in IMG/M
3300032898\|Ga0335072_11435933	Not Available	594	Open in IMG/M
3300032955\|Ga0335076_10573512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1011	Open in IMG/M
3300033158\|Ga0335077_10955630	Not Available	859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.27%
Host-Associated	Host-Associated	11.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.65%
Plants	Host-Associated → Plants	11.73%
Aquatic	Environmental → Aquatic	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.32%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Peat	Environmental → Terrestrial → Peat	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	14.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.23%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.62%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.09%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.09%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.09%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.23%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.23%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.62%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1082608822	3300005332	Tropical Forest Soil	IRILLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWKLHPE*
Ga0068869_1008229921	3300005334	Miscanthus Rhizosphere	QLLLLLPVVMSFWFLFYMPRWRRRVREKARSLRRWNLHPE*
Ga0070692_108173182	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FTGLQLLLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWNLHPE*
Ga0008090_157768723	3300005363	Tropical Rainforest Soil	RILILLPVIMGFWFIFYMPRWRRRVREQARSLQRWKLHPE*
Ga0070709_115997362	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VLGFRILLLLPVLMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE*
Ga0070714_1022580831	3300005435	Agricultural Soil	FRILLLLPVMMSFWYLFYMPRWRRRVRQRARSLTSWQLHPE*
Ga0070707_1013847832	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ALVPFLGIPILLVLPLVMGFWYMFYMPRWRRRVREQARSLRKWKLRPE*
Ga0068855_1014629252	3300005563	Corn Rhizosphere	GIRIMILLPVVMSFWFLFYMPRWRRRVRLQARSLQRWQLHPE*
Ga0068857_1011369292	3300005577	Corn Rhizosphere	LLPVVMSFWFLFYMPRWRRRVRQRARSLTSWQLHPE*
Ga0068854_1017675221	3300005578	Corn Rhizosphere	LLLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWQLHPE*
Ga0070762_110430952	3300005602	Soil	PVVMSFWFLFYMPRWRRRVRQQARSLRKWKLHPE*
Ga0068864_1021821932	3300005618	Switchgrass Rhizosphere	LVLPLVMGFWYMFYMPRWRRRVREQARSLRKWKLRPE*
Ga0066903_1029684581	3300005764	Tropical Forest Soil	LVPFLGIPILFVLPIAMGFWFMFYMPRWRRRVREQTRNLRKWKLRPE*
Ga0066903_1036747751	3300005764	Tropical Forest Soil	IALAPFLGPRILLLLPLVMGFWYLFYMPRWRRRVREQTRSLRKWKLRPE*
Ga0066903_1058479222	3300005764	Tropical Forest Soil	LLPIVMSFWFLFYMPRWRRRVREQARSLRRWKLHPE*
Ga0066903_1069452442	3300005764	Tropical Forest Soil	PILFVLPIVLGFWFMFYMPRWRRRVREHTRNLRKWKLRPD*
Ga0070717_109821443	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LLPVLMSFWFLFYMPRWRRQVRERTRNLRRWKLHPE*
Ga0070715_105857481	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LPVVMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE*
Ga0070716_1004975461	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ILLLLPVVMSFWFLFYMPRWRRRVRQRARSLTSWQLHPE*
Ga0074053_118822901	3300006575	Soil	IPILILTAVAGIRILILLPVVMSFWFLFYMPRWRRRVRLQARNLQKWQLHPE*
Ga0074057_123286112	3300006605	Soil	FLGIPILLVLPLVMGFWYMFYMPRWRRRVREQARSLRKWKLRPE*
Ga0079220_114993172	3300006806	Agricultural Soil	VALSVVLGFRILLLLPVMMSFWYLFYMPRWRRRVRQRARSLTSWQLHPE*
Ga0079220_116317522	3300006806	Agricultural Soil	ILLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE*
Ga0075428_1007089063	3300006844	Populus Rhizosphere	FLGIPILMVLPIVMGFWFVFYMPRWRRRVREQARNLRKWKLRPE*
Ga0075425_1008752851	3300006854	Populus Rhizosphere	PILALSTIAGIRILLLLPVVMSFWFLFYMPRWRRRVRQQARSLRRWNLHPE*
Ga0075425_1013559791	3300006854	Populus Rhizosphere	IPILILTAVAGIRIMILLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE*
Ga0075426_110730661	3300006903	Populus Rhizosphere	LVPFLGIPILMVLPIVMGFWFVFYMPRWRRRVREQARSLRKWKLRPE*
Ga0079219_102637471	3300006954	Agricultural Soil	GFRILLLLPVMMSFWYLFYMPRWRRRVRQRARSLTSWQLHPE*
Ga0079219_107966661	3300006954	Agricultural Soil	LLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE*
Ga0079219_120677132	3300006954	Agricultural Soil	PVVMGFWFLFYMPRWRRRVREQARSLRRWQLHPE*
Ga0105247_103327441	3300009101	Switchgrass Rhizosphere	PILILTAVAGIKILALLPVVMGFWFLFYMPRWRRRVRLQARSLQRWQLHPE*
Ga0105242_107191201	3300009176	Miscanthus Rhizosphere	LLPVVMSFWFLFYMPRWRRRVRLQARSLQRWQLHPE*
Ga0105249_107300163	3300009553	Switchgrass Rhizosphere	IPILMVLPIVMGFWFVFYMPRWRRRVREQTRNLRKWKLRPE*
Ga0126374_111440982	3300009792	Tropical Forest Soil	PVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE*
Ga0126384_119520672	3300010046	Tropical Forest Soil	GLRLLILLPVLMSFWFLFYMPRWRRQVRERARNLRRWKLHPE*
Ga0126370_102611411	3300010358	Tropical Forest Soil	LAAFAGFQLLVLLPVVMGFWFIFYMPRWRRRVREKTRSLRRWQLHPE*
Ga0126370_111355971	3300010358	Tropical Forest Soil	ALTPFLGPRILLLIPLLMGFWYLFYMPRWRRQVREQARSLRKWKLRPE*
Ga0126376_110696722	3300010359	Tropical Forest Soil	GLQLLLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWKLHPE*
Ga0126376_115143402	3300010359	Tropical Forest Soil	LTPFLGPRILLLIPLLMGFWYLFYMPRWRRQVREQARSLRKWKLRPE*
Ga0126372_102839783	3300010360	Tropical Forest Soil	PVVMGFWFMFYMPRWRRRVREQARSLRKWKLRPE*
Ga0126372_109697822	3300010360	Tropical Forest Soil	GFQLLVLLPVVMGFWFFFYMPRWRRRVREQARSLRRWQLHPE*
Ga0126378_117396423	3300010361	Tropical Forest Soil	VLPVVMGFWFMFYMPRWRRRVRENARNLRKWKLRPE*
Ga0126378_134205362	3300010361	Tropical Forest Soil	VLLPVVMGFWFIFYMPRWRRRVREQARSLRRWQLHPE*
Ga0126379_101578654	3300010366	Tropical Forest Soil	PFLGIPILFVIPIVMGFWFMFYMPRWRRRVREQTRNLRKWKLRPE*
Ga0126379_130871281	3300010366	Tropical Forest Soil	APFLGPRILLLLPLVMGFWYLFYMPRWRRRVREQTRSLRKWKLRPE*
Ga0134125_124469551	3300010371	Terrestrial Soil	RVLLLLPIVMSFWFLFYMPRWRRRVRQKSRSLSRWQLHSE*
Ga0134125_126896222	3300010371	Terrestrial Soil	LILTAVAGIRIMILLPVVMSFWFLFYMPRWRRRVRLQARSLQRWQLHPE*
Ga0105239_116861642	3300010375	Corn Rhizosphere	PVVMSFWFLFYMPRWRRRVREQARSLRRWNLHPE*
Ga0126381_1010216173	3300010376	Tropical Forest Soil	GPRILLLVPLVMSFWYLFYMPRWRRRVREQARSLRKWKLRPE*
Ga0126381_1015529642	3300010376	Tropical Forest Soil	PFLGIRILLLLPVVMSFWFMFYMPRWRRQVRERARSLRRWKLHPE*
Ga0136449_1023777381	3300010379	Peatlands Soil	PVVMGFWFLFYMPRWRRRVRQQARSLRRWQLHPE*
Ga0134126_113980041	3300010396	Terrestrial Soil	ILTAVAGIRIMILLPVVMSFWFLFYMPRWRRRVRLRARRLQRWQLHPE*
Ga0126383_130710551	3300010398	Tropical Forest Soil	PVVVLAAFGGFQLLVLLPVVMGFWFFFYMPRWRRRVREQARSLRRWKLHPE*
Ga0126350_109723911	3300010880	Boreal Forest Soil	ILALSLVAGIRILLLLPVAMSFWFIFYMPRWRRRVREQARSLRRWKLTPE*
Ga0137389_118081071	3300012096	Vadose Zone Soil	PFLGPRILLLLPLVMGFWYLFYMPRWRRQVREQTRSLRKWKLRPE*
Ga0137388_103796431	3300012189	Vadose Zone Soil	IPIVVLSVVAGIRILILLPVVMSFWFLCYVPRWRQRVREQARSLRKWQLHPE*
Ga0137382_107703241	3300012200	Vadose Zone Soil	TAVAGIRILILLPVVMSFWFLFYMPRWRRRVRQQARNLQRWQLHPE*
Ga0137365_109916322	3300012201	Vadose Zone Soil	VLGFRILLLLPVVMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE*
Ga0137379_105465771	3300012209	Vadose Zone Soil	LGVRIMMLLPIVLGFWFIFYMPRWRRRVREQARNLRKWKLRPE*
Ga0137379_109250252	3300012209	Vadose Zone Soil	LTAVAGIRILILLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE*
Ga0137372_1000081031	3300012350	Vadose Zone Soil	LILLPVVMSFWFLFYMPRWRRRVRLQARNLQKWQLHPE*
Ga0137386_102410323	3300012351	Vadose Zone Soil	AGFRILVLLPLVMGFWFMFYMPRWRRQVRERARSLRRWKLHPE*
Ga0164302_112323172	3300012961	Soil	VVLALFTGLQLLLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWQLHPE*
Ga0126369_101066974	3300012971	Tropical Forest Soil	VAGIRILLLLPVVMSFWFLFYMPRWRRRVRQRARSLTSWQLHPE*
Ga0157374_104307981	3300013296	Miscanthus Rhizosphere	RIMILLPVVMSFWFLFYMPRWRRRVRLQARSLQRWQLHPE*
Ga0120125_11758721	3300014056	Permafrost	LTPFAGIRILLLLPVVMSFWFMFYMPRWRRQVRERARNLRRWKLYPE*
Ga0157376_129280871	3300014969	Miscanthus Rhizosphere	ILTAVAGIRIMILLPVVMSFWFLFYMPRWRRRVRLQARSLQRWQLHPE*
Ga0134085_104786911	3300015359	Grasslands Soil	IAALVPFLGIPILFVLPIVMGFWFMFYMPRWRRRVREQARNLRKWKLRPE*
Ga0182036_108104801	3300016270	Soil	VIVLAAFAGFQLLMLLPVVMGFWFFFYMPRWRRRVREQARSLRRWQLHPE
Ga0182036_111008273	3300016270	Soil	VLLPVVMGFWFIFYMPRWRRRVREQARSLQRWQLHPE
Ga0182036_113493202	3300016270	Soil	PIVAASVFLGIRILLLLPVVMGFWFLFYMPRWRRRVRQQARSLRRWKLHPE
Ga0182041_107892482	3300016294	Soil	VPIVVLAAFAGFQLLVLLPVVMGFWFLFYMPRWRRRVREQARSLRRWQLHPE
Ga0182040_108180341	3300016387	Soil	PLLGLRIMILLPLVMGFWFIFYMPRWRRRAREQARSLRRWKLRPE
Ga0187808_102222821	3300017942	Freshwater Sediment	IRILILLPVLMSFWFIFYMPRWRRSVREQARSLRRWKLHPE
Ga0187778_105502573	3300017961	Tropical Peatland	GARIMILLPLLMGFWFILYMPRWRRRVREQARSLQKWKLRPE
Ga0187778_106581023	3300017961	Tropical Peatland	LLPVVLGGWYLWYMPMWRRRVRKRARNLPKWQLHPE
Ga0187781_108397902	3300017972	Tropical Peatland	AGLRILILLPVLMSFWFLFYMPRWRRQVRERARNLRRWKLHPE
Ga0187777_113050942	3300017974	Tropical Peatland	LPLVMGFWFILYMPRWRRRVREQARNLQKWKLRPE
Ga0187773_107345972	3300018064	Tropical Peatland	LGLQIMVLLPLVMGFWFIFYMPRWRRRVREQARSLQRWKLRPE
Ga0173479_108209862	3300019362	Soil	GIRILILLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE
Ga0193751_10223031	3300019888	Soil	RILLLLPVVMSFWFMFYMPRWRRQVRQRARNLRSWKLYPE
Ga0193749_10658912	3300020010	Soil	FAGIRILLLLPVVMSFWFMFYMPRWRRQVRQRARNLRSWKLYPE
Ga0206353_108124661	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	AGIRILILLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE
Ga0210403_103176051	3300020580	Soil	SVFGGIRILLLLPVVMSFWFLFYMPRWRRRVRQQARSLRRWKLHPE
Ga0210397_101761642	3300021403	Soil	RILLLLPVVMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE
Ga0210402_105875091	3300021478	Soil	LLLPVLMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE
Ga0210409_109133602	3300021559	Soil	FRILLLLPVVMSFWFLFYMPRWRRRVRQQARNLTKWQLHPE
Ga0126371_109497573	3300021560	Tropical Forest Soil	LVLLPVVMGFWFIFYMPRWRRRVREQARSLRRWQLHPE
Ga0126371_110015073	3300021560	Tropical Forest Soil	FVIPIVMGFWFMFYMPRWRRRVREQARNLRKWKLRPD
Ga0126371_114824593	3300021560	Tropical Forest Soil	PRILLLLPLVMGFWYLFYMPRWRRRVRERTRSLHKWKLRPE
Ga0126371_138260212	3300021560	Tropical Forest Soil	GFQLLVLLPVVMGFWFIFYMPRWRRRVREQARNLRRWQLHPE
Ga0247679_10787151	3300024251	Soil	QLLLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWNLHPE
Ga0247668_11195482	3300024331	Soil	RILLLLPVLMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE
Ga0207656_107045412	3300025321	Corn Rhizosphere	AGIRIMILLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHRE
Ga0207692_100216815	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LVLPLVMGFWYMFYMPRWRRRVREQARSLRKWKLRPE
Ga0207692_107734121	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	STVVGLRVLLLLPIVMSFWFLFYMPRWRRRVRQKSRSLSRWQLHPE
Ga0207680_103173132	3300025903	Switchgrass Rhizosphere	RIMILLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE
Ga0207685_104607412	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LLLLPVVMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE
Ga0207699_103114143	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VPFLGIPILFVLPVVMDFWFMLYMPRWRRRVREQARNMRKWQLRPE
Ga0207684_103511083	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PVAGIRILMLLPLAMGFWFMFYMPRWRRQVREHARNLRRWKPHPE
Ga0207693_111209642	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ALSVVLGLRILLLLPVVMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE
Ga0207644_107933961	3300025931	Switchgrass Rhizosphere	LTAVAGIRIMILLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE
Ga0207670_110201181	3300025936	Switchgrass Rhizosphere	VLPLVMGFWYMFYMPRWRRRVREQARSLRKWKLRPE
Ga0207676_118769691	3300026095	Switchgrass Rhizosphere	LLLPVVMSFWFLFYMPRWRRRVRQRARSLTSWQLHPE
Ga0209240_10904981	3300026304	Grasslands Soil	LRLLLLLPVLMSFWFLFYMPRWRRQVRQRARSLRRWKLHPE
Ga0209239_12258791	3300026310	Grasslands Soil	LGIPILLVLPLVMGFWYMFYMPRWRRRVREQARSLRKWKLSPE
Ga0209155_12392272	3300026316	Soil	IAALVPFLGIPILLVMPIVMGFWFVFYMPRWRRRVREQARSLRKWKLRPE
Ga0209178_12541342	3300027725	Agricultural Soil	TAVAGIKILALLPVVMGFWFLFYMPRWRRRVRLQARSLQRWQLHPE
Ga0209178_12612141	3300027725	Agricultural Soil	ILALSAIAGIRILLLLPVVMSFWFLFYMPRWRRRVRQQARSLRRWNLHPE
Ga0209177_102582052	3300027775	Agricultural Soil	LLPVVMSFWFLFYMPRWRRRVRLQARNLQRWQLHPE
Ga0209166_102934402	3300027857	Surface Soil	FLGPRILLLLPLVMGFWYLFYMPRWRRQVRAQARNLRKWKLRPE
Ga0209275_107332492	3300027884	Soil	LLPVVMSFWFLFYMPRWRRRVREQARSLRRWKLHPE
Ga0209488_100486164	3300027903	Vadose Zone Soil	FRILLLLPVLMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE
Ga0307289_101410571	3300028875	Soil	VLPIVMGFWFVFYMPRWRRRVREQARSLRKWKLRPE
Ga0308309_115234502	3300028906	Soil	VPIVALSVVLGFRILLLLPVVMSFWFLFYMPRWRRRVRQQARSLQRWQLHPE
Ga0310037_104771591	3300030494	Peatlands Soil	LSAFAGPRILMLLPVVMGFWFLFYMPRWRRRVREQARNLRRWQLHPE
Ga0311355_103314021	3300030580	Palsa	LRILLLLPVLMSFWFLFYMPRWRREVRQRARSLRRWQLHPE
Ga0170823_133525742	3300031128	Forest Soil	LGLRLLLLLPVLMSFWFLFYMPRWRRQVRERARNLTRWQLHPE
Ga0170818_1112144072	3300031474	Forest Soil	AAVAGIRIMLLLPVVMSFWFLFYMPRWRRRVRQQARSLRRWKLHPE
Ga0318528_105609302	3300031561	Soil	TRIMIVLPLVMGFWFILYMPRWRRRVREQARSLQKWKLRPE
Ga0310915_108571152	3300031573	Soil	PIVALSLFAGIRILLLLPVVMGFWFLFYMPRWRRRVRQQARSLRRWKLHPE
Ga0318542_107750892	3300031668	Soil	LVPFAGTRILILLPVIMGFWFVFYMPRWRRRVREQARSLRRWNLHPE
Ga0318574_106635191	3300031680	Soil	LMLLPVVMGFWFIFYMPRWRRRVREHARSLQRWQLHPE
Ga0318574_108593641	3300031680	Soil	PVVALVPFAGARILILLPVIMGFWFVFYMPRWRRRVREQARSLRRWNLHPE
Ga0318572_104389632	3300031681	Soil	VALIPLLGTRIMILLPLVMGFWFILYMPRWRRRVREQARSLQKWKLRPE
Ga0318496_101679171	3300031713	Soil	LLVLLPVVMGFWFLFYMPRWRRRVREQARSLRRWQLHPE
Ga0307469_111855701	3300031720	Hardwood Forest Soil	ILFVLPVLMGFWFMFYMPRWRRRVREHARNLRKWKLRPE
Ga0307469_122124192	3300031720	Hardwood Forest Soil	QLLILLPVVMSFWFLFYMPRWRRRVREQARSLRRWNLHPE
Ga0306918_106249281	3300031744	Soil	LGLRIMILLPLVMGFWFIFYMPRWRRRAREQARSLRRWKLRPE
Ga0318492_103441371	3300031748	Soil	LLPVVMSFWFLFYMPRWRRRVREQARSLRRWKLTPE
Ga0318494_102872323	3300031751	Soil	GTRIMIVLPLVMGFWFILYMPRWRRRVREQARSLQKWKLRPE
Ga0318554_103107563	3300031765	Soil	LILLPVIMGFWFVFYMPRWRRRVREQARSLRRWNLHPE
Ga0318554_107084382	3300031765	Soil	GFQLLMLLPVVMGFWFIFYMPRWRRRVREHARSLQRWQLHPE
Ga0318526_102658002	3300031769	Soil	VPVFGTRVMILLPVVMGFWFVFYMPRWRRRVREQARSLQKWTLRPE
Ga0318552_102048291	3300031782	Soil	PVAGFQLLVLLPVVMGFWFIFYMPRWRRRVREHARSLQRWQLHPE
Ga0318557_103571901	3300031795	Soil	LLGLRIMILLPLVMGFWFIFYMPRWRRRAREQARSLRRWKLRPE
Ga0318523_100600421	3300031798	Soil	IMILLPLVMGFWFIFYMPRWRRRAREQARSLRRWKLRPE
Ga0318565_100093361	3300031799	Soil	LRIMILLPLVMGFWFIFYMPRWRRRAREQARSLRRWKLRPE
Ga0318565_101439473	3300031799	Soil	IPLLGARIMVLLPLVMGFWFILYMPRWRRRVREQARSLQKWTLRPE
Ga0318565_105654631	3300031799	Soil	AFAGFQLLVLLPVVMGFWFIFYMPRWRRRVREQARSLQRWQLHPE
Ga0318567_103210571	3300031821	Soil	MVLLPLVMGFWFILYMPRWRRRVREQARSLQKWTLRPE
Ga0318564_101746243	3300031831	Soil	VALIPLLGPRIMILLPLVMGFWFILYMPRWRRRVREQARSLQKWTLRPE
Ga0310917_108223432	3300031833	Soil	FAGIRILLLLPVVMGFWFLFYMPRWRRRVRQQARSLRRWKLHPE
Ga0318520_102898741	3300031897	Soil	LPLVMGFWFIFYMPRWRRRAREQARSLRRWKLRPE
Ga0318520_105507522	3300031897	Soil	GLRILLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWKLHPE
Ga0306923_118236292	3300031910	Soil	VALAAFAGFQLLVLLPVVMGFWFIFYMPRWRRRVREQARSLQRWQLHPE
Ga0310912_102924804	3300031941	Soil	GLRIMILLPLVMGFWFIFYMPRWRRRAREQARSLRRWKLRPE
Ga0310916_101527951	3300031942	Soil	MILLPLVMGFWFIFYMPRWRRRAREQARSLRRWKLRPE
Ga0310913_108864131	3300031945	Soil	FVALIPLLGARIMVLLPLVMGFWFILYMPRWRRRVREQARSLQKWTLRPE
Ga0310910_108358442	3300031946	Soil	MLLPVVMGFWFIFYMPRWRRRVREHARSLQRWQLHPE
Ga0306926_102314434	3300031954	Soil	AGFQLLVLLPVVMGFWFIFYMPRWRRRVREQARSLRRWQLHPE
Ga0318562_107207652	3300032008	Soil	PIVALSVVGGLRILLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWKLHPE
Ga0318556_101325033	3300032043	Soil	FQLLVLLPVVMGFWFIFYMPRWRRRVREQARSLQRWQLHPE
Ga0307471_1005418143	3300032180	Hardwood Forest Soil	SVFGGIRFLLLLPVVMSFWFLFYMPRWRRRVREQARSLRRWKLHPE
Ga0306920_1017707451	3300032261	Soil	LLPVVMGFWFLFYMPRWRRRVRQQARSLRRWKLHPE
Ga0306920_1028865602	3300032261	Soil	ILLLLPLVMSFWYLFYMPRWRRRVREQARSLRKWKLRPE
Ga0306920_1034681061	3300032261	Soil	LPVLLSFWFLFYMPRWRRRVREQARNLRRWQLHPE
Ga0335079_104453723	3300032783	Soil	AVLTPFLGIRIVLLLPVVMSFWFMFYMPRWRRRVREQTRNLLKWKLRPE
Ga0335074_104587231	3300032895	Soil	AGVRIPLLLPVVMGFWYMFYMPRWRRQVRERARNLRRWKLHPE
Ga0335072_114359332	3300032898	Soil	LPVLMSFWFIFYMPRWRRRVRQKARSLNRWQLHPE
Ga0335076_105735121	3300032955	Soil	ILFVLPIAMGFWFMFYMPRWRRRVREQTRNLRKWKLRPE
Ga0335077_109556302	3300033158	Soil	LSVVLGFRILLLLPVLMSFWYLFYMPRWRRRVRQQARSLQRWQLHPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040361

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences