Metagenome / Metatranscriptome Family F040233

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040233
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	73 residues
Representative Sequence	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Number of Associated Samples	130
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.01 %
% of genes near scaffold ends (potentially truncated)	24.07 %
% of genes from short scaffolds (< 2000 bps)	90.74 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.753 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.197 % of family members)
Environment Ontology (ENVO)	Unclassified (20.988 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.975 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.65% β-sheet: 30.39% Coil/Unstructured: 51.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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SCOP family	SCOP domain	Representative PDB	TM-score
d.355.1.1: RplX-like	d2jxta1	2jxt	0.65
d.355.1.1: RplX-like	d2jxta1	2jxt	0.65
d.375.1.1: NE1680-like	d2hfqa1	2hfq	0.63
d.375.1.1: NE1680-like	d2hfqa1	2hfq	0.63
c.55.3.0: Ribonuclease H-like	d2ehga_	2ehg	0.59
c.55.3.0: Ribonuclease H-like	d2ehga_	2ehg	0.59
d.252.1.1: CheC-like	d1xkra_	1xkr	0.56
d.252.1.1: CheC-like	d1xkra_	1xkr	0.56
d.252.1.1: CheC-like	d1squa_	1squ	0.55
d.252.1.1: CheC-like	d1squa_	1squ	0.55

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF02668	TauD	16.67
PF03328	HpcH_HpaI	12.96
PF04392	ABC_sub_bind	1.85
PF00106	adh_short	1.23
PF00903	Glyoxalase	1.23
PF13460	NAD_binding_10	1.23
PF01797	Y1_Tnp	1.23
PF03061	4HBT	1.23
PF09339	HTH_IclR	0.62
PF10041	DUF2277	0.62
PF07883	Cupin_2	0.62
PF00881	Nitroreductase	0.62
PF14026	DUF4242	0.62
PF08501	Shikimate_dh_N	0.62
PF07690	MFS_1	0.62
PF13442	Cytochrome_CBB3	0.62
PF00083	Sugar_tr	0.62
PF01370	Epimerase	0.62
PF09587	PGA_cap	0.62
PF01039	Carboxyl_trans	0.62
PF13335	Mg_chelatase_C	0.62
PF12760	Zn_Tnp_IS1595	0.62
PF00413	Peptidase_M10	0.62
PF12681	Glyoxalase_2	0.62
PF01367	5_3_exonuc	0.62
PF13517	FG-GAP_3	0.62
PF13006	Nterm_IS4	0.62
PF05199	GMC_oxred_C	0.62
PF00557	Peptidase_M24	0.62
PF13701	DDE_Tnp_1_4	0.62
PF00596	Aldolase_II	0.62
PF13586	DDE_Tnp_1_2	0.62
PF13561	adh_short_C2	0.62
PF13362	Toprim_3	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	16.67
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	12.96
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	12.96
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	12.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.85
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.23
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.62
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.62
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.62
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.62
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.62
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.62
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.75 %
Unclassified	root	N/A	30.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.75 %
Unclassified	root	N/A	30.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.75 %
Unclassified	root	N/A	30.25 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.72 %
Unclassified	root	N/A	30.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.62 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.47 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.23 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.23 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.62 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.25 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.47 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	2.47 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.47 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.47 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.62 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.62 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	2.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.47 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.62 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.62 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.62 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.62 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.62 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.62 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.62 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.62 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.62 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.62 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	2.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.47 %
Hoeflea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea	0.62 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.62 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.62 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.62 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.62 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.62 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.62 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	2.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.47 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.62 %
Paracoccus mutanolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus mutanolyticus	0.62 %
unclassified Hoeflea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea	0.62 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.62 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.62 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	0.62 %
Methylocaldum szegediense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → Methylocaldum szegediense	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.62 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	2.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.47 %
Hyphomicrobium denitrificans 1NES1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans → Hyphomicrobium denitrificans 1NES1	0.62 %
Algoriphagus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus	0.62 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.62 %
Hoeflea sp. EC-HK425	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea → Hoeflea sp. EC-HK425	0.62 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.62 %
Paracoccus mutanolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus mutanolyticus	0.62 %
Methylocaldum szegediense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → Methylocaldum szegediense	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.62 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	2.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.47 %
Algoriphagus antarcticus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus antarcticus	0.62 %
Hyphomicrobium denitrificans 1NES1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans → Hyphomicrobium denitrificans 1NES1	0.62 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.62 %
Hoeflea sp. EC-HK425	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea → Hoeflea sp. EC-HK425	0.62 %
Nocardiopsis synnemataformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	0.62 %
Paracoccus mutanolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus mutanolyticus	0.62 %
Methylocaldum szegediense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → Methylocaldum szegediense	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.62 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01C51CU	Not Available	518	Open in IMG/M
3300000550\|F24TB_16752648	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300002568\|C688J35102_120506546	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300004092\|Ga0062389_103631832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis synnemataformans	579	Open in IMG/M
3300004114\|Ga0062593_101451084	Not Available	736	Open in IMG/M
3300004152\|Ga0062386_100446578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1046	Open in IMG/M
3300004152\|Ga0062386_101416149	Not Available	579	Open in IMG/M
3300004152\|Ga0062386_101549084	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005329\|Ga0070683_100573077	All Organisms → cellular organisms → Bacteria → Proteobacteria	1080	Open in IMG/M
3300005329\|Ga0070683_100749755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300005330\|Ga0070690_100854052	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300005331\|Ga0070670_101652833	Not Available	589	Open in IMG/M
3300005334\|Ga0068869_101081251	Not Available	701	Open in IMG/M
3300005340\|Ga0070689_100617767	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005347\|Ga0070668_101791773	Not Available	564	Open in IMG/M
3300005353\|Ga0070669_101855279	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005354\|Ga0070675_100928289	Not Available	798	Open in IMG/M
3300005434\|Ga0070709_10184434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1468	Open in IMG/M
3300005435\|Ga0070714_100903270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	858	Open in IMG/M
3300005435\|Ga0070714_102085294	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005436\|Ga0070713_100060711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3161	Open in IMG/M
3300005436\|Ga0070713_100821439	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300005436\|Ga0070713_101498053	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005436\|Ga0070713_101839239	Not Available	588	Open in IMG/M
3300005457\|Ga0070662_101242855	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005458\|Ga0070681_10440700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1215	Open in IMG/M
3300005524\|Ga0070737_10000099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	209487	Open in IMG/M
3300005529\|Ga0070741_11117328	Not Available	669	Open in IMG/M
3300005538\|Ga0070731_10000997	All Organisms → cellular organisms → Bacteria → Proteobacteria	31689	Open in IMG/M
3300005541\|Ga0070733_10058756	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300005542\|Ga0070732_10914576	Not Available	536	Open in IMG/M
3300005544\|Ga0070686_100909371	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005618\|Ga0068864_102347330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus mutanolyticus	540	Open in IMG/M
3300005764\|Ga0066903_102847278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300006175\|Ga0070712_100339888	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300006176\|Ga0070765_101776137	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300006806\|Ga0079220_10213831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1124	Open in IMG/M
3300006854\|Ga0075425_102202890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	614	Open in IMG/M
3300006871\|Ga0075434_100299093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1630	Open in IMG/M
3300006954\|Ga0079219_10681961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans → Hyphomicrobium denitrificans 1NES1	776	Open in IMG/M
3300006954\|Ga0079219_12135681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300009094\|Ga0111539_12450859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300009156\|Ga0111538_10865894	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300009156\|Ga0111538_12378794	Not Available	665	Open in IMG/M
3300009553\|Ga0105249_11755242	Not Available	693	Open in IMG/M
3300009840\|Ga0126313_11673757	Not Available	531	Open in IMG/M
3300010039\|Ga0126309_10633037	Not Available	678	Open in IMG/M
3300010045\|Ga0126311_10612623	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300010046\|Ga0126384_11930774	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010048\|Ga0126373_11200133	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300010359\|Ga0126376_10494811	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300010360\|Ga0126372_11542970	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300010371\|Ga0134125_10799867	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300010376\|Ga0126381_102750479	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300010379\|Ga0136449_101518567	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300010398\|Ga0126383_13573626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	508	Open in IMG/M
3300010937\|Ga0137776_1498015	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300011270\|Ga0137391_10685182	Not Available	853	Open in IMG/M
3300011332\|Ga0126317_10011323	Not Available	507	Open in IMG/M
3300012212\|Ga0150985_101882375	Not Available	568	Open in IMG/M
3300012212\|Ga0150985_102274683	Not Available	558	Open in IMG/M
3300012212\|Ga0150985_102814779	Not Available	542	Open in IMG/M
3300012212\|Ga0150985_104328451	Not Available	727	Open in IMG/M
3300012212\|Ga0150985_109177385	Not Available	540	Open in IMG/M
3300012212\|Ga0150985_109830054	Not Available	597	Open in IMG/M
3300012212\|Ga0150985_114341011	Not Available	554	Open in IMG/M
3300012212\|Ga0150985_118132565	Not Available	812	Open in IMG/M
3300012469\|Ga0150984_101133930	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012469\|Ga0150984_105305411	Not Available	1068	Open in IMG/M
3300012469\|Ga0150984_117878371	Not Available	539	Open in IMG/M
3300012469\|Ga0150984_119371869	Not Available	524	Open in IMG/M
3300012987\|Ga0164307_10758446	Not Available	767	Open in IMG/M
3300012989\|Ga0164305_11804491	Not Available	552	Open in IMG/M
3300013297\|Ga0157378_13198500	Not Available	509	Open in IMG/M
3300014325\|Ga0163163_11126005	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300015052\|Ga0137411_1040579	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300015200\|Ga0173480_11202661	Not Available	512	Open in IMG/M
3300015371\|Ga0132258_12021007	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Algoriphagus → Algoriphagus antarcticus	1450	Open in IMG/M
3300015372\|Ga0132256_101127487	Not Available	899	Open in IMG/M
3300015372\|Ga0132256_102051731	Not Available	678	Open in IMG/M
3300015374\|Ga0132255_103812746	Not Available	641	Open in IMG/M
3300015374\|Ga0132255_105278901	Not Available	547	Open in IMG/M
3300016294\|Ga0182041_10866911	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300016341\|Ga0182035_11305213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300016404\|Ga0182037_10271622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300017937\|Ga0187809_10287050	Not Available	603	Open in IMG/M
3300017966\|Ga0187776_10648337	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300017970\|Ga0187783_11293166	Not Available	525	Open in IMG/M
3300017972\|Ga0187781_10104320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1970	Open in IMG/M
3300017972\|Ga0187781_10698144	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300018042\|Ga0187871_10026002	All Organisms → cellular organisms → Bacteria → Proteobacteria	3712	Open in IMG/M
3300018058\|Ga0187766_10796673	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300018060\|Ga0187765_10162366	All Organisms → cellular organisms → Bacteria → Proteobacteria	1268	Open in IMG/M
3300018088\|Ga0187771_10118107	All Organisms → cellular organisms → Bacteria → Proteobacteria	2154	Open in IMG/M
3300018431\|Ga0066655_10370650	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300018468\|Ga0066662_10195375	Not Available	1593	Open in IMG/M
3300019260\|Ga0181506_1202355	Not Available	531	Open in IMG/M
3300020080\|Ga0206350_10277130	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300020581\|Ga0210399_10189055	All Organisms → cellular organisms → Bacteria → Proteobacteria	1711	Open in IMG/M
3300020583\|Ga0210401_10052863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3834	Open in IMG/M
3300020583\|Ga0210401_11528282	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300021181\|Ga0210388_11601156	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300021362\|Ga0213882_10167177	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300021377\|Ga0213874_10147019	Not Available	820	Open in IMG/M
3300021377\|Ga0213874_10346837	Not Available	568	Open in IMG/M
3300021384\|Ga0213876_10146024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258	Open in IMG/M
3300021401\|Ga0210393_10142056	All Organisms → cellular organisms → Bacteria → Proteobacteria	1927	Open in IMG/M
3300021403\|Ga0210397_10123090	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300021407\|Ga0210383_10583793	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300021560\|Ga0126371_10157900	All Organisms → cellular organisms → Bacteria → Proteobacteria	2335	Open in IMG/M
3300021560\|Ga0126371_10793388	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300021560\|Ga0126371_13048436	Not Available	567	Open in IMG/M
3300022508\|Ga0222728_1051805	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300022527\|Ga0242664_1021578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	1017	Open in IMG/M
3300022533\|Ga0242662_10187173	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300025915\|Ga0207693_10157474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1787	Open in IMG/M
3300025926\|Ga0207659_11385656	Not Available	603	Open in IMG/M
3300025928\|Ga0207700_10552931	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300025929\|Ga0207664_10418593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1193	Open in IMG/M
3300025930\|Ga0207701_10248377	Not Available	1554	Open in IMG/M
3300025931\|Ga0207644_11267866	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300025939\|Ga0207665_10569877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300025944\|Ga0207661_10342360	All Organisms → cellular organisms → Bacteria → Proteobacteria	1348	Open in IMG/M
3300026121\|Ga0207683_11200776	Not Available	703	Open in IMG/M
3300027576\|Ga0209003_1001546	All Organisms → cellular organisms → Bacteria → Proteobacteria	2607	Open in IMG/M
3300027706\|Ga0209581_1000066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	365755	Open in IMG/M
3300027867\|Ga0209167_10150714	Not Available	1220	Open in IMG/M
3300027884\|Ga0209275_10342874	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300030730\|Ga0307482_1226557	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031231\|Ga0170824_113454626	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300031474\|Ga0170818_100046363	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031543\|Ga0318516_10060810	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300031543\|Ga0318516_10338180	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300031545\|Ga0318541_10015228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3566	Open in IMG/M
3300031545\|Ga0318541_10833487	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031564\|Ga0318573_10092369	All Organisms → cellular organisms → Bacteria → Proteobacteria	1543	Open in IMG/M
3300031573\|Ga0310915_10574090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300031708\|Ga0310686_110840853	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031713\|Ga0318496_10653774	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300031719\|Ga0306917_10412085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → Methylocaldum szegediense	1056	Open in IMG/M
3300031723\|Ga0318493_10539429	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031740\|Ga0307468_100931627	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300031754\|Ga0307475_10827919	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031779\|Ga0318566_10162184	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300031781\|Ga0318547_10624985	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300031805\|Ga0318497_10094008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1602	Open in IMG/M
3300031890\|Ga0306925_10390284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1493	Open in IMG/M
3300031890\|Ga0306925_11000212	Not Available	853	Open in IMG/M
3300031896\|Ga0318551_10348358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	838	Open in IMG/M
3300031954\|Ga0306926_13020781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	502	Open in IMG/M
3300031962\|Ga0307479_10548625	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
3300031962\|Ga0307479_12017087	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300032044\|Ga0318558_10532744	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300032160\|Ga0311301_11453218	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300032892\|Ga0335081_11056676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Hoeflea → unclassified Hoeflea → Hoeflea sp. EC-HK425	940	Open in IMG/M
3300032895\|Ga0335074_10013400	All Organisms → cellular organisms → Bacteria	11523	Open in IMG/M
3300032896\|Ga0335075_10009013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15257	Open in IMG/M
3300032896\|Ga0335075_10045828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6132	Open in IMG/M
3300032896\|Ga0335075_10896271	Not Available	813	Open in IMG/M
3300032955\|Ga0335076_10358646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1344	Open in IMG/M
3300033134\|Ga0335073_11921425	Not Available	546	Open in IMG/M
3300033158\|Ga0335077_11156614	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.54%
Host-Associated	Host-Associated	23.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.99%
Plants	Host-Associated → Plants	23.46%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.64%
Freshwater	Environmental → Aquatic → Freshwater	4.94%
Roots	Host-Associated → Plants → Roots	2.47%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.62%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.68%
Loam	Environmental → Terrestrial → Soil → Loam	15.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.32%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.23%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.62%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.62%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.47%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.23%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.62%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.09%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.47%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.47%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.23%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.23%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.62%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.62%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.62%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_02868240	2170459005	Grass Soil	LVTGPDAAIGENLRRRIVAVGTDDSDEAFAVARATVPGGFPTSIGLLADDAVADLGLRSGEARVLGAF
F24TB_167526481	3300000550	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARETVPGGVPTSVGPLTEDSVADLGLKPGKGR
C688J35102_1205065461	3300002568	Soil	MKGWIMLVTGPDTEIGQNLRRRIVAAAVDDSDEAFAVARDTVPGGTPTSVGPLTDDTVADLGLKSGKGRVLGTF*
Ga0062389_1036318321	3300004092	Bog Forest Soil	MKGWVMLVTGPDAAIGENLRRRIVAVGTDDSDEAFAAARATVPGGFPTSVGLLADDAVADLGLRSGEARVLGAF*
Ga0062593_1014510842	3300004114	Soil	MKGWMMLVTGPDTEIGENLRRRIVAAAASDSDEAFAVARDTVPGGTPTSVGPLTDDTVADLGLKSGKGRVLGTF*
Ga0062386_1004465782	3300004152	Bog Forest Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAIARDTVPGGMPTSVGPLTEDSVADLGLKPGKSRVLGTF*
Ga0062386_1014161491	3300004152	Bog Forest Soil	MKGWLMLVTGPDAEIGQNLRRRIVAAAVDDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKPGKSRVLGTF*
Ga0062386_1015490841	3300004152	Bog Forest Soil	MKGWMMLVTGPDAESGQNLRRRIVAAAVNDSDEAFAVARDAVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF*
Ga0070683_1005730772	3300005329	Corn Rhizosphere	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARATAPGGTPTSVGPLADDAVAALGLEPGKARVLGDF*
Ga0070683_1007497552	3300005329	Corn Rhizosphere	MLVTGPDTEIGQNLRRRMVAAAIDDSDEAFAVARNTVPGGTPTSVGPLTDDTVADLGLKPGKGRVLGISEMQAG*
Ga0070690_1008540523	3300005330	Switchgrass Rhizosphere	MKGWMMLVAGPDTEIGQNLRRRIVVAAVDDSDEAFAVARDTVPGGTPTSVGPLTDDTVADLGLKSGKGRVLGTF*
Ga0070670_1016528331	3300005331	Switchgrass Rhizosphere	MKGWIMLVTGPDTEIGQNLRRRMVAAAIDDSDEAFAVARNTVPGGTPTSVGPLTDDTVADLGLKPGKGRVLGISEMQAG*
Ga0068869_1010812511	3300005334	Miscanthus Rhizosphere	MKGWIMLVTGPDTEIGQNLRRRIVVAAVDDSDEAFAVARDTVPGGTPTSVGPLTDDTVADLGLKSGKGRVLGTF*
Ga0070689_1006177672	3300005340	Switchgrass Rhizosphere	MKGWMILMTGPETTTGENLRRRIVATGTHDSDEAFAIARATVPGGTPTSVGPLADDAVAALGLEPGKTRVLGDF*
Ga0070668_1017917731	3300005347	Switchgrass Rhizosphere	MKGWMMLVTGPDTEIGENLRRRIVAAAVSDSDEAFAVARDTVPGGTPTSVGPLTDDTVADLGLKSGKGRVLGTF*
Ga0070669_1018552792	3300005353	Switchgrass Rhizosphere	MKGWIMLVTGPDAAIGENLRRRIVAVGTCDSDEAFALARATVPGGLPTSVGLLADDAVAALGLEPGKCRVLG
Ga0070675_1009282892	3300005354	Miscanthus Rhizosphere	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARDSVPGGAPTSVGPLADDAVAALGLEPGKARVLGDF*
Ga0070709_101844343	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GPDAEIGQNLRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDGVTDLGLKPGKGRVLGTF*
Ga0070714_1009032702	3300005435	Agricultural Soil	MQGWMMLVTGPDAEIGQNLRRRIVATAVTDSDEAFAVARETVPGAIPRSVGPLTEDSVVDLGLKPGKGRVIGIS*
Ga0070714_1020852942	3300005435	Agricultural Soil	MKGWIVLMTGPDAQSGQNARRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDRVADLGLKPGKGRVLGTF*
Ga0070713_1000607113	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTGADAEIGQNLRRRIVAAAVNDSDEAFAVGRETVPGGVPVSVGPLSDDSVADLGLKPGKGRVLGTF*
Ga0070713_1008214392	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKGWIVLMTGPDAEIGQNLRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDGVTDLGLKPGKGRVLGTF*
Ga0070713_1014980531	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQGWMMLVTGPDAEIGQNLRRRIVATAVTDSDEAFAVARDTVPGGIPTSVGPLTEDSVADLGLKSGKGRVLGTF*
Ga0070713_1018392392	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKGWIVLMTGPDAEIGQNLRRRIVAAAVNDSDEAFAVGREAVPGGVPTSVGPLSDDSIADLGLKPGKGRVLGTF*
Ga0070662_1012428552	3300005457	Corn Rhizosphere	MKGWIMLVTGPDTETGQNLRRRIIAVAADDSDEAFAVARDTVPGGTLTSVGPLTDDSVADLGLKPGKGRVLGTF*
Ga0070681_104407002	3300005458	Corn Rhizosphere	MKGWMMLVTGPDAGIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGLPTSVGPLAEDSVADLGLKPGKGRVLGTF*
Ga0070737_100000993	3300005524	Surface Soil	VKGWIILVTGPDLGIGENLRRRIVAAAVEDSDEAFAAARTAVPGGMPTSVGPLTEESVADLRLTPGKSRVLGTF*
Ga0070741_111173282	3300005529	Surface Soil	MNGWMMLMTGPDAAAGQNLRRRLVAVAAENSDEAFAAARAAVPGGFPTSVGPLTADSVADLGLSPGKSRVLGTF*
Ga0070731_100009974	3300005538	Surface Soil	MKGWVILVTGPDASIGDNRRRRIVAVATDDSDVAFAVARATVPGGLPTSVGPLRDDVVDDLGLKPGGGRVIGDF*
Ga0070733_100587563	3300005541	Surface Soil	MTGWVMLVTGPDAAIGENLRRRIVAVGTDDSDEAFAVARATVPGGFPTSVGLLADDAVADLGLRSGEARVLGAF*
Ga0070732_109145762	3300005542	Surface Soil	MKGWVMLVTGPDAAIGENLRRRIVAVGTDDSDEAFSVARATVPGGFPTSVGLLADDAVADLGLRSGEARVLGAF*
Ga0070686_1009093711	3300005544	Switchgrass Rhizosphere	GENLRRRIVATGTHDSDEAFAIARATVPGGTPTSVGPLADDAVAALGLEPGKTRVLGDF*
Ga0068864_1023473302	3300005618	Switchgrass Rhizosphere	WVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARATVPGGTPTSVGPLADDAVAALGLEPGKARVLGDF*
Ga0066903_1028472783	3300005764	Tropical Forest Soil	MKGWMMLVTGPDVEIGQNLRRRIVAAAVTDSDEAFAVARDTVPGGAPTSVGPLTEDSVADLGLKSGKGRVLGTF*
Ga0070712_1003398881	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGIPTSVGPLTEDSVADLGLKSGKGRVLGTF*
Ga0070765_1017761371	3300006176	Soil	MKGWMMLVTGPDAIGENPRRRIVAVAVKDSDEAFAAARETVPGGLPTSVGPMTDDCVADLGLTPGKGRVMGTF*
Ga0079220_102138311	3300006806	Agricultural Soil	MKGWIVLMTGPDMEDGQNVRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLTEDAAADLGLTPGKGRVLGTF*
Ga0075425_1022028901	3300006854	Populus Rhizosphere	MMLVTGPDMEIGQNLRRRIVAAVVTDSDEAFAVARETVPGGVPTSVGPLTDDSVADLGLKPGKPRVLGTF*
Ga0075434_1002990932	3300006871	Populus Rhizosphere	MKGWIVLMTGRDAEIGQNLRRRIVAAAVNDSDEAFAVGREAVPGGVPTSVGPLSDDSIADLGLKPGKGRVLGTF*
Ga0079219_106819611	3300006954	Agricultural Soil	MKGWIMLVTGPDTETGQNLRRRIIAVAVADSDEAFAVARETVPGGTPTSVGPLMDDSVADLGLKAGKGRVLGTF*
Ga0079219_121356811	3300006954	Agricultural Soil	QSGQNARRRIVAAAVNDSDEAFAVGRETVPGGLPVSVGPLSDDSVADLGLKPGKGRVLGTF*
Ga0111539_124508592	3300009094	Populus Rhizosphere	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARAAVPGGIPTSVGPLTDDTVADLGLEPGKARVLGDF*
Ga0111538_108658942	3300009156	Populus Rhizosphere	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARATVPGGLPTSVGPLTDDAVADLGLEPGKARVLGDF*
Ga0111538_123787941	3300009156	Populus Rhizosphere	MKGWAILVTGPETTMGENLRRRLVAIATGDSDEAFAIARETVPGGLPTSVGPLADDAVADLGLKPGKGRIIGDF*
Ga0105249_117552421	3300009553	Switchgrass Rhizosphere	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARDSVPGGAPTSVGPLADDAAALGLEPGKARVLGDF*
Ga0126313_116737571	3300009840	Serpentine Soil	MKGWMMLVTGPDMEIGQNLRRRIVVAAVNDSDEAFAVARDTVPGGRPTSVGPLTDDTVADLGLKPGKGRVLGTF*
Ga0126309_106330372	3300010039	Serpentine Soil	MMLVTGPDTEIGQNLRRRIVAAAVDDSDEAFAVARDTVPGGTPISVGPLTDDSVADLGLKPGTGRVLGTF*
Ga0126311_106126231	3300010045	Serpentine Soil	MKGWLMLVTGPDTEIGQHMRRRIVAAAVNDSDEAFAVARDTVSGGTPTSVGPLTDDSVADLGLKPGKGRVLGTF*
Ga0126384_119307742	3300010046	Tropical Forest Soil	MKGWIVLMTGPDAGIGQNVRRRIVAAAVNDSDEAFAIGRETVPGGVPTSVGPLSEDSVADLGLKPGKGRVLGTF*
Ga0126373_112001332	3300010048	Tropical Forest Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF*
Ga0126376_104948112	3300010359	Tropical Forest Soil	MTGPDTEIGENQRRRIVAAAVNDSDEAFAIGRETVPGGVPTSVGPLTEDAVADLGLKPGKGRVLGTF*
Ga0126372_115429702	3300010360	Tropical Forest Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAIARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF*
Ga0134125_107998671	3300010371	Terrestrial Soil	QIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGIPTSVGPLTEDSVADLGLKPGKGRVLGTF*
Ga0126381_1027504792	3300010376	Tropical Forest Soil	MKGWIVLMTGPDAEIGQNVRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDSVADLGLKPGKGRVLGTF*
Ga0136449_1015185672	3300010379	Peatlands Soil	MKGWMMLVTGPDVEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKLGKGRVLGTF*
Ga0126383_135736261	3300010398	Tropical Forest Soil	MKGWIVLMTGPDSEIGQNVRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDSVADLGLKPGKGRVLGTF*
Ga0137776_14980151	3300010937	Sediment	MKGWIMLVTGPDVEIGQNLRRRIVAALVNDSDEAYAVARDTVPGGVPTSVGPLSEDSVADLGLTPRKGRVLGTF*
Ga0137391_106851822	3300011270	Vadose Zone Soil	MKGWVMLVTGPDAAIGENLRRRIVAVGTDDSDEAFAVARATVPGGFPTSVGLLADDAVADLGLRSGEARVLGAF*
Ga0126317_100113231	3300011332	Soil	MKGWMMLVTGPDTEIGQNLRRRIVAAAVDDSDEAFAVARNTVPGGTPSSVGPLTDDSVADLGLKPGKGRVLGTF*
Ga0150985_1018823751	3300012212	Avena Fatua Rhizosphere	MKGWMMLVTGPDTEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGTPTSVGPLTDDSVADLGLKPGKGRVLGVF*
Ga0150985_1022746831	3300012212	Avena Fatua Rhizosphere	MKGWMLLITGPDGEIGQNLRRRIVAVAVNDSDEAFAIARDTVPGGTPTSVGPLTEDSVADLGLTPGKGRVLGIF*
Ga0150985_1028147791	3300012212	Avena Fatua Rhizosphere	GPDTEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGTPTSVGPLTDDSVADLGLKPGKGRVLGTF*
Ga0150985_1043284512	3300012212	Avena Fatua Rhizosphere	MKGWIMLVTGPDTEIGQNLRRRIVAAAVNDSDEAFAVARETVPGGTPTSVGPLTDDSVADLGLKPGKGRVLGTF*
Ga0150985_1091773852	3300012212	Avena Fatua Rhizosphere	DTMKGWIMLVTGPDTGIGQNLRRRIVAAAVDDSDEAFAVARDTVPGGTPTSVGPLTDDSVADLGLKSGKGRVLGMF*
Ga0150985_1098300541	3300012212	Avena Fatua Rhizosphere	TMKGWIMLVTGPDTEIGQNLRRRIVAAAVSDSDEAFAVARDTVPGGTPISVGPLTDDTVADLGLKPGKSRVLGTF*
Ga0150985_1143410111	3300012212	Avena Fatua Rhizosphere	MKGWMMLVTGPDTEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGAPTSIGPLTDDSVADLGLKPGKGRVLGTF*
Ga0150985_1181325651	3300012212	Avena Fatua Rhizosphere	MKGWMMLVTGPDAEIGQNLRRRIVAAAVDDSDEAFAVARDTVPGGTPTFVGPLTDDSVADLGLKPGKGRVLGTF*
Ga0150984_1011339302	3300012469	Avena Fatua Rhizosphere	GTMKGWMMLVTGPDTEIGQNLRRRIVAAAVNDSDEAFAIARDTVPGGTPTSIGPLTDDSVVDLGLMPGKGRVLGTF*
Ga0150984_1053054112	3300012469	Avena Fatua Rhizosphere	MKGWIMLVTGPDTEIGQNLRRRIVAAAVNDSDEAFAVACDTVPGGMPTSVGPLTDDTVAALGLKPGKGRVLGTF*
Ga0150984_1178783712	3300012469	Avena Fatua Rhizosphere	MKGWMMLVTGPDTGIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGTPTSVGPLADDSVADLGLKSGKGRVLGTF*
Ga0150984_1193718691	3300012469	Avena Fatua Rhizosphere	GRGTMKGWIMLVTGPDMEIGQNLRRRIVAAAVNDSDEAFAVSRETVPGGTPTSIGPLTDDSVADLGLMPGKGRVLGTF*
Ga0164307_107584462	3300012987	Soil	MKGWMMLVAGPDTEIGQNLRRRIVAAAVDDSDEAFAVARDTVPGGTPTSVGPLTDDTVADLGLKSGKGRVLGTF*
Ga0164305_118044911	3300012989	Soil	GWMMLVTGPDTEIGENLRRRIVAAAVSDSDEAFAVARDTVPGGTPTSVGPLTDDTVADLGLKSGKGRELGTF*
Ga0157378_131985001	3300013297	Miscanthus Rhizosphere	MGPETTTGENLRRRIVATGTGDSDEAFAIARATAPGGTPTSVGPLADDAVAALGLEPGKARVLGDF*
Ga0163163_111260053	3300014325	Switchgrass Rhizosphere	HERREAMKGWLILVTGPDTEIGENLRRRIVAVATVNSDEAFAVARAKVPGGMPTSVGLVADDVVTDLRLKAGEGRVLGAF*
Ga0137411_10405792	3300015052	Vadose Zone Soil	KREEPMKGWMMLVMGPDAEIGQNLRRRMVAVAVNDSDEAFAAARDTVPEVLPTSVGPLTEDSVADLGLKPGKGRVLGTF*
Ga0173480_112026612	3300015200	Soil	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARATAPGGTPTSVGPLADDAVAALGVEPGKARVLGDF*
Ga0132258_120210071	3300015371	Arabidopsis Rhizosphere	GWVILVTGPDAAIGENLRRRIIAVGTDDSDVAFAVARAMVPGGFPTSVGPLADNVVADLGLKPGEGRVIGDF*
Ga0132256_1011274872	3300015372	Arabidopsis Rhizosphere	LVTEPDAAIGENLRRRIIAVGTDDSDVAFAVARAMVPGGFATSVGPLADDVVADLGLKPGEGRVIGDF*
Ga0132256_1020517311	3300015372	Arabidopsis Rhizosphere	MKGWMILMTGPETTTGENLRRRIVATGTHDSDEAFAIARATVPGGTPTSVGPLADDAVAALGLEPGKGRVVGDF*
Ga0132255_1038127461	3300015374	Arabidopsis Rhizosphere	MKGWVMLVTGPDTAIGENPRRRIVAVPTGDSDEAFALARATVPGGMPTSVGLLADDAVAALGLEPGKCRVLGVF*
Ga0132255_1052789012	3300015374	Arabidopsis Rhizosphere	MILMTGPETTTGENLRRRIVATGTHDSDEAFAIARATVPGGTPTSVGPLADDAVAALGLEPGKGRVIGDF*
Ga0182041_108669111	3300016294	Soil	RDKVGVGGEEPMKGWMMLVTGPDAEIGQNLRRRIVAAAVTNSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0182035_113052132	3300016341	Soil	SEIGQNLRRRIVAAAVNEPDEAFAVARETVPGGVPTCVGLLTEESFADLGLKPGKGRVLGSF
Ga0182037_102716221	3300016404	Soil	EIGQNLRRRIVAAAVNDSGEAFAVAREMVPGVCPLTVDSVADLGLKPGKGRVLGTF
Ga0187809_102870501	3300017937	Freshwater Sediment	MKGWMMLVTGPDTEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGTPISVGPLTDDSVADLGLKPGKGRVLGTF
Ga0187776_106483372	3300017966	Tropical Peatland	MKGWMMLVTGPDSEIGQNLRRRIVAAVVKDSDEAFAIARDTVPGGVPASVGPLTEDSVADLGLKPGKGRVLGTF
Ga0187783_112931661	3300017970	Tropical Peatland	MRGWIVLVMGPDAEVGENLRRRIVAAAVADSDEAFAIARETVPGGVPTSVGPLAEDSVADLGLKPGKGRVLGAF
Ga0187781_101043203	3300017972	Tropical Peatland	MKGWVILVSGPDATSGENRRRRIVAVGTDDSDVAFAVARATVPGGFPTSVGPLADDAVADLGLKSREARVIGDF
Ga0187781_106981441	3300017972	Tropical Peatland	MKAWMILVTGPDATIGENRRRRIVAVGTDDSDVAFTVARAAVPGGFPTSIGLLADDAAADLRLKPGGARVIGDF
Ga0187871_100260022	3300018042	Peatland	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARETVPGGMPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0187766_107966731	3300018058	Tropical Peatland	FTLSILFVKKGGEPMKGWMMLVTGPDSEIGQNLRRRIVAAVVNDSDEAFAIARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0187765_101623662	3300018060	Tropical Peatland	MKGWMMLVTGPDSEIGQNLRRRIVAAVVNDSDEAFAIARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0187771_101181073	3300018088	Tropical Peatland	MKGWVILVTGPDAVIGENRRRRIVAVATDDSDVAFAVARATVPGGFPTSVGPLADDAVADLELKQGEGRVIGDF
Ga0066655_103706502	3300018431	Grasslands Soil	MRGWIVLMTGPDAEIGQNLRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDSVADLGLKPGKGRVLGTF
Ga0066662_101953752	3300018468	Grasslands Soil	MTGWAILVTGPDTAIGENRRRRIVAIATDDSDIAFAVARATVPGGLPTSVGPLADDAVVDLRLKPGEGRVIGDF
Ga0181506_12023551	3300019260	Peatland	MRGWVMLVTGPDWEIGQNLRRRIVAAAVNYSDEAFAVARGTVPGGTPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0206350_102771302	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MKGWIVLMTGPDMEDGQNVRRRIVAAAVNDSDEAFTVGRETVPGGVPTSVGPLAEDAVADLGLTPGKGRVLGTF
Ga0210399_101890552	3300020581	Soil	MKGWMMLVTGPDAESRQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0210401_100528634	3300020583	Soil	EIGQNVRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDSVADLGLKPGKGRVLGT
Ga0210401_115282822	3300020583	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0210388_116011561	3300021181	Soil	MKGWMMLVTGPDADSDQNQRRRIVAIATDDSDVAFAIARETVPGGLPTSVGLLAEDAVADLRLIPGKGRVLGTF
Ga0213882_101671771	3300021362	Exposed Rock	MKGWIVLMTGPDAEIGQNVRRRIVAAAVNDSDEAFAVGRETVPGGVLTSVGPLSEDSVADLGLKPGKGRVLGTF
Ga0213874_101470191	3300021377	Plant Roots	MTGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFTVARDTVPGGMPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0213874_103468371	3300021377	Plant Roots	MKGWMMLVTGPDTEIGQNLRRRIVVAAVNDSDEAFAVARDTVPGGTPTSVGPLTDDSVADLKLKPGKGRVLGTF
Ga0213876_101460241	3300021384	Plant Roots	MKGWIVLMTGPDAGIGQNVRRRIVAAAVNDSDEAFAVGRETVPGGVLTSVGPLSEDSVADLGLKPGKGRVLGTF
Ga0210393_101420563	3300021401	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARETVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0210397_101230903	3300021403	Soil	MKGWMMLVTGPDAVGENVRRRIVAVAVKDSDEAFAAARETVPGGLPTSVGPMTDDCVADLRLTPGKGRVLGTF
Ga0210383_105837932	3300021407	Soil	MKGRMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARETVPGGMPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0126371_101579003	3300021560	Tropical Forest Soil	MRGWIMLVTGPDEEIGQNLRRRIVGAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDAVADLGLKPGEGRVLGTF
Ga0126371_107933882	3300021560	Tropical Forest Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAIARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0126371_130484361	3300021560	Tropical Forest Soil	MKGWMMLVTGPDVEIGQNRRRRIVAAAVNDSDEAFAVARETVPGGILTSVGPLTEDSVADLGLKPGQGRVLGTF
Ga0222728_10518052	3300022508	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPTGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0242664_10215781	3300022527	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLK
Ga0242662_101871731	3300022533	Soil	MKGWIVLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0207693_101574741	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGIPTSVGPLTEDSVADLGLKSGKGRVLGTF
Ga0207659_113856562	3300025926	Miscanthus Rhizosphere	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARDSVPGGAPTSVGPLADDAVAALGLEPGKARVLGDF
Ga0207700_105529312	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKGWIVLMTGPDAEIGQNLRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDGVTDLGLKPGKGRVLGTF
Ga0207664_104185932	3300025929	Agricultural Soil	MKGWIVLMTGPDAEIGENLRRRIVPAAVNDSDEAFAVGREAVPGGVPTSVGPLSDDSIADLGLKPGKGRVLGTF
Ga0207701_102483772	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARATAPGGTPTSVGPLADDAVAALGLEPGKARVLGDF
Ga0207644_112678661	3300025931	Switchgrass Rhizosphere	MKGWMILMTGPETTTGENLRRRIVATGTHDSDEAFAIARATVPGGTPTSVGPLADDAVAALGLEPGKTRVLGDF
Ga0207665_105698772	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKGWIVLMTGPDAEIGQNLRRRIVAAAANDSDEAFAVGRETVAGGVPTSVGPLSEDSVADLGLKKGNDAWAVIKASDVMIGV
Ga0207661_103423602	3300025944	Corn Rhizosphere	MKGWIMLVTGPDTEIGQNLRRRMVAAAIDDSDEAFAVARNTVPGGTPTSVGPLTDDTVADLGLKPGKGRVLGISEMQAG
Ga0207683_112007762	3300026121	Miscanthus Rhizosphere	MRGWVILVTGPETTTGENLRRRIVATGTGDSDEAFAIARATVPGGTPTSVGPLADDAVAALGVEPGKARVLGDF
Ga0209003_10015463	3300027576	Forest Soil	MKGWVMLVTGPDAEIGQNLRRRIVAAVVNDSDEAYAVARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0209581_1000066193	3300027706	Surface Soil	VKGWIILVTGPDLGIGENLRRRIVAAAVEDSDEAFAAARTAVPGGMPTSVGPLTEESVADLRLTPGKSRVLGTF
Ga0209167_101507143	3300027867	Surface Soil	MTGWVMLVTGPDAAIGENLRRRIVAVGTDDSDEAFAVARATVPGGFPTSVGLLADDAVADLGLRSGEARVLGAF
Ga0209275_103428742	3300027884	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0307482_12265571	3300030730	Hardwood Forest Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVTDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0170824_1134546261	3300031231	Forest Soil	PMKGWMMLVTGPDAEIGQNLRRRIVAAAVTDSDEAFAVARDAVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0170818_1000463632	3300031474	Forest Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVTDSDEAFAVARDAVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0318516_100608104	3300031543	Soil	PMKGWMMLVTGPDAESGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGAF
Ga0318516_103381802	3300031543	Soil	MKGWVMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLAEDSVADLGLKPGKGRVLGAF
Ga0318541_100152283	3300031545	Soil	MKGWMMLVTGPDAESGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGAF
Ga0318541_108334872	3300031545	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVTNSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0318573_100923691	3300031564	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVTNSDEAFAVARDTVPGGVPTSVGPLTDDSVVDLGLKPGKGRVLGTF
Ga0310915_105740902	3300031573	Soil	MKGWMMLVTGPDSEIGQNLRRRIVAAAVNDSGEAFAVAREMVPGVCPLTVDSVADLGLKPGKGRVLGTF
Ga0310686_1108408532	3300031708	Soil	MKGWMMLVTGPDTQVGQNLRRRIVAAAANDSDEAFAIARDTVPGGVPTSVGPLTEDSVADLGLTPGKGRVVGTF
Ga0318496_106537742	3300031713	Soil	MKGWVMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLAEDSVADLGLKPGKGR
Ga0306917_104120852	3300031719	Soil	VTGPEAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLAEDSVADLGLKPGKGRVLGAF
Ga0318493_105394291	3300031723	Soil	EEPMKGWMMLVTGPDAEIGQNLRRRIVAAAVTNSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0307468_1009316271	3300031740	Hardwood Forest Soil	SLIKGGKLMKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARETVPGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0307475_108279192	3300031754	Hardwood Forest Soil	MKGWIVLMTGPDAEIGQNVRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSENSVADLGLKPGKGRVLGTF
Ga0318566_101621842	3300031779	Soil	MKGWVMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0318547_106249851	3300031781	Soil	DAEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLAEDSVADLGLKPGKGRVLGAF
Ga0318497_100940081	3300031805	Soil	MLVTGPDAESGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTDDSVADLGLKPGKGRVLGTF
Ga0306925_103902842	3300031890	Soil	PQANRANRDQVSEGGEEPMKGWMMLVTGPDSEIGQNLRRRIVAAAVNDSGEAFAVAREMVPGVCPLTVDSVADLGLKPGKGRVLGTF
Ga0306925_110002122	3300031890	Soil	MKGWVMLVAGPDAATGENLRRRIVAAAVDDSDEAFAVARTTVPGGTPTSVGPLADDAVADLGLKPREGRVLGDF
Ga0318551_103483581	3300031896	Soil	MKGWMMLVTGPDAESGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKPG
Ga0306926_130207811	3300031954	Soil	VAGPDAATGENLRRRIVAAAVDDSDEAFAVARTTVPGGTPTSVGPLADDAVADLGLKPREGRVLGDF
Ga0307479_105486252	3300031962	Hardwood Forest Soil	MKGWIVLMTGPDAEIGQNVRRRIVAAAVNDSDEAFAVGRETVPGGVPTSVGPLSEDSVADLGLKPGKGRVLGTF
Ga0307479_120170872	3300031962	Hardwood Forest Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVNDSDEAFAVARETVHGGVPTSVGPLTEDSVADLGLKPGKGRVLGTF
Ga0318558_105327441	3300032044	Soil	VTGPDMEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLAEDSVADLGLKPGKGRVLGAF
Ga0311301_114532182	3300032160	Peatlands Soil	MKGWMMLVTGPDVEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGVPTSVGPLTEDSVADLGLKLGKGRVLGTF
Ga0335081_110566762	3300032892	Soil	MKGWVILVTGPDAAIGENLRRRIVAIATGDSDEAFAVARATVPGGTPTSVGLLADDAVADLRLKPGEGRVLGDF
Ga0335074_100134003	3300032895	Soil	MKGWMMLVTGPDMEIGQNLRRRIVAAAVDDSDEAFAVARETVPGGTPTSVGPLTDDSVADLGLTPGRGRVLGAF
Ga0335075_1000901321	3300032896	Soil	MKGWVMLVTGPDTEIGQNLRRRIVAAAVNDSDEAFAVARDTVPGGTPTSVGPLTDDSVADLGLKPGKGRVLGSF
Ga0335075_100458287	3300032896	Soil	MRGWMMLVTGPDADSDQNLRRRIVAIATDDSDVAFTIARETVPGGLPTSVGPVTDDVVAALELKPGKGRVLGTF
Ga0335075_108962712	3300032896	Soil	MKGWMMLVTGPDMEIGQNLRRRIVAAAVDDSDEAFAVARETVPGGTPTSVGPLADDSVADLGLTPGRGRVLGAF
Ga0335076_103586463	3300032955	Soil	MKGWMMLVTGPDAEIGQNLRRRIVAAAVDDSDEAFAVARDTVPGGMPTSVGPLTEESVADLGLKPGKGRVLGAF
Ga0335073_119214252	3300033134	Soil	IGQNLRRRIVAAAVNDSDEAFAVARDTVPGGMPTSVGPLTEDSVADLGLKPRKGRVLGTF
Ga0335077_111566142	3300033158	Soil	MKGWMMLVTGPDTEVGQNLRRRIVAAAANDSDEAFAIARDTVPGGVPTSVGPLAEESVADLGLKSGKGRVVGTF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040233

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences