NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F040309

Metagenome / Metatranscriptome Family F040309

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F040309
Family Type Metagenome / Metatranscriptome
Number of Sequences 162
Average Sequence Length 47 residues
Representative Sequence TSYEGALMSDGSVPEAARAFIRFLANPEARAKWVAARLEPLAER
Number of Associated Samples 139
Number of Associated Scaffolds 162

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.32 %
% of genes near scaffold ends (potentially truncated) 92.59 %
% of genes from short scaffolds (< 2000 bps) 91.98 %
Associated GOLD sequencing projects 135
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.802 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(24.074 % of family members)
Environment Ontology (ENVO) Unclassified
(27.160 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.210 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 162 Family Scaffolds
PF00583Acetyltransf_1 14.20
PF01970TctA 11.73
PF00528BPD_transp_1 8.64
PF03797Autotransporter 6.79
PF13531SBP_bac_11 2.47
PF00582Usp 1.85
PF13533Biotin_lipoyl_2 1.85
PF12698ABC2_membrane_3 1.85
PF00005ABC_tran 1.23
PF11742DUF3302 1.23
PF04613LpxD 0.62
PF01070FMN_dh 0.62
PF13505OMP_b-brl 0.62
PF02786CPSase_L_D2 0.62
PF02417Chromate_transp 0.62
PF01594AI-2E_transport 0.62
PF01061ABC2_membrane 0.62
PF11453DUF2950 0.62
PF02743dCache_1 0.62
PF03551PadR 0.62
PF00293NUDIX 0.62
PF00364Biotin_lipoyl 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 162 Family Scaffolds
COG1784TctA family transporterGeneral function prediction only [R] 11.73
COG3333TctA family transporterGeneral function prediction only [R] 11.73
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 0.62
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.62
COG1044UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferaseCell wall/membrane/envelope biogenesis [M] 0.62
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 0.62
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.62
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.62
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.62
COG2059Chromate transport protein ChrAInorganic ion transport and metabolism [P] 0.62
COG2972Sensor histidine kinase YesMSignal transduction mechanisms [T] 0.62


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.42 %
UnclassifiedrootN/A13.58 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352025|deepsgr__Contig_188680All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium843Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0746995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1003Open in IMG/M
3300001991|JGI24743J22301_10004697All Organisms → cellular organisms → Bacteria → Proteobacteria2240Open in IMG/M
3300003911|JGI25405J52794_10161142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium513Open in IMG/M
3300004152|Ga0062386_101102124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales659Open in IMG/M
3300005180|Ga0066685_10676065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium709Open in IMG/M
3300005332|Ga0066388_101342206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1237Open in IMG/M
3300005332|Ga0066388_103780594All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales772Open in IMG/M
3300005332|Ga0066388_104610788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales701Open in IMG/M
3300005353|Ga0070669_100781502All Organisms → cellular organisms → Bacteria → Proteobacteria810Open in IMG/M
3300005364|Ga0070673_101815850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium578Open in IMG/M
3300005366|Ga0070659_100264171All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1428Open in IMG/M
3300005439|Ga0070711_101921101All Organisms → cellular organisms → Bacteria → Proteobacteria520Open in IMG/M
3300005440|Ga0070705_100637673All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales829Open in IMG/M
3300005555|Ga0066692_11021234All Organisms → cellular organisms → Bacteria → Proteobacteria506Open in IMG/M
3300005564|Ga0070664_101932864All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli560Open in IMG/M
3300005713|Ga0066905_102041261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria533Open in IMG/M
3300005764|Ga0066903_100191668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3038Open in IMG/M
3300005764|Ga0066903_103580490All Organisms → cellular organisms → Bacteria → Proteobacteria837Open in IMG/M
3300005764|Ga0066903_104467611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium746Open in IMG/M
3300005764|Ga0066903_105924902All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium641Open in IMG/M
3300005764|Ga0066903_107849688All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales548Open in IMG/M
3300006172|Ga0075018_10267233Not Available833Open in IMG/M
3300006580|Ga0074049_10086106All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300006581|Ga0074048_10120637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium660Open in IMG/M
3300006935|Ga0081246_1369534All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales640Open in IMG/M
3300007265|Ga0099794_10730610All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium528Open in IMG/M
3300009038|Ga0099829_11004105Not Available692Open in IMG/M
3300009088|Ga0099830_10240190All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300009094|Ga0111539_11806955Not Available709Open in IMG/M
3300009100|Ga0075418_12719843Not Available540Open in IMG/M
3300009156|Ga0111538_10735890All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1249Open in IMG/M
3300009553|Ga0105249_11385824Not Available775Open in IMG/M
3300009792|Ga0126374_11300230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria587Open in IMG/M
3300010036|Ga0126305_10586114All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300010043|Ga0126380_10437766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium984Open in IMG/M
3300010046|Ga0126384_11101564All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium728Open in IMG/M
3300010046|Ga0126384_11479178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium636Open in IMG/M
3300010047|Ga0126382_10746506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria827Open in IMG/M
3300010359|Ga0126376_10639037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71013Open in IMG/M
3300010359|Ga0126376_12832613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium535Open in IMG/M
3300010361|Ga0126378_10221565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis1975Open in IMG/M
3300010364|Ga0134066_10427928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium512Open in IMG/M
3300010366|Ga0126379_13586956All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria520Open in IMG/M
3300010371|Ga0134125_10445844All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300010373|Ga0134128_12143846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium616Open in IMG/M
3300010398|Ga0126383_12257350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium630Open in IMG/M
3300010403|Ga0134123_10603441Not Available1055Open in IMG/M
3300010868|Ga0124844_1130252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.958Open in IMG/M
3300011119|Ga0105246_11270565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium681Open in IMG/M
3300012096|Ga0137389_10685013All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300012201|Ga0137365_10039019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3627Open in IMG/M
3300012201|Ga0137365_11213514All Organisms → cellular organisms → Bacteria → Proteobacteria539Open in IMG/M
3300012203|Ga0137399_10887420Not Available751Open in IMG/M
3300012209|Ga0137379_11505728All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300012360|Ga0137375_10269940All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1558Open in IMG/M
3300012361|Ga0137360_10632263All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300012469|Ga0150984_122158824All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300012683|Ga0137398_10931878All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium604Open in IMG/M
3300012948|Ga0126375_10035537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2523Open in IMG/M
3300012955|Ga0164298_10615104Not Available748Open in IMG/M
3300012971|Ga0126369_10432742All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300012971|Ga0126369_11549965All Organisms → cellular organisms → Bacteria → Proteobacteria752Open in IMG/M
3300012971|Ga0126369_12783378All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria572Open in IMG/M
3300012988|Ga0164306_11119525All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300012988|Ga0164306_11237081Not Available628Open in IMG/M
3300014325|Ga0163163_12994044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium527Open in IMG/M
3300014326|Ga0157380_12403913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium592Open in IMG/M
3300014969|Ga0157376_11206548All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300015372|Ga0132256_103722400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium513Open in IMG/M
3300016270|Ga0182036_10926342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7715Open in IMG/M
3300016294|Ga0182041_10881506Not Available804Open in IMG/M
3300016371|Ga0182034_11877850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria528Open in IMG/M
3300017792|Ga0163161_10226935Not Available1448Open in IMG/M
3300017792|Ga0163161_11085509All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300018081|Ga0184625_10666556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium502Open in IMG/M
3300018468|Ga0066662_11986282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium609Open in IMG/M
3300018482|Ga0066669_10287908All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae1325Open in IMG/M
3300020002|Ga0193730_1113490All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300020579|Ga0210407_10194727All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae1574Open in IMG/M
3300021560|Ga0126371_10807722All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1084Open in IMG/M
3300021560|Ga0126371_12276460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium654Open in IMG/M
3300021560|Ga0126371_13856919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria505Open in IMG/M
3300022694|Ga0222623_10194462Not Available787Open in IMG/M
3300022756|Ga0222622_10479794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium886Open in IMG/M
3300024288|Ga0179589_10212336Not Available850Open in IMG/M
3300025900|Ga0207710_10099353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1370Open in IMG/M
3300025932|Ga0207690_11595087All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium545Open in IMG/M
3300025945|Ga0207679_11106432All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria727Open in IMG/M
3300026035|Ga0207703_10574563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1064Open in IMG/M
3300026067|Ga0207678_10837701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria812Open in IMG/M
3300026277|Ga0209350_1016131All Organisms → cellular organisms → Bacteria → Proteobacteria2340Open in IMG/M
3300026555|Ga0179593_1137690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2428Open in IMG/M
3300027583|Ga0209527_1025298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1321Open in IMG/M
3300027603|Ga0209331_1004106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4118Open in IMG/M
3300027812|Ga0209656_10212002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria933Open in IMG/M
3300027862|Ga0209701_10106082All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus1751Open in IMG/M
3300027882|Ga0209590_10272478Not Available1083Open in IMG/M
3300027903|Ga0209488_10371447All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans1061Open in IMG/M
3300028710|Ga0307322_10037364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY11162Open in IMG/M
3300028720|Ga0307317_10271758All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans573Open in IMG/M
3300028722|Ga0307319_10048754Not Available1327Open in IMG/M
3300028768|Ga0307280_10312328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1575Open in IMG/M
3300028778|Ga0307288_10348030All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium596Open in IMG/M
3300028787|Ga0307323_10295460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1582Open in IMG/M
3300028793|Ga0307299_10339589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans563Open in IMG/M
3300028796|Ga0307287_10170367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans827Open in IMG/M
3300028824|Ga0307310_10209046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium924Open in IMG/M
3300028828|Ga0307312_10322235Not Available1008Open in IMG/M
3300028872|Ga0307314_10062697All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1956Open in IMG/M
3300028876|Ga0307286_10120309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1930Open in IMG/M
3300028885|Ga0307304_10113483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY11096Open in IMG/M
3300028885|Ga0307304_10264751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium751Open in IMG/M
3300031198|Ga0307500_10292050Not Available515Open in IMG/M
3300031232|Ga0302323_101884622Not Available678Open in IMG/M
3300031543|Ga0318516_10022479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3241Open in IMG/M
3300031547|Ga0310887_10434208All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300031549|Ga0318571_10400992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7535Open in IMG/M
3300031549|Ga0318571_10401390All Organisms → cellular organisms → Bacteria → Proteobacteria535Open in IMG/M
3300031573|Ga0310915_10089347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2063Open in IMG/M
3300031640|Ga0318555_10308632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7856Open in IMG/M
3300031747|Ga0318502_10068525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1908Open in IMG/M
3300031747|Ga0318502_10918481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria532Open in IMG/M
3300031748|Ga0318492_10314598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria816Open in IMG/M
3300031748|Ga0318492_10713783All Organisms → cellular organisms → Bacteria → Proteobacteria537Open in IMG/M
3300031751|Ga0318494_10114128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1500Open in IMG/M
3300031765|Ga0318554_10260619All Organisms → cellular organisms → Bacteria → Proteobacteria987Open in IMG/M
3300031779|Ga0318566_10389587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria686Open in IMG/M
3300031780|Ga0318508_1022157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1553Open in IMG/M
3300031780|Ga0318508_1227673All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria535Open in IMG/M
3300031793|Ga0318548_10002779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5876Open in IMG/M
3300031797|Ga0318550_10251462All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria857Open in IMG/M
3300031805|Ga0318497_10336266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria842Open in IMG/M
3300031820|Ga0307473_10686773Not Available717Open in IMG/M
3300031831|Ga0318564_10148572All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae1045Open in IMG/M
3300031835|Ga0318517_10555518All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300031859|Ga0318527_10189831All Organisms → cellular organisms → Bacteria → Proteobacteria868Open in IMG/M
3300031897|Ga0318520_11100979Not Available503Open in IMG/M
3300031910|Ga0306923_12009244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria586Open in IMG/M
3300031941|Ga0310912_11086818All Organisms → cellular organisms → Bacteria → Proteobacteria611Open in IMG/M
3300031942|Ga0310916_11300878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria598Open in IMG/M
3300031945|Ga0310913_10190020All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1432Open in IMG/M
3300031949|Ga0214473_11116923Not Available823Open in IMG/M
3300032041|Ga0318549_10163591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria993Open in IMG/M
3300032042|Ga0318545_10194913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria724Open in IMG/M
3300032043|Ga0318556_10028593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2571Open in IMG/M
3300032044|Ga0318558_10647061All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300032052|Ga0318506_10526423Not Available524Open in IMG/M
3300032055|Ga0318575_10021176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2728Open in IMG/M
3300032055|Ga0318575_10435695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria665Open in IMG/M
3300032059|Ga0318533_10003812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8354Open in IMG/M
3300032059|Ga0318533_10212446All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1389Open in IMG/M
3300032059|Ga0318533_11198895All Organisms → cellular organisms → Bacteria → Proteobacteria555Open in IMG/M
3300032060|Ga0318505_10287807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria775Open in IMG/M
3300032076|Ga0306924_11620039All Organisms → cellular organisms → Bacteria → Proteobacteria681Open in IMG/M
3300032091|Ga0318577_10389416All Organisms → cellular organisms → Bacteria → Proteobacteria666Open in IMG/M
3300032094|Ga0318540_10048121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1907Open in IMG/M
3300032261|Ga0306920_103247244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria607Open in IMG/M
3300033289|Ga0310914_10437212All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1184Open in IMG/M
3300034115|Ga0364945_0278344All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300034150|Ga0364933_180746All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium551Open in IMG/M
3300034354|Ga0364943_0287612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium620Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil24.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.73%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.49%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.85%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.85%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.23%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.23%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.23%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.23%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.62%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.62%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.62%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.62%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.62%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.62%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.62%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.62%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.62%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.62%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001991Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2Host-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006935Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A10 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deepsgr_032483202199352025SoilMGLYNLSEIPEGKGLKIAGPVPARCSSRPPTRALMSDGAVPEAAREFIRFLSEPEARAKWLAAKLEPRADH
ICChiseqgaiiDRAFT_074699513300000033SoilMGXYXVSEIPXGXGLAFAGXVPXXXQXXTSYEGAXMSDGXXPXAARAFIRFLAXPDARAK
JGI24743J22301_1000469743300001991Corn, Switchgrass And Miscanthus RhizospherePLQLATTYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
JGI25405J52794_1016114213300003911Tabebuia Heterophylla RhizosphereTTYEGGLMSDGAVPEAARAFIRFLASPDARPKWVAGKLEPLADH*
Ga0062386_10110212423300004152Bog Forest SoilISTSYEGALMSDGAEPEAARAFIRFLAGPDAHAQWLAARLEPLGDR*
Ga0066685_1067606513300005180SoilTTSYEGALMSDGAVPEAARAFIRFLASHDARAKWLAAKLEPSER*
Ga0066388_10134220633300005332Tropical Forest SoilKGLAFAGPVPALLQIATSYEGALMSDGSEPQAARAFIRFLANPDARAKWLAARLEPLADR
Ga0066388_10378059423300005332Tropical Forest SoilALAGPVPALLQVTTSYEGALMSDGSVPEAARAFIRFLANPEARTKWVAGRLEPLAER*
Ga0066388_10461078813300005332Tropical Forest SoilITTSYEGALMSDGSEPQAARAFIRFLANPDARAKWVAARLEPLTGR*
Ga0070669_10078150213300005353Switchgrass RhizosphereLKIAGPVPAPLQLATTYEGALMSDGAVPEASRAFIRFLTEPDARAKWIAAKLEPFADH*
Ga0070673_10181585013300005364Switchgrass RhizosphereQLATTYEGALMSDGAVPEAARAFIRFLAEPDARAKWIAAKLEPLADH*
Ga0070659_10026417133300005366Corn RhizosphereATTYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
Ga0070711_10192110123300005439Corn, Switchgrass And Miscanthus RhizosphereTTYEGALMSDGSVPQAARAFLRYLAEPEARPKWIAAKLEPAADH*
Ga0070705_10063767333300005440Corn, Switchgrass And Miscanthus RhizosphereLQLATTYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
Ga0066692_1102123413300005555SoilSDGAVPEAARAFIRFLASAEARDQWVAAKLEPLPGH*
Ga0070664_10193286423300005564Corn RhizosphereLTTTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAAKLEPLADH*
Ga0066905_10204126113300005713Tropical Forest SoilMSDGAVPEAARAFIRFLASPDARPKWVAAKLEPLADH*
Ga0066903_10019166863300005764Tropical Forest SoilVSEIPEGKGLAFAGRVPALLQVATSHEGALMHGSEPQAARAFTRFLANPEARAKWVAARLEPLAER*
Ga0066903_10358049013300005764Tropical Forest SoilLLQIKTSYEGALMSDGAVPEAARAFIRFLASPEAHGKWLAAKLEPSAGRR*
Ga0066903_10446761113300005764Tropical Forest SoilMSDGSVPEAVRAFLRFLASPEARARWTAAKLEPLSGR*
Ga0066903_10592490213300005764Tropical Forest SoilALMSDGSVPEAARAFIRFMTEPDARARWIAAKLEPLADH*
Ga0066903_10784968813300005764Tropical Forest SoilPVPTLLQIATSYEGAVMSDGSEPQAARAFIRFLANPEARVKWLAARLEPLAER*
Ga0075018_1026723323300006172WatershedsASAGTGTDASYEGALMSEGSAPQAARAFIQFLASEDARPHWLAAKLDPAER*
Ga0074049_1008610613300006580SoilEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
Ga0074048_1012063713300006581SoilLKIAGPVPAPLQLATTYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
Ga0081246_136953413300006935Tropical Rainforest SoilDGSEPQAARAFIRFLANPDARAKWVAARLEPLGDRR*
Ga0099794_1073061013300007265Vadose Zone SoilKHAGAVPAPLQISTTYEGALLSDGSVPEAVTAFIRFMAEPDARAKWIAAKLEPLLDH*
Ga0099829_1100410523300009038Vadose Zone SoilMMTDGAVPEAARALVRFSAGPEARAGWAAAKLEPLPDH*
Ga0099830_1024019023300009088Vadose Zone SoilMMTDGAVPETARAFVRFSAGPEARAGWAAAKLEPLPDH*
Ga0111539_1180695513300009094Populus RhizosphereTSYECALMSAGAVPEAARAFIRFLAGPDARAKWLAAKLEPSADH*
Ga0075418_1271984323300009100Populus RhizosphereSDGAVPEAARAFVRFLAGPDARAKWLAAKLEPSAEH*
Ga0111538_1073589033300009156Populus RhizospherePVPAPLQLTTTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAAKLEPLADH*
Ga0105249_1138582423300009553Switchgrass RhizosphereDGAVPEAARAFIRFLAGPDARAKWLAAKLEPSADH*
Ga0126374_1130023023300009792Tropical Forest SoilLMSDGSEPQAARAFIRFLANPEARAKWLAARLEPLAER*
Ga0126305_1058611413300010036Serpentine SoilPVPAPLQLATTYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
Ga0126380_1043776633300010043Tropical Forest SoilGDVTYEGGLMTDGSVPEAARAFVRFLAEPDARAKWLAIKFEPLADH*
Ga0126384_1110156413300010046Tropical Forest SoilLQIATSYEGALMSDGSEPQAARAFIRFLANPDAHAKWLAARLEPLAHR*
Ga0126384_1147917813300010046Tropical Forest SoilDGSEPQAARAFIRFLANPEARAKWLAARLEPLAER*
Ga0126382_1074650613300010047Tropical Forest SoilTSYEGALMSDGSVPEAARAFIRFLANPEARAKWVAARLEPLAER*
Ga0126376_1063903733300010359Tropical Forest SoilPVPTLLQIKTSYEGVLMSDGAVPEAARAFIRFLASPEARGKWLAAKLEPSPDR*
Ga0126376_1283261313300010359Tropical Forest SoilGLALAGPVPALLQIATSYEGALMSDGSEPQAARAFIRFLANPDAHAKWLAARLEPLAHR*
Ga0126378_1022156523300010361Tropical Forest SoilSDGAEPQAARAFIRFLANPEARAKWLAARLEPLAER*
Ga0134066_1042792813300010364Grasslands SoilDGAVPEAARAFIRFLASHDARAKWLAAKLEPSER*
Ga0126379_1358695613300010366Tropical Forest SoilGAEPQAARAFIRFLANPEARAKWVAAKLEPLAER*
Ga0134125_1044584413300010371Terrestrial SoilPLQLATTYEGALMSDGAVPEASRAFIRFLTEPDARAKWIAAKLEPFADH*
Ga0134128_1214384613300010373Terrestrial SoilGALMSDGAVPEAARAFIRFLAEPDARAKWIAAKLEPLADH*
Ga0126383_1225735013300010398Tropical Forest SoilGPVPALLQIATSYEGALMSDGSEPQAARAFIRFLANPDAHAKWLAARLEPLAHR*
Ga0134123_1060344133300010403Terrestrial SoilPAPLQLATTYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
Ga0124844_113025213300010868Tropical Forest SoilGAVPEAARAFIRFLASPDARAKWVAARLEPLADH*
Ga0105246_1127056513300011119Miscanthus RhizospherePLQLATTYEGALMSDGAVPEAARAFIRFLAEPDARARWIAAKLEPFADH*
Ga0137389_1068501323300012096Vadose Zone SoilTLLQITTSYEGALMSDGSEPQAARAFIRFLANPDARPKWVAARLEPLGER*
Ga0137365_1003901963300012201Vadose Zone SoilTNYEGALMSDGSVPEAARAFIRFLAGPDARGKWVAAKLEPPTDR*
Ga0137365_1121351423300012201Vadose Zone SoilTNYEGALMSDGSVPEAARAFIRFLAGPDARGKWVAAKLEPPADR*
Ga0137399_1088742023300012203Vadose Zone SoilAPLQLVTTYEGALMSDGSVPEAARAFIRFLASADARDRWLAARLEPLADR*
Ga0137379_1150572813300012209Vadose Zone SoilIVTNYEGALMSDGSVPEAARAFIRFLAGPDARGKWVAAKLEPPTDR*
Ga0137375_1026994043300012360Vadose Zone SoilTNYEGALMSDGAVPEAARAFIRFLASPNARGKWLAARLEPPADR*
Ga0137360_1063226323300012361Vadose Zone SoilQMTTSYEGALMSDGSEPQAARAFIRFLANPEARAKWVAARLEPLAER*
Ga0150984_12215882433300012469Avena Fatua RhizosphereAPLQLATTYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
Ga0137398_1093187823300012683Vadose Zone SoilLKLAGAVPAPLQISTTYEGALLSDGSVPEAATAFIRFMAEPDARAKWIAAKLEPLLDH*
Ga0126375_1003553763300012948Tropical Forest SoilTNYEAALMSDGAVPEAARAFIRYLASHDARAKWIAAKLEPAER*
Ga0164298_1061510423300012955SoilKLLQVATSYEGALMSDGAVPEAARAFIRFLAGPDARAKWLAAKLEPSADH*
Ga0126369_1043274233300012971Tropical Forest SoilTSYEGAVMSDGAEPLAARAFIRFLASPETRAKWLAARLEPLAER*
Ga0126369_1154996523300012971Tropical Forest SoilLGLYNVSEIPQGKGLKLAGPVPAPLQINTTYEAAMTSDGDAFEATRAFILHLADPEARATWLAAKLEPLLDH*
Ga0126369_1278337823300012971Tropical Forest SoilDGSEPQAARAFIRFLANPDARAKWVAARLEPLTGR*
Ga0164306_1111952513300012988SoilTTYEGALMSDGAVPEAARAFIRFLAEPDARAKWLAAKLEPFAEH*
Ga0164306_1123708123300012988SoilSDGSEPQAARAFIRFLASPEARAKWLSARLEPRADR*
Ga0163163_1299404413300014325Switchgrass RhizosphereLQLATTYEGALMSDGAVPEAARAFIRFLAEPDARARWIAAKLEPFADH*
Ga0157380_1240391323300014326Switchgrass RhizosphereGPVPAPLQLATTYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH*
Ga0157376_1120654813300014969Miscanthus RhizosphereTTYEGALMSDGAVPEAARAFIRFLAEPDARARWIAAKLEPFADH*
Ga0132256_10372240013300015372Arabidopsis RhizosphereLQINTTYEGALMSDGSVPQAARAFLRYLAEPEARPKWIAAKLEPAADH*
Ga0182036_1092634213300016270SoilTLLQIKTSYEGALMSDGAVPEAARAFIRFLASNEVRAKWLAAKLEPSPDR
Ga0182041_1088150613300016294SoilVPALLQVATMYEAALMSDGSVPEAARAFIQFLSAPGARAKWTAAKLEPAGR
Ga0182034_1187785013300016371SoilSEIPEGKGLALAGPVPALLQIATSYEGALMSNGSVPEATRAFIRFLANPEARAKWVAAKLEPLAER
Ga0163161_1022693513300017792Switchgrass RhizosphereLSEIPEGKGLKIAGPVPAPLQLATTYEGALMSDGAVPETSRAFIRFLAEPDARAKWIAAKLEPFADH
Ga0163161_1108550913300017792Switchgrass RhizosphereLMSDGAVPEAARAFIRFLAEPDARAKWLAAKLEPFAEH
Ga0184625_1066655613300018081Groundwater SedimentEGTGVKLAGPVPAPLQLTTTFEGALMSDGSVPEAARAYIRFLANADARDKWTAAKLEPLGDH
Ga0066662_1198628213300018468Grasslands SoilVTTSYEGALMSDGAVPEAARAFIRFLASHDARAKWLAAKLEPSER
Ga0066669_1028790813300018482Grasslands SoilYEGALMSDGAVPEAARAFIRFLAGPEARAKWLAAKLEPTPEH
Ga0193730_111349033300020002SoilLMSDGSVPQAAREFIRFLSDPDARAKWLAARLEPLADH
Ga0210407_1019472713300020579SoilSYEGGLMSDGAVPEAARAFIRFLASIEARPKWVAAKLEPSTEH
Ga0126371_1080772213300021560Tropical Forest SoilEGAVMSDGAVPEAARAFIRFLAGSEARPKWLAAKLEPSPDR
Ga0126371_1227646013300021560Tropical Forest SoilIPEGKGLAFAGPVPALLQIATSYEGALMSDGSEPQAARAFIRFLANPDAHAKWLAARLEPLAHR
Ga0126371_1385691913300021560Tropical Forest SoilAGPVPALLQIATSYEGAVMSDGAEPLAARAFIRFLANPEARAKWVAARLEPLAER
Ga0222623_1019446213300022694Groundwater SedimentALMSDGSVPQAAREFIRSLSDPDARAKWLAARLEPLADH
Ga0222622_1047979413300022756Groundwater SedimentGPVPAPLQLATTYEGALMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLADH
Ga0179589_1021233613300024288Vadose Zone SoilGALMSDGSEPQAVRAFVRFLASPEARAKWLAARLEPPADR
Ga0207710_1009935313300025900Switchgrass RhizosphereELQINTTYEGALMSDGSVPQAARAFLRYLAEPEARPKWIAAKLEPAADH
Ga0207690_1159508723300025932Corn RhizosphereGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH
Ga0207679_1110643213300025945Corn RhizosphereLQLTTTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAAKLEPLADH
Ga0207703_1057456323300026035Switchgrass RhizosphereYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAAKLEPLADH
Ga0207678_1083770113300026067Corn RhizosphereAGPVPAPLQLTTTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAAKLEPLADH
Ga0209350_101613133300026277Grasslands SoilMSDGSVPEAARAFIRFLAGPDARGKWVAAKLEPPADR
Ga0179593_113769043300026555Vadose Zone SoilMSDGSVPQAAREFIRFLSDPDARAKWLAARLEPLADH
Ga0209527_102529833300027583Forest SoilASAGTGMDASYEGALMSEGSVPQAARAFIHFLASEDARPHWLAAKLDPVGER
Ga0209331_100410633300027603Forest SoilMSDGTAPEAARAFILLLASPDARSAWVAAKLEPASDR
Ga0209656_1021200223300027812Bog Forest SoilQISTSYEGALMSDGAEPEAARAFIRFLAGPDAHAQWLAARLEPLGDR
Ga0209701_1010608223300027862Vadose Zone SoilMMTDGAVPETARAFVRFSAGPEARAGWAAAKLEPLPDH
Ga0209590_1027247813300027882Vadose Zone SoilDGSEPQAARAFVRFLASPEARAKWLAARLKPLADR
Ga0209488_1037144713300027903Vadose Zone SoilPLQLATTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAARLEPLADH
Ga0307322_1003736433300028710SoilLKIAGPVPAPLQLATTYEGALMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLAGH
Ga0307317_1027175823300028720SoilDGSVPQAAREFIRFLSEPEARAKWLAARLEPLADH
Ga0307319_1004875433300028722SoilYEGALMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLADH
Ga0307280_1031232823300028768SoilGLKIAGSVPAPLQLATTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAARLEPLADH
Ga0307288_1034803023300028778SoilLMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLADH
Ga0307323_1029546013300028787SoilLQLATTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAARLEPLADH
Ga0307299_1033958913300028793SoilPAPLQLATTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAARLEPLADH
Ga0307287_1017036713300028796SoilIAGPVPAPLQLATTYEGALMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLADH
Ga0307310_1020904633300028824SoilPVPAPLQLATTYEGALMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLADH
Ga0307312_1032223513300028828SoilGPVPAPLQLATTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAARLEPLADH
Ga0307314_1006269733300028872SoilSYEGALMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLADH
Ga0307286_1012030923300028876SoilAGPVPAPLHLATTYEGALMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLADH
Ga0307304_1011348333300028885SoilATTYEGALMSDGSVPQAAREFIRFLSEPEARAKWLAARLEPLAGH
Ga0307304_1026475113300028885SoilPVPAPLQLATTYEGALMSDGSVPQAAREFIRFLSDPDARAKWLAARLEPLADH
Ga0307500_1029205023300031198SoilTDGRVPEAARAFVRFLSEPDARAKWISSKLEPLADH
Ga0302323_10188462213300031232FenKSGAPDAETYEAALMSDGAAVEASRAFVNFLAGEDVRAKWAAAGLEPLGDR
Ga0318516_1002247953300031543SoilIDTTYEGALMSDGVEADTARAFIRFLASPEARASWVAARLEPLGEQ
Ga0310887_1043420813300031547SoilYEGALMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH
Ga0318571_1040099223300031549SoilGALMSDGAVPEAARAFIRFLASNEVRAKWLAAKLEPSPDR
Ga0318571_1040139023300031549SoilLMSDGVEADTARAFIRFLASPEARASWVAARLEPLGEQ
Ga0310915_1008934713300031573SoilGPVPARLQIATSYEGALMSDGSEPLAARAFIRFLANPEARAKWLAARLEPLADH
Ga0318555_1030863213300031640SoilLQIKTSYEGALMSDGAVPEAARAFIRFLASNEVRAKWLAAKLEPSPDR
Ga0318502_1006852513300031747SoilGLTLAGPVPAPLQLTTSYEGALMSDGSEPQAARAFIRFLANLDARAKWIAARLEPLGDRR
Ga0318502_1091848123300031747SoilIATSYEGALMSDGSVPEATRAFIRFLANPEARAKWLAARLEPPAER
Ga0318492_1031459823300031748SoilYNVSEIPEGKGLALAGPVPALLQIATSYEGALMSDGSVPEATRAFIRFLANPEARAKWLAARLEPPAER
Ga0318492_1071378323300031748SoilYEGALMSDGSEPQAARAFIRFLANLDARAKWIAARLEPLGDRR
Ga0318494_1011412833300031751SoilGALMSDGVEADTARAFIRFLASPEARASWVAARLEPLGEQ
Ga0318554_1026061913300031765SoilTYEGALMSDGVEADTARAFIRFLASPEARASWVAARLEPLGEQ
Ga0318566_1038958723300031779SoilGKGLALAGPVPALLQIATSYEGALMSNGSVPEATRAFIRFLANPEARAKWVAAKLEPLAE
Ga0318508_102215733300031780SoilDTTYEGALMSDGVEADTARAFIRFLASPEARASWVAARLEPLGEQ
Ga0318508_122767323300031780SoilSEIPEGKGLALAGPVPALLQIATSYEGALMSDGSVPEATRAFIRFLANPEARAKWLAARLEPPAER
Ga0318548_1000277993300031793SoilMSDGSEPQAARAFIRFLANLDARAKWIAARLEPLGDRR
Ga0318550_1025146223300031797SoilGLYNVSEIPEGKGLALAGPVPALLQIATSYEGALMSNGSVPEATRAFIRFLANPEARAKWVAAKLEPLAER
Ga0318497_1033626623300031805SoilLQIATSYEGALMSDGSVPEATRAFIRFLANPEARAKWLAARLEPPAER
Ga0307473_1068677313300031820Hardwood Forest SoilEGGLMTDGSVPEAASAFVRFLAEPDARAKWLAAKLDPLADH
Ga0318564_1014857233300031831SoilQIATSYEGALMSDGSEPQAARAFIRFLANPEARAKWVAARLEPLADH
Ga0318517_1055551823300031835SoilLQLTTSYEGALMSDGSEPQAARAFIRFLANPDARAKWVAARLEPLTGR
Ga0318527_1018983123300031859SoilVPPPLQVHTVYEGALMSDGSEPEASRAFIRFLAGSGTRATWVAARLEPLGDR
Ga0318520_1110097913300031897SoilLLQVATMYEAALMSDGSVPEAARAFIQFLSAPGARAKWTAAKLEPAGR
Ga0306923_1200924413300031910SoilSYEGALMSDGSEPQAARAFIRFLANPDARAKWVAARLEPLTGR
Ga0310912_1108681823300031941SoilKGLTLAGPVPAPLQLTTSYEGALMSDGSEPQAARAFIRFLANLDARAKWIAARLEPLGDR
Ga0310916_1130087823300031942SoilSDGSEPQAARAFIRFLANPDARAKWLAARLEPLGDRR
Ga0310913_1019002013300031945SoilYEGALMSDGSEPEASRAFIRFLAGSGTRATWVAARLEPLGDR
Ga0214473_1111692313300031949SoilFAGPVPNPLQINTVYEAALMSDGSVVEAARAFIRFLASADARPRWAAAKLEPLADH
Ga0318549_1016359113300032041SoilPVPALLQIATSYEGALMSDGSEPLAARAFIRFLANPEARAKWLAARLEPLADH
Ga0318545_1019491313300032042SoilLYNVSEIPEGKGLALAGPVPALLQIATSYEGALMSDGSVPEATRAFIRFLANPEARAKWLAARLEPPAER
Ga0318556_1002859343300032043SoilLTTSYEGALMSDGSEPQAARAFIRFLANLDARAKWIAARLEPLGDRR
Ga0318558_1064706123300032044SoilTTYEGALMSDGVEADTARAFIRFLASPEARASWVAARLEPLGEQ
Ga0318506_1052642313300032052SoilLQVATMYEAALMSDGSVPEAARAFIQFLSAPGARAKWTAAKLEPAGR
Ga0318575_1002117653300032055SoilAPLQLTTSYEGALMSDGSEPQAARAFIRFLANLDARAKWIAARLEPLGDRR
Ga0318575_1043569523300032055SoilGLALAGPVPALLQIATSYEGALMSDGSVPEATRAFIRFLANPEARAKWLAARLEPPAER
Ga0318533_1000381273300032059SoilQIDTTYEGALMSDGVEADTARAFIRFLASPEARASWVAARLEPLGEQ
Ga0318533_1021244623300032059SoilSYEGAVMSDGAEPQAARAFIRFLANPEARAKWLAAKLEPLAER
Ga0318533_1119889513300032059SoilEGALMSDGSEPQAARAFIRFLANLDARAKWIAARLEPLGDRR
Ga0318505_1028780723300032060SoilGALMSDGSEPEASRAFIRFLAGSGTRATWVAARLEPLGDR
Ga0306924_1162003923300032076SoilPAPLQVDTSYEGGLLSDGSVPEAARALIEFLASSDNHPHWSAARLEPLGDR
Ga0318577_1038941613300032091SoilQVHTVYEGALMSDGSEPEASRAFIRFLAGSGTRATWVAARLEPLGDR
Ga0318540_1004812143300032094SoilTTSYEGALMSDGSEPQAARAFIRFLANLDARAKWIAARLEPLGDRR
Ga0306920_10324724413300032261SoilPVQITTSYEGALMSDGSEPQAARAFIRFLANPDARAKWVAARLEPLTGR
Ga0310914_1043721213300033289SoilIVYEGALMSDGAAPEAARAFILFLGSPDARPAWIAAKLDPAPDR
Ga0364945_0278344_341_4543300034115SedimentMSDGSVPEAARAFVRFLASADARDKWTAAKLEPLGEH
Ga0364933_180746_411_5243300034150SedimentMSDGSVPEAARAYIRFLANADARDKWTAAKLEPLGDH
Ga0364943_0287612_496_6093300034354SedimentMSDGAVPEASRAFIRFLAEPDARAKWIAAKLEPFADH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.