NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F040304

Metagenome / Metatranscriptome Family F040304

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F040304
Family Type Metagenome / Metatranscriptome
Number of Sequences 162
Average Sequence Length 63 residues
Representative Sequence VIEGGFGLDVKVWKRLSIRGEVRDFWSGEPDFPLAPTGKSRQHNYFVGGGAFWRF
Number of Associated Samples 135
Number of Associated Scaffolds 162

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.43 %
% of genes near scaffold ends (potentially truncated) 41.98 %
% of genes from short scaffolds (< 2000 bps) 39.51 %
Associated GOLD sequencing projects 129
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (61.111 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(9.259 % of family members)
Environment Ontology (ENVO) Unclassified
(26.543 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.938 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 42.17%    Coil/Unstructured: 57.83%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 162 Family Scaffolds
PF13559DUF4129 57.41
PF00291PALP 19.14
PF11992TgpA_N 1.23
PF14691Fer4_20 0.62
PF01842ACT 0.62
PF07642BBP2 0.62
PF00701DHDPS 0.62
PF13462Thioredoxin_4 0.62
PF02129Peptidase_S15 0.62
PF00005ABC_tran 0.62
PF01738DLH 0.62
PF02868Peptidase_M4_C 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 162 Family Scaffolds
COG03294-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyaseCell wall/membrane/envelope biogenesis [M] 1.23
COG3227Zn-dependent metalloprotease (Neutral protease B)Posttranslational modification, protein turnover, chaperones [O] 0.62


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.11 %
All OrganismsrootAll Organisms38.89 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908043|A2_c1_ConsensusfromContig63322All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
2140918007|ConsensusfromContig194046All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300004092|Ga0062389_101957925All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter763Open in IMG/M
3300004092|Ga0062389_103625142All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter579Open in IMG/M
3300004152|Ga0062386_100698073All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300004609|Ga0068958_1106680All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005436|Ga0070713_100197622All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1815Open in IMG/M
3300006162|Ga0075030_101052737All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300006914|Ga0075436_100937840All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300009524|Ga0116225_1033926All Organisms → cellular organisms → Bacteria2518Open in IMG/M
3300009759|Ga0116101_1088051All Organisms → cellular organisms → Bacteria → Acidobacteria710Open in IMG/M
3300010048|Ga0126373_12204664Not Available612Open in IMG/M
3300010343|Ga0074044_10316431All Organisms → cellular organisms → Bacteria → Acidobacteria1026Open in IMG/M
3300012363|Ga0137390_11568956All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300014498|Ga0182019_10979561All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300017933|Ga0187801_10391438All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300017942|Ga0187808_10606601All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300017955|Ga0187817_10585620All Organisms → cellular organisms → Bacteria → Acidobacteria712Open in IMG/M
3300017955|Ga0187817_10623249All Organisms → cellular organisms → Bacteria → Acidobacteria688Open in IMG/M
3300017959|Ga0187779_10676392All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300017975|Ga0187782_11293115All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300018035|Ga0187875_10135372All Organisms → cellular organisms → Bacteria → Acidobacteria1385Open in IMG/M
3300018057|Ga0187858_10078848All Organisms → cellular organisms → Bacteria2282Open in IMG/M
3300018085|Ga0187772_10035559All Organisms → cellular organisms → Bacteria2986Open in IMG/M
3300018085|Ga0187772_10086678All Organisms → cellular organisms → Bacteria1995Open in IMG/M
3300018085|Ga0187772_10186780All Organisms → cellular organisms → Bacteria → Acidobacteria1387Open in IMG/M
3300018086|Ga0187769_11037771All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117620Open in IMG/M
3300018086|Ga0187769_11386440All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300018468|Ga0066662_11616747All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300019284|Ga0187797_1424732All Organisms → cellular organisms → Bacteria → Acidobacteria1114Open in IMG/M
3300021178|Ga0210408_11284614All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300021181|Ga0210388_11344740All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7601Open in IMG/M
3300021420|Ga0210394_10641462All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300021476|Ga0187846_10072966Not Available1495Open in IMG/M
3300021559|Ga0210409_10501547All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300021560|Ga0126371_10814455All Organisms → cellular organisms → Bacteria → Acidobacteria1080Open in IMG/M
3300022722|Ga0242657_1131250All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300022730|Ga0224570_100011All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7899Open in IMG/M
3300025406|Ga0208035_1001414All Organisms → cellular organisms → Bacteria3779Open in IMG/M
3300025509|Ga0208848_1063618All Organisms → cellular organisms → Bacteria → Acidobacteria774Open in IMG/M
3300026304|Ga0209240_1048378All Organisms → cellular organisms → Bacteria1604Open in IMG/M
3300027011|Ga0207740_1009425All Organisms → cellular organisms → Bacteria → Acidobacteria1466Open in IMG/M
3300027045|Ga0207726_1009688All Organisms → cellular organisms → Bacteria → Acidobacteria1660Open in IMG/M
3300027061|Ga0209729_1037843All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300027376|Ga0209004_1043127Not Available752Open in IMG/M
3300027502|Ga0209622_1076382All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300027545|Ga0209008_1075429All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300027812|Ga0209656_10323965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium707Open in IMG/M
3300027855|Ga0209693_10232601All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300027911|Ga0209698_10790437Not Available717Open in IMG/M
3300028036|Ga0265355_1021557All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300028789|Ga0302232_10639913All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300030399|Ga0311353_10952599All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7722Open in IMG/M
3300030974|Ga0075371_10848053All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300031247|Ga0265340_10127686All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300031249|Ga0265339_10393598All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7648Open in IMG/M
3300031708|Ga0310686_114653822All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300031718|Ga0307474_11364007All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7559Open in IMG/M
3300031753|Ga0307477_10026363All Organisms → cellular organisms → Bacteria3971Open in IMG/M
3300031754|Ga0307475_10320664All Organisms → cellular organisms → Bacteria → Acidobacteria1244Open in IMG/M
3300031754|Ga0307475_10723361All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae793Open in IMG/M
3300031823|Ga0307478_11147209Not Available648Open in IMG/M
3300031912|Ga0306921_11838394All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300032160|Ga0311301_10506650All Organisms → cellular organisms → Bacteria1786Open in IMG/M
3300032180|Ga0307471_101254610All Organisms → cellular organisms → Bacteria → Acidobacteria904Open in IMG/M
3300032770|Ga0335085_11930258All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300032892|Ga0335081_10557363Not Available1426Open in IMG/M
3300032892|Ga0335081_12690585All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300032897|Ga0335071_12043575All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7516Open in IMG/M
3300033134|Ga0335073_10852087Not Available968Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.26%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.17%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.17%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil5.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.56%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.94%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.32%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.32%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.32%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.70%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.70%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.09%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.47%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.47%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.85%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.85%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.23%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.23%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.23%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.62%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.62%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.62%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.62%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.62%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.62%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.62%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908043Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2EnvironmentalOpen in IMG/M
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004609Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022730Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2Host-AssociatedOpen in IMG/M
3300025406Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025475Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025509Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300027011Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)EnvironmentalOpen in IMG/M
3300027045Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)EnvironmentalOpen in IMG/M
3300027061Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028036Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2Host-AssociatedOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030813Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030974Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033807Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10EnvironmentalOpen in IMG/M
3300033808Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2_c1_003313602124908043SoilDYSGVNPGKSTTSAVFELGLGLDVRVWRKLSVRGGVRDFWSGEPDFPLAPTGKTRQHNFFVGGGVFYRF
A_all_C_013878902140918007SoilPWVSAGAGFGHFSDGKNLDYSGVNPGKSTTSAVFELGLGLDVRVWRKLSVRGGVRDFWSGEPDFPLAPTGKTRQHNFFVGGGVFYRF
JGI12712J15308_1000440263300001471Forest SoilGAVIEGGIGLDVKVWRHLSIRGEVRDFWSGEPDFPLAPTGHSRMHNYLVGGGAFWRF*
JGI12712J15308_1012650723300001471Forest SoilTGAAIQGGAGLDVKLWHSLGVRGEVRDFWSQHPDFPLAPTGRSRQHNYFVGGGAFWRF*
Ga0062385_1008258413300004080Bog Forest SoilGLGLDVKVWRKLSIRGEVRDFWSGEPDFPLAPTGKSRQHNFFVGGGAFWRF*
Ga0062384_10045436823300004082Bog Forest SoilVIQGGFGLDVRVLHNFSIRLDVRDFWSGTPSLPLADTGKTRQNNYFVGGGVVWHF*
Ga0062389_10195792513300004092Bog Forest SoilSTLDYGGANPGKSSTGFVLQGGLGLDVKVWKKISIRAEVRDFWSGEPSFPLAPTGKSRQHNYFVGGGAFWRF*
Ga0062389_10289473513300004092Bog Forest SoilLGLDVKVYKNISLRGEVRDFWSGEPDYPLAPTGKSRQHNYFVGGGVYWRF*
Ga0062389_10362514213300004092Bog Forest SoilVYGGANPGKSTTSAVVEGGLGLDVKVWRKLSMRGEVRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF*
Ga0062386_10018887713300004152Bog Forest SoilIGAGLDVRFWHRFSIRGELRDFWSGTPDFPLADTGKTRQHNYFVSGGVVYHF*
Ga0062386_10069807333300004152Bog Forest SoilGLDVKVWKKLSMRGEVRDFWSGEPDYPLAPTGKSRQHNYFVGGGVFWRF*
Ga0068958_110668023300004609Peatlands SoilVSLGAGFGYFTQNQNLVYSGGKNPGKGGATSVIQGGFGLDVRFKGKWSMRGEVRDFWSGEPNFPNAPTGKSRQHNYFVGGGIVYRF*
Ga0070713_10019762233300005436Corn, Switchgrass And Miscanthus RhizosphereGAGFGHISQGNQLIYGGVNPGKSTTSVVVQAGFGLDVKVWRRLSARGEVRDFWSGEPDFPLAPTGKTRQHNFFVGAGAFWRF*
Ga0070710_1104941923300005437Corn, Switchgrass And Miscanthus RhizosphereTSGVLELGLGLDVKVSKRVYIRGQVRDFWSGEPDFPLADTGKSRQHNFFVGGGAYWRF*
Ga0070761_1003964543300005591SoilLDVKVRGKFSIRGEVRDFWSGEPDFPNAPTGHSRQHNYFVGGGVVYRF*
Ga0070762_1064546223300005602SoilGFGLDVRVLHQFSIRLDVRDFWSGTPNLPLADTGKTRQHNYFVGGGVVWHF*
Ga0070763_1033117823300005610SoilSTTSAAIEGGAGLDVKVWSKLSMRAEVRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF
Ga0070764_1011807023300005712SoilGATSAIEGGFGLDVRVKGRFSIRGEVRDFWSGEPDFPNAPTGHSRQHNYFVGGGVVYRF*
Ga0070717_1010461313300006028Corn, Switchgrass And Miscanthus RhizosphereTTGVIQGGIGLDVKFWHRFSIRGEVRDFWSGEPDFPLAATGKTRQHNYFVAGGVIWHF*
Ga0070717_1122658813300006028Corn, Switchgrass And Miscanthus RhizosphereVKVWRRLSIRGEVRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF*
Ga0066696_1096380013300006032SoilKSTTSAVLEGGIGLDVKVWRRLSIRGEVRDFWSGEPDFPLAPTGKTRQHNFFVAGGAFWRF*
Ga0075023_10043847613300006041WatershedsPGKSTTSAVIEAGFGLDVKVWSKLSIRMDVRDFWAGEPDFPLAPTGKTRQHNFFVGGGAFWRF*
Ga0075030_10105273723300006162WatershedsGGANPGKSTTSAVVEGGIGLDVRVWHKLSIRGEARDFWSGEPDYPLAPTGKTRQHNYFVGGGAFWRF*
Ga0075018_1049938713300006172WatershedsALQGGLGLDVKVWRNLSMRGEVRDFWSGEPNFPLAPTGKSRQHNYFVGGGAFWRF*
Ga0070765_10134869223300006176SoilGLDVKVWKRLSIRGEARDFWSGAPDFPLAPTGKTRQHNYFVGGGVFWRF*
Ga0073928_1065549223300006893Iron-Sulfur Acid SpringVLQIGVGLDVKVWHRFSIRGQVRDFYSGTPDLPLADTGKSRQHNYFVGGGVVYHI*
Ga0075436_10093784013300006914Populus RhizosphereGSSLIYGGSNPGKSTTSGVLELGLGLDVKLSKRVYIRGQVRDFWSGEPDFPLADTGKSRQHNFFVGGGAYWRF*
Ga0066709_10384078223300009137Grasslands SoilFGSDVKGWRKLRMRGEVRDFWSGEPDFPLAPTGKSRQHNYFVAGGAFWRF*
Ga0099792_1094398813300009143Vadose Zone SoilSTTGVIQAGIGLDVRVWHRFSIRGQVRDFWSGTPDLPLADTGKTRQHNFFVGGGVVWHF*
Ga0116225_103392613300009524Peatlands SoilGLDYGGVNPGKSTTSAVIEGGLGLDVKVWKKLSMRGEVRDFWSGEPDYPLAPTGKSRQHNYFVGGGVFWRF*
Ga0116220_1033556613300009525Peatlands SoilNPGKGGATSVIQGGFGLDVRFKGKWSMRGEVRDFWSGEPNFPNAPTGKSRQHNYFVGGGIVYRF*
Ga0116101_108805123300009759PeatlandSEGSMLDYSGTNPGKSTTSAVIQGGIGLDVKVWKRLSIRGEVRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF*
Ga0126373_1220466423300010048Tropical Forest SoilSEGNQLIYGGVNPGKSTTSAVIQGGFGLDVKVWSKLSARGQVRDFWSGEPDFPLAPTGKTRQHNFYVGAGAFWRF*
Ga0074044_1031643113300010343Bog Forest SoilTTAVSPWVSFGGGVGHFSQGSMLDYGGANPGKSTTGFALEGGFGLDVKVWKKLSIRLDVRDFWSGEPDFPLAPTGKTRMHNFFVGGGAFWRF*
Ga0126379_1308015213300010366Tropical Forest SoilLQGGLGLDVKVWRKLSIRGEVRDFWSGEPDFPLAPTGSTRQHHYLVGGGAFWRF*
Ga0126381_10045688913300010376Tropical Forest SoilVKVWRKLSIRLDVRDFWAGQPDFPLAPTGKTRQHNFFVGGGAFWRF*
Ga0136449_10193526723300010379Peatlands SoilLQGGLGLDVRVWHRFSIRGEVRDFWSGTPNLPLADTGKSGQHNYFVGAGVVWHF*
Ga0150983_1319953623300011120Forest SoilVIEGGFGLDVKVWKRLSIRGEVRDFWSGEPDFPLAPTGKSRQHNYFVGGGAFWRF*
Ga0137392_1136539813300011269Vadose Zone SoilVWHRFSIRGEARDFWSGEPDFPLAATGKTRQHNYFVAAGIVWRF*
Ga0137389_1070430913300012096Vadose Zone SoilTTGVIQGGIGLDVKVWHRFSIRGEGRDFWSGEPDFPLAATGKTRQHNYFVGAGVIYRF*
Ga0137390_1156895613300012363Vadose Zone SoilNSMLDYGGVNPGKSTTSAAIEGGFGLDVKVWKTISIRGEVRDFWSGEPDFPLAPTGHTRQHNYFVAGGAFWRF*
Ga0137413_1119210623300012924Vadose Zone SoilVIQAGIGLDVRVWHRFSIRGQVRDFWSGTPDLPLADTGKTRQHNYFVGGGVVWHF*
Ga0137419_1128940913300012925Vadose Zone SoilAGFGLDVRIWRRISIRGEVRDFWSGEPDFPLAPTGKTRQHNFFVGAGAIWHF*
Ga0164307_1164279923300012987SoilVIEAGFGLDVKVWRKLSIRMDVRDFWAGQPDFPLAPTGNTRQHNIFVGGGAFWRF*
Ga0181534_1012626513300014168BogIEGGAGLDVKVRGKFSIRGEVRDFWSGEPDFPNAPTGHTRQHNYFVGGGVVYRF*
Ga0182019_1097956123300014498FenSGVNPGKSTTSAVFELGLGLDVRVWRKLSVRGGVRDFWSGEPDFPLAPTGKTRQHNFFVGGGVFYRF*
Ga0187802_1024101923300017822Freshwater SedimentKKLSFRGGLRDFWAGEPNFPLAPTGKTRQHNFFVGAGAFWRF
Ga0187801_1039143813300017933Freshwater SedimentTAVSPWVSFGVGFAHYSEGSQLLYGGTNTGKNTTSAAIEGGLGLDVKVTNRLSLRGGVRDFWAGEPDFPLAPTGKTRQHNYFVFGGLFWRF
Ga0187808_1060660123300017942Freshwater SedimentPTTAVSPWVSFGAGFGHISENSQLIYGGLNPGKSTTGAVIEAGFGLDVKVWKKLSIRGGVRDFWAGQPDFPLAPTGKTRQHNYVVTGGAFWRF
Ga0187847_1006793413300017948PeatlandAVIQGGIGLDVKVWKRLSIRGEVRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF
Ga0187847_1071212023300017948PeatlandVIEGGLGLDVKVWSKLSMRGEVRDFWSGEPDYPLAPTGKTRQHNYFVGGGMFWRF
Ga0187817_1058562023300017955Freshwater SedimentWVSFGAGFGHFSEGNTLAFGGANPGKSTTNFVLEGGLGLDVRVWSRMSIRGQVRDFWSGEPDFPLAPTGKSRQHNFFVSGGAFWRF
Ga0187817_1062324923300017955Freshwater SedimentWVSFGVGFAHYSEGSQLLYGGTNTGKNTTSAAIEGGLGLDVKVTNRLSLRGGVRDFWAGEPDFPLAPTGKTRQHNYFVFGGLFWRF
Ga0187779_1067639223300017959Tropical PeatlandGGFAHFSQGKNLDYGGPTNPGKNTTSGVLEGGFGLDVKFWRKMSIRGEVRDYWSGEPDFPLAHTGKTRQHNYFVGGGVIWRF
Ga0187782_1129311513300017975Tropical PeatlandLDYSGTNPGKATTSATIEGGLGLDVKAWRQLSIRGEVRDFWSGEPDFPLTPTGHSRMHNYFVGGGAFWRF
Ga0187823_1036704113300017993Freshwater SedimentGLDVKVWRRLSVRGEVRDFYSGEPDFPLAATGKSRQHNFFVGGGAFWRF
Ga0187805_1008675613300018007Freshwater SedimentDVKAWKKLSIRGEVRDFWSGAVDFPLAPTSKTRQHNFFVGGGAFWRF
Ga0187875_1013537213300018035PeatlandSLGAGFGHISEYPTLLYSGANPGKSTTSFAFQWGIGLDVKVWKQLFIRGEMRDFWSGSPDYPLAPTGKSRQQNYFVGGGGFWRF
Ga0187883_1010861623300018037PeatlandSTSGVLQIGVGLDVRIWRRIGIRGGGRDFWSGTPDFPLADTGKTRQHNYFISGGVVYHF
Ga0187871_1004958913300018042PeatlandGVMQGGLGLDVRVLGRFSIRGEVRDFWSGEPNFPLADTGKTRQHNFFVGGGVVWHF
Ga0187858_1007884823300018057PeatlandVLGQGSTLIYGDANPGKSTTSGVVEGGFGVDVKVWSRLSIRGEVRDFWSGEPDFPLAPTGRSRQHNYFVGGGAFWRF
Ga0187772_1003555913300018085Tropical PeatlandYGGTNPGGSKTSGVLEAGVGLDVKVWKKLSVRLDVRDFWSGEPDFPLAPTGKSRQHNYFVGGGAFWRF
Ga0187772_1008667813300018085Tropical PeatlandDTLVYGGTNPGKSTTSGVLQGGLGLDVKFVSHLIIRGEARAFWSGEPSFPLAPTGKTRQHNYFVGAGVFWRF
Ga0187772_1018678023300018085Tropical PeatlandDTLVYGGTNPGKSTTSGVLQGGLGLDVKFVSHLIIRGEARDFWSGEPSFPLAPTGKTRQHNYFVGAGVFWRF
Ga0187769_1071825923300018086Tropical PeatlandEAGIGLDVKVWRQLSMRGGVRDFWAGEPDFPLAPTGKSRFHNYFVGAGVFWRF
Ga0187769_1103777113300018086Tropical PeatlandAGFGLDVNPFQHRFRRFGFRLDVRDFWSGTPNLPLADTGKTRQHNFFVGGGVIWHF
Ga0187769_1138644013300018086Tropical PeatlandEGGVGLDVNVWKQLFIRGEGRDFWSQEPDFPLAPTGKSRQHHFFVGVGAFWRF
Ga0066662_1161674713300018468Grasslands SoilPGKGTTMAVLQYGVGLDVRIKRRLFVRGEGRDYWAGEPDFPLAPTGKSRQHNYFVGGGVFWRF
Ga0187797_142473213300019284PeatlandNPGGSKTSGVLEAGVGLDVKVWKNLSVRLNVRDFWSGEPNFPLAPTGKSRQHNYFVGGGAFWRF
Ga0210401_1093058213300020583SoilVIEGGFGLDVKVWKRLSIRGEVRDFWSGEPDFPLAPTGKSRQHNYFVGGGAFWRF
Ga0210408_1128461413300021178SoilISQGNQLIYGGVNPGKSTTSVVVQAGFGLDVKVWRRLSARGEVRDFWSGEPDFPLAPTGKTRQHNFFVGAGAFWRF
Ga0210396_1080913413300021180SoilKVWKKLSIRGEVRDFWSGEPDFPLAPAGKSRQHNYFVGGGAFWRF
Ga0210388_1134474023300021181SoilGGANPGKSTTSFALQGGLGLDVKVWKNLSLRGEVRDFWGGEPDFPLAPTGKSRQHNYFVGGGVFWRF
Ga0210385_1003823213300021402SoilGGFGLDVKVWKKLSIRGEVRDFWSGEPDFPLAPAGKSRQHNYFVGGGAFWRF
Ga0210394_1064146213300021420SoilLLYGGGDNPGKSTTSGVLEGAFGLDVKVWKKLSMRGEVRDFWSGAPDFPLAPTGNTRQHHYFVGGGVFWRF
Ga0187846_1007296613300021476BiofilmISQNNQLIYGGTNTGKSTTSAALELGLGLDVKVWRKLSTRAGVRDFWAGEPDFPLAPTGRTRQHNYLVSGGAFWRF
Ga0187846_1044300523300021476BiofilmPGKSKTTGVIQGGIGLDVKLWHSFSIRGQVRDFWSGEPDFPLANTGKSRQHNFFVGGGLVWHF
Ga0210402_1008630013300021478SoilALQGGLGLDVKVWKKLSIRGEVRDFWSGEPDFPLAPTGKSRQHNFFVGGGAFWRF
Ga0210402_1073178213300021478SoilSSTGFALQGGLGLDVKVWRKWSIRGEVRDFWSGEPNFPLAPTGKSRQHNYFVGGGAFWRF
Ga0210409_1050154733300021559SoilAGVGHFSQSSTLIYGGANPGKSNTGFALQGGLGLDVKVWRKMSIRAEVRDFWASEPNFPLANTGKSRFHNYFVGGGAFWRF
Ga0210409_1148731713300021559SoilSKTNFVFQAGLGLDVRVWKRWSVRGQVRDFWSGEPDFPLAPTGKTRQHNFYVSGGAFWRF
Ga0126371_1081445523300021560Tropical Forest SoilAVSPWVSFGAGFAHISQSDQLVYGGTNPGKSTTSAVIEAGFGLDVKVWRKLSIRLDVRDFWAGQPDFPLAPTGNTRQHNIFVGGGAFWRF
Ga0242649_106401713300022509SoilPNPGKSGATSAIEGGFGLDVKVRGKFSIRGEVRDFWSGEPDFPNAPTGHSRQHNYFVGGGVVYRF
Ga0242661_111521013300022717SoilGKSTTSAVIEGGFGLDVKVCKKLSIRGEVRDFWSGEPDFPLAPTGKSRQHNYFVGGGAFWRF
Ga0242657_113125023300022722SoilWVSFGAGFGHFSESSTLVYGGANPGKSTTSAVIQAGLGLDVKVWKRLSIRGGVRDFWSGEPDFPLAPTGKTRQHHFFVGGGVFWRF
Ga0242654_1018423513300022726SoilLDVKVWRRLSIRGEARDFWSGAPDFPLAPTGKTRQHNYFVGGGVFWRF
Ga0224570_10001193300022730RhizosphereQNKNTIFGGGPNPGKSGATSAIEGGFGLDVKVRGKFSIRGEVRDFWSGEPDFPNAPTGHSRQHNYFVGGGVVYRF
Ga0208035_100141413300025406PeatlandTSGVLQGGFGLDVKVWRRFSIRGEVRDFWSGTPDFPLADTGKSRQHNYFVGGGVVWHFH
Ga0208478_104037533300025475Arctic Peat SoilGLDVKVWRKLSIRGEVRDFWSGAVDFPLAPTGKSRQHNFFVGGGAFWRF
Ga0208848_106361813300025509Arctic Peat SoilGGFGHISQSSQLLYGGTNPGKSSTSAVFEGGLGLDVKVWKRLSIRGEVRDFWSGAVDFPLAPTGKSRQHNFFVGGGAFWRF
Ga0207700_1001217953300025928Corn, Switchgrass And Miscanthus RhizosphereGVIQGGFGLDVKLWRKLSMRGEVRDFWSGEPDFPLADTGKSRMHNYYVAGGAFWRF
Ga0207700_1125587523300025928Corn, Switchgrass And Miscanthus RhizosphereTTSVVVQAGFGLDVKVWRRLSARGEVRDFWSGEPDFPLAPTGKTRQHNFFVGAGAFWRF
Ga0209240_104837813300026304Grasslands SoilISGGTNPGKSKTTGVLQGGFGLDVRIWRRISIRGEVRDFWSGEPDFPLAPTGKTRQHNFFVGAGAIWHF
Ga0207740_100942523300027011Tropical Forest SoilSLGAGFGHFSQGKMLDYGGTNPGKSTTGFVIEGGLGLDVKVWKKLSIRGEVRDFWSGEPDFPLAPTGKTRQHNYLVGIGAFWRF
Ga0207726_100968813300027045Tropical Forest SoilTNPGKSTTGFVIEGGLGLDVKVWKKLSIRGEVRDFWSGEPDFPLAPTGKTRQHNYLVGIGAFWRF
Ga0209729_103784313300027061Forest SoilSFGAGFGHISQNTQLIYGGTNPGKSTTSAVIEAGFGLDVKVWRRLSIRMDVRDFWAGQPDFPLAPTGKTRQHNFFVGGGAFWRF
Ga0209004_104312723300027376Forest SoilKALVFGGNTNPGTSSTSAAVEMGVGLDVKVWRKLSLRGGLRDFWAGEPNFPLAPTGKSRQHNFFVGGGAFWRF
Ga0209622_107638213300027502Forest SoilGHISQNDQLIYGGTNPGKSTTSAVIEAGVGLDVKVWRKLSIRFEARDFWAGQPDFPLAPTGETRQHNYFVAGGAFWRF
Ga0209008_107542923300027545Forest SoilYGGGPNPGKSGATSAIEGGFGLDVRVKGRFSIRGEVRDFWSGEPDFPNAPTGHSRQHNYFVGGGVVYRF
Ga0209115_105822523300027567Forest SoilNPGKSTTGAVIEGGIGLDVKVWRHLSIRGEVRDFWSGEPDFPLAPTGHSRMHNYLVGGGAFWRF
Ga0209329_107813813300027605Forest SoilVLQAGVGLDVRVWHRFSIRGQVRDFWSGTPNFPLADTGKTRQHNFFVGGGVVWHF
Ga0209139_1031042533300027795Bog Forest SoilQGGFGLDVRPFWGGLKRLTLRGQVRDFWSGTPNLPLADTGKTRQHNYFVGGGVTWHF
Ga0209656_1032396523300027812Bog Forest SoilGLDYGGVNPGKSTTSAVIEGGIGLDVKVWKKLSMRGEVRDFWSGEPDYPLAPTGKSRQHNYFVGGGVFWRF
Ga0209811_1023912523300027821Surface SoilPGQEHDPGVIQGGFGLDVKLWRKLSMRGEVRDFWSGEPDFPLADTGKSRMHNYYVAGGAFWRF
Ga0209693_1023260123300027855SoilSTLIYGGANPGKSTTSAVIEGGFGLDVKVWKKLSIRGEVRDFWSGEPDFPLAPAGKSRQHNYFVGGGAFWRF
Ga0209167_1021059323300027867Surface SoilTSVIQGGFGLDMRVKGRFSIRGEVRDFWSGEPNFPNAPTGKSRQHNYFVGGGVVWRF
Ga0209167_1040866623300027867Surface SoilGAGLDVRLWHRFSIRGEVRDFWSGTPDLPLADTGKTRQHNYFVGGGLVWHF
Ga0209590_1036417213300027882Vadose Zone SoilPGKSTTSAVIQGGIGLDVKVWRKLSIRGEVRDFWSGEPDFPLAPTGHTRQHNYFVAGGAFWRF
Ga0209067_1011656233300027898WatershedsDVKVWRNVSIRGEVRDYWSGEPDFPLANTGKTRQHNFLVGGGAFWRF
Ga0209415_1042805913300027905Peatlands SoilGFGVDVKVWSRLSIRGEVRDFWSGEPDFPLAPTGRSRQHNYFVGGGAFWRF
Ga0209698_1079043723300027911WatershedsQGNLLIYGDGAKNPGKSTTSATIEGGFGLDVKVWKRLSMRGEVRDFWSGEPNFPLAPTGKSRMHNFFVGGGAFWSF
Ga0265355_102155723300028036RhizosphereKNTVYGGGPNPGKSGATSAIEGGFGLDVKVKGRFSIRGEVRDFWSGEPDFPNAPTGHSRQHNYFVGGGVVYRF
Ga0302232_1063991323300028789PalsaWVSVGAGFGYITQSADLVYGGANPGKSTTSAVVEGGLGLDVKVWRKLSMRGEFRDFWSGEPDFPLAPTGKTRQHNYFVGGGGFWRF
Ga0302226_1019972523300028801PalsaDVKVWRKLSMRGEFRDFWSGEPDFPLAPTGKTRQHNYFVGGGGFWRF
Ga0308309_1153934313300028906SoilGGFGLDVKVRGKFSIRGEVRDFWSGEPDFPNAPTGHSRQHNYFVGGGVVYRF
Ga0311329_1029222433300029907BogGSSTSGVIQAGLGLDVGIWRRLSIRGEVRDFWSGTPDLPLADTGKTRQHNYFVSGGAMWR
Ga0302177_1018178613300030053PalsaVKVRGKFSIRGEVRDFWSGEPNFPLAPTGHSRQHNYFVGGGVVYRF
Ga0302179_1026731623300030058PalsaVLQGGFGLDVRVWHRFSIRGEVRDFWSGTPNLPLADTGKSRQNNYFVGGGVVWHF
Ga0311353_1063614713300030399PalsaTGIGLDVKAWRRFSIRGEVRDFWSGTPDLPLADTGKTRQHNYFVGGGVVWHF
Ga0311353_1095259923300030399PalsaISEYPTLLYSGANPGKSTTSFTLEGGIGLDVKVWKQLSIRGEVRDFWSGEPDFPLAPTGHSRQHNYFVGGGAFWRF
Ga0311353_1159775413300030399PalsaIQGGVGLDVRVYHRFSIRGEVRDFWSGTPDLPLADTGKTRQHNYFVGGGVIWHF
Ga0311354_1112413223300030618PalsaGGFGLDVRVWHRFSIRGEVRDFWSGTPSLPLADTGKSRENNYFGGGGVVWHF
Ga0265762_108036923300030760SoilVVKVWRHLSIRGEVRDFWSGEPDFPLAPTGHSRMHNYLVGGGAFWRF
Ga0265762_111907413300030760SoilKVWSKLSMRAEVRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF
Ga0265750_106325813300030813SoilTTSAVVEGGLGLDVKVWSKLSMRAEVRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF
Ga0075371_1084805313300030974SoilSNNLAYGGVNPGKSTTSAVIQGGVGLDVKVWRKLSIRGEVRDFWSGEPDFPLADTGKTRQHNFFVAGGAFWRF
Ga0302180_1037627113300031028PalsaGKSGATSAIEGGAGLDVKVRGKFSIRGEVRDFWSGEPDFPNAPTGHTRQHNYFVGGGVVYRF
Ga0265340_1012768613300031247RhizosphereGTNPGTSSTSAVFEGGLGLDVKVWKRLSIRGEVRDFWSGAVDFPLAPTGKSRQHNFFVGGGAFWRF
Ga0265339_1039359813300031249RhizosphereVGGGFGHISQSSQLLYGGTNPGKSSTSAVFEGGLGLDVKVWKSLSIRGEVRDFWSGAVDFPLAPTGKSRQHNFFVGGGAFWRF
Ga0265316_1009179623300031344RhizosphereIGLDVKVWRKLSMRGEVRDFWSGEPDFPLAPTGKSRQHNFFVGGGVFWRF
Ga0170818_11185242123300031474Forest SoilTTSAVIQGGIGLDVKVWRKLSIRGEVRDFWSGEPDFPLADTGKTRQHNFFVAGGAFWRF
Ga0302326_1046058613300031525PalsaGFGLDVRVWHRFSIRGEVRDFWSGTPSLPLADTGKSRENNYFVGGVVWHF
Ga0310686_10383523913300031708SoilDVKVWSKLSMRGEVRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF
Ga0310686_11465382213300031708SoilSTLLYGGTNPGKSTNGFVIQGGLGLDVKVWKNVSIRGEVRDFWSGEPDYPLAPTGKTRQHNYFVGGGAYWRF
Ga0307476_1017818023300031715Hardwood Forest SoilQGGFGLDVRVLHRFSIRGQVRDFWSGTPNLPLADTGKSRQHNYFVGGGVVWHF
Ga0307474_1136400713300031718Hardwood Forest SoilPGKSTTSFALQGGLGLDVKVWKNLSLRGEVRDFWGGEPDFPLAPTGKSRQHNYFVGGGVFWRF
Ga0307474_1148829923300031718Hardwood Forest SoilSKTTGVIQGGIGLDVRVWHRFSIRGQVRDFWSGTPDLPLADTGKTRQHNYFVGGGVVWHF
Ga0307477_1002636343300031753Hardwood Forest SoilIEAGFGLDVKIWRKISLRGEVRDFWSGEPDFPLAATGKTRQHNFFVGGGAIWRF
Ga0307475_1032066423300031754Hardwood Forest SoilIRFGAGFGHISQNNQLIYGGTNPGNSTTSAVIEAGFGLDVKVWRKLSIRKDVRDFWAGQPDFPLAPTGKTRRHNFFVDGGAFWRL
Ga0307475_1072336113300031754Hardwood Forest SoilLYSGGANPGKSTTSGVLEAGLGLDVRVWHHFSVRGQVRDFWSGEPDFPLAPTGKTRQHNYFVGGGFVWHF
Ga0307475_1121777223300031754Hardwood Forest SoilSTSGVIQAGLGLDVRVWHRFSIRGQVRDFWSGTPDLPLADTGKTRQHNYFVGAGVVWHF
Ga0307473_1066808213300031820Hardwood Forest SoilVIEAGFGLDVKVWRKLSIRGEVRDFWAGQPDFPLAPTGNTRQHNYFVGGGAFWRC
Ga0307478_1011013223300031823Hardwood Forest SoilDVKVWKKISIRGEVRDFWSGEPSFPLAPTGKSRQHNYFVGGGAFWRF
Ga0307478_1114720923300031823Hardwood Forest SoilSALVFGGNNNPGTSSTSAAVEMGVGLDVKVWKKLSIRGGLRDFWAGEPNFPLAPTGKTRQHNFFVGGGAFWRF
Ga0306921_1183839423300031912SoilPWVSFGGGFGHIGQNNQLIYGGTNPGKSTTSGVIEAGLGLDVKVWKKLSIRAGVRDFWAGQPDFPLAPTGKTRQHNYLVSGGAFWRF
Ga0306924_1137977613300032076SoilEAGVGLDVKVWRKLSIRFEARDFWAGQPDFPLAPTGETRQHNYFVAGGAFWRF
Ga0306924_1154359313300032076SoilGLDVKVWKKLSIRAGVRDFWAGQPDFPLAPTGKTRQHNYLVSGGAFWRF
Ga0311301_1050665033300032160Peatlands SoilFGHFSEGNTLAFGGPNPGKSTTNFVLQAGLGLDVRVWSRLHIRGQVRDFWSGEPDFPLAPTGKSRQHNFFVSGGAFWRF
Ga0307471_10125461013300032180Hardwood Forest SoilFGHISQNDQLIYGGTNPGKSTTSAVIEAGFGLDVKVWSKLSIRGEVRDFWAGQPDFPLAPTGNTRQHNYFVGGGALWRF
Ga0306920_10402633013300032261SoilVIEAGVGLDVKVWRKLSIRFEARDFWAGQPDFPLAPTGETRQHNYFVAGGAFWRF
Ga0335085_1179566823300032770SoilSTTGFALEGGFGLDVKIVRKIWIRGEVRDFWSGEPDLPLAPTGKSRQHNYLVGGGAFWRF
Ga0335085_1193025823300032770SoilVSIGGGFGHFSQSKNLDYGGPTNPGKNTTSGVLEAGFGLDVKVWRKLSARGEVRDFWSGEPDFPLAPTGKTRQHNFLVGGGVIWRF
Ga0335079_1236147913300032783SoilAGFGLDVKVWRKLSIRMDVRDFWAGEPDFPLAPTGKTRQHNFFVGGGAFWRF
Ga0335078_1153283223300032805SoilGVLQGGLGLDVKVWKRLYIRAEGRDFWSGEPDFPLAPTGKTRQHNYFVGGGAFWRF
Ga0335081_1055736323300032892SoilTNPGKSKTSAVIEAGFGLDVKVWRKLSIRMDVRDFWAGEPDFPLAPTGKTRQHNFFVGGGAFWRF
Ga0335081_1269058523300032892SoilSEGKNLDYGLTNPGKNTTSGVFEGGLGLDVKLAGNFLIRGQVRDFCSGEPDFPLAPTGKSRQHNYFVSGGVVWRF
Ga0335075_1158179023300032896SoilQGGVGLDVRILHRFYMRGEARDFWSGEPDYPLADTGKTRQHNYFVGGGIMWRF
Ga0335071_1204357513300032897SoilYGGDNTGKSTTNFTLEAGFGLDVKVWRKLSIRMDVRDFWSGEPDFPLAPTGKSRMHNFFVGGGGFWRF
Ga0335073_1085208723300033134SoilGSNPGNSSTTGVFEGGLGLDVKVTKRLYIRGQVRDFWSGEPNFPLADTGKTRQHNYFVSGGAYWRF
Ga0335077_1029941333300033158SoilAIEAGLGLDVKVTTRISMRGGVRDFWAGEPDFPLAPTGKTRQHNYFVFGGVFWRF
Ga0314866_029082_704_8443300033807PeatlandVKVWKKLSMRGEVRDFWSGEPDLPLAQTGKSRMHNFFVGGGAFWRF
Ga0314867_010205_2_1513300033808PeatlandGLDVRVWSRLSIRGQVRDFWSGEPDFPLAPTGKSRQHNFFVSGGAFWRF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.