Metagenome Family F040242

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040242
Family Type	Metagenome
Number of Sequences	162
Average Sequence Length	48 residues
Representative Sequence	VQDGTRIYYSPKLGRKSDVLELDYVRVLFRSKPIMSGPEDLVAEVIMGRF
Number of Associated Samples	117
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.38 %
% of genes near scaffold ends (potentially truncated)	42.59 %
% of genes from short scaffolds (< 2000 bps)	72.84 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.481 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.247 % of family members)
Environment Ontology (ENVO)	Unclassified (30.247 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.383 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.49% β-sheet: 0.00% Coil/Unstructured: 70.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF09371	Tex_N	24.69
PF16921	Tex_YqgF	5.56
PF00069	Pkinase	4.32
PF03551	PadR	4.32
PF04545	Sigma70_r4	3.09
PF00903	Glyoxalase	2.47
PF04542	Sigma70_r2	2.47
PF00140	Sigma70_r1_2	1.85
PF14639	YqgF	1.85
PF07282	OrfB_Zn_ribbon	1.85
PF02566	OsmC	1.23
PF01022	HTH_5	1.23
PF14279	HNH_5	0.62
PF02683	DsbD	0.62
PF12270	Cyt_c_ox_IV	0.62
PF12836	HHH_3	0.62
PF13358	DDE_3	0.62
PF13599	Pentapeptide_4	0.62
PF13374	TPR_10	0.62
PF01568	Molydop_binding	0.62
PF14239	RRXRR	0.62
PF00575	S1	0.62
PF10604	Polyketide_cyc2	0.62
PF00814	TsaD	0.62
PF13328	HD_4	0.62
PF12728	HTH_17	0.62
PF02954	HTH_8	0.62
PF00266	Aminotran_5	0.62
PF01832	Glucosaminidase	0.62
PF13302	Acetyltransf_3	0.62
PF07992	Pyr_redox_2	0.62
PF00805	Pentapeptide	0.62
PF13186	SPASM	0.62
PF00583	Acetyltransf_1	0.62
PF02909	TetR_C_1	0.62
PF00196	GerE	0.62
PF00472	RF-1	0.62
PF04248	NTP_transf_9	0.62
PF04255	DUF433	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	17.28
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	4.32
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	4.32
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	4.32
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	4.32
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.47
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.47
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.47
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.23
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.23
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.62
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.62
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	0.62
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.62
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	0.62
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.62
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.62
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.48 %
Unclassified	root	N/A	18.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.48 %
Unclassified	root	N/A	18.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.48 %
Unclassified	root	N/A	18.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.41 %
Unclassified	root	N/A	18.52 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.62 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.62 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	46.30 %
Unclassified	root	N/A	18.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.23 %
unclassified Synergistota	no rank	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	23.46 %
Unclassified	root	N/A	18.52 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	6.17 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.23 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.52 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	9.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.17 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.23 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.52 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	8.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.17 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.23 %
Thermosporotrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Thermosporotrichaceae	0.62 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.17 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	5.56 %
unclassified Ktedonobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae	1.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.23 %
Thermosporothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Thermosporotrichaceae → Thermosporothrix	0.62 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.17 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4.94 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.23 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	0.62 %
Thermosporothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Thermosporotrichaceae → Thermosporothrix	0.62 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.17 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4.94 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.23 %
Ktedonobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	0.62 %
Thermosporothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Thermosporotrichaceae → Thermosporothrix	0.62 %
Synergistetes bacterium ADurb.BinA166	species	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	0.62 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10064348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1059	Open in IMG/M
3300002906\|JGI25614J43888_10227785	Not Available	504	Open in IMG/M
3300002914\|JGI25617J43924_10185721	All Organisms → cellular organisms → Bacteria → Terrabacteria group	692	Open in IMG/M
3300002914\|JGI25617J43924_10233041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	618	Open in IMG/M
3300002917\|JGI25616J43925_10018421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3096	Open in IMG/M
3300002917\|JGI25616J43925_10022019	Not Available	2827	Open in IMG/M
3300004080\|Ga0062385_10962486	Not Available	570	Open in IMG/M
3300005167\|Ga0066672_10051167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	2368	Open in IMG/M
3300005172\|Ga0066683_10723102	All Organisms → cellular organisms → Bacteria → Terrabacteria group	587	Open in IMG/M
3300005174\|Ga0066680_10794075	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005177\|Ga0066690_10174207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1423	Open in IMG/M
3300005187\|Ga0066675_10193666	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300005332\|Ga0066388_102994705	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005332\|Ga0066388_104266831	Not Available	729	Open in IMG/M
3300005332\|Ga0066388_105974199	Not Available	615	Open in IMG/M
3300005406\|Ga0070703_10027584	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300005435\|Ga0070714_100232767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1698	Open in IMG/M
3300005436\|Ga0070713_100189670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1852	Open in IMG/M
3300005450\|Ga0066682_10458903	All Organisms → cellular organisms → Bacteria → Terrabacteria group	809	Open in IMG/M
3300005454\|Ga0066687_10427782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	771	Open in IMG/M
3300005467\|Ga0070706_100038599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4407	Open in IMG/M
3300005468\|Ga0070707_100196310	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300005471\|Ga0070698_100047432	All Organisms → cellular organisms → Bacteria	4391	Open in IMG/M
3300005471\|Ga0070698_100098603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	2895	Open in IMG/M
3300005531\|Ga0070738_10021543	All Organisms → cellular organisms → Bacteria	4871	Open in IMG/M
3300005531\|Ga0070738_10163375	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005532\|Ga0070739_10025872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4531	Open in IMG/M
3300005533\|Ga0070734_10100609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1698	Open in IMG/M
3300005534\|Ga0070735_10040025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	3179	Open in IMG/M
3300005552\|Ga0066701_10316744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	967	Open in IMG/M
3300005553\|Ga0066695_10040948	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300005559\|Ga0066700_10083250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2059	Open in IMG/M
3300005559\|Ga0066700_10131430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1677	Open in IMG/M
3300005587\|Ga0066654_10583667	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005764\|Ga0066903_101659502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1215	Open in IMG/M
3300006052\|Ga0075029_100019976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3744	Open in IMG/M
3300006052\|Ga0075029_100049769	All Organisms → cellular organisms → Bacteria	2424	Open in IMG/M
3300006059\|Ga0075017_100559608	Not Available	871	Open in IMG/M
3300006086\|Ga0075019_10902311	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006102\|Ga0075015_100511618	Not Available	693	Open in IMG/M
3300006174\|Ga0075014_100880646	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300006354\|Ga0075021_10243291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1106	Open in IMG/M
3300006755\|Ga0079222_10771771	Not Available	778	Open in IMG/M
3300006791\|Ga0066653_10607453	All Organisms → cellular organisms → Bacteria → Terrabacteria group	556	Open in IMG/M
3300006796\|Ga0066665_11248058	Not Available	568	Open in IMG/M
3300006796\|Ga0066665_11536484	Not Available	521	Open in IMG/M
3300006904\|Ga0075424_102672077	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300007982\|Ga0102924_1014342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6284	Open in IMG/M
3300007982\|Ga0102924_1222401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	801	Open in IMG/M
3300009012\|Ga0066710_102899942	All Organisms → cellular organisms → Bacteria → Terrabacteria group	673	Open in IMG/M
3300009029\|Ga0066793_10202121	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1157	Open in IMG/M
3300009038\|Ga0099829_10006330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	7304	Open in IMG/M
3300009038\|Ga0099829_10667033	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300009088\|Ga0099830_10028964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	3717	Open in IMG/M
3300009088\|Ga0099830_10183826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1627	Open in IMG/M
3300009088\|Ga0099830_10239523	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300009088\|Ga0099830_10289737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1304	Open in IMG/M
3300009089\|Ga0099828_10023459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4862	Open in IMG/M
3300009089\|Ga0099828_10461937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1145	Open in IMG/M
3300009089\|Ga0099828_11624967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	569	Open in IMG/M
3300009089\|Ga0099828_11739122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	548	Open in IMG/M
3300009137\|Ga0066709_100551999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1632	Open in IMG/M
3300010048\|Ga0126373_10672342	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300010159\|Ga0099796_10366913	Not Available	624	Open in IMG/M
3300010329\|Ga0134111_10169296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	872	Open in IMG/M
3300010358\|Ga0126370_10893147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	802	Open in IMG/M
3300010358\|Ga0126370_12345865	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300010361\|Ga0126378_10080317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3157	Open in IMG/M
3300010366\|Ga0126379_10923524	Not Available	976	Open in IMG/M
3300010366\|Ga0126379_11070951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	912	Open in IMG/M
3300010366\|Ga0126379_11478755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	785	Open in IMG/M
3300010376\|Ga0126381_103094101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300010379\|Ga0136449_100200271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3800	Open in IMG/M
3300010387\|Ga0136821_1103428	Not Available	779	Open in IMG/M
3300010398\|Ga0126383_11154710	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300011269\|Ga0137392_10016217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	5115	Open in IMG/M
3300011269\|Ga0137392_10212939	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300011271\|Ga0137393_10283653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1409	Open in IMG/M
3300012096\|Ga0137389_10023038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4412	Open in IMG/M
3300012096\|Ga0137389_10090542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2410	Open in IMG/M
3300012096\|Ga0137389_10525732	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012189\|Ga0137388_11227535	Not Available	688	Open in IMG/M
3300012198\|Ga0137364_10052167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2729	Open in IMG/M
3300012198\|Ga0137364_10093320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	2105	Open in IMG/M
3300012199\|Ga0137383_10354601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1075	Open in IMG/M
3300012199\|Ga0137383_10465708	All Organisms → cellular organisms → Bacteria → Terrabacteria group	926	Open in IMG/M
3300012199\|Ga0137383_11372501	Not Available	501	Open in IMG/M
3300012201\|Ga0137365_10243024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Thermosporotrichaceae → Thermosporothrix	1340	Open in IMG/M
3300012202\|Ga0137363_10434310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1097	Open in IMG/M
3300012208\|Ga0137376_11152487	Not Available	663	Open in IMG/M
3300012209\|Ga0137379_10722993	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300012210\|Ga0137378_10711779	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300012211\|Ga0137377_10469035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1197	Open in IMG/M
3300012351\|Ga0137386_10256637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1257	Open in IMG/M
3300012356\|Ga0137371_10088937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2400	Open in IMG/M
3300012357\|Ga0137384_10099511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	2426	Open in IMG/M
3300012357\|Ga0137384_10992383	Not Available	675	Open in IMG/M
3300012357\|Ga0137384_11069944	Not Available	647	Open in IMG/M
3300012357\|Ga0137384_11428511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	540	Open in IMG/M
3300012359\|Ga0137385_10165362	Not Available	1942	Open in IMG/M
3300012359\|Ga0137385_10525659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1000	Open in IMG/M
3300012359\|Ga0137385_11282636	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012362\|Ga0137361_10010063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	6712	Open in IMG/M
3300012362\|Ga0137361_10205798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1781	Open in IMG/M
3300012363\|Ga0137390_10057593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	3783	Open in IMG/M
3300012582\|Ga0137358_11087713	Not Available	511	Open in IMG/M
3300012925\|Ga0137419_10611874	Not Available	876	Open in IMG/M
3300013772\|Ga0120158_10040237	All Organisms → cellular organisms → Bacteria	3397	Open in IMG/M
3300013772\|Ga0120158_10217753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	981	Open in IMG/M
3300015359\|Ga0134085_10389228	All Organisms → cellular organisms → Bacteria → Terrabacteria group	624	Open in IMG/M
3300016319\|Ga0182033_10472740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1073	Open in IMG/M
3300017821\|Ga0187812_1011056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	3130	Open in IMG/M
3300017928\|Ga0187806_1169020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	729	Open in IMG/M
3300017943\|Ga0187819_10002397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9927	Open in IMG/M
3300017959\|Ga0187779_10123596	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300017966\|Ga0187776_10158259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1398	Open in IMG/M
3300017973\|Ga0187780_10064343	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	2525	Open in IMG/M
3300017974\|Ga0187777_10245239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1215	Open in IMG/M
3300017975\|Ga0187782_11456333	Not Available	539	Open in IMG/M
3300017999\|Ga0187767_10017597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1504	Open in IMG/M
3300018431\|Ga0066655_11322137	All Organisms → cellular organisms → Bacteria → Terrabacteria group	518	Open in IMG/M
3300018468\|Ga0066662_12064981	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300018482\|Ga0066669_11153952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	699	Open in IMG/M
3300021046\|Ga0215015_10128799	Not Available	1207	Open in IMG/M
3300021362\|Ga0213882_10197747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	829	Open in IMG/M
3300021476\|Ga0187846_10039486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	2111	Open in IMG/M
3300021560\|Ga0126371_10648024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1205	Open in IMG/M
3300022557\|Ga0212123_10032718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5278	Open in IMG/M
3300022557\|Ga0212123_10074358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2909	Open in IMG/M
3300022557\|Ga0212123_10837324	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	549	Open in IMG/M
3300025885\|Ga0207653_10031235	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300025910\|Ga0207684_10256032	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300026296\|Ga0209235_1159483	All Organisms → cellular organisms → Bacteria → Terrabacteria group	879	Open in IMG/M
3300026297\|Ga0209237_1149219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	911	Open in IMG/M
3300026319\|Ga0209647_1169123	All Organisms → cellular organisms → Bacteria → Terrabacteria group	869	Open in IMG/M
3300026319\|Ga0209647_1303155	Not Available	537	Open in IMG/M
3300026351\|Ga0257170_1049546	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300026354\|Ga0257180_1004521	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300026515\|Ga0257158_1063249	Not Available	698	Open in IMG/M
3300026538\|Ga0209056_10583303	All Organisms → cellular organisms → Bacteria → Terrabacteria group	565	Open in IMG/M
3300026551\|Ga0209648_10000321	All Organisms → cellular organisms → Bacteria	35776	Open in IMG/M
3300026551\|Ga0209648_10002903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	14288	Open in IMG/M
3300026551\|Ga0209648_10370121	All Organisms → cellular organisms → Bacteria → Terrabacteria group	969	Open in IMG/M
3300026551\|Ga0209648_10541265	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300026552\|Ga0209577_10069106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2930	Open in IMG/M
3300027773\|Ga0209810_1001098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	45155	Open in IMG/M
3300027846\|Ga0209180_10014614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4101	Open in IMG/M
3300027846\|Ga0209180_10015825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3949	Open in IMG/M
3300027846\|Ga0209180_10055061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	2203	Open in IMG/M
3300027857\|Ga0209166_10076442	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300027862\|Ga0209701_10242820	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300027875\|Ga0209283_10551742	All Organisms → cellular organisms → Bacteria → Terrabacteria group	736	Open in IMG/M
3300027882\|Ga0209590_10612834	Not Available	700	Open in IMG/M
3300027910\|Ga0209583_10410105	All Organisms → cellular organisms → Bacteria → Terrabacteria group	647	Open in IMG/M
3300027911\|Ga0209698_10566769	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300027911\|Ga0209698_11344917	Not Available	522	Open in IMG/M
3300032160\|Ga0311301_10449479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1942	Open in IMG/M
3300032160\|Ga0311301_12088684	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300033803\|Ga0314862_0117009	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300034090\|Ga0326723_0437485	Not Available	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.38%
Host-Associated	Host-Associated	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.04%
Aquatic	Environmental → Aquatic	12.35%
Plants	Host-Associated → Plants	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.19%
Sediment	Environmental → Aquatic → Sediment	6.17%
Freshwater	Environmental → Aquatic → Freshwater	3.09%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.09%
Peat	Environmental → Terrestrial → Peat	0.62%
Cave	Environmental → Terrestrial → Cave	0.62%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.22%
Loam	Environmental → Terrestrial → Soil → Loam	8.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.47%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.32%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.62%
Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.70%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.23%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.62%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.62%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.62%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.62%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010387	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 k-mer 51	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_100643482	3300002906	Grasslands Soil	VQDGMRIYYSPRLSRKSDTLELDYVRVLFRSKPIVSGPENLIANIIMGRF*
JGI25614J43888_102277852	3300002906	Grasslands Soil	SPKLGRTSDVLELDYARLLFHSKPVLSGPDNLVATILMGRI*
JGI25617J43924_101857212	3300002914	Grasslands Soil	MRIYYSPRLGRKSDTLELDYVRLLFRSKPIVSGPENLIAQVIMGRL*
JGI25617J43924_102330411	3300002914	Grasslands Soil	VRIYYSPKLGRKSDVLELDYARLLFHSKPIMSGPDDLVATILMGRI*
JGI25616J43925_100184214	3300002917	Grasslands Soil	VQDGMRIYYSPRLGRKSDTLELDYVRLLFRSKPIVSGPENLIAQVIMGRL*
JGI25616J43925_100220191	3300002917	Grasslands Soil	VQDGLRIYYSPRLSRKSDTLELDYVRMLFRSKPIVSGPENLIAHIIMGRF*
Ga0062385_109624861	3300004080	Bog Forest Soil	MQDGIHIYYSPKLGGQSDPLELDYVRILFRSKPLMTGPEDLLANVIMGRI*
Ga0066672_100511673	3300005167	Soil	MQDGLRIYYSPKLGRDTLELDYVRILFSSKPILSGPEELVAKVVMGR
Ga0066683_107231021	3300005172	Soil	LTQDGVKVYYSLQLGRKAEVLELDYVRTLFRSRPQLSGPEELLAQIIMGRF*
Ga0066680_107940751	3300005174	Soil	QDGTRIYYTPKLGRKSDVLEFDYVRILFRCKPIMSGPEDLVAEVIMGRF*
Ga0066690_101742071	3300005177	Soil	MQDGLRIYYSPKLGRDTLELDYVRILFSSKPILSGPEELVAKVVMGRF*
Ga0066675_101936661	3300005187	Soil	KLGRKSDVLEFDYVRILFRSKPIMSGPEDLVAEVIMGRL*
Ga0066388_1029947051	3300005332	Tropical Forest Soil	MRIYYSPRLGNKSDMLEFDYVRILFRSKPIMSGPEHLVAEVIMGHF*
Ga0066388_1042668311	3300005332	Tropical Forest Soil	VRIYYSPKLGRKSDVLELDYVRLLFHRKPIMSGPDDLVVTIMMGRI*
Ga0066388_1059741991	3300005332	Tropical Forest Soil	IYYSPKLGRKSDILELDYVRLLFRSKPMLSGPEELVATVIMGRL*
Ga0070703_100275841	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	YSPRLGRKSDILELDYMRVLFRSKPILSGPENLIANIIMGHF*
Ga0070714_1002327671	3300005435	Agricultural Soil	VQDGTRIYYSPKLGRKSDVLELDYVRVLFHSKPIMSGPENLVAE
Ga0070713_1001896702	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VQDGTRIYYSPKLGRKSDVLELDYVRVLFHSKPIMSGPENLVAEVIMGRF*
Ga0066682_104589032	3300005450	Soil	LTQDGVKVYYSLQLGRKADVLELDYVRTLFRSRPQLSGPEELLAQIIMGRF*
Ga0066687_104277822	3300005454	Soil	YSPRLGRKSDVLELDYVRILFRCKPIMSGPEELVAEVIMGRF*
Ga0070706_1000385993	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VQVYYSPKLDRKADVLELDYARILFRSKPILSGPDDLVATIIMGRV*
Ga0070707_1001963102	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LRVYYSPRLGRKSDILELDYMRVLFRSKPILSGPENLIANIIMGHF*
Ga0070698_1000474321	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRIYYSPRLSRKSDTLELDYVRVLFRSKPIVSGPENLIANIIMGRF*
Ga0070698_1000986032	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQDGIHIYYSPRLARKSDSMELDYVRVLFRGRPLMTGPEDLVASVIMGRI*
Ga0070738_100215431	3300005531	Surface Soil	YAFFEQDGVRVYYTPKLERKTDVLELDYVRFLFHGRPLMTGPEALLATIIMARI*
Ga0070738_101633752	3300005531	Surface Soil	VRIYYTPKLERKTDVLELDYVRFLFHGRPLMTGPEALLATIIMARI*
Ga0070739_100258722	3300005532	Surface Soil	VRIYYTPKLERKTDVLELDYVRFLFHGRPLMTGPETLLATIIMARI*
Ga0070734_101006093	3300005533	Surface Soil	MFVQDDVHIYYSPRLGRKSDVLELDYVRILFCSKLVVSGPEQLLAHVIMGRL*
Ga0070735_100400252	3300005534	Surface Soil	LLQDGLHIYYSPRFARQSDTIELGYVRVLFRHKLVVSGPEVLLANVVMGRV*
Ga0066701_103167442	3300005552	Soil	LCVYYSPRLGRKSDILELDYMRVLFRSRPILSGPENLIAN
Ga0066695_100409482	3300005553	Soil	LTQDGVKVYYSLQLGRKAEVLELDYVRTLFRSKPQLSGPEELLAQIIMGRF*
Ga0066700_100832502	3300005559	Soil	VQDGMRIYYSPRLSRKSDTLELDYVRVLFRSKPIVSGPENLIATIIMGRF*
Ga0066700_101314302	3300005559	Soil	MQDGVRVYYSPKLGRKSDILELDYVRILFQSKPIMSGPEELVANVVMGRF*
Ga0066654_105836672	3300005587	Soil	TPKLGRKSDVLEFDYVRILFRSKPIMSGPENLVAEVIMGHF*
Ga0066903_1016595022	3300005764	Tropical Forest Soil	VQDGTRIYYSPKLGRKSNVLELDYVRVLFRSKPIMSGPEDLVAEVIMGRF*
Ga0075029_1000199762	3300006052	Watersheds	MQDGIHIYYSPRLARKSDSMELDYVRVLFRGKPLMTGPEDLVASIIMGRI*
Ga0075029_1000497691	3300006052	Watersheds	VQDGVRIYYSPKLGRKSDVLELDYVRLLFHSKPIMSGPDDLVATIMMGRI*
Ga0075017_1005596082	3300006059	Watersheds	LRIYYTPKLGRKSDVLELDYVRILFRSKPIMSGPEDLVAAVIMGRF*
Ga0075019_109023112	3300006086	Watersheds	RYESFDQDGTRVYYTPKLGRTSDVLEFDYVRILFRSKPIMSGPEDLVAQVIMGRF*
Ga0075015_1005116182	3300006102	Watersheds	MHIYYTPKLGRKSDVLELDYVRILFRSKPIMSGPEDLVAAVIMGRF*
Ga0075014_1008806462	3300006174	Watersheds	ESFDQDGTRIYYSPRLGRKSKVLEFDYVRILFRSKPIMSGPEDLVAGVIMGRF*
Ga0075021_102432912	3300006354	Watersheds	VQIYFSPKLGRKADVMELDYVRTLFRSRPQLSGPEELLAQVIMGRF*
Ga0079222_107717711	3300006755	Agricultural Soil	MRIYYSPRLGNKSDVFEFDYVRILFRSKPIMSGPEHLVAEVIMGRF*
Ga0066653_106074531	3300006791	Soil	DPNRYASLTQDGVKVYYSLKLGRKADVLELDYVRTLFRSKPQLSGPEELLARIIMGRF*
Ga0066665_112480582	3300006796	Soil	VRKSDVLELDYARLLFYSKPIMSGPDDLVATLIMGRI*
Ga0066665_115364842	3300006796	Soil	LVQDGVRIYYSPKLCRKSDVLELDYPRLLFHSKPIMSGPDDLVATIIMG
Ga0075424_1026720772	3300006904	Populus Rhizosphere	QDGTRIYYSPKLGRKSDVLELDYVRVLFHSKPIMSGPENLVAEVIMGRF*
Ga0102924_10143423	3300007982	Iron-Sulfur Acid Spring	VQDGISIYYTPTLERKSATLELDYMRLLFHSRAIMSGPEELIAQVIMGRL*
Ga0102924_12224012	3300007982	Iron-Sulfur Acid Spring	ELFVQDGMRIYYSPKLGRKSDLLELDYVRILFHSKPVLSGPDNLVATILMGRL*
Ga0066710_1028999421	3300009012	Grasslands Soil	LTQDGVKVYYSLQLGRKADVLELDYVRTLFRSKPQLSGPEELLAQIIMGRF
Ga0066793_102021212	3300009029	Prmafrost Soil	VQIYFSPKLGRKADVMELDYVRSLFRSRPQLSGPEELLAQVIMGRF*
Ga0099829_100063302	3300009038	Vadose Zone Soil	MRIYYSPRLGSKSDTLELDYVRILFRSKPIVSGPENLIAQVIMGRL*
Ga0099829_106670332	3300009038	Vadose Zone Soil	MQDGIHIYYSARLARKSDSMELDYVRVLFRSKPLMTGPEDLVASIIMGRL*
Ga0099830_100289645	3300009088	Vadose Zone Soil	MQDGVQIYYSPRLARKSNLLELDYVRVLFKNKPIMSGPEELVANVVMGRF*
Ga0099830_101838261	3300009088	Vadose Zone Soil	MQDGLRIYYSPKLGRDTLELDYVRILFRSKPILSGPEELVAKVVIGRF*
Ga0099830_102395233	3300009088	Vadose Zone Soil	MQDGIHIYYSPRLARKSDSMELDYVRVLFRSKPLMTGPEDLVASVIMGRI*
Ga0099830_102897371	3300009088	Vadose Zone Soil	PKLGRKSDVLELDYARLLFHSKPIMSGPDDLVATIMMGRI*
Ga0099828_100234595	3300009089	Vadose Zone Soil	MQDGIHIYYSARLARKSDSMELDYVRVLFRSKPLMTGPEDLVASVIMGRI*
Ga0099828_104619372	3300009089	Vadose Zone Soil	VQDGVRIYYSPKLGRKSDVLELDYVRLLFYSKPIMSGPDDLVATIMMGRI*
Ga0099828_116249672	3300009089	Vadose Zone Soil	YYSPQLGRRSELLELDYVRTLFRSKPMMTGPEDLVASVLTGHL*
Ga0099828_117391221	3300009089	Vadose Zone Soil	RIYYTPKLGSKSDVLELDFVRLLFRSRPIMSGPEDLLAKVIMGRI*
Ga0066709_1005519991	3300009137	Grasslands Soil	LTQDGVKVYYSLQLGRKADVLELDYVRTLFRSKPQLSGPEELLAQIIMGRF*
Ga0126373_106723422	3300010048	Tropical Forest Soil	GVRIYYSPKLGRKSDVLELDCVRFLWNRKPVMSGPEDLVATIMMGRI*
Ga0099796_103669131	3300010159	Vadose Zone Soil	MQDGLRIYYSPKLGRDTLELDYVRILFSSKPILSGPEELVAKV
Ga0134111_101692961	3300010329	Grasslands Soil	VKVYYSLKLGRKADVLELDYVRTLFRSKPQLSGPEELLAQIIMGRF*
Ga0126370_108931471	3300010358	Tropical Forest Soil	VQDGTRIYYTPRLSRKSDTIELDYVRVLFRSKPILSGPENLIATLIM
Ga0126370_123458651	3300010358	Tropical Forest Soil	HVYYSPGLARKSNTMELDYARVLFRSKPLVTGPEDLVASVIMGRI*
Ga0126378_100803173	3300010361	Tropical Forest Soil	MQDGIHVYYSPGLARKSNTMELDYARVLFRSKPLVTGPEDLVASVIMGRI*
Ga0126379_109235242	3300010366	Tropical Forest Soil	MQDGIHVYYSPGLARKSNTMELDYVRVLFRSKPLMTGPEDLVASVIMGRI*
Ga0126379_110709511	3300010366	Tropical Forest Soil	DGVRIYYSPKLGRKADVLELDYIRILFRSKPMLSGPDDLVATILMGRI*
Ga0126379_114787551	3300010366	Tropical Forest Soil	QDGTRIYYSPKLSRKSDVLEFDYVRILFRSKPIMSGPEHLVSEVIMGRF*
Ga0126381_1030941011	3300010376	Tropical Forest Soil	RLGRRSDILELDYARMLFHSKPILKGPEELVAAVVIGQI*
Ga0136449_1002002714	3300010379	Peatlands Soil	LRIYYTPKLARQSDVLELDFARVLFRNRPVLVGPEELLAQVVMGRV*
Ga0136821_11034282	3300010387	Sediment	YSPKLGRKSDVLELDYARILFFSKPIMSGPDDLVATLIMGQI*
Ga0126383_111547102	3300010398	Tropical Forest Soil	MQDGIHVYYSPRLACKSDSMELDYVRLLFRNKPLMTGPEDLVASVIMGRI*
Ga0137392_100162174	3300011269	Vadose Zone Soil	MQDGIHIYYSPRLARKSDSLELDYVRVLFRSKPLMTGPEDLVASVIMGRI*
Ga0137392_102129391	3300011269	Vadose Zone Soil	RYESFVQDGMRIYYSPRLSRKSDTLELDYVRVLFRSKPIVSGPENLIATIIMGRF*
Ga0137393_102836531	3300011271	Vadose Zone Soil	KSDLLELDYARILFRSKPVLSGPDNLVATILMGRI*
Ga0137389_100230382	3300012096	Vadose Zone Soil	MQDGIHIYYSPRLARKSDSMELDYVRVLFRSKPLMTGPEDLVASIIMGRL*
Ga0137389_100905421	3300012096	Vadose Zone Soil	LGRKSDLLELDYARILFRSKPVLSGPDNLVATILMGRI*
Ga0137389_105257322	3300012096	Vadose Zone Soil	KLGRKSEVLELDYVRILFRSKPIMSGPEDLVAAVIMGRF*
Ga0137388_112275351	3300012189	Vadose Zone Soil	SPKLGRKSDVLELDYVRVLFHSKPIMSGPDDLLATVIMGRI*
Ga0137364_100521672	3300012198	Vadose Zone Soil	MQDGIHIYYSPRLARKSDTMELDYVRVLFRGKLLLTGPENLVASVIMGRI*
Ga0137364_100933203	3300012198	Vadose Zone Soil	MRIYFTPKLGRKSDVLELDYVRILFRSKPIMSGPEDLVAAVIMGRF*
Ga0137383_103546012	3300012199	Vadose Zone Soil	EPRDSDRYVSFMQDGIHIYYSPRLARKSDSMELDYVRVLFRSRPLMTGPEDLVASIIMGRI*
Ga0137383_104657081	3300012199	Vadose Zone Soil	MQDGVRIYYSPKLGRKSDTLELDYVRILFQSKPIVSGPEELVANVVMGRF*
Ga0137383_113725011	3300012199	Vadose Zone Soil	EPRDSDRYVSFMQDGIHIYYSPRLARKSDSMELDYVRVLFRGRPLMTGPEDLVASVIMGRI*
Ga0137365_102430241	3300012201	Vadose Zone Soil	MRIYYSPKLGRKADILELDYARILFRCKPMLSGPDDLVATIMMGRI*
Ga0137363_104343102	3300012202	Vadose Zone Soil	MQDGVRIYYSPQLGRKSDTLELDYVRVLFRNKPLMTGPEDLLATLIMGRI*
Ga0137376_111524872	3300012208	Vadose Zone Soil	MQDGIHIYYSPRLARKSDTMELDYVRVLFRGKLLLTGPENLVASIIMGRI*
Ga0137379_107229932	3300012209	Vadose Zone Soil	MRIYYSPKLGRKAEILELDYVRVLFRSKPIMSGPENLVAEVIMGRF*
Ga0137378_107117792	3300012210	Vadose Zone Soil	ARKSDTMELDYVRVLFRGKPLMTGPENLVASVIMGRI*
Ga0137377_104690353	3300012211	Vadose Zone Soil	YYSPKLARKSDVLELDYVRILFSSRPIMSGPEDLVANVIMGQL*
Ga0137386_102566371	3300012351	Vadose Zone Soil	GRQSDLLELDYVRILFHSKPIMSGPEDLVATVIMGQL*
Ga0137371_100889371	3300012356	Vadose Zone Soil	KTDVLELDYARILFHSKPIMSGPDDLVATILMGRV*
Ga0137384_100995113	3300012357	Vadose Zone Soil	YAAFTQDDTRIYYSPKLGRKTDVLELDYVRILFRSKPIMSGPEDLIAQVIMGRL*
Ga0137384_109923832	3300012357	Vadose Zone Soil	MHIYFTPKLGRKSDVLELDYVRILFRSKPIMSGPEDLVAAVIMGRF*
Ga0137384_110699442	3300012357	Vadose Zone Soil	VQDGIHIYYSPRLARKSDTMELDYVRVLFRGKLLLTGPENLVASIIMGRI*
Ga0137384_114285111	3300012357	Vadose Zone Soil	PKLARKSDVLELDYVRILFSSRPIMSGPEDLVANVIMGRL*
Ga0137385_101653622	3300012359	Vadose Zone Soil	VRIYYAPKLGRKSDVLELDYVRLLFHSRPVLSGPDDLVATILMGRI*
Ga0137385_105256591	3300012359	Vadose Zone Soil	CRYASFMQDGIHIYYSPRLARKSDTMELDYVRVLFRGKLLFTGPENLVASVIMGRI*
Ga0137385_112826362	3300012359	Vadose Zone Soil	KLGRKSDVLEFDYVRILFRSKPIMSGPEDLVAEVVMGRF*
Ga0137361_100100633	3300012362	Vadose Zone Soil	MQDGIHIYYSPRLARKSDSMELDYVRVLFRSRPLMTGPEDLVASVIMGRI*
Ga0137361_102057982	3300012362	Vadose Zone Soil	MQDGVRIYYSSKLGRKSDTLELDYTRILFQSKPIVSGPEELVANVVMGRF*
Ga0137390_100575934	3300012363	Vadose Zone Soil	MQDGIHIYYSPRLARKSDSLELDYVRVLFRSKPLMTGPEDLVASILMGRI*
Ga0137358_110877131	3300012582	Vadose Zone Soil	VQDGLRIYYSPRLSRKSDTLELDYVRVLFRSKPIVSGPENLIAHIIMGRF*
Ga0137419_106118741	3300012925	Vadose Zone Soil	KLASKSDVLELDYVRILFASRPIMSGPEDLVANVIMGQL*
Ga0126369_129277802	3300012971	Tropical Forest Soil	GRYESFDQDGTRVYYSPGLGRKSNVLEFDYVRILFRSKPIMSGPEELVAEVIMGRF*
Ga0120158_100402372	3300013772	Permafrost	MQDDVRIYYSPKLGRKSDVLELDYVRTLFRSRPMVSGPEELLAQVVMGRF*
Ga0120158_102177531	3300013772	Permafrost	MQDGVQFYYSPRLARKSNLLELDYVRVLFKNKPIMSGPEELVANVVMGRF*
Ga0134085_103892282	3300015359	Grasslands Soil	GVKVYYSLQLGRKADVLELDYVRTLFRSRPQLSGPEELLAQIIMGRF*
Ga0182033_104727402	3300016319	Soil	VQDGTRIYYSPKLGRKSKVLELDYVRVLFRSKPIMSGPEDLVAEVIMGRY
Ga0187812_10110561	3300017821	Freshwater Sediment	KSFDQDGTRIYYTPRLGRKSDVLEFDYVRILFRSKPIMSGPEDLVAEVIMGRF
Ga0187806_11690201	3300017928	Freshwater Sediment	HIYYSPKLGGQSDILELDYVRILFRSKPLMTGPENLLANVIMGRI
Ga0187819_100023971	3300017943	Freshwater Sediment	MQDGIHIYYSPKLGGQSDALELDYVRILFRSKPLVTGPENLLANVIMGRI
Ga0187779_101235961	3300017959	Tropical Peatland	GRYESFDQDGMRIYYSAKLGNKSDVLEFDYVRILFRSKPIMSGPEDLMAEVIMGRF
Ga0187776_101582592	3300017966	Tropical Peatland	MRIYYSPKLGSKSDVLEFDYVRILFRSKPIMSGPEDLVAEVIMGRF
Ga0187780_100643432	3300017973	Tropical Peatland	MRIYYSAKLGSKSDVLEFDYVRILFRSKPIMSGPEDLMAEVIMGRF
Ga0187777_102452392	3300017974	Tropical Peatland	MRIYYSPKLGSKSDVLEFDYVRILFRSKPIMSGPEDLMAEVIMGRF
Ga0187782_114563331	3300017975	Tropical Peatland	MRIYYSPKLGRKSDILELDYVRILFRSKPILSGPDELVATVIMGRV
Ga0187767_100175972	3300017999	Tropical Peatland	MRIYYSAKLGNKSDVLEFDYVRILFRSKPIMSGPEDLMAEVIMGRF
Ga0066655_113221371	3300018431	Grasslands Soil	YESFEQDGTRIYYTPKLGRKSDVLEFDYVRILFRSKPIMSGPEDLVAEVIMGRF
Ga0066662_120649812	3300018468	Grasslands Soil	LGRKSDVLELDYVRILFRSKPIMSGPEDLVAAVIMGRF
Ga0066669_111539522	3300018482	Grasslands Soil	MATQLRVDPLGRKSDMLEFDYVRILFRSKPIMSGPEDLVAEVIMGRF
Ga0066669_111557541	3300018482	Grasslands Soil	PDRYESFMQDGLRIYYSPKLGRDTLELDYVRILFSSKPILSGPEELVAKVVMVRF
Ga0215015_101287992	3300021046	Soil	VQDGLRIYYSPRLSRKSDTFELDYVRVLFRSKPIVSGPENLIAHIIMGRF
Ga0213882_101977471	3300021362	Exposed Rock	HYESFVQDGLRIYYSPKLARKSDVLELDYVRVLFRNKPLLSGPEELVASIVMGRF
Ga0187846_100394862	3300021476	Biofilm	MQDGIHVYYSPRLARKSDSMELDYVRFLFRSKPLMTGPEELVASVIMGRI
Ga0126371_106480242	3300021560	Tropical Forest Soil	MQDGIHVYYSPGLARKSNTMELDYVRVLFRSKPLMTGPEDLVASVIMGRI
Ga0212123_100327182	3300022557	Iron-Sulfur Acid Spring	VQDGISIYYTPTLERKSATLELDYMRLLFHSRAIMSGPEELIAQVIMGRL
Ga0212123_100743583	3300022557	Iron-Sulfur Acid Spring	MQDGLRIYYSPKLGYKSDILELDYVRVLFRSKPIMSGPEELVAKVVMGRF
Ga0212123_108373242	3300022557	Iron-Sulfur Acid Spring	RIYYSPKLGRKSDLLELDYVRILFHSKPVLSGPDNLVATILMGRL
Ga0207653_100312352	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	YSPRLGRKSDILELDYMRVLFRSKPILSGPENLIANIIMGHF
Ga0207684_102560323	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RRSELLELDYVRTLFRSKPMMTGPEDLVASVLTGHL
Ga0209235_11594831	3300026296	Grasslands Soil	LTQDGVKVYYSLKLGRKADVLELDYVRTLFRSKPQLSGPEELLAQIIMGRF
Ga0209237_11492192	3300026297	Grasslands Soil	LTQDGVKVYYSLQLGRKAEVLELDYVRTLFRSKPQLSGPEELLAQIIMGRF
Ga0209647_11691232	3300026319	Grasslands Soil	VQDGMRIYYSPRLSRKSDTLELDYVRVLFRSKPIVSGPENLIATIIMGRF
Ga0209647_13031552	3300026319	Grasslands Soil	IHIYYSPRLARKSDSLELDYVRVLFRSKPLMTGPEDLVASILMGRI
Ga0257170_10495461	3300026351	Soil	EDLNRYESFVQDGMRIYYSPRLSRKSDTLELDYVRVLFRSKPIVSGPENLIATIIMGRF
Ga0257180_10045212	3300026354	Soil	MRIYYSPRLSRKSDTLELDYVRVLFRSKPIVSGPENLIANIIMGRF
Ga0257158_10632491	3300026515	Soil	FVQDDVRIYYSPKLARKSDVLELDYVRILFASRPIMSGPEELVANVILGQL
Ga0209056_105833032	3300026538	Soil	VKVYYSLQLGRKAEVLELDYVRTLFRSKPQLSGPEELLAQIIMGRF
Ga0209648_100003211	3300026551	Grasslands Soil	PKLGRKSDVLELDYARLLFHSKPIMSGPDDLVATILMGRI
Ga0209648_100029032	3300026551	Grasslands Soil	MQNDIHIYYSPRLARKSDSMELDYVRVLFRGKPLMTGPEDLVASIIMGRI
Ga0209648_103701211	3300026551	Grasslands Soil	MRIYYSPRLGRKSDTLELDYVRLLFRSRPIVSGPENLIAQVIMGRL
Ga0209648_105412651	3300026551	Grasslands Soil	PKLGHKSDVLELDFVRLLFRSRPIMSGPEDLLAKVIMGRI
Ga0209577_100691062	3300026552	Soil	MQDGLRIYYSPKLGRDTLELDYMRILFSSKPILSGPEELVAKVVMGRF
Ga0209810_100109820	3300027773	Surface Soil	VRIYYTPKLERKTDVLELDYVRFLFHGRPLMTGPETLLATIIMARI
Ga0209180_100146144	3300027846	Vadose Zone Soil	MQDGIHIYYSPRLARKSDSLELDYVRVLFRSKPLMTGPEDLVASILMGRI
Ga0209180_100158254	3300027846	Vadose Zone Soil	MRIYYSPRLGSKSDTLELDYVRILFRSKPIVSGPENLIAQVIMGRL
Ga0209180_100550612	3300027846	Vadose Zone Soil	MQDGIHIYYSARLARKSDSMELDYVRVLFRSKPLMTGPEDLVASIIMGRL
Ga0209166_100764421	3300027857	Surface Soil	RIYYTPRLGRKSDVLELDYVRLLFRSRPIMSGPEDLLAKVIMGRM
Ga0209701_102428202	3300027862	Vadose Zone Soil	MQDGIHIYYSPRLARKSDSMELDYVRVLFRSKPLMTGPEDLVASVIMGRI
Ga0209283_105517421	3300027875	Vadose Zone Soil	VRIYYSPKLGRKSDVLELDYARLLFHSKPVLSGPDNLVATIL
Ga0209590_106128342	3300027882	Vadose Zone Soil	YSPKLGRDTLELDYVRILFSSKPILSGPEELVAKVVMGRF
Ga0209583_104101052	3300027910	Watersheds	VQIYFSPKLGRKADVMELDYVRTLFRSRPQLSGPEELLAQVIMGRF
Ga0209698_105667692	3300027911	Watersheds	MRIYYTPRLGRKSDVLEFDYVRILFRSKPIMSGPEDLVAGVIMGRF
Ga0209698_113449171	3300027911	Watersheds	VQIYFSPKLGRKADVMELDYVRSLFRSRPQLSGPEELLAQVIMGRF
Ga0311301_104494792	3300032160	Peatlands Soil	LRIYYTPKLARQSDVLELDFARVLFRNRPVLVGPEELLAQVVMGRV
Ga0311301_120886841	3300032160	Peatlands Soil	PKLGRKSDVLELDYVRILFRSKPIMSGPEDLVAAVIMGRF
Ga0314862_0117009_379_519	3300033803	Peatland	MRIYYSPRLGNKSDVLEFDYVRILFRSKPIMSGPEHLVAEVIMGRF
Ga0326723_0437485_242_394	3300034090	Peat Soil	VQDGTRIYYSPKLGRKSDVLELDYVRVLFRSKPIMSGPEDLVAEVIMGRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040242

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences