Metagenome Family F040310

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040310
Family Type	Metagenome
Number of Sequences	162
Average Sequence Length	43 residues
Representative Sequence	MRTPMHWRTERGRHFQAHPLQATFSLIASMLLAALVVLALVLSAR
Number of Associated Samples	110
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.01 %
% of genes near scaffold ends (potentially truncated)	35.80 %
% of genes from short scaffolds (< 2000 bps)	72.22 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.160 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.568 % of family members)
Environment Ontology (ENVO)	Unclassified (40.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.79% β-sheet: 0.00% Coil/Unstructured: 45.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF04073	tRNA_edit	5.56
PF13458	Peripla_BP_6	5.56
PF03992	ABM	4.94
PF09723	Zn-ribbon_8	4.32
PF10771	DUF2582	2.47
PF13620	CarboxypepD_reg	1.85
PF00990	GGDEF	1.23
PF06348	DUF1059	1.23
PF04430	DUF498	1.23
PF00582	Usp	1.23
PF00239	Resolvase	0.62
PF07366	SnoaL	0.62
PF12587	DUF3761	0.62
PF02517	Rce1-like	0.62
PF08592	Anthrone_oxy	0.62
PF00082	Peptidase_S8	0.62
PF03070	TENA_THI-4	0.62
PF00484	Pro_CA	0.62
PF10017	Methyltransf_33	0.62
PF12838	Fer4_7	0.62
PF07883	Cupin_2	0.62
PF13676	TIR_2	0.62
PF02353	CMAS	0.62
PF04116	FA_hydroxylase	0.62
PF10009	DUF2252	0.62
PF13442	Cytochrome_CBB3	0.62
PF00083	Sugar_tr	0.62
PF01910	Thiamine_BP	0.62
PF13602	ADH_zinc_N_2	0.62
PF00072	Response_reg	0.62
PF00106	adh_short	0.62
PF12769	PNTB_4TM	0.62
PF00873	ACR_tran	0.62
PF00534	Glycos_transf_1	0.62
PF08281	Sigma70_r4_2	0.62
PF05598	DUF772	0.62
PF01041	DegT_DnrJ_EryC1	0.62
PF01883	FeS_assembly_P	0.62
PF04542	Sigma70_r2	0.62
PF05015	HigB-like_toxin	0.62
PF08207	EFP_N	0.62
PF13466	STAS_2	0.62
PF07238	PilZ	0.62
PF03237	Terminase_6N	0.62
PF01740	STAS	0.62
PF00589	Phage_integrase	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	1.23
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	1.23
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.62
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.62
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.62
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.62
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.62
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.62
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.62
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.62
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.62
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.62
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.62
COG0011	Thiamin-binding stress-response protein YqgV, UPF0045 family	Coenzyme transport and metabolism [H]	0.62
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.62
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.62
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.62
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.62
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.62
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.62
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.62
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.62
COG0231	Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)	Translation, ribosomal structure and biogenesis [J]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.16 %
Unclassified	root	N/A	22.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.16 %
Unclassified	root	N/A	22.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.16 %
Unclassified	root	N/A	22.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.30 %
Unclassified	root	N/A	22.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.23 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.95 %
Unclassified	root	N/A	22.84 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.47 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.23 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.95 %
Unclassified	root	N/A	22.84 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.47 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.85 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.95 %
Unclassified	root	N/A	22.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.47 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.85 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.95 %
Unclassified	root	N/A	22.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.47 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.62 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.95 %
Unclassified	root	N/A	22.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.47 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.62 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_106000597	Not Available	567	Open in IMG/M
3300002245\|JGIcombinedJ26739_100085808	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300005174\|Ga0066680_10576032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300005181\|Ga0066678_10140248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1503	Open in IMG/M
3300005332\|Ga0066388_100260259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2376	Open in IMG/M
3300005332\|Ga0066388_100668065	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300005332\|Ga0066388_102381350	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005334\|Ga0068869_100053244	All Organisms → cellular organisms → Bacteria	2941	Open in IMG/M
3300005344\|Ga0070661_100182226	All Organisms → cellular organisms → Bacteria → Acidobacteria	1598	Open in IMG/M
3300005436\|Ga0070713_100608654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1038	Open in IMG/M
3300005440\|Ga0070705_100670730	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005445\|Ga0070708_101825392	Not Available	564	Open in IMG/M
3300005467\|Ga0070706_100057920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3576	Open in IMG/M
3300005468\|Ga0070707_100785829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300005468\|Ga0070707_100980166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	811	Open in IMG/M
3300005540\|Ga0066697_10084172	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300005552\|Ga0066701_10111724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300005554\|Ga0066661_10007108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5370	Open in IMG/M
3300005556\|Ga0066707_10100651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1774	Open in IMG/M
3300005557\|Ga0066704_10055907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2505	Open in IMG/M
3300005568\|Ga0066703_10037648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2648	Open in IMG/M
3300005569\|Ga0066705_10056213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2227	Open in IMG/M
3300005764\|Ga0066903_104884470	Not Available	712	Open in IMG/M
3300005764\|Ga0066903_106899279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005842\|Ga0068858_100515216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300005843\|Ga0068860_100418663	Not Available	1328	Open in IMG/M
3300006034\|Ga0066656_10111710	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300006047\|Ga0075024_100200014	Not Available	936	Open in IMG/M
3300006050\|Ga0075028_100100085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1478	Open in IMG/M
3300006050\|Ga0075028_100233783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1004	Open in IMG/M
3300006059\|Ga0075017_100007015	All Organisms → cellular organisms → Bacteria → Acidobacteria	7135	Open in IMG/M
3300006059\|Ga0075017_100054866	All Organisms → cellular organisms → Bacteria → Acidobacteria	2688	Open in IMG/M
3300006059\|Ga0075017_100490902	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300006172\|Ga0075018_10250572	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300006173\|Ga0070716_100038282	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300006175\|Ga0070712_100009910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6007	Open in IMG/M
3300006175\|Ga0070712_100032636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3517	Open in IMG/M
3300006791\|Ga0066653_10501608	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006796\|Ga0066665_10185919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1603	Open in IMG/M
3300006796\|Ga0066665_11105219	Not Available	604	Open in IMG/M
3300006797\|Ga0066659_10614614	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300006804\|Ga0079221_10558245	Not Available	760	Open in IMG/M
3300006852\|Ga0075433_10317679	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300006852\|Ga0075433_10905129	Not Available	769	Open in IMG/M
3300006854\|Ga0075425_102871526	Not Available	529	Open in IMG/M
3300006871\|Ga0075434_100853667	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300007076\|Ga0075435_101685630	Not Available	556	Open in IMG/M
3300009012\|Ga0066710_102685977	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300009038\|Ga0099829_10032858	All Organisms → cellular organisms → Bacteria → Acidobacteria	3717	Open in IMG/M
3300009038\|Ga0099829_10051587	All Organisms → cellular organisms → Bacteria	3050	Open in IMG/M
3300009038\|Ga0099829_10055636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2948	Open in IMG/M
3300009038\|Ga0099829_10251618	Not Available	1441	Open in IMG/M
3300009038\|Ga0099829_10382415	Not Available	1162	Open in IMG/M
3300009088\|Ga0099830_10027213	All Organisms → cellular organisms → Bacteria	3816	Open in IMG/M
3300009088\|Ga0099830_10221429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1488	Open in IMG/M
3300009088\|Ga0099830_10369375	Not Available	1156	Open in IMG/M
3300009089\|Ga0099828_10576171	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300009089\|Ga0099828_10732184	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300009089\|Ga0099828_11686977	Not Available	557	Open in IMG/M
3300009090\|Ga0099827_10607729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300009137\|Ga0066709_100075111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3996	Open in IMG/M
3300009143\|Ga0099792_11151202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010048\|Ga0126373_10094532	All Organisms → cellular organisms → Bacteria	2752	Open in IMG/M
3300010048\|Ga0126373_12274440	Not Available	603	Open in IMG/M
3300010358\|Ga0126370_10932601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300010358\|Ga0126370_11764639	Not Available	598	Open in IMG/M
3300010373\|Ga0134128_10067920	All Organisms → cellular organisms → Bacteria → Acidobacteria	4092	Open in IMG/M
3300011269\|Ga0137392_10955451	Not Available	705	Open in IMG/M
3300011269\|Ga0137392_11454947	Not Available	544	Open in IMG/M
3300011270\|Ga0137391_10196072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1757	Open in IMG/M
3300011271\|Ga0137393_10493598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300012096\|Ga0137389_10014005	All Organisms → cellular organisms → Bacteria	5450	Open in IMG/M
3300012096\|Ga0137389_10536784	Not Available	1004	Open in IMG/M
3300012096\|Ga0137389_10669265	Not Available	892	Open in IMG/M
3300012189\|Ga0137388_10470749	All Organisms → cellular organisms → Bacteria → Acidobacteria	1166	Open in IMG/M
3300012189\|Ga0137388_10549842	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300012189\|Ga0137388_10569836	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300012189\|Ga0137388_11644882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300012189\|Ga0137388_11900701	Not Available	525	Open in IMG/M
3300012199\|Ga0137383_10865522	Not Available	660	Open in IMG/M
3300012202\|Ga0137363_10002659	All Organisms → cellular organisms → Bacteria	10695	Open in IMG/M
3300012202\|Ga0137363_10266541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1397	Open in IMG/M
3300012202\|Ga0137363_10590384	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300012205\|Ga0137362_10067244	All Organisms → cellular organisms → Bacteria	2959	Open in IMG/M
3300012205\|Ga0137362_11453084	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012209\|Ga0137379_10442605	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300012351\|Ga0137386_10080894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2277	Open in IMG/M
3300012356\|Ga0137371_10538699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300012359\|Ga0137385_10248652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1540	Open in IMG/M
3300012361\|Ga0137360_10001235	All Organisms → cellular organisms → Bacteria	15018	Open in IMG/M
3300012361\|Ga0137360_11788842	Not Available	520	Open in IMG/M
3300012362\|Ga0137361_11027048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300012917\|Ga0137395_10402939	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300012917\|Ga0137395_11216318	Not Available	526	Open in IMG/M
3300012929\|Ga0137404_11018542	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300012930\|Ga0137407_10125793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2233	Open in IMG/M
3300012930\|Ga0137407_10966158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300012930\|Ga0137407_10998344	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300012930\|Ga0137407_11309423	Not Available	688	Open in IMG/M
3300012930\|Ga0137407_11928551	Not Available	563	Open in IMG/M
3300012944\|Ga0137410_10578600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300012944\|Ga0137410_10713949	Not Available	836	Open in IMG/M
3300013296\|Ga0157374_10672663	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300013297\|Ga0157378_10690121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300014969\|Ga0157376_10366212	All Organisms → cellular organisms → Bacteria → Acidobacteria	1384	Open in IMG/M
3300015264\|Ga0137403_10832422	Not Available	776	Open in IMG/M
3300015373\|Ga0132257_100265297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2054	Open in IMG/M
3300016270\|Ga0182036_10495475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300016294\|Ga0182041_11527864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300016294\|Ga0182041_11840341	Not Available	562	Open in IMG/M
3300016387\|Ga0182040_10440995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300017659\|Ga0134083_10383590	Not Available	610	Open in IMG/M
3300017943\|Ga0187819_10363354	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300018088\|Ga0187771_10028857	All Organisms → cellular organisms → Bacteria	4209	Open in IMG/M
3300018431\|Ga0066655_10223766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300018433\|Ga0066667_10137976	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300019789\|Ga0137408_1030214	Not Available	774	Open in IMG/M
3300021086\|Ga0179596_10110213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300021168\|Ga0210406_10043336	All Organisms → cellular organisms → Bacteria	3978	Open in IMG/M
3300021168\|Ga0210406_10057632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3378	Open in IMG/M
3300025910\|Ga0207684_10759258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300025910\|Ga0207684_10920129	Not Available	734	Open in IMG/M
3300025910\|Ga0207684_11666737	Not Available	515	Open in IMG/M
3300025922\|Ga0207646_10446590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300025922\|Ga0207646_11454451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300025939\|Ga0207665_10139661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1726	Open in IMG/M
3300026095\|Ga0207676_11922985	Not Available	590	Open in IMG/M
3300026331\|Ga0209267_1019610	All Organisms → cellular organisms → Bacteria	3420	Open in IMG/M
3300026331\|Ga0209267_1021044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3272	Open in IMG/M
3300026334\|Ga0209377_1262786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300026358\|Ga0257166_1013036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300026469\|Ga0257169_1071039	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300026497\|Ga0257164_1036558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300026528\|Ga0209378_1018802	All Organisms → cellular organisms → Bacteria	3902	Open in IMG/M
3300026538\|Ga0209056_10096177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2434	Open in IMG/M
3300026538\|Ga0209056_10257723	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300026540\|Ga0209376_1209231	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300027643\|Ga0209076_1003382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3604	Open in IMG/M
3300027651\|Ga0209217_1000991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8771	Open in IMG/M
3300027651\|Ga0209217_1004069	All Organisms → cellular organisms → Bacteria	4879	Open in IMG/M
3300027748\|Ga0209689_1299136	Not Available	624	Open in IMG/M
3300027842\|Ga0209580_10064323	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300027846\|Ga0209180_10232614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300027846\|Ga0209180_10423769	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300027875\|Ga0209283_10953166	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300027894\|Ga0209068_10199434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300027910\|Ga0209583_10007343	All Organisms → cellular organisms → Bacteria	3171	Open in IMG/M
3300028379\|Ga0268266_10000583	All Organisms → cellular organisms → Bacteria	50513	Open in IMG/M
3300028381\|Ga0268264_11240136	Not Available	755	Open in IMG/M
3300028536\|Ga0137415_10000151	All Organisms → cellular organisms → Bacteria	57375	Open in IMG/M
3300031720\|Ga0307469_10035639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2955	Open in IMG/M
3300031720\|Ga0307469_12452035	Not Available	509	Open in IMG/M
3300031910\|Ga0306923_11035853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300031962\|Ga0307479_10015069	All Organisms → cellular organisms → Bacteria	7253	Open in IMG/M
3300031962\|Ga0307479_10256844	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300032180\|Ga0307471_100023524	All Organisms → cellular organisms → Bacteria → Acidobacteria	4580	Open in IMG/M
3300032180\|Ga0307471_100114356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2493	Open in IMG/M
3300032205\|Ga0307472_100191971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300032205\|Ga0307472_100341392	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300032205\|Ga0307472_100636101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300032205\|Ga0307472_101045392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300032261\|Ga0306920_100074735	All Organisms → cellular organisms → Bacteria	4971	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.12%
Host-Associated	Host-Associated	9.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.95%
Plants	Host-Associated → Plants	9.88%
Aquatic	Environmental → Aquatic	6.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.17%
Sediment	Environmental → Aquatic → Sediment	5.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Freshwater	Environmental → Aquatic → Freshwater	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.52%
Loam	Environmental → Terrestrial → Soil → Loam	14.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.23%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1060005972	3300000559	Soil	MRTPMHWRTERGRHFQAHPLQATFSLIASMLLAALVVLALVLSAK*
JGIcombinedJ26739_1000858083	3300002245	Forest Soil	MRTPMPWRTERGRYFHAHPQQAMFSLIASLLLAGLVVLALALSAR*
Ga0066680_105760323	3300005174	Soil	AAMHTPMHWRTERGRYFQGHPLHATFSLIASMLLAGLVVL*
Ga0066678_101402482	3300005181	Soil	MHTPMHWRTERGRYFQTHPLHATFSLVASMLLAGLVVLVLVLSAR*
Ga0066388_1002602595	3300005332	Tropical Forest Soil	MRTPMHWRTERGRHLQAHPLHTTFSLIASMLLAGLLVLAFVLSAR*
Ga0066388_1006680654	3300005332	Tropical Forest Soil	MRNPMLWRREQGRYFHAHPQQAMFSLIASMLLAGLVVLALALSAR*
Ga0066388_1023813501	3300005332	Tropical Forest Soil	MWTPMHWRTERGRHLQTHSLHTTFSLVASMMLAGLLVLAFVLSA
Ga0068869_1000532442	3300005334	Miscanthus Rhizosphere	MRTLTERGRHFHAHPLQATFSPIASMLLAALVVLALVLSAR*
Ga0070661_1001822261	3300005344	Corn Rhizosphere	MWTLMHWRTERGRYVQTHPLQATFSLIASMLLAALVVLALVLSAK*
Ga0070713_1006086541	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRTPMHWRTEGGRHFQTHPLHATFSLVASMLLAGLVVLALALSAR*
Ga0070705_1006707301	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRTPMHWRTERGRYFHAHPQQAMFSLIASIVLAGLVVLALALSAR*
Ga0070708_1018253921	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TLTERGRYFHAHPLQVAFSLIASTLLAGLVVLALVLSVR*
Ga0070706_1000579204	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHTPMHWRTERGRYFHAHPLHAAFSLIASMLLAGLIVLVLVLSAK*
Ga0070707_1007858293	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MHTPMHWRTERGRYFQAHPLHAAFSLVASMLLAGLIVLVLVLSAK*
Ga0070707_1009801661	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRTPMHWRTERDRHFQAHPLQATFSLIASLLLAALVVLALVFSAR*
Ga0066697_100841724	3300005540	Soil	MHTPMHWRTERGRYFQGHPLHATFSLIASMLLAGLVVLALVLSAK*
Ga0066701_101117243	3300005552	Soil	MHTPIHWRTERGRYLQAHPLHATFSLIASMLLAGLVVLVLVLSAR*
Ga0066661_100071084	3300005554	Soil	MRTPMHWRTERGRHFQAHPLHATYSLVASMLLAGLVVLALVLSAR*
Ga0066707_101006512	3300005556	Soil	MHTPMHWRTERGRYFQTHPLHATFSLVASMLLAGLVVLVLVMSAR*
Ga0066704_100559073	3300005557	Soil	MHTPIHWRTERGRYFQAYPLHATFSLIASMLLAGLVVLVLVLSAR*
Ga0066703_100376486	3300005568	Soil	MHTPIHWRTERGRYFQAYPLHATFSLIASMLLAGLAVLVLVLSAR*
Ga0066705_100562132	3300005569	Soil	MHTPIHWRTERGRYFQAYPLHATFSLIASMLLAGLVVLVLVLSSR*
Ga0066903_1048844701	3300005764	Tropical Forest Soil	MRNPMLWRREQGRYFHAHPQQAMFSLIASMLLAGLVMLALALSAR*
Ga0066903_1068992792	3300005764	Tropical Forest Soil	MWTPMHWRTERGRHLQTHSLHTTFSLVASMMLAGLLVLAFVLSAR*
Ga0068858_1005152161	3300005842	Switchgrass Rhizosphere	MWTPMHWRTERGRYVQTHPLQATFSLIASMLLAALVVLALVLSAK*
Ga0068860_1004186631	3300005843	Switchgrass Rhizosphere	MHWRTERGRYVQTHPLQATFSLIASMLLAALVVLALVLSAK*
Ga0066656_101117101	3300006034	Soil	MHTPMHWRTERGRYFQGHPLHATFSLIASMLLAGLVV
Ga0075024_1002000143	3300006047	Watersheds	MRTLTERGHYFHAHPLQATFSLIASMLLAGLAVLALVLSAQ*
Ga0075028_1001000853	3300006050	Watersheds	MQTLTERGRHFQAHPLQATFSLIASMLLAALVVLALVLSAR*
Ga0075028_1002337831	3300006050	Watersheds	MRTLTERGRHFQTHPLQTTFSLVASILLAALVVLVLVLSAR*
Ga0075017_1000070153	3300006059	Watersheds	MRTLMPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR*
Ga0075017_1000548663	3300006059	Watersheds	VRMMCWRTEPRHHFQAPPAQVTFSLIASMLLAGLVVLALALSAQ*
Ga0075017_1004909022	3300006059	Watersheds	MRTLTERGRHFQAHPLQATFSLIASMLLAALVVLALVLSAR*
Ga0075018_102505721	3300006172	Watersheds	PVLLGRRLAMRTLTERGRHFQTHPLQTTFSLVASILLAALVVLVLVLSAR*
Ga0070716_1000382821	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLMHFRTHRDRYFHAHPLHGTFSLIASRALAGLVVLMLVLSAR*
Ga0070712_1000099101	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ERGRHFQAHPLQATFSLFASMLLAGLVVLALVLSAR*
Ga0070712_1000326361	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLTERGRHFQAHPLQATFSLFASMLLAGLVVLALVLS
Ga0066653_105016082	3300006791	Soil	MRTPMHWRTERGRHFQAHPLQATFSLIASMLLAALVVLALVLSAR*
Ga0066665_101859191	3300006796	Soil	MRTPMHWRTERGRHFQAHPLHGTFSLIASMLLAGLLVLAFVLSAR*
Ga0066665_111052192	3300006796	Soil	MRTPMHWRTERGRHFQAHPLQAMFSLIASMLLAALVVLALVLSAK*
Ga0066659_106146141	3300006797	Soil	TERGRYFQAYPLHATFSLIASMLLAGLVVLVLVLSAR*
Ga0079221_105582452	3300006804	Agricultural Soil	MHTPMHWRTERGRYFQAHPLHTTFSLIASMLLAGLVVLVLVLSAR*
Ga0075433_103176791	3300006852	Populus Rhizosphere	ERGRHFQAHPLQATFSLVATMLLAALVVLALVLSAR*
Ga0075433_109051292	3300006852	Populus Rhizosphere	MPTPMHWRTERGRHFHTHPLHATFSLIASVLLAGLIVLVLVLSAR*
Ga0075425_1028715262	3300006854	Populus Rhizosphere	EEAAMRTPMHWRTERGRYFHAHPQQAMFSLIASIVLAGLVVLALALSAR*
Ga0075434_1008536673	3300006871	Populus Rhizosphere	MRTPMHWRTERGRYFHAHPQQAMFSLIASIVLAGLVVLALALSA
Ga0075435_1016856302	3300007076	Populus Rhizosphere	MRTLMHWRMERERHFQSHPLHTTYSLIASMLLTGLL
Ga0066710_1026859771	3300009012	Grasslands Soil	MHTPMHWRTERGRYFQGHPLHATFSLIASMLLAGLVVL
Ga0099829_100328588	3300009038	Vadose Zone Soil	MRTLTERGRHFQAHPLQATFSLVASMLLAGLVVLALVLSAR*
Ga0099829_100515873	3300009038	Vadose Zone Soil	MRTLTERGRHFQAHPLQATFSLIASMLLAALVVLALVLAAR*
Ga0099829_100556365	3300009038	Vadose Zone Soil	MRTAMHWRTERGRHFQTHPLQATFSLVVSMLLAGLVVLALVLSAR*
Ga0099829_102516182	3300009038	Vadose Zone Soil	MHTAMHWRTERGRYFQTHPLHATFSLIASMLLAGLVVLVLVLSAR*
Ga0099829_103824151	3300009038	Vadose Zone Soil	MHWRTERGRYFQAHPLQATFSLIASMLLAALVVLALVLSAK*
Ga0099830_100272138	3300009088	Vadose Zone Soil	MRTLTERGRHFQAHPLQATFSLFASMLLAGLVVPALVLSAR*
Ga0099830_102214293	3300009088	Vadose Zone Soil	MRTMMPWRTERGRYFHAHPQQAMFSLIASMLLAAL
Ga0099830_103693751	3300009088	Vadose Zone Soil	EAAMRTSMHWRTERGRHFQSHPLHAAFSVIASMLLAGLVVLVLVLSVR*
Ga0099828_105761711	3300009089	Vadose Zone Soil	MHWRAERGRHFQAHPLQATFSLIASMLLAALVVLALVLS
Ga0099828_107321842	3300009089	Vadose Zone Soil	MRTPMHWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR*
Ga0099828_116869772	3300009089	Vadose Zone Soil	MPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR*
Ga0099827_106077292	3300009090	Vadose Zone Soil	MHTPMHWRTERGRYFQAHPLHATFSLIASMLLAGLVVLVLVLSAR*
Ga0066709_1000751115	3300009137	Grasslands Soil	MRTPMHWRTERGRHFQAHPLHATFSLIASMLLAGLLVLAFVLSAR*
Ga0099792_111512021	3300009143	Vadose Zone Soil	MRTLTERGRHFQAHPLQATFSLTAGMLLAALIVLALVLSAR
Ga0126373_100945323	3300010048	Tropical Forest Soil	MRALTHSSTERGRHFQGHPLHATFSLIASMLLAGLLVLAFVLSAR*
Ga0126373_122744401	3300010048	Tropical Forest Soil	MRALTHSSTERSHFQGHPLHATFSLIASMLLAGLLVLAFVLSAR*
Ga0126370_109326011	3300010358	Tropical Forest Soil	GGRLPMWTPMHWRTERGRHLQAHPLHTSFSLIASMLLAGLLVLAFVLSAR*
Ga0126370_117646391	3300010358	Tropical Forest Soil	MHTPMHWRTERGRYFQAHPLHAAFSLVASMLLAGLVVLVLVLSAK*
Ga0134128_100679206	3300010373	Terrestrial Soil	MRTLTKRGRHFHAHPLQATFSPIASMLLAALVVLALVLSAR*
Ga0137392_109554511	3300011269	Vadose Zone Soil	MRTPMPWRTERGRYFHAHPQQAMFSLIASVLLAALVVLALALSAR*
Ga0137392_114549471	3300011269	Vadose Zone Soil	MRTLMPWRTERGRYFHAHPQQAMFSLIASMLLAGLVVLALALSAR*
Ga0137391_101960721	3300011270	Vadose Zone Soil	MRTMMPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR*
Ga0137393_104935981	3300011271	Vadose Zone Soil	MRHLMPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR*
Ga0137389_100140051	3300012096	Vadose Zone Soil	WRTERGRYFQAHPLQATFSLIASILLAGLVVVALVLTAR*
Ga0137389_105367841	3300012096	Vadose Zone Soil	MRTSMHWRTERGRHFQSHPLHAAFSVIASMLLAGLVVLVLVLSVR*
Ga0137389_106692653	3300012096	Vadose Zone Soil	MRTLMPWRTERGRYFHVHPQQAMFSLLASMLLAGMVVLALALS
Ga0137388_104707491	3300012189	Vadose Zone Soil	ERGRHFQSHPLHAAFSVIASMLLAGLVVLVLVLSVR*
Ga0137388_105498422	3300012189	Vadose Zone Soil	MRTLTERGRYFHAHPLQVAFSLIASTLLAGLVVVALVLSVR*
Ga0137388_105698362	3300012189	Vadose Zone Soil	MRTLTERGRHFQAHPLQATFSLIASMLLAGLVVVALVLSAR*
Ga0137388_116448821	3300012189	Vadose Zone Soil	MRTLMPWRTERGRYFHAHPQQAMFSLIASVLLAALVVLALALSAR*
Ga0137388_119007011	3300012189	Vadose Zone Soil	VCSEAATMRHLMPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR*
Ga0137383_108655222	3300012199	Vadose Zone Soil	MRIPMHWRTERGRHFQAHSLHATFSLIASMLLAGLLVLAFVLSAR*
Ga0137363_100026597	3300012202	Vadose Zone Soil	MRTPMHWRTERGRHFQAHPLHATFSLVASMLLAGLVILALVLSAR*
Ga0137363_102665412	3300012202	Vadose Zone Soil	MRTMMPWRTERGRYFHAHPQQAMFSLIASVLLAALVVSALALSAR*
Ga0137363_105903841	3300012202	Vadose Zone Soil	MRTLTERGRHFQAHPSQATFSLFASMLLAGLVVPALVLSAR*
Ga0137362_100672444	3300012205	Vadose Zone Soil	MRTLTERGRHFQTHPLQATFSLIASILLAGLVVVALVLTAR*
Ga0137362_114530842	3300012205	Vadose Zone Soil	MPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALS
Ga0137379_104426051	3300012209	Vadose Zone Soil	MRTLTERGRHFQAHPLQATFSLFASMLLAGLVVLALVLSAR*
Ga0137386_100808944	3300012351	Vadose Zone Soil	MRTPMHWRTERGRHFQARPLHATFSLIASMLLAGLLVLAFVLSAR*
Ga0137371_105386992	3300012356	Vadose Zone Soil	MYTPMHWRTERGRYFQAHPLHATFSLITSMLLAGLVVLVLVLSAK*
Ga0137385_102486524	3300012359	Vadose Zone Soil	MHTPIHWRTERGRYLQAHPLHATFSLIASMLLAGLVVLVLILSAR*
Ga0137360_100012353	3300012361	Vadose Zone Soil	MRTPMHWRTERGRHFQAHPLHATFSLVSSMLLAGLVILALVLSAR*
Ga0137360_117888422	3300012361	Vadose Zone Soil	GRYFQAHPLQATFSLIASMLLAALVVLALVLSAK*
Ga0137361_110270481	3300012362	Vadose Zone Soil	MRSLTERGRHFQAHSLQATFSLFASMLLAGLVVLALVLSAR*
Ga0137395_104029392	3300012917	Vadose Zone Soil	MRTPMPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR*
Ga0137395_112163182	3300012917	Vadose Zone Soil	MHTAMHWRTERGLYFQTHPPHATFSLIASMLLGGLVVLVLVLSER*
Ga0137404_110185421	3300012929	Vadose Zone Soil	QEEAAMRTPMHWRTERGRHFQAHPLQATWSLIASMLLAALVVLALVSSVR*
Ga0137407_101257933	3300012930	Vadose Zone Soil	MHTPMHWRTERGRYFQAHPLHATFSLVASMLLAGLVVLVLVLSAR*
Ga0137407_109661582	3300012930	Vadose Zone Soil	MHTPIHWRTERGRYFQAHPLHATFSLITSMLLAGLVVLVLVLSAK*
Ga0137407_109983441	3300012930	Vadose Zone Soil	MRTPMHWRTERGRHFQAHPLQATWSLIASMLLAALVVLALVSSVR*
Ga0137407_113094231	3300012930	Vadose Zone Soil	MRTLMPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSA
Ga0137407_119285511	3300012930	Vadose Zone Soil	AAMHTPMHWRTERGGYFQGHPLHATFSLIASMLLAGLVVLALVLSAR*
Ga0137410_105786002	3300012944	Vadose Zone Soil	MRTLTERGRHFQAHPLQATFSLFASMLLAGLVVLA
Ga0137410_107139491	3300012944	Vadose Zone Soil	MRTLIHLRAERGRHFQAHPLQATFSLMASMLLAALVVLALVLSAK*
Ga0157374_106726632	3300013296	Miscanthus Rhizosphere	AAMRTLTERGRHFHAHPLQATFSPIASMLLAALVVLALVLSAR*
Ga0157378_106901212	3300013297	Miscanthus Rhizosphere	MRTLTERGRHFHAHPLQATFSLFASMLLAGLVVPALVLSAR*
Ga0157376_103662122	3300014969	Miscanthus Rhizosphere	MWTLMHWRTERGRYVQTHPLQATFSLIASMLLAALVVLALVLS
Ga0137403_108324221	3300015264	Vadose Zone Soil	REEAAMHTPMHWMTERGRYFQGHPLHATFSLIASMLLAGLVVLALVLSAK*
Ga0132257_1002652973	3300015373	Arabidopsis Rhizosphere	MRHLMPWRTERGRYFHAHPQQAMFSLIASIVLAGLVVLALALSAR*
Ga0182036_104954751	3300016270	Soil	MRTPMHWRAERGRHFHAHPLHATFSLIASMLLAGLLVLAFV
Ga0182041_115278642	3300016294	Soil	MRTPMHWRAERGRHFHAHPLHATFSLIASMLLAGLLVLAFVLS
Ga0182041_118403412	3300016294	Soil	MWSLTERGRYFHAHPLHATFSLMASMLLAGLVVLA
Ga0182040_104409952	3300016387	Soil	PMHWRAERGRHFHAHPLHATFSLIASMLLAGLLVLAFVLSAR
Ga0134083_103835901	3300017659	Grasslands Soil	MPTPMHWRIERGRHFQGHPLHATFSLIASMLLVGLLVLVLVLSAR
Ga0187819_103633541	3300017943	Freshwater Sediment	RTHEERRFHLHPLHGTFSLVTSFFLAGLVVLALVL
Ga0187771_100288572	3300018088	Tropical Peatland	MRTLKYFRTHHDPYFHAHPLHATFALIASFLLAAVVVLVLVSSAR
Ga0066655_102237662	3300018431	Grasslands Soil	MHTPIHWRTERGRYLQAHPLHATFSLIASMLLAGLVVLVLVLSAR
Ga0066667_101379762	3300018433	Grasslands Soil	MHTPMHWRTERGRYFQGHPLHATFSLIASMLLAGLVVLALVLSAK
Ga0137408_10302142	3300019789	Vadose Zone Soil	MHTAMHWRTERGRYFQTHPLHATFSLIASMLLAGLVVLVLVLSAR
Ga0179596_101102133	3300021086	Vadose Zone Soil	MRTLTERGRHFQAHPLQATFSLIASMLLAALVVLALVLSAR
Ga0210406_100433367	3300021168	Soil	MWSLTERGRYFHAHPLHATFSLMASMLLAGLVVLAFVLSAR
Ga0210406_100576322	3300021168	Soil	MWSLTERGRHFHAHPLHATFSLMASMLLAGLVVLAFVLSAR
Ga0207684_107592581	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LIHWRLERERHFQAHPLHTTYSLIASMLLTGLLVLAFVLSAK
Ga0207684_109201292	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MHTPMHWRTERGRYFHAHPLHAAFSLIASMLLAGLIVLVLVLSAK
Ga0207684_116667371	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRSMMHWRMERGRYFHAHPQHAAYSLIASAMLAGLLVLVFVLSAR
Ga0207646_104465902	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRTAMHWRTERGRHFQTHPLQATFSLVVSMLLAGLVVLALVLSAR
Ga0207646_114544512	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHTPMHWRTERGRYFQAHPLHAAFSLVASMLLAGLIVLVLVLSA
Ga0207665_101396611	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MHTPMHWRTERGRYFQAHPLHTTFSLIASMLLAGLVVLVLVLSAR
Ga0207676_119229851	3300026095	Switchgrass Rhizosphere	RGRYVQTHPLQATFSLIASMLLAALVVLALVLSAK
Ga0209267_10196103	3300026331	Soil	MRTPMHWRTERGRHFQAHPLHATYSLVASMLLAGLVVLALVLSAR
Ga0209267_10210444	3300026331	Soil	MHTPIHWRTERGRYFQAYPLHATFSLIASMLLAGLVVLVLVLSAR
Ga0209377_12627861	3300026334	Soil	MHTPIHWRTERGRYLQAHPLHATFSLIASMLLAGLVVLVL
Ga0257166_10130362	3300026358	Soil	MRTLTERGRHFQAHPLQATFSLVASMLLAGLVVLALVLSAR
Ga0257169_10710392	3300026469	Soil	MRTLMPWRTERGRYFHAHPQQAMFSLIASMLLAGLV
Ga0257164_10365581	3300026497	Soil	TERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR
Ga0209378_10188022	3300026528	Soil	MHTPMHWRTERGRYFQTHPLHATFSLVASMLLAGLVVLVLVMSAR
Ga0209056_100961772	3300026538	Soil	MHTPIHWRTERGRYFQAYPLHATFSLIASMLLAGLVVLVLVLSSR
Ga0209056_102577231	3300026538	Soil	MRHLMPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR
Ga0209376_12092312	3300026540	Soil	DWIGREEAAMHTPMHWRTERGRYFQGHPLHATFSLIASMLLVGLLVLVLVLSAR
Ga0209076_10033827	3300027643	Vadose Zone Soil	MRTPMHWRTERGRHFQAHPLHATFSLVASMLLAGLVVLALVLSAR
Ga0209217_10009919	3300027651	Forest Soil	MRTPMPWRTERGRYFHAHPQQAMFSLIASLLLAGLVVLALALSAR
Ga0209217_10040696	3300027651	Forest Soil	MRMHWRTERGRYFHAHPSHATFSLIARMLLAGLVVLALVLSPR
Ga0209689_12991361	3300027748	Soil	MHTAMHWRTERGRYFQTHPLHATFSLIASMLLAGLVVLALVLSAR
Ga0209580_100643232	3300027842	Surface Soil	MRTLMHFRTHRDRYFHAHPLHGTFSLIASLALAGLVVLMLVLSAR
Ga0209180_102326141	3300027846	Vadose Zone Soil	LMPWRTERGRYFHAHPQQAMFSLIASVLLAGLVVLALALSAR
Ga0209180_104237691	3300027846	Vadose Zone Soil	MRTLMPWRTERGRYFHAHPQQAMFSLIASMLLAGLVVLAL
Ga0209283_109531661	3300027875	Vadose Zone Soil	MRTPMHWRAERGRHFQAHPLQATFSLIASMLLAALVVLALVLS
Ga0209068_101994342	3300027894	Watersheds	LTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR
Ga0209583_100073431	3300027910	Watersheds	GRLAMRILADRGRYFYAHPLHATVSLIANTLLAGLIVLVLVLSAR
Ga0268266_100005837	3300028379	Switchgrass Rhizosphere	MWTLMHWRTERGRYVQTHPLQATFSLIASMLLAALVVLALVLSAK
Ga0268264_112401361	3300028381	Switchgrass Rhizosphere	EEAAMWTLMHWRTERGRYVQTHPLQATFSLIASMLLAALVVLALVLSAK
Ga0137415_100001518	3300028536	Vadose Zone Soil	MRTPMHWRTERGRHFQAQPLHAMFSLVASMLLAGLVILALVLSAR
Ga0307469_100356393	3300031720	Hardwood Forest Soil	MRTLTERGRHFQARPLQATFSLIASMLLAGLVVVALVLSAR
Ga0307469_124520351	3300031720	Hardwood Forest Soil	YDWVVREEAAMRTPMHWRTERGRYFHAHPQQAMFSLIASIVLAGLVVLALALSAR
Ga0306923_110358532	3300031910	Soil	MRTPMHWRAERGRHFHAHPLHATFSLIASMLLAGLLVLAFVLSAR
Ga0307479_100150699	3300031962	Hardwood Forest Soil	MRTLTERGRHFHAHPLHATFSLIASMLLAALVVLALVLSAR
Ga0307479_102568442	3300031962	Hardwood Forest Soil	VRTLTPWRTERGRYFHAHPQQAMFSLIASMLLAALVVLALALSAR
Ga0307471_1000235244	3300032180	Hardwood Forest Soil	MRTLMPWRTERGRYFHAHPQQAMFSLIASMLLAGLVVLALALSAR
Ga0307471_1001143563	3300032180	Hardwood Forest Soil	MRTLTERGRHFHAHPLQATFSLIASMLLAALLVLALVLSAR
Ga0307472_1001919711	3300032205	Hardwood Forest Soil	DWVGQEEAAMRTPMHWRTERGRHFQVYPLHATYSLVASMLLAGLVVLALVLSAR
Ga0307472_1003413922	3300032205	Hardwood Forest Soil	MHTPMHWRTERGRYFHAHPLHATFSLIASMLLAGLVVLVLVLSAR
Ga0307472_1006361012	3300032205	Hardwood Forest Soil	MHTAIHWRTERGRYFQAHPLHAAFSLVASMLLAGLIVLVLVLSAK
Ga0307472_1010453921	3300032205	Hardwood Forest Soil	MRTLTERGRYFQAHPLQVAFSLIASTLLAGLVVLALVLSAR
Ga0306920_1000747353	3300032261	Soil	MRALTHSSTERGRHFQGHPLHATFSLIASMLLAGLLVLAFVLSAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040310

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences