Metagenome / Metatranscriptome Family F040241

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040241
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	63 residues
Representative Sequence	MTTEEVLKALGRYTEESCESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Number of Associated Samples	109
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	54.94 %
% of genes from short scaffolds (< 2000 bps)	82.72 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.111 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.901 % of family members)
Environment Ontology (ENVO)	Unclassified (39.506 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.926 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.35% β-sheet: 0.00% Coil/Unstructured: 51.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.35.1.7: CUT domain	d2d5va1	2d5v	0.73557
a.35.1.7: CUT domain	d2o4aa2	2o4a	0.70452
a.35.1.7: CUT domain	d1wh8a1	1wh8	0.69841
a.35.1.1: POU-specific domain	d1ic8a2	1ic8	0.68626
a.35.1.3: SinR domain-like	d2xi8a_	2xi8	0.67915

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF11799	IMS_C	4.94
PF13533	Biotin_lipoyl_2	4.32
PF02861	Clp_N	3.09
PF04519	Bactofilin	2.47
PF16576	HlyD_D23	1.85
PF07399	Na_H_antiport_3	1.85
PF03050	DDE_Tnp_IS66	1.23
PF13377	Peripla_BP_3	1.23
PF13560	HTH_31	1.23
PF12700	HlyD_2	0.62
PF04397	LytTR	0.62
PF01799	Fer2_2	0.62
PF02518	HATPase_c	0.62
PF00291	PALP	0.62
PF03413	PepSY	0.62
PF08734	GYD	0.62
PF01568	Molydop_binding	0.62
PF07508	Recombinase	0.62
PF01507	PAPS_reduct	0.62
PF14707	Sulfatase_C	0.62
PF03446	NAD_binding_2	0.62
PF00160	Pro_isomerase	0.62
PF13518	HTH_28	0.62
PF03279	Lip_A_acyltrans	0.62
PF02705	K_trans	0.62
PF14373	Imm_superinfect	0.62
PF00400	WD40	0.62
PF07694	5TM-5TMR_LYT	0.62
PF05016	ParE_toxin	0.62
PF04851	ResIII	0.62
PF14690	zf-ISL3	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	3.09
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	2.47
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.23
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.62
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.62
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.62
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.62
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.62
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
All Organisms	root	All Organisms	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
cellular organisms	root	All Organisms → cellular organisms	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.09 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.23 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.62 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12.35 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.47 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	1.23 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	0.62 %
bacterium HR32	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR32	0.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.62 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.09 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	2.47 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	1.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.62 %
unclassified Candidatus Hydrogenedentes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes	0.62 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.62 %
bacterium HR32	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR32	0.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	2.47 %
Candidatus Xiphinematobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Candidatus Xiphinematobacter	1.85 %
Treponemataceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae	1.23 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.23 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.62 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
bacterium HR32	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR32	0.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Lactobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	2.47 %
unclassified Candidatus Xiphinematobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Candidatus Xiphinematobacter → unclassified Candidatus Xiphinematobacter	1.85 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.23 %
Treponema	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema	1.23 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.62 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
bacterium HR32	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR32	0.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Limosilactobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus	2.47 %
Candidatus Xiphinematobacter sp. Idaho Grape	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Candidatus Xiphinematobacter → unclassified Candidatus Xiphinematobacter → Candidatus Xiphinematobacter sp. Idaho Grape	1.85 %
Treponema saccharophilum	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema → Treponema saccharophilum	1.23 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.62 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.62 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
bacterium HR32	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR32	0.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Limosilactobacillus oris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus oris	1.85 %
Candidatus Xiphinematobacter sp. Idaho Grape	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Candidatus Xiphinematobacter → unclassified Candidatus Xiphinematobacter → Candidatus Xiphinematobacter sp. Idaho Grape	1.85 %
Treponema saccharophilum	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema → Treponema saccharophilum	1.23 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.62 %
Limosilactobacillus antri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus antri	0.62 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.62 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
bacterium HR32	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR32	0.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Limosilactobacillus oris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus oris	1.85 %
Candidatus Xiphinematobacter sp. Idaho Grape	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Candidatus Xiphinematobacter → unclassified Candidatus Xiphinematobacter → Candidatus Xiphinematobacter sp. Idaho Grape	1.85 %
Treponema saccharophilum	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema → Treponema saccharophilum	1.23 %
Chthoniobacter flavus Ellin428	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	0.62 %
Limosilactobacillus antri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus antri	0.62 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.62 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.62 %
bacterium HR32	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR32	0.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002GDR4M	Not Available	524	Open in IMG/M
2170459006\|GBPF9FW02FQFYR	Not Available	513	Open in IMG/M
2170459009\|GA8DASG02JMV0G	Not Available	511	Open in IMG/M
3300000956\|JGI10216J12902_100448384	Not Available	714	Open in IMG/M
3300001867\|JGI12627J18819_10096530	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300001867\|JGI12627J18819_10170161	Not Available	884	Open in IMG/M
3300001867\|JGI12627J18819_10305105	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300002245\|JGIcombinedJ26739_100167853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2075	Open in IMG/M
3300002245\|JGIcombinedJ26739_100387563	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300002914\|JGI25617J43924_10171344	Not Available	729	Open in IMG/M
3300002914\|JGI25617J43924_10258494	Not Available	591	Open in IMG/M
3300003219\|JGI26341J46601_10008220	All Organisms → cellular organisms → Bacteria	3429	Open in IMG/M
3300003219\|JGI26341J46601_10072203	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300003219\|JGI26341J46601_10176610	Not Available	587	Open in IMG/M
3300003219\|JGI26341J46601_10201300	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300003368\|JGI26340J50214_10004549	All Organisms → cellular organisms → Bacteria → Proteobacteria	4514	Open in IMG/M
3300003368\|JGI26340J50214_10155591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus antri	571	Open in IMG/M
3300003505\|JGIcombinedJ51221_10129939	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema → Treponema saccharophilum	1013	Open in IMG/M
3300005332\|Ga0066388_100673012	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300005436\|Ga0070713_101579055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	637	Open in IMG/M
3300005437\|Ga0070710_10795599	Not Available	675	Open in IMG/M
3300005445\|Ga0070708_100181470	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300005445\|Ga0070708_100374967	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005467\|Ga0070706_100427559	Not Available	1232	Open in IMG/M
3300005468\|Ga0070707_100351924	Not Available	1430	Open in IMG/M
3300005536\|Ga0070697_100952343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus oris	762	Open in IMG/M
3300005764\|Ga0066903_101902457	Not Available	1140	Open in IMG/M
3300005764\|Ga0066903_105476297	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_107920397	Not Available	545	Open in IMG/M
3300006028\|Ga0070717_11438810	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006174\|Ga0075014_100967636	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema → Treponema saccharophilum	514	Open in IMG/M
3300006175\|Ga0070712_100634654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus oris	906	Open in IMG/M
3300006175\|Ga0070712_101497876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Limosilactobacillus → Limosilactobacillus oris	589	Open in IMG/M
3300006796\|Ga0066665_11528322	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009088\|Ga0099830_11540394	Not Available	554	Open in IMG/M
3300009523\|Ga0116221_1491108	Not Available	537	Open in IMG/M
3300009683\|Ga0116224_10550399	Not Available	551	Open in IMG/M
3300009792\|Ga0126374_11904582	Not Available	500	Open in IMG/M
3300010048\|Ga0126373_10010170	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	7573	Open in IMG/M
3300010048\|Ga0126373_12742196	Not Available	550	Open in IMG/M
3300010339\|Ga0074046_10024618	All Organisms → cellular organisms → Bacteria	4167	Open in IMG/M
3300010339\|Ga0074046_10047051	Not Available	2877	Open in IMG/M
3300010339\|Ga0074046_10131607	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300010341\|Ga0074045_10278255	Not Available	1101	Open in IMG/M
3300010341\|Ga0074045_10511087	Not Available	771	Open in IMG/M
3300010343\|Ga0074044_10134804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1656	Open in IMG/M
3300010343\|Ga0074044_10186691	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR32	1380	Open in IMG/M
3300010343\|Ga0074044_10638696	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300010360\|Ga0126372_11857180	Not Available	647	Open in IMG/M
3300010361\|Ga0126378_10245040	All Organisms → cellular organisms → Bacteria	1884	Open in IMG/M
3300010366\|Ga0126379_11498913	Not Available	780	Open in IMG/M
3300010376\|Ga0126381_104376130	Not Available	546	Open in IMG/M
3300010379\|Ga0136449_100831525	Not Available	1519	Open in IMG/M
3300010379\|Ga0136449_103630002	Not Available	585	Open in IMG/M
3300011269\|Ga0137392_11356913	Not Available	570	Open in IMG/M
3300012202\|Ga0137363_10932974	Not Available	737	Open in IMG/M
3300012361\|Ga0137360_10032426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3626	Open in IMG/M
3300012362\|Ga0137361_10873476	Not Available	816	Open in IMG/M
3300012582\|Ga0137358_10001265	All Organisms → cellular organisms → Bacteria	13425	Open in IMG/M
3300012923\|Ga0137359_11018340	Not Available	710	Open in IMG/M
3300012923\|Ga0137359_11112470	Not Available	676	Open in IMG/M
3300012923\|Ga0137359_11357003	Not Available	599	Open in IMG/M
3300012948\|Ga0126375_11246956	Not Available	621	Open in IMG/M
3300012971\|Ga0126369_12380169	Not Available	616	Open in IMG/M
3300012971\|Ga0126369_12979206	Not Available	554	Open in IMG/M
3300012989\|Ga0164305_11369595	Not Available	621	Open in IMG/M
3300016270\|Ga0182036_10428511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1036	Open in IMG/M
3300016341\|Ga0182035_10724135	Not Available	868	Open in IMG/M
3300016341\|Ga0182035_10779047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	838	Open in IMG/M
3300016357\|Ga0182032_11471141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	591	Open in IMG/M
3300016371\|Ga0182034_11429257	Not Available	605	Open in IMG/M
3300016371\|Ga0182034_11481912	Not Available	594	Open in IMG/M
3300016387\|Ga0182040_11811693	Not Available	522	Open in IMG/M
3300016404\|Ga0182037_10393010	Not Available	1141	Open in IMG/M
3300016404\|Ga0182037_10419462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Candidatus Xiphinematobacter → unclassified Candidatus Xiphinematobacter → Candidatus Xiphinematobacter sp. Idaho Grape	1107	Open in IMG/M
3300016445\|Ga0182038_10452106	Not Available	1087	Open in IMG/M
3300020579\|Ga0210407_10022815	All Organisms → cellular organisms → Bacteria	4650	Open in IMG/M
3300020580\|Ga0210403_10114735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2190	Open in IMG/M
3300020581\|Ga0210399_10355342	Not Available	1223	Open in IMG/M
3300021170\|Ga0210400_10412642	Not Available	1114	Open in IMG/M
3300021171\|Ga0210405_10965462	Not Available	644	Open in IMG/M
3300021178\|Ga0210408_10127771	Not Available	2007	Open in IMG/M
3300021403\|Ga0210397_10179862	Not Available	1499	Open in IMG/M
3300021405\|Ga0210387_10090604	Not Available	2540	Open in IMG/M
3300021432\|Ga0210384_10175544	Not Available	1925	Open in IMG/M
3300021560\|Ga0126371_10068395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3446	Open in IMG/M
3300021560\|Ga0126371_10550998	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300021560\|Ga0126371_11994107	Not Available	698	Open in IMG/M
3300022501\|Ga0242645_1022557	Not Available	566	Open in IMG/M
3300022528\|Ga0242669_1093683	Not Available	573	Open in IMG/M
3300022530\|Ga0242658_1146974	Not Available	605	Open in IMG/M
3300022530\|Ga0242658_1247698	Not Available	503	Open in IMG/M
3300022531\|Ga0242660_1230542	Not Available	520	Open in IMG/M
3300022716\|Ga0242673_1093324	Not Available	572	Open in IMG/M
3300022722\|Ga0242657_1187816	Not Available	565	Open in IMG/M
3300025916\|Ga0207663_10201151	Not Available	1437	Open in IMG/M
3300025916\|Ga0207663_10774042	Not Available	763	Open in IMG/M
3300025922\|Ga0207646_10857563	Not Available	807	Open in IMG/M
3300025922\|Ga0207646_11416581	Not Available	604	Open in IMG/M
3300026304\|Ga0209240_1291348	Not Available	505	Open in IMG/M
3300026320\|Ga0209131_1050130	Not Available	2360	Open in IMG/M
3300026551\|Ga0209648_10596159	Not Available	609	Open in IMG/M
3300026728\|Ga0208069_102820	Not Available	519	Open in IMG/M
3300026817\|Ga0207775_119998	Not Available	502	Open in IMG/M
3300027034\|Ga0209730_1004982	Not Available	1144	Open in IMG/M
3300027035\|Ga0207776_1049371	Not Available	503	Open in IMG/M
3300027071\|Ga0209214_1025898	Not Available	766	Open in IMG/M
3300027371\|Ga0209418_1009839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1480	Open in IMG/M
3300027603\|Ga0209331_1007022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3007	Open in IMG/M
3300027667\|Ga0209009_1062532	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300027684\|Ga0209626_1004005	Not Available	3248	Open in IMG/M
3300027698\|Ga0209446_1043176	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300027701\|Ga0209447_10032261	All Organisms → cellular organisms → Bacteria → Acidobacteria	1459	Open in IMG/M
3300027727\|Ga0209328_10248617	Not Available	531	Open in IMG/M
3300027812\|Ga0209656_10008201	All Organisms → cellular organisms → Bacteria	6667	Open in IMG/M
3300027812\|Ga0209656_10033679	Not Available	3014	Open in IMG/M
3300027812\|Ga0209656_10034103	All Organisms → cellular organisms → Bacteria	2989	Open in IMG/M
3300027812\|Ga0209656_10185107	Not Available	1019	Open in IMG/M
3300027824\|Ga0209040_10037740	Not Available	3000	Open in IMG/M
3300027824\|Ga0209040_10296626	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300027825\|Ga0209039_10049388	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300027825\|Ga0209039_10063408	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300027825\|Ga0209039_10341916	Not Available	583	Open in IMG/M
3300027829\|Ga0209773_10121052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1085	Open in IMG/M
3300027884\|Ga0209275_10466807	Not Available	717	Open in IMG/M
3300027884\|Ga0209275_10492815	Not Available	698	Open in IMG/M
3300027911\|Ga0209698_10118200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2200	Open in IMG/M
3300031545\|Ga0318541_10766675	Not Available	538	Open in IMG/M
3300031546\|Ga0318538_10327956	Not Available	826	Open in IMG/M
3300031573\|Ga0310915_10234350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1290	Open in IMG/M
3300031573\|Ga0310915_11210104	Not Available	522	Open in IMG/M
3300031719\|Ga0306917_10117543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Candidatus Xiphinematobacter → unclassified Candidatus Xiphinematobacter → Candidatus Xiphinematobacter sp. Idaho Grape	1933	Open in IMG/M
3300031744\|Ga0306918_10337823	Not Available	1167	Open in IMG/M
3300031754\|Ga0307475_10343595	Not Available	1199	Open in IMG/M
3300031799\|Ga0318565_10414237	Not Available	653	Open in IMG/M
3300031820\|Ga0307473_10406395	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300031879\|Ga0306919_10115701	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Candidatus Xiphinematobacter → unclassified Candidatus Xiphinematobacter → Candidatus Xiphinematobacter sp. Idaho Grape	1912	Open in IMG/M
3300031879\|Ga0306919_10224299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1406	Open in IMG/M
3300031879\|Ga0306919_10811735	Not Available	719	Open in IMG/M
3300031879\|Ga0306919_11161618	Not Available	587	Open in IMG/M
3300031890\|Ga0306925_10104283	All Organisms → cellular organisms → Bacteria → Proteobacteria	3020	Open in IMG/M
3300031890\|Ga0306925_11935551	Not Available	559	Open in IMG/M
3300031910\|Ga0306923_11460206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	717	Open in IMG/M
3300031910\|Ga0306923_12012026	Not Available	586	Open in IMG/M
3300031912\|Ga0306921_12408310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	549	Open in IMG/M
3300031946\|Ga0310910_10595823	Not Available	876	Open in IMG/M
3300031946\|Ga0310910_10860225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	712	Open in IMG/M
3300031946\|Ga0310910_11326294	Not Available	555	Open in IMG/M
3300031947\|Ga0310909_10093944	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300031947\|Ga0310909_10313148	Not Available	1316	Open in IMG/M
3300031954\|Ga0306926_10050618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4968	Open in IMG/M
3300031954\|Ga0306926_10135918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3041	Open in IMG/M
3300032001\|Ga0306922_11555963	Not Available	659	Open in IMG/M
3300032059\|Ga0318533_10905214	Not Available	647	Open in IMG/M
3300032059\|Ga0318533_10931827	Not Available	637	Open in IMG/M
3300032160\|Ga0311301_11789609	Not Available	732	Open in IMG/M
3300032261\|Ga0306920_100165899	Not Available	3292	Open in IMG/M
3300032261\|Ga0306920_100232943	All Organisms → cellular organisms → Bacteria	2748	Open in IMG/M
3300032261\|Ga0306920_100857052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1331	Open in IMG/M
3300032261\|Ga0306920_101691304	Not Available	897	Open in IMG/M
3300032261\|Ga0306920_103095971	Not Available	625	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.65%
Aquatic	Environmental → Aquatic	12.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.65%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Sediment	Environmental → Aquatic → Sediment	1.23%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.88%
Loam	Environmental → Terrestrial → Soil → Loam	22.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.23%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.28%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.70%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.09%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022501	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026728	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN412 (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_02141380	2170459003	Grass Soil	MTTEEVLKALERYKEESPESDRQTATKLGVHPMTLTAWLGGRERPQRCMLARLAGFLRRVGYL
L01_07082180	2170459006	Grass Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYF
F47_10674380	2170459009	Grass Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPKKCTLARLAGFLRRVGYL
JGI10216J12902_1004483842	3300000956	Soil	RYTEESRESDRQTATKLGVNRTTLTAWLGGRDKPQRCMLARLAGFLRRVGYL*
JGI12627J18819_100965302	3300001867	Forest Soil	MTTEDVLRALGRYTEESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
JGI12627J18819_101701611	3300001867	Forest Soil	AYMSTEEVLKALERYAEEAGESGRQTATKLGVNRRMLTAWLSGEDRPQPCMLARLAGFLRRVGYL*
JGI12627J18819_103051052	3300001867	Forest Soil	RMTTEEVLKALGRYAKESCESDRQTATKLGVKRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
JGIcombinedJ26739_1001678534	3300002245	Forest Soil	MTTEEVLKALERYAEESRESDRQTATKLGVKRMTLTAWLGGRDRPHRRMLARLAGFLRRVGYL*
JGIcombinedJ26739_1003875633	3300002245	Forest Soil	PSACMTTEEVLKALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRDRPQRCMLARLAGFLRRVGYL*
JGI25617J43924_101713442	3300002914	Grasslands Soil	MSTEEVLKALERYTEEARESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFLRRAGYL*
JGI25617J43924_102584941	3300002914	Grasslands Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYL*
JGI26341J46601_100082204	3300003219	Bog Forest Soil	MTTEEVLKALGRYTEESRESDRQTAAKLGVNRMTLIAWLGGRDRPQRCMLARLAGFLRRVGYL*
JGI26341J46601_100722031	3300003219	Bog Forest Soil	TPAMSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCKLARLAGFLRRVGYL*
JGI26341J46601_101766101	3300003219	Bog Forest Soil	ARMTTEEVLKALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRDRPQRCMLARLAGFLRRVGYL*
JGI26341J46601_102013001	3300003219	Bog Forest Soil	QTPAMSTEEVLQALTRYTKETNDSERQTATKLGINCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYL*
JGI26340J50214_100045491	3300003368	Bog Forest Soil	MTTEEVLKALGRYTEESCESDRQTATKLGVKRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
JGI26340J50214_101555911	3300003368	Bog Forest Soil	RMTTEEVLKALGRYKEESRESDRQTATKLGVNQMTMTAWLGGRDRPQRCMLARLAGFLRRVGYL*
JGIcombinedJ51221_101299391	3300003505	Forest Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPEKCTLARLAGFLRRVGYL*
JGIcombinedJ51221_102727642	3300003505	Forest Soil	PSSRVASSSARMTTEEVLKALERYKEESPESDRQTATKLGVHPMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0066388_1006730122	3300005332	Tropical Forest Soil	MTTEEVLKALGRYTKESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0070713_1015790551	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEEVLKALERYTEEARESDRQTATKLGINRMTLTAWLGGRDRPQRCMLARLAGFLRRAGYL*
Ga0070710_107955992	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEVLQALGRYARDSNQSDRRMATQLGISRVTLSDWLGGKDQPHKCVLARVAGFLRRVGYL*
Ga0070708_1001814701	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEEVLQALTRYTKETNDSKRQTATKLGVNCMTLSTWLHGKEPPQKCTLARLAG
Ga0070708_1003749672	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDEVLKALGRYTEESCESDRQTATKLGVNRMMLNAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0070706_1004275592	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEVLEALGRYTEESPESERQTATKLGVNRTTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0070707_1003519241	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEEVLQALTRYTKETNDSKRQTATKLDVNCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYL*
Ga0070697_1009523431	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VALPSARMTTEEVLEALGRYTEESPESERQTATKLGVNRTTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0066903_1019024572	3300005764	Tropical Forest Soil	RVALPSARMTTEDVLRALGRYTEETSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0066903_1054762971	3300005764	Tropical Forest Soil	MTTEEVLQALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0066903_1079203972	3300005764	Tropical Forest Soil	MTTEEVLEALGRYTEESRDSERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0070717_114388101	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEVLEALGRYTEESPESERQTATKLGVNGTTLTAWLGGRDRPQRCMLARLAGFLRR
Ga0075014_1009676361	3300006174	Watersheds	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCTLARLA
Ga0070712_1006346541	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEVLKALGRYTEESCESDRQTATKLGVKRMTLTAWLGGRDRPQRCMLARLAG
Ga0070712_1014978761	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEVLQALGRYAKESCESDRQTATKLGVKRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0066665_115283222	3300006796	Soil	MTTEEVLKALGRYTQESHETDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARIAGFFETRWPSVGVAGDHAAG*
Ga0099830_115403941	3300009088	Vadose Zone Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCTLARLAGF
Ga0116221_14911081	3300009523	Peatlands Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVDCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYL*
Ga0116224_105503991	3300009683	Peatlands Soil	EVLKALERYKEESRESDRQTATKLGVNRMTMTAWLGGRERPQRCMLARLAGFLRRVGYL*
Ga0126374_119045821	3300009792	Tropical Forest Soil	MTTEEVLEALGRYAEESRESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0126373_1001017012	3300010048	Tropical Forest Soil	AALPSPRMSTEEVLKSLERYTEESGESDHETATKLGVKGSTLTGWLSGKDRPQRSMLARLAGFLRRVGYL*
Ga0126373_127421961	3300010048	Tropical Forest Soil	MTTEEVLKALGRYTKESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRV
Ga0074046_100246185	3300010339	Bog Forest Soil	EEVLKALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0074046_100470512	3300010339	Bog Forest Soil	MTTEEVLQALGRYTEESRESDRQTATKLGVNRMTLSAWLGGRDRPQRFMLARLAGFLRRVGYL*
Ga0074046_101316073	3300010339	Bog Forest Soil	MTTDEVLQALGRYSKESKQSDRMTATQLGISRMTLSDWLGGKDQPQKCVLARLAGFLRRVGYL*
Ga0074045_102782551	3300010341	Bog Forest Soil	EVLQALTRYTKETNDSERQTATKLGVNCMTLNTWLHGKEPPQKCTLARLAGFLRRVGYL*
Ga0074045_105110871	3300010341	Bog Forest Soil	MSTEEVLKALGRYTEESPESDRQTATKLGVNRMTLTAWLGGRDRPQRYAGEVSGFFETRWLFVGCGWTRLSAAL*
Ga0074044_101348044	3300010343	Bog Forest Soil	MSTEEVLKALWRYTEESPESDRQTATKLGVNRMTLTAWLGGRDRPQRYAGEVSGFFETRWLFVGCGWTRLSAAL*
Ga0074044_101866912	3300010343	Bog Forest Soil	SRVALPSARMTTEEVLKALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRDRPQRYMLARLAGFLRRVGYL*
Ga0074044_106386961	3300010343	Bog Forest Soil	LQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKYTLARLAGFLRRVGYL*
Ga0126372_118571801	3300010360	Tropical Forest Soil	MTTEDVLKALGRYTEESQESERQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFL
Ga0126378_102450401	3300010361	Tropical Forest Soil	MTTEEVLKALGRYTKESSESERQTATKLGVKRLTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0126379_114989131	3300010366	Tropical Forest Soil	LARSHPAALPSPRMSTEEVLKSLERYTEESGESDHETATKLGVKGSTLTGWLSGKDRPQRSMLARLAGFLRRVGYL*
Ga0126381_1043761301	3300010376	Tropical Forest Soil	MTTEDVLRALGRYTEETSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0136449_1008315252	3300010379	Peatlands Soil	MTTEEVLKALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRERPQRCMLARLAGFLRRVGYL*
Ga0136449_1036300021	3300010379	Peatlands Soil	RYTEESRESDRQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0137392_113569132	3300011269	Vadose Zone Soil	YTEESRESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0137363_109329742	3300012202	Vadose Zone Soil	RMTTEEVLKALGRYTEESCESDRQTATKLGVKRMTLTAWVGGRDRPQRCMLARLAGFLRRVGYL*
Ga0137360_100324264	3300012361	Vadose Zone Soil	MTTDEVLQALGRYTEESCESDRQTATKLGVNRMILNAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0137361_108734762	3300012362	Vadose Zone Soil	AMSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCTLARLADELTI
Ga0137358_100012656	3300012582	Vadose Zone Soil	MSTEEVLRALERYTEESPESDRQTATKLGVNQMTLTSWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0137359_110183401	3300012923	Vadose Zone Soil	TEEVLKALGRYTEESRESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0137359_111124703	3300012923	Vadose Zone Soil	ALPSTRMSTEEVLKALERYTEEARESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFLRRAGYL*
Ga0137359_113570031	3300012923	Vadose Zone Soil	GPSSRVALPSARMTTEEVLEALGRYTEESPESERQTATKLGVNRTTLTAWLGGRDRPQRCMLARLAGFLRRVGYL*
Ga0126375_112469562	3300012948	Tropical Forest Soil	SRVALSSARMTTEEVLQALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0126369_123801691	3300012971	Tropical Forest Soil	VLKALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0126369_129792061	3300012971	Tropical Forest Soil	MTTEDVLEALGRYKEESRESERQTATKLGVNRTTLTAWLGGKDRPQRFMLARLAGFLRRVGYL*
Ga0164305_113695951	3300012989	Soil	MTTDEVLKALGRYTEESCESDRQTATKLGVNRMMLNAWLGGTDRPQRCMLARLAG
Ga0182036_104285112	3300016270	Soil	LGRYTEESSESERQTATKLGVKRMTLTAWLGGKGRPQRFMLARLAGFLRRVGYL
Ga0182035_107241352	3300016341	Soil	VALPSARMTTEDVLRALGRYTEESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0182035_107790471	3300016341	Soil	VALPSARMTTEDVLRALGRYKEESHESERQTATKLGVNRTTLTAWLGGRDRPQRFMLARLAGFLRRVGYL
Ga0182032_114711411	3300016357	Soil	VLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLKRVGYL
Ga0182034_114292571	3300016371	Soil	PPSRVALSSARMTTEEVLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0182034_114819121	3300016371	Soil	ALGRYTEESSESERQTATKLGVKRMTLTAWLGGKGRPQRFMLARLAGFLRRVGYL
Ga0182040_118116931	3300016387	Soil	MTTEDVLRALGRYTEESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGSLRRVGYL
Ga0182037_103930102	3300016404	Soil	MTTEEVLRALGRYKEESRESERQTATKLGVNRTTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0182037_104194621	3300016404	Soil	VALPSARMTTEEVLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0182038_104521062	3300016445	Soil	MTTEDVLRALGRYKEESHESERQTATKLGVNRTTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0210407_100228152	3300020579	Soil	MTTEEVLKALERYKEESPESDRQTATKLGVHPMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0210403_101147352	3300020580	Soil	MTAEEVLQALGRYTEESSESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARIAGFLRRVGYL
Ga0210399_103553421	3300020581	Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPEKCTLARLAGFLR
Ga0210400_104126422	3300021170	Soil	MSTEEILKALERYTEASGESERQTAAKLGVNLRALTAWLSGRDRPPRPMLARLAGFLSR
Ga0210405_109654621	3300021171	Soil	MTTEEVLEALGRYTAELPESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARL
Ga0210408_101277711	3300021178	Soil	RMTTEEVLKALGRYAEESSESDRQTATKLGVHPMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0210397_101798622	3300021403	Soil	MTTEEVLKALERYKEESPESDRQTATKLGVHPMALTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0210387_100906042	3300021405	Soil	MTTEEVLKALGRYAEESSESDRQTATKLGVHPMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0210384_101755442	3300021432	Soil	MSTEEILKALERYTEASGESERQTAAKLGVNLRALTAWLSGRDRPPRPMLAGFLSRVGY
Ga0126371_100683952	3300021560	Tropical Forest Soil	MTTEDVLKALGRYTEESHESERQTATKLGVKRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0126371_105509982	3300021560	Tropical Forest Soil	MTTEEVLKALGRYTKESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0126371_119941072	3300021560	Tropical Forest Soil	MTTEEVLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0242645_10225571	3300022501	Soil	MTAEEVLQALGRYTEESSESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARIAGFLRR
Ga0242669_10936831	3300022528	Soil	MNAEEVLQALGRYTEESPESDRQTATRLGVNRMTLIAWLGGRGRPQRCMLARIAGFFETCWLFVV
Ga0242658_11469741	3300022530	Soil	MTAEEVLQALGRYTEESSESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARIAGF
Ga0242658_12476981	3300022530	Soil	MTTEEVLKALGRYAEESSESDRQTATKLGVKRMTLTAWLGGRDRPQRCMLARL
Ga0242660_12305421	3300022531	Soil	MTTEEVLQALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRDRPQRCMLARLA
Ga0242673_10933241	3300022716	Soil	MTAEEVLQALGRYTEESSESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARIAGFFETCWL
Ga0242657_11878161	3300022722	Soil	MTTEEVLKALGRYAEESSESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARIAGFL
Ga0207663_102011511	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEVLKALGRYTEESCESDRQTATKLGVKRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0207663_107740421	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYL
Ga0207646_108575633	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEEVLKALERYTEEASESDRQTATKLGVNRMTLTAWLGGKDRPQRCMLARLAGFLRRAGYL
Ga0207646_114165811	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEEVLQALTRYTKETNDSKRQTATKLDVNCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYL
Ga0209240_12913482	3300026304	Grasslands Soil	TEEVLKALGRYTEESSESDRQTATKLGINRMTLTAWLRGRDRPQRRILARLAGFLRRVGY
Ga0209131_10501303	3300026320	Grasslands Soil	MSTEEVLRALERYTEESPESDRQTATKLGVNRMTLTSWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0209648_105961591	3300026551	Grasslands Soil	RVALLSTRMTTEEVLKALGRYTEESRESDRQTATKLGVKRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0208069_1028202	3300026728	Soil	MTTEEVLKALERYTEEARESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0207775_1199981	3300026817	Tropical Forest Soil	MSTEEVLRALGRYTEESRESDRQTAAKLGVNRMTLNAWLVGRDRPQRCMLARLAG
Ga0209730_10049822	3300027034	Forest Soil	MTTEDVLRALGRYTEESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0207776_10493711	3300027035	Tropical Forest Soil	RVALPSARMSTEEVLRALGRYTEESRESDRQTAAKLGVNRMTLNAWLVGRDRPQRCMLARLAGFLRRVGYL
Ga0209214_10258981	3300027071	Forest Soil	MSTKEVLKALERYAEESGESDHQTATKLGVNRRMLTAWLSGEDRPQPCMLARL
Ga0209418_10098392	3300027371	Forest Soil	MTTEDVLRALGRYAEESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0209331_10070222	3300027603	Forest Soil	MSTEEVLRALERYTEESSESDRQTATKLGVNRMTLTAWLVGRDRPQRCILARLADFLRRVGYL
Ga0209009_10625322	3300027667	Forest Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCTLARLAVFLRRVGYL
Ga0209626_10040052	3300027684	Forest Soil	MTTEEVLKALGRYTEESCESDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0209446_10431761	3300027698	Bog Forest Soil	TTEEVLKALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRDRPQRYMLARLAGFLRRVGYL
Ga0209447_100322612	3300027701	Bog Forest Soil	MTTEEVLKALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRDRPQRYMLARLAGFLRRVGYL
Ga0209328_102486171	3300027727	Forest Soil	MSTEEVLRALERYTEESSESDRQTATKLGVNRMTLTAWLVGRDRPQRCILARLADFLRR
Ga0209656_100082015	3300027812	Bog Forest Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLNTWLHGKEPPQKCTLARLAGFLRRVGYL
Ga0209656_100336791	3300027812	Bog Forest Soil	ALPSARMTTEEVLKALGRYKEESRESDRQTATKLGVNQMTMTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0209656_100341034	3300027812	Bog Forest Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKYTLARLAGFLRRVGYL
Ga0209656_101851071	3300027812	Bog Forest Soil	MTTDEVLQALGRYSKESKQSDRMTATQLGISRMTLSDWLGGKDQPQKCVLARLAGFLRRVGYL
Ga0209040_100377401	3300027824	Bog Forest Soil	RMTTEEVLKALGRYKEESRESDRQTATKLGVNQMTMTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0209040_102966262	3300027824	Bog Forest Soil	QTPAMSTEEVLQALTRYTKETNDSERQTATKLGINCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYL
Ga0209039_100493881	3300027825	Bog Forest Soil	MRTTPMTTDEVLQALGRYSKESKQSDRMTATQLGISRMTLSDWLGGKDQPQKCVLARLAGFLRRVGYL
Ga0209039_100634081	3300027825	Bog Forest Soil	EEVLQALGRYTEESRESDRQTATKLGVNRMTLTAWLGGRDRPQRFKLARLAGFLRRVGYL
Ga0209039_103419161	3300027825	Bog Forest Soil	MTTEEVLKALGRYKEQSRESDRQTATKLGVNRMTMTAWLGGRDRPQRYMLARLAGFLRRVGYL
Ga0209773_101210522	3300027829	Bog Forest Soil	MTTEEVLKALGRYKEESRESDRQTATKLGVNRMTMTAWLGGRERPQRCMLARLAGFLRRVGYL
Ga0209275_104668071	3300027884	Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPEKCTLARLAGFLRRVGYL
Ga0209275_104928151	3300027884	Soil	MTTEEVLEALGRYTEESRESDRQTATKLGVKRMTLTAWLGGKDRPQRCMLARLAGFLRRVGY
Ga0209698_101182001	3300027911	Watersheds	MSTEEVLQALTRYTKETNDSERQTATKLGINCMTLSTWLHGKEPPQKCTLARLAGFLRRVGYL
Ga0318541_107666751	3300031545	Soil	MTTEEVLKALGRYTKESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0318538_103279562	3300031546	Soil	MTTEEVLQALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFL
Ga0310915_102343502	3300031573	Soil	MTTEEVLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLKRVGYL
Ga0310915_112101042	3300031573	Soil	MTTEDVLRALGRYKEESHESERQTATKLGVNRTTLTAWLGGRDRPQRFMLARLAGFLRRVGYL
Ga0306917_101175432	3300031719	Soil	MTTEEVLQALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306918_103378231	3300031744	Soil	VALSSARMTTEEVLQALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0307475_103435952	3300031754	Hardwood Forest Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCTLARLAGFLRR
Ga0318565_104142371	3300031799	Soil	MTTEEVLKALGRYTKESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGY
Ga0307473_104063951	3300031820	Hardwood Forest Soil	PSARMTTEEVLKALGRYTEESCESGRQTATKLDVNRVMLNAWLGGGRDRPQRCMLARLAGFLRRVGYL
Ga0306919_101157012	3300031879	Soil	MTTEEVLRALGRYKEESHESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306919_102242991	3300031879	Soil	VLRALGRYKEESHESERQTATKLGVNRTTLTAWLGGRDRPQRFMLARLAGFLRRVGYL
Ga0306919_108117351	3300031879	Soil	MTTEEVLEALGRYAEESRESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306919_111616181	3300031879	Soil	SSTRMTTEEVLKALGRYTKESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306925_101042832	3300031890	Soil	MTTEDVLEALGRYKEESRESERQTATKLGVNRTTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306925_119355512	3300031890	Soil	RVALSSARMTTEEVLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306923_114602061	3300031910	Soil	SRVALPSARMTTEEVLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLKRVGYL
Ga0306923_120120261	3300031910	Soil	MTTEEVLKALGRYTQESRETDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAG
Ga0306921_124083102	3300031912	Soil	DVLRALGRYKEESRESECQTATKLGVNRTTLTAWLGGRDRPQRFMLARLAGFLRRVGYL
Ga0310910_105958232	3300031946	Soil	ARMTTEDVLRALGRYTEESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0310910_108602251	3300031946	Soil	EEVLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLKRVGYL
Ga0310910_113262941	3300031946	Soil	WPFVTGGITLRAYEPDEVLKALGQYTEESCESDRQTATKLGVNRMMLNAWLGGRDRPQRCMLARLACLLRRVGYL
Ga0310909_100939441	3300031947	Soil	YMEESCESDRQTATKLGVNRMMLNAWLGGRDRSQRCYAGEVSGLFETRWLSVGWR
Ga0310909_103131482	3300031947	Soil	RVALPSARMTTEEVLRALGRYKEESHESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306926_100506183	3300031954	Soil	MTTEDVLRALGRYTEESSESERQTATKLGVKRMTLTAWLGGKGRPQRFMLARLAGFLRRVGYL
Ga0306926_101359183	3300031954	Soil	MTTEDVLRALGRYKEESHESERQTATKLGVNRTTLTAWLGGRDRPQRFMLARLAGFLRR
Ga0306922_115559631	3300032001	Soil	PSARMTTEEVLRALGRYKEESHESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0318533_109052142	3300032059	Soil	TKDVLYALGRYKIESDESDRQTATKLGVNCLTLKAWLRGVDPPQRCLVARLAGFLRRVGY
Ga0318533_109318271	3300032059	Soil	PSARMTTEDVLRALGRYTEESSESERQTATKLGVKRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0311301_117896091	3300032160	Peatlands Soil	MSTEEVLQALTRYTKETNDSERQTATKLGVNCMTLSTWLHGKEPPQKCKLARLAG
Ga0306920_1001658991	3300032261	Soil	TEEVLRALGRYKEESHESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGY
Ga0306920_1002329432	3300032261	Soil	MTTEEVLKALGRYTQESRETDRQTATKLGVNRMTLTAWLGGRDRPQRCMLARLAGFLRRVGYL
Ga0306920_1008570522	3300032261	Soil	MTTEDVLRALGRYTEEASESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306920_1016913042	3300032261	Soil	MTTEEVLEALGRYTEESRDSERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL
Ga0306920_1030959711	3300032261	Soil	VALSSARMTTEEVLRALGRYTEESSESERQTATKLGVNRMTLTAWLGGKDRPQRFMLARLAGFLRRVGYL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040241

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences