Metagenome / Metatranscriptome Family F040289

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040289
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	70 residues
Representative Sequence	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Number of Associated Samples	125
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.58 %
% of genes near scaffold ends (potentially truncated)	42.59 %
% of genes from short scaffolds (< 2000 bps)	80.25 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.765 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.753 % of family members)
Environment Ontology (ENVO)	Unclassified (38.272 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.494 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.00% β-sheet: 20.00% Coil/Unstructured: 71.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF00271	Helicase_C	27.78
PF13302	Acetyltransf_3	3.70
PF08818	DUF1801	1.85
PF03473	MOSC	1.85
PF12850	Metallophos_2	1.23
PF00561	Abhydrolase_1	1.23
PF11258	DUF3048	1.23
PF01988	VIT1	1.23
PF08327	AHSA1	1.23
PF01738	DLH	1.23
PF05977	MFS_3	1.23
PF12680	SnoaL_2	1.23
PF06224	HTH_42	1.23
PF13191	AAA_16	1.23
PF07366	SnoaL	0.62
PF01545	Cation_efflux	0.62
PF02518	HATPase_c	0.62
PF12840	HTH_20	0.62
PF13964	Kelch_6	0.62
PF11716	MDMPI_N	0.62
PF02776	TPP_enzyme_N	0.62
PF01926	MMR_HSR1	0.62
PF08031	BBE	0.62
PF07931	CPT	0.62
PF08450	SGL	0.62
PF00583	Acetyltransf_1	0.62
PF03795	YCII	0.62
PF02604	PhdYeFM_antitox	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.85
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.85
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.85
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	1.23
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.23
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	1.23
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	1.23
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.62
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.62
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.62
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.62
COG3896	Chloramphenicol 3-O-phosphotransferase	Defense mechanisms [V]	0.62
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.62
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.62
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.62
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.77 %
Unclassified	root	N/A	1.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.77 %
Unclassified	root	N/A	1.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.77 %
Unclassified	root	N/A	1.23 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.23 %
Unclassified	root	N/A	1.23 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	51.23 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.23 %
Unclassified	root	N/A	1.23 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	49.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.23 %
Unclassified	root	N/A	1.23 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	48.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.23 %
Unclassified	root	N/A	1.23 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.62 %
Chloroflexi bacterium 13_1_40CM_3_70_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_3_70_6	0.62 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	48.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.23 %
Unclassified	root	N/A	1.23 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Chloroflexi bacterium 13_1_40CM_3_70_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_3_70_6	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig10423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1909929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	640	Open in IMG/M
3300000956\|JGI10216J12902_102093862	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300001538\|A10PFW1_10002613	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300001661\|JGI12053J15887_10522264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300002561\|JGI25384J37096_10068151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1312	Open in IMG/M
3300002908\|JGI25382J43887_10048108	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300002908\|JGI25382J43887_10363598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300002911\|JGI25390J43892_10030269	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300004463\|Ga0063356_100153661	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300004463\|Ga0063356_101777076	Not Available	925	Open in IMG/M
3300005166\|Ga0066674_10244241	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005166\|Ga0066674_10429642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300005171\|Ga0066677_10550366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	660	Open in IMG/M
3300005172\|Ga0066683_10272491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1051	Open in IMG/M
3300005172\|Ga0066683_10360280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	902	Open in IMG/M
3300005176\|Ga0066679_10005611	All Organisms → cellular organisms → Bacteria	5812	Open in IMG/M
3300005176\|Ga0066679_10536772	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005180\|Ga0066685_10539156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	805	Open in IMG/M
3300005180\|Ga0066685_10546725	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005186\|Ga0066676_10136765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1527	Open in IMG/M
3300005186\|Ga0066676_10270111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1116	Open in IMG/M
3300005187\|Ga0066675_10535284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	878	Open in IMG/M
3300005437\|Ga0070710_11534083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300005440\|Ga0070705_100063482	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300005440\|Ga0070705_100172702	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300005444\|Ga0070694_100275272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1281	Open in IMG/M
3300005445\|Ga0070708_100049560	All Organisms → cellular organisms → Bacteria	3716	Open in IMG/M
3300005446\|Ga0066686_10019680	All Organisms → cellular organisms → Bacteria	3757	Open in IMG/M
3300005446\|Ga0066686_10212146	All Organisms → cellular organisms → Bacteria → Proteobacteria	1300	Open in IMG/M
3300005446\|Ga0066686_10386421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	956	Open in IMG/M
3300005468\|Ga0070707_100006009	All Organisms → cellular organisms → Bacteria	11329	Open in IMG/M
3300005471\|Ga0070698_101184128	Not Available	713	Open in IMG/M
3300005536\|Ga0070697_100151858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1952	Open in IMG/M
3300005536\|Ga0070697_100438150	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300005536\|Ga0070697_101098329	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300005540\|Ga0066697_10531344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	662	Open in IMG/M
3300005545\|Ga0070695_100355220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1099	Open in IMG/M
3300005552\|Ga0066701_10152174	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300005554\|Ga0066661_10006915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5428	Open in IMG/M
3300005555\|Ga0066692_10611410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	683	Open in IMG/M
3300005558\|Ga0066698_10055790	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300005559\|Ga0066700_10050039	All Organisms → cellular organisms → Bacteria	2563	Open in IMG/M
3300005578\|Ga0068854_100055462	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300005578\|Ga0068854_102244893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300006049\|Ga0075417_10059874	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300006173\|Ga0070716_100243735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1220	Open in IMG/M
3300006797\|Ga0066659_10092760	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300006876\|Ga0079217_11374348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300006894\|Ga0079215_10103818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1258	Open in IMG/M
3300006894\|Ga0079215_11028537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300006918\|Ga0079216_10856570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	677	Open in IMG/M
3300006918\|Ga0079216_10931372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	660	Open in IMG/M
3300007004\|Ga0079218_10101040	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300007004\|Ga0079218_10332015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1255	Open in IMG/M
3300007004\|Ga0079218_12044432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300007258\|Ga0099793_10325228	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300009012\|Ga0066710_100792212	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300009012\|Ga0066710_101746810	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009012\|Ga0066710_102078265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	836	Open in IMG/M
3300009012\|Ga0066710_102728955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	703	Open in IMG/M
3300009090\|Ga0099827_10370263	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1221	Open in IMG/M
3300009090\|Ga0099827_10526963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1016	Open in IMG/M
3300009137\|Ga0066709_100221443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2506	Open in IMG/M
3300009137\|Ga0066709_103317218	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009162\|Ga0075423_12421519	All Organisms → cellular organisms → Bacteria → Terrabacteria group	572	Open in IMG/M
3300010333\|Ga0134080_10592032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300010336\|Ga0134071_10108006	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300010364\|Ga0134066_10085236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	889	Open in IMG/M
3300010399\|Ga0134127_11465860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	754	Open in IMG/M
3300011987\|Ga0120164_1022254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1032	Open in IMG/M
3300011996\|Ga0120156_1099883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300012010\|Ga0120118_1000471	All Organisms → cellular organisms → Bacteria	15475	Open in IMG/M
3300012198\|Ga0137364_10032294	All Organisms → cellular organisms → Bacteria	3352	Open in IMG/M
3300012198\|Ga0137364_10522856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	892	Open in IMG/M
3300012198\|Ga0137364_10571260	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300012199\|Ga0137383_10371113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1048	Open in IMG/M
3300012203\|Ga0137399_11525905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300012208\|Ga0137376_10001151	All Organisms → cellular organisms → Bacteria	14293	Open in IMG/M
3300012209\|Ga0137379_10981507	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012378\|Ga0134025_1204237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300012409\|Ga0134045_1026218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300012409\|Ga0134045_1213937	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012530\|Ga0136635_10245048	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012582\|Ga0137358_10952524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	559	Open in IMG/M
3300012668\|Ga0157216_10019099	All Organisms → cellular organisms → Bacteria	3598	Open in IMG/M
3300012917\|Ga0137395_11067665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300012927\|Ga0137416_11504378	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300012927\|Ga0137416_11868167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300014056\|Ga0120125_1089010	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300014154\|Ga0134075_10430036	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300014154\|Ga0134075_10459466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_3_70_6	567	Open in IMG/M
3300014157\|Ga0134078_10009359	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300015358\|Ga0134089_10253872	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300015372\|Ga0132256_100571841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1244	Open in IMG/M
3300015373\|Ga0132257_102391764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300015374\|Ga0132255_102590598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300017654\|Ga0134069_1373022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	514	Open in IMG/M
3300017656\|Ga0134112_10150264	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300018027\|Ga0184605_10001601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7364	Open in IMG/M
3300018028\|Ga0184608_10009193	All Organisms → cellular organisms → Bacteria	3324	Open in IMG/M
3300018031\|Ga0184634_10332893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	696	Open in IMG/M
3300018054\|Ga0184621_10233943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300018061\|Ga0184619_10020605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2706	Open in IMG/M
3300018061\|Ga0184619_10084109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1415	Open in IMG/M
3300018066\|Ga0184617_1129411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300018071\|Ga0184618_10036596	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300018078\|Ga0184612_10616775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300018431\|Ga0066655_10094590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1660	Open in IMG/M
3300018431\|Ga0066655_11117546	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300018433\|Ga0066667_10508884	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300018468\|Ga0066662_10283594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1379	Open in IMG/M
3300018482\|Ga0066669_11856002	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300019279\|Ga0184642_1198292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	754	Open in IMG/M
3300019868\|Ga0193720_1043455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300019878\|Ga0193715_1043767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	966	Open in IMG/M
3300019885\|Ga0193747_1108649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300021344\|Ga0193719_10007135	All Organisms → cellular organisms → Bacteria	4633	Open in IMG/M
3300021344\|Ga0193719_10014185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3370	Open in IMG/M
3300022756\|Ga0222622_10503426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	866	Open in IMG/M
3300025910\|Ga0207684_11688824	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300025922\|Ga0207646_10001601	All Organisms → cellular organisms → Bacteria	27618	Open in IMG/M
3300025922\|Ga0207646_10004993	All Organisms → cellular organisms → Bacteria	14151	Open in IMG/M
3300026041\|Ga0207639_11499686	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300026295\|Ga0209234_1045939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1661	Open in IMG/M
3300026296\|Ga0209235_1150589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	925	Open in IMG/M
3300026296\|Ga0209235_1152401	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300026297\|Ga0209237_1035065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2690	Open in IMG/M
3300026301\|Ga0209238_1141360	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300026309\|Ga0209055_1018570	All Organisms → cellular organisms → Bacteria	3392	Open in IMG/M
3300026318\|Ga0209471_1132900	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300026318\|Ga0209471_1183292	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300026327\|Ga0209266_1021221	All Organisms → cellular organisms → Bacteria	3594	Open in IMG/M
3300026524\|Ga0209690_1047628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1937	Open in IMG/M
3300026524\|Ga0209690_1190941	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300026532\|Ga0209160_1241252	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300026537\|Ga0209157_1006673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8257	Open in IMG/M
3300026542\|Ga0209805_1260634	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300027360\|Ga0209969_1044119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	695	Open in IMG/M
3300027678\|Ga0209011_1146441	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300027695\|Ga0209966_1137399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300027738\|Ga0208989_10230598	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300027882\|Ga0209590_11009328	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300027886\|Ga0209486_10563092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300027886\|Ga0209486_11092555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300028713\|Ga0307303_10130115	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300028720\|Ga0307317_10287751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300028784\|Ga0307282_10069932	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300028784\|Ga0307282_10343648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300028791\|Ga0307290_10118287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	969	Open in IMG/M
3300028792\|Ga0307504_10049559	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300028793\|Ga0307299_10020299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2381	Open in IMG/M
3300028807\|Ga0307305_10383519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300028819\|Ga0307296_10025603	All Organisms → cellular organisms → Bacteria	3114	Open in IMG/M
3300028828\|Ga0307312_10840392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	608	Open in IMG/M
3300028878\|Ga0307278_10258207	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300028881\|Ga0307277_10142900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1035	Open in IMG/M
3300028881\|Ga0307277_10249494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300031058\|Ga0308189_10509353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	519	Open in IMG/M
3300031095\|Ga0308184_1023333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	679	Open in IMG/M
3300031820\|Ga0307473_10163938	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300034681\|Ga0370546_023606	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.59%
Host-Associated	Host-Associated	7.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.57%
Aquatic	Environmental → Aquatic	7.41%
Plants	Host-Associated → Plants	7.41%
Unclassified	Environmental → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.57%
Sediment	Environmental → Aquatic → Sediment	6.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%
Freshwater	Environmental → Aquatic → Freshwater	1.23%
Unclassified	Environmental → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.84%
Loam	Environmental → Terrestrial → Soil → Loam	11.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Ice	Environmental → Aquatic → Freshwater → Ice	0.62%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.09%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.23%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012378	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031095	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_158 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_01357600	2124908016		VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
ICChiseqgaiiDRAFT_19099291	3300000033	Soil	MGRKKRVGFADLQATHAELDRGELRCPECKRSVSDADGLKFVPAFGASESSLATLKCPRCRTAISIRFIPAT*
JGI10216J12902_1020938621	3300000956	Soil	DLQATHAELGRGELRCPECKRNVSEADGLRYVPTLGQAVSSLATLNCPRCRTTISIRFVEAV*
A10PFW1_100026131	3300001538	Permafrost	VGRKKRVGFADLQATHGELDRGELRCPECKRSVAEADGLRFVPALGKIESSLATLSCPRCRTMISIRFIAAH*
JGI12053J15887_105222642	3300001661	Forest Soil	LGRKKRVGFADLQATHAELRRGELRCPECKRSVSEADGLRFVPALGQAEPSLATLKCPRCRTTISIRFTAAA*
JGI25384J37096_100681511	3300002561	Grasslands Soil	VGRKKRVGFADLQATQAQIDRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT*
JGI25382J43887_100481082	3300002908	Grasslands Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
JGI25382J43887_103635982	3300002908	Grasslands Soil	DRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT*
JGI25390J43892_100302691	3300002911	Grasslands Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH*
Ga0063356_1001536611	3300004463	Arabidopsis Thaliana Rhizosphere	MGRKKRVGFADLQATHAELDRGELRCPECKRSVSDADGLKFVPAFGDSESSLATLKCPRCRTAISIRFIPAT*
Ga0063356_1017770761	3300004463	Arabidopsis Thaliana Rhizosphere	MGCYMGRKKKRVGFADLQATRAELERGELRCPECKRTVSDADGLRFVPTLGQSESSLATLNCPRCRTTISIRFVEAV*
Ga0066674_102442411	3300005166	Soil	VGRKKRIGFADLQATQAELAGGELRCPECKRKLSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT*
Ga0066674_104296422	3300005166	Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAHYRG*
Ga0066677_105503662	3300005171	Soil	RKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0066683_102724911	3300005172	Soil	FADLQATHAELDRGELRCPECKRSVSDSDGLRFVPALGQTESSLATLSCPRCRTMISIRFIPAR*
Ga0066683_103602802	3300005172	Soil	MGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0066679_100056116	3300005176	Soil	MGRKKRIGFADLQATRAEFERRELRCPECKRKLSEEDAPKLVTTLGQSQPTLATLSCPRCRTMISIRFVEAAAGESPDRS*
Ga0066679_105367722	3300005176	Soil	VGRKKRIGFADLQATQAELDRGELRCPECKRKVSEADGLRFVSAFGEAAPSLAQLSCPRCRTMISIRFIAAT*
Ga0066685_105391562	3300005180	Soil	GFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0066685_105467251	3300005180	Soil	MGRKKRIGFADLQATHAELDRGELRCPECKRSVSDSDGLRFVPALGQTESSLATLSCPRCRTMISIRFIPAR*
Ga0066676_101367652	3300005186	Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFVAAH*
Ga0066676_102701112	3300005186	Soil	MGRKKRIGFADLQATHAELDRGELRCPECKRSVSDADGLRFVPALGQTESSLATLSCTRCRTMISIRFIPAR*
Ga0066675_105352841	3300005187	Soil	KKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0070710_115340831	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFVAAH*
Ga0070705_1000634822	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0070705_1001727022	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAR*
Ga0070694_1002752722	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRVGFADLQATHAELRRGELRCPECKRSVSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFVAAV*
Ga0070708_1000495606	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH*
Ga0066686_100196802	3300005446	Soil	MGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGHTESSLATLSCPRCRTMISIRFVAAH*
Ga0066686_102121463	3300005446	Soil	LQATHGELDRGELRCPECKRSVAEADGLRFVPALGQAESSLATLSCPRCRTMISIRFIAAH*
Ga0066686_103864211	3300005446	Soil	MCRAASRGLLFCGPMEGAPLVGRKKRVGFADLQATQAQIDRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT*
Ga0070707_10000600913	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRVGFADLQATHGELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0070698_1011841281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SGRMGCYMGRKKKRVGFADLQATRAELERGELRCPECKRTVSDADGLRFVPTLGQSESSLATLNCPRCRTTISIRFVEAV*
Ga0070697_1001518584	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKSVGFADLQATHAELRRGELRCPECKRSVSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFVAAV*
Ga0070697_1004381502	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRIGFADLQATQAEFAGGELRCPGCKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT*
Ga0070697_1010983291	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGRKKRVGFADLQATQAQIDRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT*
Ga0066697_105313442	3300005540	Soil	IGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH*
Ga0070695_1003552202	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	CHVGRKKRVGFADLQATHAELRRGELRCPECKRSVSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFVAAV*
Ga0066701_101521741	3300005552	Soil	VGRKKRIGFADLQATQAELARGELRCPECKRKLSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT*
Ga0066661_100069154	3300005554	Soil	VGIEITQPAEGAELVGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0066692_106114102	3300005555	Soil	VGRKKRIGFADLQATQAEFAGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMIGIRVIAAT*
Ga0066698_100557901	3300005558	Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRKVSEADGLRFVPAFGQAEPSLAALSCPRCRTMISIRLIAAT*
Ga0066700_100500391	3300005559	Soil	KKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0068854_1000554621	3300005578	Corn Rhizosphere	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFI
Ga0068854_1022448932	3300005578	Corn Rhizosphere	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFVAAH*
Ga0075417_100598742	3300006049	Populus Rhizosphere	VGRKKRIGFADLQATHAELDRGELRCPECKRSVSDADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAR*
Ga0070716_1002437352	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMNCPRCRTMISIRFVAAH*
Ga0066659_100927601	3300006797	Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTM
Ga0079217_113743481	3300006876	Agricultural Soil	VARKKRVGFADLKATHAELRRGELRCPECKRSVSEADGLRFVPVFGQTESSLATLNCPRCRTTISIRLVAAA*
Ga0079215_101038183	3300006894	Agricultural Soil	MGCNVGRKKRVGFADLKATHAELRRGDLRCPECKRSVSEADGLRFVPAFGQTESSLATLSCPRCRTTISIRLITAA*
Ga0079215_110285371	3300006894	Agricultural Soil	MGCNVARKKRVGFADLKATHAQLQRGELRCPECKRTVSEADGLRFVPAFGQTESSLATLSCPRCRTTISIRLIAVA*
Ga0079216_108565702	3300006918	Agricultural Soil	VGKKKRVGFADLKATHAELRRGDLRCPECKRSVSEADGLRFVPAFGQTESSLATLNCPRCRTTISIRLVAAA*
Ga0079216_109313721	3300006918	Agricultural Soil	MGCNVARKKRVGFADLKATHAQLQRGELRCPECKRTVSEADGLRFVPAFGQTESSLATLSCPRCRTTISIRL
Ga0079218_101010404	3300007004	Agricultural Soil	MGCNVGKKKRVGFADLKATHAELRRGDLRCPECKRSVSEADGLRFVPAFGQTESSLATLSCPRCRTTISIRLITAA*
Ga0079218_103320152	3300007004	Agricultural Soil	VGRKKKRVGFADLQATHAELARGELRCPECKRNVSEADGLRYVPTLGQAESSLATLNCPRCRTTISIRF
Ga0079218_120444322	3300007004	Agricultural Soil	MGCNVGRKKRVGFADLKATHAELQRGELRCPECKRSVSEADGLRFVPVFGQTESSLATLNCPRCRTTISIRLVAAA*
Ga0099793_103252282	3300007258	Vadose Zone Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQVESSLATLSCPRCRTMISIRFVAAH*
Ga0066710_1007922122	3300009012	Grasslands Soil	VGRKKRIGFADLQATQAEFAGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT
Ga0066710_1017468101	3300009012	Grasslands Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRC
Ga0066710_1020782652	3300009012	Grasslands Soil	RIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH
Ga0066710_1027289551	3300009012	Grasslands Soil	RKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0099827_103702633	3300009090	Vadose Zone Soil	IGFADLQATRAEFGRGELRCPECKRSLSGDDGLKLVTALGQSQATLATLKCPRCRTMMSIRFVAAPSGEIPGDQ*
Ga0099827_105269633	3300009090	Vadose Zone Soil	AELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0066709_1002214435	3300009137	Grasslands Soil	RIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH*
Ga0066709_1033172182	3300009137	Grasslands Soil	VGRKKRIGFADLQATQAEFAGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSRPRCRTMISIRFVAAT*
Ga0075423_124215191	3300009162	Populus Rhizosphere	MESGDEMGRKKRVGFADLRTTHAELGRGELRCPECRRSVSDADGLKYVPALGQTESSLATLDCPRCR
Ga0134080_105920322	3300010333	Grasslands Soil	DRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0134071_101080063	3300010336	Grasslands Soil	MEGAPLVGRKKRVGFADLQATQAQIDRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT*
Ga0134066_100852361	3300010364	Grasslands Soil	GFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH*
Ga0134127_114658601	3300010399	Terrestrial Soil	QATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFVAAH
Ga0120164_10222541	3300011987	Permafrost	VGRKKRVGFGDVQATHAELGRGELRCPQCHRSVSDADGLKFVPALGQSESSLATLNCPRCRTMLS
Ga0120156_10998831	3300011996	Permafrost	VGRKKRIGFADLQATHGELDRGELRCPECKRSVAEADGLRFVPALGQIESSLATLSCPRCRTMISIRFIAAH*
Ga0120118_10004717	3300012010	Permafrost	VGRKKRVGFADLQATHGELDRGELRCPECKRSVAEADGLRFVPALGQIESSLATLSCPRCRTMISIRFIAAH*
Ga0137364_100322941	3300012198	Vadose Zone Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISI
Ga0137364_105228562	3300012198	Vadose Zone Soil	AELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH*
Ga0137364_105712601	3300012198	Vadose Zone Soil	VGRKKRIGFADLQATQAEFEGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFVAAT*
Ga0137383_103711132	3300012199	Vadose Zone Soil	VGRKKRVGFADLQATHGELDRGELRCPECKRSVAEADGLRFVPALGQAESSLATLSCPRCRTMISIRFIAAH*
Ga0137399_115259051	3300012203	Vadose Zone Soil	RKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0137376_1000115116	3300012208	Vadose Zone Soil	DRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH*
Ga0137379_109815072	3300012209	Vadose Zone Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGHTESSLATLSCPRCRTMISIRFIAAH*
Ga0134025_12042372	3300012378	Grasslands Soil	VARKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH*
Ga0134045_10262182	3300012409	Grasslands Soil	MGRKKRIGFADLQATHAELDRGELRCPECKRSVSDADGLRFVPALGQTESSLATLSCPRCRTMISIRFIPAR*
Ga0134045_12139372	3300012409	Grasslands Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRC
Ga0136635_102450481	3300012530	Polar Desert Sand	MDARIGWCYLARKKRVGFADLEGTRADLGSGALKCPSCNRVVSDADGLRFVAALGQREPSLATLDCPRCRTMLS
Ga0137358_109525241	3300012582	Vadose Zone Soil	RKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQVESSLATLSCPRCRTMISIRFVAAH*
Ga0157216_100190994	3300012668	Glacier Forefield Soil	MGRKKRVGFADLEGTHAELGSGDLRCPECNRTLSEADGLKFVSALGQREPSLATVDCPRCRTMLTIRFIAAKESLS*
Ga0137395_110676651	3300012917	Vadose Zone Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQAESSLAPLSCPRCRTLIRIRFIAAHSPAGGSPIWTI*
Ga0137416_115043781	3300012927	Vadose Zone Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQVESSLATLSCPRC
Ga0137416_118681671	3300012927	Vadose Zone Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFVATH*
Ga0120125_10890102	3300014056	Permafrost	VGRKKRVGFGDVQATHAELGRGELRCPQCHRSVSDADGLKFVPALGQSESSLATLNCPR
Ga0134075_104300362	3300014154	Grasslands Soil	VGRKKRIGFADLQATQAEFAGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT*
Ga0134075_104594662	3300014154	Grasslands Soil	VGRKKKVGFADLQATHAELGRGELRCPECRRSVSDADGLKFVPAFGQSESSLATLDCPRC
Ga0134078_100093592	3300014157	Grasslands Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALRQTESSLATLSCPRCRTMISIRFIAAH*
Ga0134089_102538722	3300015358	Grasslands Soil	ELAGGELRCPECKRKLSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT*
Ga0132256_1005718412	3300015372	Arabidopsis Rhizosphere	VVAAIHAANSSHVIGIEWGCVEMGRKKRAGFADLQATHAELGRGELRCPECRRSVSDADELKFVPALGQSESSLATLKCPRCRTTISIRFIPAT*
Ga0132257_1023917641	3300015373	Arabidopsis Rhizosphere	MGRKKRAGFADLQATHAELGRGELRCPECRRSVSDADELKFVPALGQSESSLATLKCPRCRTTISIR
Ga0132255_1025905982	3300015374	Arabidopsis Rhizosphere	MGRKKRAGFADLQATHAELGRGELRCPECRRSVSDADELKFVPALGQSESSLATLKCPRCRTTISIRFIPAT*
Ga0134069_13730222	3300017654	Grasslands Soil	MGRKKRIGFADLQATHAELDRGELRCPECKRSVSDADGLRFVPALGQTESSLATISCPRCRTMISIRFIPAR
Ga0134112_101502642	3300017656	Grasslands Soil	MGRKKRIGFADLQATQAEFAGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT
Ga0184605_100016013	3300018027	Groundwater Sediment	VGRKKRIGFADLQATQAEFEGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFVAAT
Ga0184608_100091932	3300018028	Groundwater Sediment	VGRKKRVGFADLQATHAELRRGELRCPECKRSLSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFVAAA
Ga0184634_103328931	3300018031	Groundwater Sediment	VGRKKRVGFADLQATHAEFARGELRCPECKRSVSEADGLKFVLALGQTESSLATLKCPRCRTTISIRFVAAA
Ga0184621_102339431	3300018054	Groundwater Sediment	VGRKMRVGFADLQATHAELRRGELRCPECKRSLSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFVAAA
Ga0184619_100206054	3300018061	Groundwater Sediment	FADLQATQAEFEGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFVAAT
Ga0184619_100841091	3300018061	Groundwater Sediment	ADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0184617_11294112	3300018066	Groundwater Sediment	VGRKKRVGFADLQATHAELDNGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFVAAH
Ga0184618_100365961	3300018071	Groundwater Sediment	RVGFADLQATHAELERGELRCPECKRSVSDADGLRFVPALGQAESSLATLNCPRCRTTISIRFIAAV
Ga0184612_106167752	3300018078	Groundwater Sediment	VGRKKRVGFADLQATHAELSRGELRCPECKRSVSDADGLRFVPTLGQAESSLATLNCPRCRTTISIRFIAAA
Ga0066655_100945902	3300018431	Grasslands Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH
Ga0066655_111175462	3300018431	Grasslands Soil	VGRKKRIGFADLQATQAELAGGELRCPECKRKLSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT
Ga0066667_105088842	3300018433	Grasslands Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFVAAH
Ga0066662_102835941	3300018468	Grasslands Soil	MGRKKRVGFADLQATQAQIDRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT
Ga0066669_118560021	3300018482	Grasslands Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISI
Ga0184642_11982922	3300019279	Groundwater Sediment	DLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0193720_10434552	3300019868	Soil	VGRKKRVGFADLQATHAEFGRGELRCPECKRSMSEADGLKFVPTLGQTESSLATLKCPRCRTTISIRFVEAA
Ga0193715_10437671	3300019878	Soil	LQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAA
Ga0193747_11086491	3300019885	Soil	KKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0193719_100071351	3300021344	Soil	LGRKKRVGFADLQATHAELERGELRCPECKRSVSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFIAAV
Ga0193719_100141854	3300021344	Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0222622_105034262	3300022756	Groundwater Sediment	VGRKKRVGFADLQATHAEFGRGELRCPECKRNMSEADGLKFVPTLGQTESSLATLKCPRCRTTISIRFVEAA
Ga0207684_116888241	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMIS
Ga0207646_1000160122	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRVGFADLQATHGELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0207646_100049939	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAR
Ga0207639_114996862	3300026041	Corn Rhizosphere	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTM
Ga0209234_10459392	3300026295	Grasslands Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFVATH
Ga0209235_11505892	3300026296	Grasslands Soil	VGRKKRVGFADLQATQAQIDRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT
Ga0209235_11524011	3300026296	Grasslands Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQVESSLATLSCPRCRTMISIRFVAAH
Ga0209237_10350652	3300026297	Grasslands Soil	MEGAPLVGRKKRVGFADLQATQAQIDRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT
Ga0209238_11413601	3300026301	Grasslands Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIA
Ga0209055_10185705	3300026309	Soil	VGIEITQPAEGAELVGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0209471_11329002	3300026318	Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAA
Ga0209471_11832921	3300026318	Soil	MGRKKRIGFADLQATRAEFERRELRCPECKRKLSEEDAPKLVTTLGQSQPTLATLSCPRCRTMISI
Ga0209266_10212211	3300026327	Soil	KRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH
Ga0209690_10476281	3300026524	Soil	QATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATMSCPRCRTMISIRFIAAH
Ga0209690_11909411	3300026524	Soil	ATQAELARGELRCPECKRKLSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFIAAT
Ga0209160_12412521	3300026532	Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRT
Ga0209157_10066732	3300026537	Soil	MGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGHTESSLATLSCPRCRTMISIRFVAAH
Ga0209805_12606342	3300026542	Soil	MGRKKRIGFADLQATRAEFERRELRCPECKRKLSEEDAPKLVTTLGQSQPTLATLSCPRCRTMISIRFLEA
Ga0209969_10441191	3300027360	Arabidopsis Thaliana Rhizosphere	HAELGRGELRCPECKRNVSEADGLRYVPTLGQAESSLATLNCPRCRTTISIRFVEAV
Ga0209011_11464413	3300027678	Forest Soil	EQLDARDRHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLKCPRCRTTISIRFTTAA
Ga0209966_11373992	3300027695	Arabidopsis Thaliana Rhizosphere	MGRKKKRVGFADLQATRAELERGELRCPECKRTVSDADGLRFVPTLGQSESSLATLNCPRCRTTISIRFVEAV
Ga0208989_102305982	3300027738	Forest Soil	VGRKKRIGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMIRIGPL
Ga0209590_110093281	3300027882	Vadose Zone Soil	MCRAASRGLLFCGPMEGAPLMGRKKRVGFADLQATQAQIDRGELRCPECKRKVSEADGLRFVPAFGKAEPSLAQLSCPRCRTMIGIRVIAAT
Ga0209486_105630922	3300027886	Agricultural Soil	VGRKKRVGFADLKATHAELQRGELRCPECKRSVSEADGLRFVPVFGQTESSLATLNCPRCRTTISIRLVAAA
Ga0209486_110925552	3300027886	Agricultural Soil	VGKKKRVGFADLKATHAELRRGDLRCPECKRSVSEADGLRFVPAFGQTESSLATLSCPRCRTTISIRLITAA
Ga0307303_101301151	3300028713	Soil	VGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIR
Ga0307317_102877512	3300028720	Soil	GFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0307282_100699322	3300028784	Soil	KRSQDEWGCSVGRKKRVGFADLQATHAELERGELRCPECKRSVSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFIAAV
Ga0307282_103436482	3300028784	Soil	QATHAELDRGELRCPECKRSVAEADGLRFVPALGQVESSLATLSCPRCRTMISIRFVAAH
Ga0307290_101182873	3300028791	Soil	VGRKKRVGFADLQATHAELERGELRCPECKRSVSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFVAAA
Ga0307504_100495591	3300028792	Soil	VGRKKRVGFADLQATHGELDRGELRCPECKRSVAEADGLRFVPALGQAESSLATLSCPRCRTMISIRFI
Ga0307299_100202992	3300028793	Soil	VGRKKRVGFADLQATHAELRRGELRCPECKRSVSGADGLRFVPALGQTESSLATLNCPRCRTTISIRFVAAA
Ga0307305_103835192	3300028807	Soil	KKRVGFADLQATHAELGRGELRCPECRRSVSDADGLKFVPAFGQNESSLATLNCPRCRTTISIRFIEAS
Ga0307296_100256032	3300028819	Soil	VGRKKRVGFADLQATRAQLGRGELRCPECKRSFSDADGVRLVPTLGQAESSLATIKCPRCRTTISIRFIAAM
Ga0307312_108403922	3300028828	Soil	VGRKKRVGFADLQATHAELERGELRCPECKRSVSDADGLRFVPALGQTESSLATLNCPRCRTTISIRFIAAV
Ga0307278_102582072	3300028878	Soil	AEFEGGELRCPECKRKVSEADGLRFVAAFGEAAPSLAQLSCPRCRTMISIRFVAAT
Ga0307277_101429001	3300028881	Soil	SVGRKKRVGFADLQATHAELERGELRCPECKRSVSGADGLRFVPALGQTESSLATLNCPRCRTTISIRFVAAA
Ga0307277_102494942	3300028881	Soil	VARKKRVGFADLQATHAEFRRGELRCPECRRSVSDADGLKFVPAFGQSESSLATLNCPRCRTTISIRFIAAS
Ga0308189_105093532	3300031058	Soil	VGRKKRVGFADLQATHAEFGRGELRCPECKRSVSEADGLKFVPTLGQTESSLATLKCPRCRTTISIRFVEAA
Ga0308184_10233332	3300031095	Soil	VGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH
Ga0307473_101639381	3300031820	Hardwood Forest Soil	VGRKKRIGFADLQATHGELDRGELRCPECKRSVAEADGLRFVPALGQAESSLATLSCPRCRTMISIRFVA
Ga0370546_023606_138_356	3300034681	Soil	MGRKKRVGFADLQATHAELDRGELRCPECKRSVAEADGLRFVPALGQTESSLATLSCPRCRTMISIRFIAAH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040289

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences