Metagenome / Metatranscriptome Family F040295

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040295
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	52 residues
Representative Sequence	VSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVL
Number of Associated Samples	123
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.21 %
% of genes near scaffold ends (potentially truncated)	99.38 %
% of genes from short scaffolds (< 2000 bps)	84.57 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.605 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (17.901 % of family members)
Environment Ontology (ENVO)	Unclassified (22.840 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.975 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.56% β-sheet: 0.00% Coil/Unstructured: 58.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF13683	rve_3	3.09
PF01471	PG_binding_1	3.09
PF13248	zf-ribbon_3	1.23
PF04542	Sigma70_r2	1.23
PF01453	B_lectin	1.23
PF00939	Na_sulph_symp	1.23
PF00561	Abhydrolase_1	0.62
PF13185	GAF_2	0.62
PF00089	Trypsin	0.62
PF01527	HTH_Tnp_1	0.62
PF00171	Aldedh	0.62
PF13676	TIR_2	0.62
PF00069	Pkinase	0.62
PF00753	Lactamase_B	0.62
PF13700	DUF4158	0.62
PF07702	UTRA	0.62
PF13641	Glyco_tranf_2_3	0.62
PF13546	DDE_5	0.62
PF00656	Peptidase_C14	0.62
PF00211	Guanylate_cyc	0.62
PF04264	YceI	0.62
PF14559	TPR_19	0.62
PF13565	HTH_32	0.62
PF00535	Glycos_transf_2	0.62
PF13586	DDE_Tnp_1_2	0.62
PF13408	Zn_ribbon_recom	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.47
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	1.23
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.23
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	1.23
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.23
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.23
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.23
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.62
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.62
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.62
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.62
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.62
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
All Organisms	root	All Organisms	28.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
cellular organisms	root	All Organisms → cellular organisms	28.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22.84 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.81 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.62 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.47 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.47 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.23 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.62 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	2.47 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.23 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.23 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.23 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.47 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.23 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.23 %
Ferrithrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix	0.62 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	2.47 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.23 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.62 %
Ferrithrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix	0.62 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.60 %
Frankia sp. R82	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. R82	2.47 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.23 %
Actinomadura sp. ATCC 31491	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. ATCC 31491	0.62 %
Ferrithrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix	0.62 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.62 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.62 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003368\|JGI26340J50214_10174106	Not Available	535	Open in IMG/M
3300004152\|Ga0062386_101727380	Not Available	522	Open in IMG/M
3300005434\|Ga0070709_10334819	Not Available	1114	Open in IMG/M
3300005435\|Ga0070714_100112527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2412	Open in IMG/M
3300005436\|Ga0070713_100005261	All Organisms → cellular organisms → Bacteria	8826	Open in IMG/M
3300005436\|Ga0070713_101037782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300005437\|Ga0070710_10602887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300005437\|Ga0070710_11332514	Not Available	535	Open in IMG/M
3300005439\|Ga0070711_101804206	Not Available	537	Open in IMG/M
3300005456\|Ga0070678_101477959	Not Available	636	Open in IMG/M
3300005544\|Ga0070686_100933830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300006028\|Ga0070717_10083302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2689	Open in IMG/M
3300006028\|Ga0070717_10772669	Not Available	873	Open in IMG/M
3300006028\|Ga0070717_11282497	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300006173\|Ga0070716_100065693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2113	Open in IMG/M
3300006176\|Ga0070765_100475325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300006176\|Ga0070765_101282610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300006806\|Ga0079220_11575288	Not Available	568	Open in IMG/M
3300009011\|Ga0105251_10353655	Not Available	671	Open in IMG/M
3300009098\|Ga0105245_12169449	Not Available	609	Open in IMG/M
3300009177\|Ga0105248_10941081	Not Available	976	Open in IMG/M
3300009520\|Ga0116214_1033324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1858	Open in IMG/M
3300009524\|Ga0116225_1541991	Not Available	516	Open in IMG/M
3300009645\|Ga0116106_1138171	Not Available	781	Open in IMG/M
3300009672\|Ga0116215_1018139	Not Available	3305	Open in IMG/M
3300009672\|Ga0116215_1108094	Not Available	1245	Open in IMG/M
3300009672\|Ga0116215_1446712	Not Available	559	Open in IMG/M
3300009683\|Ga0116224_10406610	Not Available	648	Open in IMG/M
3300009698\|Ga0116216_10631591	Not Available	645	Open in IMG/M
3300010048\|Ga0126373_12023296	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300010152\|Ga0126318_10955815	Not Available	579	Open in IMG/M
3300010373\|Ga0134128_11598205	Not Available	717	Open in IMG/M
3300010379\|Ga0136449_100824725	Not Available	1527	Open in IMG/M
3300010379\|Ga0136449_102702712	Not Available	704	Open in IMG/M
3300010379\|Ga0136449_103006416	Not Available	658	Open in IMG/M
3300010379\|Ga0136449_103509963	Not Available	597	Open in IMG/M
3300010379\|Ga0136449_103687470	Not Available	579	Open in IMG/M
3300010396\|Ga0134126_10114012	Not Available	3309	Open in IMG/M
3300010396\|Ga0134126_11410901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	769	Open in IMG/M
3300012209\|Ga0137379_11520132	Not Available	570	Open in IMG/M
3300012362\|Ga0137361_11085290	Not Available	721	Open in IMG/M
3300014200\|Ga0181526_10994871	Not Available	527	Open in IMG/M
3300016371\|Ga0182034_10383230	Not Available	1149	Open in IMG/M
3300017926\|Ga0187807_1025989	Not Available	1810	Open in IMG/M
3300017926\|Ga0187807_1053026	Not Available	1258	Open in IMG/M
3300017936\|Ga0187821_10488550	Not Available	514	Open in IMG/M
3300017937\|Ga0187809_10292696	Not Available	598	Open in IMG/M
3300017955\|Ga0187817_10030367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3269	Open in IMG/M
3300017959\|Ga0187779_10543356	Not Available	773	Open in IMG/M
3300017959\|Ga0187779_11371338	Not Available	502	Open in IMG/M
3300017972\|Ga0187781_10832765	Not Available	670	Open in IMG/M
3300017995\|Ga0187816_10426839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300018001\|Ga0187815_10302256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300018009\|Ga0187884_10348877	Not Available	596	Open in IMG/M
3300018030\|Ga0187869_10422394	Not Available	635	Open in IMG/M
3300018033\|Ga0187867_10001301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21528	Open in IMG/M
3300018037\|Ga0187883_10217730	Not Available	978	Open in IMG/M
3300018038\|Ga0187855_10143335	Not Available	1427	Open in IMG/M
3300018040\|Ga0187862_10225581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1216	Open in IMG/M
3300018040\|Ga0187862_10611562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300018042\|Ga0187871_10019889	Not Available	4357	Open in IMG/M
3300018042\|Ga0187871_10456351	Not Available	707	Open in IMG/M
3300018046\|Ga0187851_10127750	Not Available	1556	Open in IMG/M
3300018058\|Ga0187766_10604929	Not Available	748	Open in IMG/M
3300018058\|Ga0187766_10786845	Not Available	663	Open in IMG/M
3300018058\|Ga0187766_11335896	Not Available	524	Open in IMG/M
3300018060\|Ga0187765_10771123	Not Available	638	Open in IMG/M
3300018085\|Ga0187772_10203989	Not Available	1329	Open in IMG/M
3300019082\|Ga0187852_1327333	Not Available	606	Open in IMG/M
3300019787\|Ga0182031_1202173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300020150\|Ga0187768_1102807	Not Available	652	Open in IMG/M
3300020581\|Ga0210399_11575636	Not Available	507	Open in IMG/M
3300021171\|Ga0210405_10696485	Not Available	785	Open in IMG/M
3300021384\|Ga0213876_10363811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. R82	769	Open in IMG/M
3300021401\|Ga0210393_10579790	Not Available	916	Open in IMG/M
3300021403\|Ga0210397_11114444	Not Available	613	Open in IMG/M
3300021420\|Ga0210394_11358301	Not Available	605	Open in IMG/M
3300021474\|Ga0210390_10996324	Not Available	685	Open in IMG/M
3300021560\|Ga0126371_10970322	Not Available	992	Open in IMG/M
3300025906\|Ga0207699_10068862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2156	Open in IMG/M
3300025906\|Ga0207699_10193159	Not Available	1375	Open in IMG/M
3300025927\|Ga0207687_11313641	Not Available	622	Open in IMG/M
3300025928\|Ga0207700_10833904	Not Available	825	Open in IMG/M
3300025928\|Ga0207700_11526496	Not Available	592	Open in IMG/M
3300025929\|Ga0207664_10452472	Not Available	1146	Open in IMG/M
3300025929\|Ga0207664_11418678	Not Available	615	Open in IMG/M
3300025933\|Ga0207706_11374405	Not Available	581	Open in IMG/M
3300026121\|Ga0207683_10730457	Not Available	918	Open in IMG/M
3300026294\|Ga0209839_10189009	Not Available	665	Open in IMG/M
3300026819\|Ga0207765_109762	Not Available	792	Open in IMG/M
3300027662\|Ga0208565_1002107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11002	Open in IMG/M
3300027662\|Ga0208565_1012779	Not Available	3280	Open in IMG/M
3300027825\|Ga0209039_10113303	Not Available	1153	Open in IMG/M
3300027854\|Ga0209517_10186687	Not Available	1292	Open in IMG/M
3300027986\|Ga0209168_10488405	Not Available	595	Open in IMG/M
3300028742\|Ga0302220_10210416	Not Available	723	Open in IMG/M
3300028747\|Ga0302219_10035233	Not Available	1870	Open in IMG/M
3300028773\|Ga0302234_10298101	Not Available	691	Open in IMG/M
3300028801\|Ga0302226_10164795	Not Available	958	Open in IMG/M
3300028877\|Ga0302235_10383788	Not Available	602	Open in IMG/M
3300028879\|Ga0302229_10189062	Not Available	944	Open in IMG/M
3300028879\|Ga0302229_10190551	Not Available	940	Open in IMG/M
3300028906\|Ga0308309_11043846	Not Available	707	Open in IMG/M
3300029910\|Ga0311369_10084253	All Organisms → cellular organisms → Bacteria	3274	Open in IMG/M
3300029943\|Ga0311340_10233813	Not Available	1812	Open in IMG/M
3300029943\|Ga0311340_10427675	Not Available	1207	Open in IMG/M
3300029943\|Ga0311340_10572591	Not Available	993	Open in IMG/M
3300029952\|Ga0311346_10957129	Not Available	697	Open in IMG/M
3300029993\|Ga0302304_10319761	Not Available	566	Open in IMG/M
3300030007\|Ga0311338_10048416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5691	Open in IMG/M
3300030007\|Ga0311338_10321335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. R82	1698	Open in IMG/M
3300030007\|Ga0311338_10422524	Not Available	1423	Open in IMG/M
3300030043\|Ga0302306_10044256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1770	Open in IMG/M
3300030053\|Ga0302177_10131288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1425	Open in IMG/M
3300030058\|Ga0302179_10375303	Not Available	626	Open in IMG/M
3300030058\|Ga0302179_10512213	Not Available	526	Open in IMG/M
3300030399\|Ga0311353_10724894	Not Available	856	Open in IMG/M
3300030524\|Ga0311357_10083042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3224	Open in IMG/M
3300030580\|Ga0311355_10154263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2464	Open in IMG/M
3300030580\|Ga0311355_10283102	Not Available	1677	Open in IMG/M
3300030706\|Ga0310039_10005873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7216	Open in IMG/M
3300030706\|Ga0310039_10127642	Not Available	1043	Open in IMG/M
3300030707\|Ga0310038_10029429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. ATCC 31491	3293	Open in IMG/M
3300030739\|Ga0302311_10202772	Not Available	1502	Open in IMG/M
3300030906\|Ga0302314_10742108	Not Available	994	Open in IMG/M
3300031233\|Ga0302307_10006838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6749	Open in IMG/M
3300031236\|Ga0302324_100771565	Not Available	1343	Open in IMG/M
3300031236\|Ga0302324_101181094	Not Available	1021	Open in IMG/M
3300031261\|Ga0302140_10621515	Not Available	807	Open in IMG/M
3300031525\|Ga0302326_12132360	Not Available	718	Open in IMG/M
3300031545\|Ga0318541_10603783	Not Available	614	Open in IMG/M
3300031708\|Ga0310686_105497946	Not Available	1282	Open in IMG/M
3300031708\|Ga0310686_112413879	Not Available	724	Open in IMG/M
3300031723\|Ga0318493_10112670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1377	Open in IMG/M
3300031747\|Ga0318502_10194241	Not Available	1172	Open in IMG/M
3300031765\|Ga0318554_10157584	Not Available	1290	Open in IMG/M
3300031770\|Ga0318521_10765880	Not Available	587	Open in IMG/M
3300031771\|Ga0318546_11079330	Not Available	564	Open in IMG/M
3300031778\|Ga0318498_10433961	Not Available	582	Open in IMG/M
3300031782\|Ga0318552_10379136	Not Available	721	Open in IMG/M
3300031797\|Ga0318550_10145533	Not Available	1137	Open in IMG/M
3300032001\|Ga0306922_10879763	Not Available	932	Open in IMG/M
3300032160\|Ga0311301_10112376	All Organisms → cellular organisms → Bacteria	5211	Open in IMG/M
3300032782\|Ga0335082_10883922	Not Available	756	Open in IMG/M
3300032783\|Ga0335079_10191501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2273	Open in IMG/M
3300032783\|Ga0335079_10220591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2096	Open in IMG/M
3300032783\|Ga0335079_12049263	Not Available	550	Open in IMG/M
3300032805\|Ga0335078_10216195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2645	Open in IMG/M
3300032805\|Ga0335078_10235425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. R82	2512	Open in IMG/M
3300032805\|Ga0335078_12711843	Not Available	504	Open in IMG/M
3300032828\|Ga0335080_11017326	All Organisms → cellular organisms → Bacteria → Terrabacteria group	843	Open in IMG/M
3300032828\|Ga0335080_12170551	Not Available	534	Open in IMG/M
3300032892\|Ga0335081_10848261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrithrix	1085	Open in IMG/M
3300032892\|Ga0335081_12052641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	608	Open in IMG/M
3300032954\|Ga0335083_10413669	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1149	Open in IMG/M
3300032955\|Ga0335076_10126203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2480	Open in IMG/M
3300032955\|Ga0335076_10362390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. R82	1335	Open in IMG/M
3300033004\|Ga0335084_10893679	Not Available	899	Open in IMG/M
3300033134\|Ga0335073_11530686	Not Available	641	Open in IMG/M
3300033290\|Ga0318519_10193843	Not Available	1156	Open in IMG/M
3300034163\|Ga0370515_0114696	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300034199\|Ga0370514_106496	Not Available	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.06%
Host-Associated	Host-Associated	4.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.25%
Aquatic	Environmental → Aquatic	14.81%
Plants	Host-Associated → Plants	4.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.11%
Peat	Environmental → Terrestrial → Peat	19.14%
Freshwater	Environmental → Aquatic → Freshwater	14.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.23%
Roots	Host-Associated → Plants → Roots	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.20%
Loam	Environmental → Terrestrial → Soil → Loam	13.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.47%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.23%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	17.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.64%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.23%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.23%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.62%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26340J50214_101741061	3300003368	Bog Forest Soil	LSWSDGGARTGPQEIGLIAKIAASNDNEAARRIYEKYHMDLL
Ga0062386_1017273801	3300004152	Bog Forest Soil	VSGDDTGARTGPHEIGLIADLAARKDEEAARRLYRKYRMELFR
Ga0070709_103348191	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDDSGARIGAHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHV
Ga0070714_1001125275	3300005435	Agricultural Soil	VSSDDSGARIGAHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHVLHD
Ga0070713_1000052617	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDDSGARIGAHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQ
Ga0070713_1010377822	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQ
Ga0070710_106028872	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDDSGARTGPHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHVLHD
Ga0070710_113325141	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSWSDSGARTGPHEIGLIAKIAARNDDDAARRLYRKYRMELFRFGVH
Ga0070711_1018042061	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VSGSDSGARTGPHEIGLIAKIAARNDDDAARRLYRKYRMELFRFGVH
Ga0070678_1014779592	3300005456	Miscanthus Rhizosphere	LAVSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAE
Ga0070686_1009338302	3300005544	Switchgrass Rhizosphere	VSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVLHDQ
Ga0070717_100833026	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAVSSDDSGARIGAHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQ
Ga0070717_107726691	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAVSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQ
Ga0070717_112824972	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSGGADVPWTDSGARTGPHEVGLLAQIAIRKDDDAARRIYR
Ga0070716_1000656931	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDDSGARTGPHEIGLIADLAAKKDEDAARRLYRKYRMELF
Ga0070765_1004753251	3300006176	Soil	VAWSDSGARTGPHEIGLIANIAARNDDDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQETFIKFC
Ga0070765_1012826101	3300006176	Soil	VSWDDSGVRTGPHEMGLIARIAAVSDEDAARRLYRKYQMELFRFGFHVLGNQGLAEEMVQETF
Ga0079220_115752882	3300006806	Agricultural Soil	VAWSDSGARTGPQEIRLIADLAAKKDEEAARRLCRKY
Ga0105251_103536552	3300009011	Switchgrass Rhizosphere	MSWSDSGARTGPHEIGLIAKIAARNDDDAARRLYRKYRMELFRFGVH
Ga0105245_121694491	3300009098	Miscanthus Rhizosphere	VSWSDSGARTGPHEIGLIGKIAAKNDDDAARRIYRKYRMELFRFGVH
Ga0105248_109410813	3300009177	Switchgrass Rhizosphere	LTVSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVL
Ga0116214_10333243	3300009520	Peatlands Soil	VSWTDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGV
Ga0116225_15419911	3300009524	Peatlands Soil	LAVSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFG
Ga0116106_11381712	3300009645	Peatland	VSWSDSGARTGPHEIGLIAKIAATSDEDAARRLYRKYHKELFRFGFHVLHDQGLAEEMV
Ga0116215_10181395	3300009672	Peatlands Soil	LGTAVPWSDSGAGTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVLH
Ga0116215_11080942	3300009672	Peatlands Soil	LAVSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVLH
Ga0116215_14467121	3300009672	Peatlands Soil	VDEGGAPTGPHEISLVAKIAARNDDDAARRLYRKYRMELFRFGVH
Ga0116224_104066102	3300009683	Peatlands Soil	VSWTDSGAPTGPQEIGLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDQGL
Ga0116216_106315912	3300009698	Peatlands Soil	VSWTDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDHGL
Ga0126373_120232961	3300010048	Tropical Forest Soil	MSLSDSGARTGPHEIGLIARIATRNDDDAARRFYRKYRVELFR
Ga0126318_109558152	3300010152	Soil	LAVSSDDSGARIGAHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHVLRDQGLAEEMVQETF
Ga0134128_115982052	3300010373	Terrestrial Soil	LAVSWSDSGARTGPHEIGLIAKIAAKSDDDAARRLYRKYRMELFRFGVHVLHDEG
Ga0136449_1008247251	3300010379	Peatlands Soil	VSWDDSGARTGPHEIGLIAKIAAVSDDDAARRLYRKY
Ga0136449_1027027121	3300010379	Peatlands Soil	VSWTDGGAPTGPQEIGLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDHGLAEEMVQET
Ga0136449_1030064162	3300010379	Peatlands Soil	VSWTDGGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLN
Ga0136449_1035099631	3300010379	Peatlands Soil	VSWTDSGAPTGPQEIGLIAKIAARNDDDAARRLYRKYRMEL
Ga0136449_1036874701	3300010379	Peatlands Soil	VSWTDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRME
Ga0134126_101140124	3300010396	Terrestrial Soil	LAVSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQE
Ga0134126_114109012	3300010396	Terrestrial Soil	LTVSSDDSGARTGPHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQE
Ga0137379_115201321	3300012209	Vadose Zone Soil	MNPQNLAGVGDAMSWSDSGARTGPHEIGLIAKIAARNDDDAARRLYRKYRMELFRFG
Ga0137361_110852901	3300012362	Vadose Zone Soil	VSWTDGGAPTGPHEISLVAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDHGLAEE
Ga0181526_109948711	3300014200	Bog	VSWTDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDHGLAEEMVQETF
Ga0182034_103832301	3300016371	Soil	VAWSDSGARTGPHEIGLIAKVAARNDDDAARRLYRKYRMELFRF
Ga0187807_10259894	3300017926	Freshwater Sediment	MSWSDSGVRTGPHEIGLIAKIAAKNDNDAARRLYRKYRMELFRFGVHVLRDQGLAEE
Ga0187807_10530263	3300017926	Freshwater Sediment	VSWSDSGVRTGPHEIGLIAKIAAKNDNDAARRLYRKYRMELFRFGVHVLRDQGLAEE
Ga0187821_104885501	3300017936	Freshwater Sediment	VSWTDGGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGVH
Ga0187809_102926961	3300017937	Freshwater Sediment	MSWSDSGVRTGPHEIGLIAKIAAKNDNDAARRLYRKYRMELFRFGVHV
Ga0187817_100303671	3300017955	Freshwater Sediment	MSWSDSGVRTGPHEIGLIAKIAAKNDNDAARRLYRKYR
Ga0187779_105433561	3300017959	Tropical Peatland	VGRQRARTGPHEISLIAGIAAASDDDAARRLYRKYQMELFRFGFHVL
Ga0187779_113713381	3300017959	Tropical Peatland	VSWSDSGARTGPHEIGLIAKIAARSDDDAARRIYRKYRMELFRFGVHVLHHQGWPERWRKRLHQVLPAG
Ga0187781_108327651	3300017972	Tropical Peatland	VSWTDSGAPTGPHEINLVARIAARNDDDAARRLYRKYRMELFRFGVHVLNDQGLAEEM
Ga0187816_104268392	3300017995	Freshwater Sediment	YVEHGWGVAVSWDDSGVRTGPHEIGLIAKIAAVSDDDAARRLYRKYRMELFRFGFHVLGNQGLAERVRPE
Ga0187815_103022561	3300018001	Freshwater Sediment	VSWSDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMEL
Ga0187884_103488771	3300018009	Peatland	VSWTDGGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDHGLAEEMVQETFIK
Ga0187869_104223941	3300018030	Peatland	VSWSDSGARTGPHEIGLIAKIAAKNDGVEARRLYRKYRMELFRFGFHVLHDQG
Ga0187867_1000130121	3300018033	Peatland	VSWSDSGARTGPHEIGLIAKIAAKNDGVEARRLYRKYRMELFRFGFHVLHDQRLAEEMV
Ga0187883_102177301	3300018037	Peatland	VSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYHMELFRFGFHVLHDQGIAEEMVQETFIKFC
Ga0187855_101433351	3300018038	Peatland	VSWTDSGAPTGPQEIGLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDQGLAEEMVQET
Ga0187862_102255811	3300018040	Peatland	VSWSDSGARTGPHEIGLIAKIAAKNDGVEARRLYRKYRMELFRFGFH
Ga0187862_106115621	3300018040	Peatland	VSWRDSGARTGPHEIRLIAKIAAKNDDDAARRLYRKYRMELFRFGFH
Ga0187871_100198891	3300018042	Peatland	VSWSDSGARTGPHEIGLIANIAAKNDDDAARRLYRKYHMELFRFGFHVLHDQGIAEEMVQETFIKF
Ga0187871_104563511	3300018042	Peatland	LAVSWSDSGARTGPHEIGLIAKIAARNDDDAARRLYRKYRMELFRFGFHVLHDQGIAEEMVQETFIK
Ga0187851_101277501	3300018046	Peatland	VSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFH
Ga0187766_106049291	3300018058	Tropical Peatland	VGRQRARTGPHEISLIAGIAAASDDDAARRLYRKYQMELFR
Ga0187766_107868452	3300018058	Tropical Peatland	VSWDDSGVRTGPHEIGLIAKIAAVSDDDAARRLYRKYRMELFRFGFHVLGNQGLA
Ga0187766_113358963	3300018058	Tropical Peatland	VSWTDSGAPTGPHEINLVARIAARNDDDAARRLYRKYRMELFRFGVHVL
Ga0187765_107711232	3300018060	Tropical Peatland	VSWSDSGARTGPHEIGLIAKIAARSDDDAARRIYRKYRMELFRFGVHVLGDQGLA
Ga0187772_102039891	3300018085	Tropical Peatland	MGGLAVSWSDSGARTGPHEMGLIANIAARNDDDAARRLYRKYRME
Ga0187852_13273331	3300019082	Peatland	VARGDSGARTGPHEIGLIARIASRNDPDEAARRLYRKYHME
Ga0182031_12021732	3300019787	Bog	VSWRDSGARTGPHEIRLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVLHDQGLAEEMVQ
Ga0187768_11028073	3300020150	Tropical Peatland	VSWSDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFG
Ga0210399_115756362	3300020581	Soil	VLWSDSGARTGPHEIGLIARIAARNDDDAARRLYRKYRVELFRFGVHVL
Ga0210405_106964852	3300021171	Soil	VSWSDSGARTGPHEIGLIANIAAKNDDDAARRLYRKYRMELF
Ga0213876_103638111	3300021384	Plant Roots	VSWSDSGARTGPHEIGLIAKIAARNDDDAARRLYHKYRMELF
Ga0210393_105797901	3300021401	Soil	MDGRLAVSWSDSGARTGPHEVGLIAKIATVSDDDAARRLY
Ga0210397_111144441	3300021403	Soil	VSWSDSGARTGPHEIGLIGKIAAKNDDDAARRIYRKYRMELFRFGVHVLHEQGLAEE
Ga0210394_113583011	3300021420	Soil	MGGGLAVSWSDSGARTGPHEIGLIANIAAKNDDDAARRLYRKYRMELFRFGFHVLHDQGLAEEM
Ga0210390_109963241	3300021474	Soil	VSWSDSGARTGPHEIGLIAQIAARNDDEAARRLYRKYRMELLRFGVHVLH
Ga0126371_109703221	3300021560	Tropical Forest Soil	VSWSDSGARTGPHEIGLIARIAAKNDDDAARRLYRKYRMELFRFGVHVLQEQGLAEEM
Ga0207699_100688623	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDDSGARTGPHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHVLH
Ga0207699_101931592	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDDSGARIGAHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGIHVL
Ga0207687_113136412	3300025927	Miscanthus Rhizosphere	LAVSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQETF
Ga0207700_108339041	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSWSDSGARTGPHEIGLIAKIAAVSDDDAARRLYRKYRMELFRFGFH
Ga0207700_115264962	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LAVSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVLHDQ
Ga0207664_104524721	3300025929	Agricultural Soil	VSSDDSGARIGAHEIGLIADLAAKKDEDAARRLYRKYRMELFRFGVHVLHDQG
Ga0207664_114186782	3300025929	Agricultural Soil	LAGSWSDSGARTGPHEIGLIGKIAAKNDDDAARRIYRKYRMELFRFGVHVLHEQGLAEEMVQETFVKFCRQA
Ga0207706_113744052	3300025933	Corn Rhizosphere	LAVSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRM
Ga0207683_107304572	3300026121	Miscanthus Rhizosphere	LAVSSDDSGARTGPHEIDLIADIAAKKDEDAARRLYRKYRMELFRFGVHVLHDQGLAEEMVQET
Ga0209839_101890092	3300026294	Soil	VSWSDSGARTGPHEIGLIANVAAANADDAARRLYRKYRMELFRFGFHVLHD
Ga0207765_1097621	3300026819	Tropical Forest Soil	VSWSDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLHDHGLAEEMVQETF
Ga0208565_100210713	3300027662	Peatlands Soil	VEHGWGLAVSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVLHD
Ga0208565_10127795	3300027662	Peatlands Soil	VPWSDSGAGTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVLHD
Ga0209039_101133031	3300027825	Bog Forest Soil	VSWTDSGAPTGPQEISLIAKIATRNDDDAARRLYRKYRMELFRFG
Ga0209517_101866871	3300027854	Peatlands Soil	VSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRK
Ga0209168_104884051	3300027986	Surface Soil	VSWGDSGAPTGPHEISLVAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDQGLAEEIVQETF
Ga0302220_102104162	3300028742	Palsa	VSWSDSGARTGPHEIGLITKIAAKKDDDAARRLYRKYRMELFRFGFHVLHDQGLAEEMVQ
Ga0302219_100352335	3300028747	Palsa	VTVSWDDSGARTGPHEIGLIAQIAATSDEDAARRIYRKYHKDLFRFGFHVLHDQGLAEETVQETFIK
Ga0302234_102981011	3300028773	Palsa	VTVSWDDSGARTGPHEIGLIAQIAATSDEDAARRIYRKYRKELFRFGFHVLHDQGLTEEM
Ga0302226_101647951	3300028801	Palsa	VSWTDGGAPTGPQEIGLIAKIAARNDDDAARRLYR
Ga0302235_103837882	3300028877	Palsa	VSWTDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELF
Ga0302229_101890621	3300028879	Palsa	LAVSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVLHDEGL
Ga0302229_101905511	3300028879	Palsa	VEHGWGLAVSWSDSGARTGPHEIGLIASIAAKNDDDAARRLYR
Ga0308309_110438462	3300028906	Soil	VSWDDSGARTGPHEMGLIANIAATSDDDAARRLYRKYRMELFR
Ga0311369_100842531	3300029910	Palsa	VSWSDSGARTGPHEIGLITKIAAKKDDDAARRLYRKYRMELFRF
Ga0311340_102338133	3300029943	Palsa	VSWSDSGARTGPHEIGLIASIAAKNDDDAARRLYRKYRMDL
Ga0311340_104276751	3300029943	Palsa	VAVPWRDSGARTGPHEIGLIARIASRNDPDEAVRRLYRKYHMDLFRFGA
Ga0311340_105725911	3300029943	Palsa	VEHGWGLAVSWSDSGARTGPHEIGLIANIAAKNDDDAARRLYRKYHMELFRFGFHVLHDQ
Ga0311346_109571292	3300029952	Bog	LNWVVVWVAVSWSDSGARTGPQEIGLIAGIVVRKDEDAARRIYRKYHMELFRFGVHVRRDHGLAEEMLRE
Ga0302304_103197611	3300029993	Palsa	VSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVLHDQG
Ga0311338_100484168	3300030007	Palsa	VSFSDSGARTGPHEIGLIARIASRNDPDEAARRLYRKYHMDLFRFGAHVLHDQGLA
Ga0311338_103213351	3300030007	Palsa	VSWEDSGARTGPHEIGLIANIAAKNDGDAARRLYRKYRMELFRFGFHVLHDQGLA
Ga0311338_104225242	3300030007	Palsa	VSWDDGGARTGPHEIGLIAKIAAVSDDDAARRLYRKYRME
Ga0302306_100442561	3300030043	Palsa	VGLAVSCDDSGARTGPHEIGLIAKIAAVSDDDAARRLYRK
Ga0302177_101312881	3300030053	Palsa	VTVSWDDNGARTGPHEIGLIAKIAAASDEDAARRL
Ga0302179_103753031	3300030058	Palsa	VSWSDSGARTGPHEIGLIASIAAKNDDDAARRLYRKYHMELFRFGFHVLHDQGIAEEMVQETFIKF
Ga0302179_105122131	3300030058	Palsa	VGLAVSCDDSGARTGPHEIGLIAKIAAVSDDDAARRLY
Ga0311353_107248941	3300030399	Palsa	VTVSWDDDGARTGPHEIGLIAQIAATSDEDAARRIYRKYHKDLFRFGFHVLHDQGLA
Ga0311357_100830424	3300030524	Palsa	VAVPWRDSGARTGPHEIGLIARIASRNDPDEAVRRLYRKYHLDLFRFGAHVLHDQGLAEE
Ga0311355_101542631	3300030580	Palsa	VSWSDSEARTGPHEIGLIAKIAAKNDDDAARRLYRKYH
Ga0311355_102831021	3300030580	Palsa	VSWSDSGARTGPHEIGLIASIAAKNDDDAARRLYR
Ga0310039_100058731	3300030706	Peatlands Soil	VSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFR
Ga0310039_101276421	3300030706	Peatlands Soil	VPWSDSGAGTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFR
Ga0310038_100294294	3300030707	Peatlands Soil	VSWSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGFHVL
Ga0302311_102027721	3300030739	Palsa	VSWSDSEARTGPHEIGLIAKIAAKNDDDAARRLYRK
Ga0302314_107421081	3300030906	Palsa	VEHGWGLAVSWSDSGARTGPHEIGLIASIAAKNDDDAARRLYRKYRMDVFRFGFHVLHDEGL
Ga0302307_100068381	3300031233	Palsa	VSWSDSEARTGPHEIGLIAKIAAKNDDDAARRLYRKYHRELFRFGFHVLHDEG
Ga0302324_1007715651	3300031236	Palsa	VTVSWDDSGARTGPHEIGLIAQIAATSDEDAARRIYRKYRKELFRFGFHVL
Ga0302324_1011810942	3300031236	Palsa	VEHGWGLAVSWSDSGARTGPHEIGLIASIAAKNDDDAARRLYRKYHMELFRFGFHVLHDQ
Ga0302140_106215152	3300031261	Bog	LNWVVVWVAVSWSDSGARTGPQEIGLIAGIVVRKDEDAARRIYRKYHMELFRFGVHVRRDHGLAEEMLRETFMKFCRQAKNYDP
Ga0302326_121323601	3300031525	Palsa	VSWSDSGARTGPHEIGLIARIAAVGDDRAARRLYRKYHMELFRFGFHVLHDQGLAEEMVLETFI
Ga0318541_106037832	3300031545	Soil	VSWTDSGPPTGPHEINLVARIAARNDDDAARRLYRK
Ga0310686_1054979462	3300031708	Soil	VSWTDGGAPTGPQEISLIAKIAARNDDDAARRLYR
Ga0310686_1124138792	3300031708	Soil	VSWTDSGAPTGPQEIGLIAKIAARNDDDAARRLYRKYRMELFRF
Ga0318493_101126701	3300031723	Soil	VSWTDSGPPTGPHEINLVARIAARNDDDAARRLYRKYRMELFRFG
Ga0318502_101942414	3300031747	Soil	VAWSDSGARTGPHEIGLIAKVAARNDDDAARRLYRKYRMELF
Ga0318554_101575841	3300031765	Soil	VSWTDSGPPTGPHEINLVARIAARNDDDAARRLYRKYRMELFRFGVHVLND
Ga0318521_107658802	3300031770	Soil	VSWTDSGPPTGPHEINLVARIAARNDDDAARRLYRKYRMELFRFGVHVLNDQGLAEEMVQ
Ga0318546_110793302	3300031771	Soil	VAWSDSGARTGPHEIGLIAKVAARNDDDAARRLYRKYRMELFRFGVHVLRERGLAEEMVQ
Ga0318498_104339612	3300031778	Soil	VSWTDSGPPTGPHEINLVARIAARNDDDAARRLYRKYRME
Ga0318552_103791362	3300031782	Soil	LAVAWSDSGARTGPHEIGLIAKVAARNDDDAARRLYRKYRMELFRFGVHVLRERGLAEEMVQE
Ga0318550_101455331	3300031797	Soil	VAWSDSGARTGPHEIGLIAKVAARNDDDAARRLYRKY
Ga0306922_108797632	3300032001	Soil	LAVAWSDSGARTGPHEIGLIAKVAARNDDDAARRLYRKYRMELFRFG
Ga0311301_101123761	3300032160	Peatlands Soil	LNWVVVRVAGPWSDSGARTGPQETGLTAGIVVRKDEDAARRIYRTYHMELFRFGVHARRDHGLAEEMVRGTFMKFCRQAKNYDPG
Ga0335082_108839221	3300032782	Soil	VSCSDSGARTGPHEIGLIAKIAARSDDDAARRIYRKYRMELFR
Ga0335079_101915013	3300032783	Soil	VSWTDSGAPTGPHEINLVARIAARNDDDAARRLYRKY
Ga0335079_102205913	3300032783	Soil	VSWTDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLNDHGLAEEMVQETFIKF
Ga0335079_120492631	3300032783	Soil	VSWSDSGAQTGPHEIGLIAQIAARNDDEAARRLYLKYH
Ga0335078_102161951	3300032805	Soil	VSWTDSGAPTGPQEISLIAKIAARNDDDATRRLYRKYRMELFRF
Ga0335078_102354254	3300032805	Soil	VSWTDSGARIGSHEIGLIARFADRSDDDAARRLYRKYRM
Ga0335078_127118431	3300032805	Soil	VAWDDTGARTGPHEIGLIAKIAARKDEDAARRLCRKYRMGLFRFGVHVL
Ga0335080_110173261	3300032828	Soil	MSLSDSGARTGTHEIGLIARIATRNDDDAARRLYRKYRMELFRFGVHVLRERGLAEEMVQAT
Ga0335080_121705511	3300032828	Soil	MSWSDSGARTGPHEIGLIAQIAARNDDDAARRLYRKYRMELFRFGVHVLHDQGLADE
Ga0335081_108482611	3300032892	Soil	VAVSRSDSGARTGPHEIGLIAKIAAKNDDDAARRLYRKYRMELFRFGV
Ga0335081_120526411	3300032892	Soil	LAVSWSDSGARTGPHEIGLIANIAAKKDDDAARRIYRKYRMELFR
Ga0335083_104136693	3300032954	Soil	VSWSDSGARTGPHEIGLIADLAAKKDEEAARRLYRKYRMELFRFGVHV
Ga0335076_101262033	3300032955	Soil	VSWNDSGAPTGPQEISLIAKIAARNDDDAARRLYRKYRMELFRFGVHVLHDHGLAEEMVQETFIKFC
Ga0335076_103623901	3300032955	Soil	VSWTDSGARIGSHEIGLIARFADRSDDDAARRLYRKYRMEPVRFGVYVPYDQGLAGEMVQESLIRFCPHASSNATGRGP
Ga0335084_108936792	3300033004	Soil	VSWSDSGARTGPHEIGLIAKIAARSDDDAARRIYRKYRMELFRFAYMCCTTRG
Ga0335073_115306861	3300033134	Soil	VSWDDSGARTGPHEIGLIAKIAATSDEDAARRLYRKYRKELFRFGFHVLHDQGLAEEMMQ
Ga0318519_101938434	3300033290	Soil	VAWSDSGARTGPHEIGLIAKVAARNDDDAARRLYRKYRMELFRFGVHVLRERGLAEE
Ga0370515_0114696_3_152	3300034163	Untreated Peat Soil	MTVSWDDSGARTGPHEIGLIAKIAATSDEDAARRLYRKYRKELFRFGFHV
Ga0370514_106496_3_197	3300034199	Untreated Peat Soil	VSWSDSGARTGPHEIGLIASIAAKNDDDAARRLYRKYHMELFRFGFHVLHDQGIAEEMVQETFIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040295

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences