Metagenome Family F040227

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F040227
Family Type	Metagenome
Number of Sequences	162
Average Sequence Length	43 residues
Representative Sequence	IRLRARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD
Number of Associated Samples	100
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.77 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (82.099 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.802 % of family members)
Environment Ontology (ENVO)	Unclassified (58.642 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.321 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.71% β-sheet: 0.00% Coil/Unstructured: 44.29%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF04392	ABC_sub_bind	2.47
PF00805	Pentapeptide	1.23
PF05050	Methyltransf_21	1.23
PF01381	HTH_3	1.23
PF02518	HATPase_c	1.23
PF01527	HTH_Tnp_1	1.23
PF04545	Sigma70_r4	0.62
PF12697	Abhydrolase_6	0.62
PF11026	DUF2721	0.62
PF13358	DDE_3	0.62
PF00498	FHA	0.62
PF13560	HTH_31	0.62
PF01590	GAF	0.62
PF07110	EthD	0.62
PF02136	NTF2	0.62
PF04542	Sigma70_r2	0.62
PF03797	Autotransporter	0.62
PF13432	TPR_16	0.62
PF10046	BLOC1_2	0.62
PF00756	Esterase	0.62
PF03401	TctC	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.47
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.23
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.62
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.62
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.62
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.62
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.10 %
Unclassified	root	N/A	17.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.10 %
Unclassified	root	N/A	17.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.10 %
Unclassified	root	N/A	17.90 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	42.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.54 %
Unclassified	root	N/A	17.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	42.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.84 %
Unclassified	root	N/A	17.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	42.59 %
Unclassified	root	N/A	17.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.23 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	42.59 %
Unclassified	root	N/A	17.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.32 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.23 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.62 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.62 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	42.59 %
Unclassified	root	N/A	17.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.23 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	0.62 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.62 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.62 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	42.59 %
Unclassified	root	N/A	17.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.23 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.62 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.62 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.62 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.62 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.62 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	42.59 %
Unclassified	root	N/A	17.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.56 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.23 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.62 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.62 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.62 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.62 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.62 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10032393	All Organisms → cellular organisms → Bacteria → Proteobacteria	1407	Open in IMG/M
3300000956\|JGI10216J12902_102721999	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300000956\|JGI10216J12902_112622771	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	505	Open in IMG/M
3300001867\|JGI12627J18819_10492726	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	504	Open in IMG/M
3300004479\|Ga0062595_102376915	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	525	Open in IMG/M
3300005332\|Ga0066388_101842720	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1077	Open in IMG/M
3300005332\|Ga0066388_105695650	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	630	Open in IMG/M
3300005437\|Ga0070710_11300976	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	541	Open in IMG/M
3300005467\|Ga0070706_101604404	Not Available	593	Open in IMG/M
3300005468\|Ga0070707_100784442	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	916	Open in IMG/M
3300005471\|Ga0070698_101192582	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	710	Open in IMG/M
3300005713\|Ga0066905_100687224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300005713\|Ga0066905_101372845	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	638	Open in IMG/M
3300005764\|Ga0066903_100041131	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	5455	Open in IMG/M
3300005764\|Ga0066903_100260202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2691	Open in IMG/M
3300005764\|Ga0066903_101837988	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1158	Open in IMG/M
3300005764\|Ga0066903_103151079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300005764\|Ga0066903_104512548	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	742	Open in IMG/M
3300005764\|Ga0066903_105581355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	662	Open in IMG/M
3300005764\|Ga0066903_108233012	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	533	Open in IMG/M
3300005764\|Ga0066903_108257358	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	532	Open in IMG/M
3300005764\|Ga0066903_108660600	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	518	Open in IMG/M
3300006049\|Ga0075417_10651039	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	539	Open in IMG/M
3300006175\|Ga0070712_100760784	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	829	Open in IMG/M
3300006175\|Ga0070712_101122956	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	682	Open in IMG/M
3300006797\|Ga0066659_11269077	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	614	Open in IMG/M
3300006904\|Ga0075424_100448069	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1377	Open in IMG/M
3300007076\|Ga0075435_101478662	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	596	Open in IMG/M
3300009792\|Ga0126374_11321769	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	583	Open in IMG/M
3300010043\|Ga0126380_10427612	Not Available	993	Open in IMG/M
3300010046\|Ga0126384_10111782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	2038	Open in IMG/M
3300010046\|Ga0126384_10599627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300010048\|Ga0126373_12085648	Not Available	629	Open in IMG/M
3300010048\|Ga0126373_12986960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	527	Open in IMG/M
3300010303\|Ga0134082_10457498	Not Available	552	Open in IMG/M
3300010358\|Ga0126370_10110585	Not Available	1924	Open in IMG/M
3300010358\|Ga0126370_12000293	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	566	Open in IMG/M
3300010358\|Ga0126370_12265399	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	537	Open in IMG/M
3300010361\|Ga0126378_13358921	Not Available	508	Open in IMG/M
3300010362\|Ga0126377_10783141	Not Available	1011	Open in IMG/M
3300010366\|Ga0126379_10612157	Not Available	1176	Open in IMG/M
3300010376\|Ga0126381_104207209	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	558	Open in IMG/M
3300010398\|Ga0126383_10681814	Not Available	1105	Open in IMG/M
3300010398\|Ga0126383_10835216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300010398\|Ga0126383_11215679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	843	Open in IMG/M
3300010398\|Ga0126383_12074834	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	656	Open in IMG/M
3300010400\|Ga0134122_10597807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1019	Open in IMG/M
3300012208\|Ga0137376_10382630	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300012209\|Ga0137379_10714520	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300012211\|Ga0137377_10233432	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300012362\|Ga0137361_11272239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	659	Open in IMG/M
3300012948\|Ga0126375_10079779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1869	Open in IMG/M
3300012948\|Ga0126375_11290718	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	613	Open in IMG/M
3300012948\|Ga0126375_11522537	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	573	Open in IMG/M
3300012951\|Ga0164300_10567188	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300012971\|Ga0126369_10443297	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1346	Open in IMG/M
3300012971\|Ga0126369_10591086	Not Available	1179	Open in IMG/M
3300012971\|Ga0126369_11000891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300012971\|Ga0126369_11347005	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	804	Open in IMG/M
3300012971\|Ga0126369_13326159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	527	Open in IMG/M
3300016270\|Ga0182036_11761340	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	524	Open in IMG/M
3300016294\|Ga0182041_10050376	All Organisms → cellular organisms → Bacteria	2814	Open in IMG/M
3300016294\|Ga0182041_10547576	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1010	Open in IMG/M
3300016294\|Ga0182041_11140057	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	709	Open in IMG/M
3300016294\|Ga0182041_11872165	Not Available	557	Open in IMG/M
3300016319\|Ga0182033_11209892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300016341\|Ga0182035_10141913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1831	Open in IMG/M
3300016341\|Ga0182035_10416151	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1132	Open in IMG/M
3300016341\|Ga0182035_11457328	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300016357\|Ga0182032_10269949	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1331	Open in IMG/M
3300016371\|Ga0182034_10890010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300016371\|Ga0182034_11912520	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	524	Open in IMG/M
3300016387\|Ga0182040_10502958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300016387\|Ga0182040_10772507	Not Available	790	Open in IMG/M
3300016387\|Ga0182040_11366114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300016404\|Ga0182037_10113380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1977	Open in IMG/M
3300016422\|Ga0182039_11401823	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	635	Open in IMG/M
3300016445\|Ga0182038_10064487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2513	Open in IMG/M
3300016445\|Ga0182038_10964757	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	753	Open in IMG/M
3300021560\|Ga0126371_11825034	Not Available	729	Open in IMG/M
3300025898\|Ga0207692_10095481	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1621	Open in IMG/M
3300025910\|Ga0207684_11288187	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	602	Open in IMG/M
3300025915\|Ga0207693_10025710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4665	Open in IMG/M
3300026307\|Ga0209469_1044375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1427	Open in IMG/M
3300027874\|Ga0209465_10368419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300028793\|Ga0307299_10169357	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	822	Open in IMG/M
3300031544\|Ga0318534_10396296	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031545\|Ga0318541_10284245	Not Available	921	Open in IMG/M
3300031545\|Ga0318541_10850000	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	509	Open in IMG/M
3300031546\|Ga0318538_10503776	Not Available	656	Open in IMG/M
3300031546\|Ga0318538_10614913	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031561\|Ga0318528_10575051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300031572\|Ga0318515_10415500	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	720	Open in IMG/M
3300031572\|Ga0318515_10495603	Not Available	652	Open in IMG/M
3300031573\|Ga0310915_10121830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1781	Open in IMG/M
3300031573\|Ga0310915_10140429	Not Available	1664	Open in IMG/M
3300031573\|Ga0310915_10322902	Not Available	1092	Open in IMG/M
3300031573\|Ga0310915_10985628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300031668\|Ga0318542_10098199	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1410	Open in IMG/M
3300031679\|Ga0318561_10400061	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	754	Open in IMG/M
3300031679\|Ga0318561_10518540	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300031680\|Ga0318574_10264382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	996	Open in IMG/M
3300031719\|Ga0306917_10638710	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	837	Open in IMG/M
3300031723\|Ga0318493_10641727	Not Available	593	Open in IMG/M
3300031736\|Ga0318501_10246451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300031736\|Ga0318501_10545324	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	634	Open in IMG/M
3300031736\|Ga0318501_10698200	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	559	Open in IMG/M
3300031744\|Ga0306918_10875069	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	700	Open in IMG/M
3300031751\|Ga0318494_10375126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300031763\|Ga0318537_10060494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1382	Open in IMG/M
3300031764\|Ga0318535_10316252	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	698	Open in IMG/M
3300031768\|Ga0318509_10154288	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1267	Open in IMG/M
3300031770\|Ga0318521_10818281	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	568	Open in IMG/M
3300031780\|Ga0318508_1182898	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	599	Open in IMG/M
3300031797\|Ga0318550_10277417	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300031797\|Ga0318550_10282370	Not Available	805	Open in IMG/M
3300031819\|Ga0318568_10141582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1465	Open in IMG/M
3300031821\|Ga0318567_10475127	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	709	Open in IMG/M
3300031821\|Ga0318567_10757167	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	550	Open in IMG/M
3300031833\|Ga0310917_10226765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1254	Open in IMG/M
3300031833\|Ga0310917_10299004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1088	Open in IMG/M
3300031833\|Ga0310917_10531938	Not Available	799	Open in IMG/M
3300031846\|Ga0318512_10123565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1233	Open in IMG/M
3300031879\|Ga0306919_10277254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1267	Open in IMG/M
3300031890\|Ga0306925_10295131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1744	Open in IMG/M
3300031890\|Ga0306925_10399334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	1473	Open in IMG/M
3300031890\|Ga0306925_10675255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300031890\|Ga0306925_11167021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300031893\|Ga0318536_10203937	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1006	Open in IMG/M
3300031893\|Ga0318536_10469480	Not Available	633	Open in IMG/M
3300031896\|Ga0318551_10220052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1055	Open in IMG/M
3300031896\|Ga0318551_10619232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	625	Open in IMG/M
3300031897\|Ga0318520_10803107	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	590	Open in IMG/M
3300031910\|Ga0306923_10043676	Not Available	4912	Open in IMG/M
3300031910\|Ga0306923_10701496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300031912\|Ga0306921_10791508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300031912\|Ga0306921_10993922	Not Available	947	Open in IMG/M
3300031942\|Ga0310916_11076962	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	668	Open in IMG/M
3300031946\|Ga0310910_11412192	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	535	Open in IMG/M
3300031947\|Ga0310909_10164237	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300031954\|Ga0306926_10090813	Not Available	3732	Open in IMG/M
3300031954\|Ga0306926_10850007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1096	Open in IMG/M
3300031954\|Ga0306926_12466893	Not Available	571	Open in IMG/M
3300031954\|Ga0306926_12599323	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	552	Open in IMG/M
3300032025\|Ga0318507_10182627	Not Available	903	Open in IMG/M
3300032025\|Ga0318507_10545475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300032035\|Ga0310911_10172630	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1223	Open in IMG/M
3300032042\|Ga0318545_10149420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300032043\|Ga0318556_10045122	All Organisms → cellular organisms → Bacteria → Proteobacteria	2113	Open in IMG/M
3300032043\|Ga0318556_10166515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1141	Open in IMG/M
3300032063\|Ga0318504_10173873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300032063\|Ga0318504_10347465	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	704	Open in IMG/M
3300032064\|Ga0318510_10514356	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	519	Open in IMG/M
3300032066\|Ga0318514_10371765	Not Available	758	Open in IMG/M
3300032068\|Ga0318553_10776085	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	501	Open in IMG/M
3300032076\|Ga0306924_10395908	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1581	Open in IMG/M
3300032076\|Ga0306924_11109958	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	861	Open in IMG/M
3300032090\|Ga0318518_10250942	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	908	Open in IMG/M
3300032094\|Ga0318540_10144456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1138	Open in IMG/M
3300032094\|Ga0318540_10529662	Not Available	568	Open in IMG/M
3300032261\|Ga0306920_102230758	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	760	Open in IMG/M
3300033289\|Ga0310914_10518166	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1078	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.15%
Plants	Host-Associated → Plants	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.33%
Loam	Environmental → Terrestrial → Soil → Loam	14.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100323931	3300000597	Forest Soil	RQRPYKRLSARVDCLEDAISHFYNVINELRRRVSTLEKELKPLAKDEQRRPARTH*
JGI10216J12902_1027219991	3300000956	Soil	TYIRLRARVDRLEDAINHFYNVINEWRRRVSTLEKKSNPLAKKR*
JGI10216J12902_1126227711	3300000956	Soil	RAYIRLYARVDRLEDAISHFYNVINELRKRVSTLEKKLKPLAKDD*
JGI12627J18819_104927262	3300001867	Forest Soil	MRLCARVDCLEDAISHFYNVTKELRDRVSTLEKKLNPLAKQDWTN*
Ga0062595_1023769151	3300004479	Soil	LPSRQRTYRRLHVRVDRLEDAISHFYKVINELRRRVSTLEKKL*
Ga0066388_1018427201	3300005332	Tropical Forest Soil	ARVDRLEDAISHFYNVINELRRRVSTLEKKWKPLAKDELH*
Ga0066388_1056956501	3300005332	Tropical Forest Soil	RLYARVDRLEDTISHFYNVINELRRRVSTLEKKSKPLAKKDE*
Ga0070710_113009763	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ARVDRLEDAISHFYNVINELRERVSTLETKSNPLAKDEWIN*
Ga0070706_1016044042	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RQRTYIRLRARVDHLEDAISHFYNVINELRRRVSTLEKKSKPLAKR*
Ga0070707_1007844421	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PSRQRTYIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR*
Ga0070698_1011925822	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LPSRQRTYIRLRARVDHLEDAISHFYNVINELRRRVSTLEKKPKP*
Ga0066905_1006872243	3300005713	Tropical Forest Soil	ARVDRLEDAISHFYNVINELRRRVSALEKKSKPLAKR*
Ga0066905_1013728451	3300005713	Tropical Forest Soil	RAYIRLYARVDRLEDAISHFYNVINQLRKRVSALEKKLKPLAKDD*
Ga0066903_1000411311	3300005764	Tropical Forest Soil	QRTYIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKLKSAKDAWIH*
Ga0066903_1002602024	3300005764	Tropical Forest Soil	VDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD*
Ga0066903_1018379881	3300005764	Tropical Forest Soil	PSRQRTYVRLRVRVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD*
Ga0066903_1031510791	3300005764	Tropical Forest Soil	VNARIDSLEDSISHFYKVINELRERVSMTEKKLNALAEDNRTS*
Ga0066903_1045125481	3300005764	Tropical Forest Soil	TYIRLSARVDRLEDAMSHFYNVINELRRRVSTLEKKSKPLAKDDWAVYP*
Ga0066903_1055813551	3300005764	Tropical Forest Soil	FFVARKRARVDRLEDAISHVYNVINELRRRVSRLEKKSKPLAKDD*
Ga0066903_1082330122	3300005764	Tropical Forest Soil	MRLYARVDRLEDAISHFYNVINELRERVSTLEKKLERLAKDELH*
Ga0066903_1082573582	3300005764	Tropical Forest Soil	TYIRLHARIDRLEDTISHFYNVVNELRTRVSTLEKKSKPLAKDD*
Ga0066903_1086606002	3300005764	Tropical Forest Soil	NARIDRLEDTITHFYNVINELRRRVSTLEKKSKPLVKDE*
Ga0075417_106510391	3300006049	Populus Rhizosphere	ARVDRLEDAISHFYNVINELRRRVSTLEKQLKPSAKMTKRW*
Ga0070712_1007607843	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RQRTYIRLRARVDHLEDAISHFYNVINELRKRVSKLEKKSKPLAKDD*
Ga0070712_1011229563	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RLRARVDHLEDAISHFYNVINELRRRVSTLEKKPKP*
Ga0066659_112690771	3300006797	Soil	QRTYRHLYVRVDRLEDAISHFYNAINELRGRVSTLEKKLKRPPGGSP*
Ga0075424_1004480691	3300006904	Populus Rhizosphere	RLRARVDHLEDAISHFYNVINELRRRVSTLEKKLKPLAKDDRTN*
Ga0075435_1014786621	3300007076	Populus Rhizosphere	RLRARVDHLEDAISHFYNVINELRRRVSTLEKKSQPLAKR*
Ga0126374_113217691	3300009792	Tropical Forest Soil	YIRLRARVDHLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD*
Ga0126380_104276121	3300010043	Tropical Forest Soil	DRLEDAISHFYNVINDLRRRVSTLEKKSKPLAKR*
Ga0126384_101117821	3300010046	Tropical Forest Soil	LSARVDRLEDAISHFYNVINELRRRVSALEKKSKRL*
Ga0126384_105996272	3300010046	Tropical Forest Soil	LSARVDRLEDAISHFYNVINELRRRVSTLEKKLKPFSQKPLH*
Ga0126373_120856482	3300010048	Tropical Forest Soil	SRQRAYIRLHARVDSLEDAIGHFHNVIYELHTRVSTLEKKLKPLAKDD*
Ga0126373_129869601	3300010048	Tropical Forest Soil	TYIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKDE*
Ga0134082_104574983	3300010303	Grasslands Soil	QRTYRFLHVRVDGFEDAISHFYNVINELRRRVSTLEKKSKPLAKKR*
Ga0126370_101105851	3300010358	Tropical Forest Soil	HLEDAISHFYNVINELRRRVSTLEKKLKPLAKDELH*
Ga0126370_120002932	3300010358	Tropical Forest Soil	SRQRILYARVDRLEDAISHFYNVINELRERVSTLEKKLKPLVKDDWIN*
Ga0126370_122653992	3300010358	Tropical Forest Soil	RLYARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDDRTN*
Ga0126378_133589211	3300010361	Tropical Forest Soil	NARVDRLEDTISHFYNVINELRRRVSALEKKSKPKRRVD*
Ga0126377_107831412	3300010362	Tropical Forest Soil	RTYIRLYARVDRLEDAISHFYNVINELRKRVSMLEKKLKPLAKR*
Ga0126379_106121572	3300010366	Tropical Forest Soil	ARVDRLEDVISHLYNVINELRRRVSTLEKKLTAKDDWIH*
Ga0126381_1042072092	3300010376	Tropical Forest Soil	RQRTYTRLSARVDRLEDTISHFYNVIDELRRRVSMLEKKLKPLAKDD*
Ga0126383_106818143	3300010398	Tropical Forest Soil	DSQGTFIRLYARVDRLKDAISHFYNVINELRRRVSTLEKKSKPLAKDD*
Ga0126383_108352161	3300010398	Tropical Forest Soil	RTYIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLPKDE*
Ga0126383_112156793	3300010398	Tropical Forest Soil	DRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD*
Ga0126383_120748342	3300010398	Tropical Forest Soil	IRLRARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD*
Ga0134122_105978071	3300010400	Terrestrial Soil	RLHARVDRLEDAVSHFYKVINELRERVSTLETKSNPLAKDEWIN*
Ga0137376_103826301	3300012208	Vadose Zone Soil	LRARVDHLEDAISHFYNVINELRKRVSKLEKKSKPSAKDD*
Ga0137379_107145201	3300012209	Vadose Zone Soil	RTYIRLRARVEALEDAISHFYNVINELRGRVSTLEKKLKRPPGGSID*
Ga0137377_102334325	3300012211	Vadose Zone Soil	DHLEDAISHFYNVINELRKRVSKLEKKSKPSAKDD*
Ga0137361_112722391	3300012362	Vadose Zone Soil	RLHVRVDRLEDAISHFYNVINELRRRVSTLEKKSKPFSQKR*
Ga0126375_100797791	3300012948	Tropical Forest Soil	PARQRSYIRLNARVDRLEDTISHFYNVINELHRRVSTLEKKSKPLAKRRVD*
Ga0126375_112907181	3300012948	Tropical Forest Soil	QARVDRLEDAISHFYNVITELRRRVSTLEKKSKPLAKR*
Ga0126375_115225373	3300012948	Tropical Forest Soil	RARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKED*
Ga0164300_105671881	3300012951	Soil	RSYIRLHARVDRLEDAVSHFYKVINELRERVSTLETKSNPLAKDEWIN*
Ga0126369_104432974	3300012971	Tropical Forest Soil	YIRLRARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR*
Ga0126369_105910864	3300012971	Tropical Forest Soil	RTYIRLRARVDHLEDAISHFYNVINELRRRVSTLEKKLKPLAKDELH*
Ga0126369_110008914	3300012971	Tropical Forest Soil	RTYIRLRARVDHLEDAISHFYNVINELRRRVSTLEKKLKPLPKRSLH*
Ga0126369_113470053	3300012971	Tropical Forest Soil	RQRTYIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDDRTN*
Ga0126369_133261591	3300012971	Tropical Forest Soil	IRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKDE*
Ga0182036_117613402	3300016270	Soil	GSFFVARKRARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKND
Ga0182041_100503766	3300016294	Soil	SRQRTYTRLRARVDRLEDAISHFYNVINELRERVSTLEKKLKPLAKNWIN
Ga0182041_105475761	3300016294	Soil	GTFIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKND
Ga0182041_111400571	3300016294	Soil	RARVDRLEDAISHFYNVINELRRRVSRLEKELKPLAKR
Ga0182041_118721651	3300016294	Soil	VDGLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0182033_112098921	3300016319	Soil	LEDAISHFYNVINELRRRVSTLEKKLKPFSQKPLH
Ga0182035_101419135	3300016341	Soil	YIRLYARVDRLEDTISHFYNVINELRERVSTLEKKLKPLAKNWIN
Ga0182035_104161513	3300016341	Soil	YIRLYARVDRLEDTISHFYNVINELRERVSTLEKKLKPLAKDDRIN
Ga0182035_114573281	3300016341	Soil	VRVDGLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0182032_102699492	3300016357	Soil	YTRLRARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLTKDD
Ga0182034_108900101	3300016371	Soil	TYKRLSARVDRLEDAISHFYNVINELRRRVSTLEKKLKPFSQKPLH
Ga0182034_119125203	3300016371	Soil	KRLSARVDALEDAISHFYNVIDELRRRVSTLEKKLKPLAKDD
Ga0182040_105029583	3300016387	Soil	QPTYKRLSARVDRLEDAISHFYNVINELRRRVSTLEKKLKPFSQKPLH
Ga0182040_107725071	3300016387	Soil	HARVDHLEDAISHFYNVINELRRRVSTLEKKLKPLAKDELH
Ga0182040_113661143	3300016387	Soil	DCLEEAISHFYNVINELRRRVSTLEKKLKPLAKDGGGG
Ga0182037_101133806	3300016404	Soil	RLHARVDRLEDAISHFYNVINELGGRVSRLENKLSNQSA
Ga0182039_114018231	3300016422	Soil	TLPSRQRTYTRLRARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0182038_100644871	3300016445	Soil	PSRQRTYTRLRARVDRLEDAISHFYNVINELRERVSTLEKKLKPLAKNWIN
Ga0182038_109647571	3300016445	Soil	VDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKDDRTN
Ga0126371_118250342	3300021560	Tropical Forest Soil	QRTYTRLRARVDLLEDAISHFYNVVNELRRRVSTLEKKLLLKPLAKR
Ga0207692_100954812	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	QRSYIRLHARVDRLEDAISHFYNVINELRERVSTLEKKLNPLAKDEWIN
Ga0207684_112881872	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RLRARVDHLEDAISHFYNVINELRKRVSKLEKKSKPSAKDD
Ga0207693_1002571010	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LHARVDRLEDAISHFYNVINELRERVSTLEKKLNPLAKDEWIN
Ga0209469_10443754	3300026307	Soil	RQRTHIRLHGRVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDDRTNTESLKL
Ga0209465_103684193	3300027874	Tropical Forest Soil	VDRLKDAISHFYNVINELRRRVSTREKKSKPLAKDD
Ga0307299_101693571	3300028793	Soil	DRQRSHIHLHARVDRLEDAISHFYNVINELRERVSTLEKKLNPPAKDEWIN
Ga0318534_103962963	3300031544	Soil	YIRLYARVDRLGDAMSHFYDVINELRRRVSTLEKKSKPLAKR
Ga0318541_102842451	3300031545	Soil	IRLRARVDRLEDAISHFYNVVNELRRRVSMLEKKKSKPLAKR
Ga0318541_108500003	3300031545	Soil	IRLRARVDHLEDAISHFYNVINELRSRVSRLEKKLKPFSQRPLH
Ga0318538_105037762	3300031546	Soil	SGDRLEDAISHFYNVVNELRRRVSMLEKKKSKPLAKR
Ga0318538_106149131	3300031546	Soil	TYIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0318528_105750511	3300031561	Soil	RTYIRLYARVDRLEDAISHFYDVINVLRRRVSTLEKKSKPLAKDGRTIN
Ga0318515_104155003	3300031572	Soil	YTRLYARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD
Ga0318515_104956031	3300031572	Soil	SRSGDRLEDAISHFYNVVNELRRRVSMLEKKKSKPLAKR
Ga0310915_101218301	3300031573	Soil	IRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKND
Ga0310915_101404297	3300031573	Soil	TLPSRQRTYIRLHARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0310915_103229021	3300031573	Soil	VDHLEDAISHFYNVINELRRRVSMLEKKSKPLAKDE
Ga0310915_109856281	3300031573	Soil	RARVDCLEDAISHFYNVINELRRRVSTLEKKLKPLAKDGGGG
Ga0318542_100981992	3300031668	Soil	RVDHLEDAISHFYNVINELRGRVSTLEKKLKLAKDDWIH
Ga0318561_104000613	3300031679	Soil	TEAARQRTYIRLRARVDHLEDASSHFYNVINELRRRVSTLEKKLKPLGKDD
Ga0318561_105185403	3300031679	Soil	SRQRTYRFLHVRVDGLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0318574_102643821	3300031680	Soil	RVHARVDSLEDAIGHFHNVIYELHTRVSTLEKKSKPLAKDD
Ga0306917_106387101	3300031719	Soil	RTYIRLQARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD
Ga0318493_106417272	3300031723	Soil	LEDAISHFYNVINELRRRVSTLEKKLKPLAKDELH
Ga0318501_102464511	3300031736	Soil	YIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0318501_105453241	3300031736	Soil	RLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKDDRTN
Ga0318501_106982001	3300031736	Soil	RQLTYTRLRARVDRLEDAISHFYNVINELRRRVSTLEKKSKALAKR
Ga0306918_108750691	3300031744	Soil	HLYARVDRLEDAISHFYNVINEFRKRVSTLEKKLKPLAKDD
Ga0318494_103751261	3300031751	Soil	YIRLSARVNRLEDAISHFYDVINELRRRVSTLEKKSKPLAKR
Ga0318537_100604944	3300031763	Soil	YIRLYARVDRLEDAIGHFYKVINELRKRVSTLEKKLKPLAKDDRTH
Ga0318535_103162522	3300031764	Soil	DIRLHARVDHLEDAISHFYNVINELRRRVSTLEKKLKPLAKDELH
Ga0318509_101542881	3300031768	Soil	NIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKDDRTN
Ga0318521_108182811	3300031770	Soil	YIRLRARVDRLEDAISHFYNVINELRRRVSTLEKN
Ga0318508_11828981	3300031780	Soil	PSRQRTYIRLRARVDHLEDAISHFYNVINELRRRVPTLEKKSKPLAKR
Ga0318550_102774173	3300031797	Soil	YIRLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKDDRTN
Ga0318550_102823701	3300031797	Soil	SCQRTYIHLYARVHGLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD
Ga0318568_101415824	3300031819	Soil	YIRLYARVDRLEDAISHFYDVINELRRRVSTLEKKSKPLAKR
Ga0318567_104751272	3300031821	Soil	TYTRLRARVDRLEDAISHFYNVINELRERVSTLEKKLKPLAKDDRIN
Ga0318567_107571672	3300031821	Soil	PTYKRLSARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKAELH
Ga0310917_102267654	3300031833	Soil	RLRARVDRLEDAISHFYNVINELRRRVSTLEKKSKALAKR
Ga0310917_102990042	3300031833	Soil	LEDAINHFYYVMNELRRRVSTLEKKLKPLAKDELH
Ga0310917_105319383	3300031833	Soil	ARQRTYIRLRARVDHLEDAISHFYNVINELRRRVSMLEKKSKPLAKDE
Ga0318512_101235654	3300031846	Soil	AYIRLYARVDRLEDAIGHFYKVINELRKRVSTLEKKLKPLAKDDRTH
Ga0306919_102772543	3300031879	Soil	GTFIRLYARVDRLKDAISHFYNVINELRRRVSTREKKSKPLAKDD
Ga0306925_102951313	3300031890	Soil	RVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKND
Ga0306925_103993341	3300031890	Soil	RTYTRLRARVDRLEDAISHFYNVINELRRRVSTLEKN
Ga0306925_106752551	3300031890	Soil	RLSVRVDRLEDAINHFYNVINELRRRVSTLEKKLKPLAKDELH
Ga0306925_111670211	3300031890	Soil	ARVDRLEDAISHFYNVINELRRRVSTLEKKLKPFSQKPLH
Ga0318536_102039371	3300031893	Soil	PARQPTYKRLSARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKAELH
Ga0318536_104694801	3300031893	Soil	RTYIRLRARVDHLEDASSHFYNVINELRRRVSTLEKKLKPLGKDD
Ga0318551_102200523	3300031896	Soil	RTYIRLHSRVDRLEDAISHFYNVINELRKRVSALEKKLKPSAKDDRTIN
Ga0318551_106192321	3300031896	Soil	RSPLGSFFVARKRARVDRLEDAISHFYNVINELRRRVSRLEKKLNPLAKR
Ga0318520_108031071	3300031897	Soil	YIRLYARVDRLEDTISHFYNVINELRRRVSTLEKKLKPLAKDD
Ga0306923_100436761	3300031910	Soil	LHVRVDGLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0306923_107014965	3300031910	Soil	LRARVDCLEDAISHFYNVINELRRRVSTLEKKLKPLAKDGGGG
Ga0306921_107915081	3300031912	Soil	LPSRQRTYTRLYARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD
Ga0306921_109939223	3300031912	Soil	DRDELVSKLERAVVHFYNVINELRRRVSTLEKKLKPLAKDD
Ga0310916_110769622	3300031942	Soil	YKRLSARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKAELH
Ga0310910_114121922	3300031946	Soil	TLPSRQRTYIRLYARVDRLEDAISHFYDVINELRRRVSTLEKKSKPLAKR
Ga0310909_101642371	3300031947	Soil	RQRTYTRLYARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD
Ga0306926_100908131	3300031954	Soil	RLYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0306926_108500071	3300031954	Soil	PSRQRTYTRLRARVDRLEDAISHFYNVINELRRRVSTLEKKSKALAKR
Ga0306926_124668933	3300031954	Soil	RTYIRLHARVDRLEDEISHLYNVINELRRRVSTLEKKLRPLAKDELH
Ga0306926_125993231	3300031954	Soil	RLRARVDHLEDAISHFYNVINELRRRVSTLEKKLKPLAKDD
Ga0318507_101826272	3300032025	Soil	PSRSGDRLEDAISHFYNVVNELRRRVSMLEKKKSKPLAKR
Ga0318507_105454751	3300032025	Soil	LYARVDRLEDAISHFYDVINVLRRRVSTLEKKSKPLAKDGRTIN
Ga0310911_101726301	3300032035	Soil	PSRQRTYTRLRARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0318545_101494202	3300032042	Soil	IRLSARVDRLEDAISHFYDVINELRRRVSTLEKKSKPLAKT
Ga0318556_100451221	3300032043	Soil	IRLRARVDHLEDAISHFYNVINELRGRVSTLEKKLKLAKDDWIH
Ga0318556_101665153	3300032043	Soil	YIRLHARVDSLEDAIGHFHNVIYELHTRVSTLEKKSKPLAKDD
Ga0318504_101738731	3300032063	Soil	RKILDTTAISHFYNVINDLRRRVSTLEKKLKPLAKDD
Ga0318504_103474651	3300032063	Soil	RTYTRLRARVDRLEDAISHFYNVINELRRRVSRLEKELKPLAKR
Ga0318510_105143561	3300032064	Soil	LYARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0318514_103717653	3300032066	Soil	RAYIRLHARVDSLEDAIGHFHNVIYELHTRVSTLEKKSKPLAKDD
Ga0318553_107760853	3300032068	Soil	YIRLRARVDHLEDAISHFYNVINELRSRVSRLEKKLKPFSQRPLH
Ga0306924_103959081	3300032076	Soil	RLRARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKR
Ga0306924_111099581	3300032076	Soil	TLPSRQRTYTRLRARVDRLEDAISHFYNVINELRRRVSTLEKKSKALAKR
Ga0318518_102509421	3300032090	Soil	ARLRARVDRLEDAISHFYNVINELRSRVSRLEKKLKPFSQRPLH
Ga0318540_101444561	3300032094	Soil	RDYIRLYARVDRLEDAIGHFYKVINELRKRVSTLEKKLKPLAKDDRTH
Ga0318540_105296622	3300032094	Soil	VDRLEDAISHFYNVINELRRRFSTLEKKSKLLAKD
Ga0306920_1022307581	3300032261	Soil	TYKRLSARVDRLEDAISHFYNVINELRRRVSTLEKKLKPLAKAELH
Ga0310914_105181663	3300033289	Soil	YARVDRLEDAISHFYNVINELRRRVSTLEKKSKPLAKND

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040227

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences