Metagenome / Metatranscriptome Family F040201

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040201
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	54 residues
Representative Sequence	MNTRISSKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATFQWLI
Number of Associated Samples	109
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.65 %
% of genes near scaffold ends (potentially truncated)	14.81 %
% of genes from short scaffolds (< 2000 bps)	74.07 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.691 % of family members)
Environment Ontology (ENVO)	Unclassified (37.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.432 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.20% β-sheet: 0.00% Coil/Unstructured: 37.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF07676	PD40	22.84
PF05036	SPOR	4.32
PF07730	HisKA_3	1.23
PF13442	Cytochrome_CBB3	1.23
PF01554	MatE	1.23
PF13609	Porin_4	0.62
PF04997	RNA_pol_Rpb1_1	0.62
PF07690	MFS_1	0.62
PF14552	Tautomerase_2	0.62
PF01979	Amidohydro_1	0.62
PF14559	TPR_19	0.62
PF00583	Acetyltransf_1	0.62
PF07702	UTRA	0.62
PF01799	Fer2_2	0.62
PF13844	Glyco_transf_41	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.23
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.23
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.23
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.23
COG0086	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	Transcription [K]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.20 %
Unclassified	root	N/A	35.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.20 %
Unclassified	root	N/A	35.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.20 %
Unclassified	root	N/A	35.80 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.30 %
Unclassified	root	N/A	35.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	22.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.49 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.23 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.23 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.23 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.23 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	1.23 %
Peptostreptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae	1.23 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1.23 %
Clostridioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Clostridioides	1.23 %
unclassified Sphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Clostridioides difficile	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile	1.23 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1.23 %
Sphingobium sp. 66-54	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. 66-54	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001087\|JGI12677J13195_1008193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300001546\|JGI12659J15293_10011039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2524	Open in IMG/M
3300001593\|JGI12635J15846_10203117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1309	Open in IMG/M
3300001661\|JGI12053J15887_10053871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2246	Open in IMG/M
3300002245\|JGIcombinedJ26739_101193537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300002917\|JGI25616J43925_10308748	Not Available	588	Open in IMG/M
3300004092\|Ga0062389_101185037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	950	Open in IMG/M
3300004635\|Ga0062388_100217914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1523	Open in IMG/M
3300005591\|Ga0070761_10127905	Not Available	1478	Open in IMG/M
3300005602\|Ga0070762_10000619	All Organisms → cellular organisms → Bacteria → Proteobacteria	15391	Open in IMG/M
3300005610\|Ga0070763_10606082	Not Available	635	Open in IMG/M
3300005640\|Ga0075035_1379473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300005712\|Ga0070764_10626802	Not Available	657	Open in IMG/M
3300005712\|Ga0070764_10969618	Not Available	535	Open in IMG/M
3300005921\|Ga0070766_10070749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2008	Open in IMG/M
3300005944\|Ga0066788_10105647	Not Available	699	Open in IMG/M
3300005949\|Ga0066791_10022607	Not Available	1265	Open in IMG/M
3300005993\|Ga0080027_10058841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1399	Open in IMG/M
3300005994\|Ga0066789_10008014	All Organisms → cellular organisms → Bacteria	4689	Open in IMG/M
3300006176\|Ga0070765_100302709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1478	Open in IMG/M
3300006176\|Ga0070765_100508634	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300006176\|Ga0070765_100554559	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300006638\|Ga0075522_10323265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	743	Open in IMG/M
3300009627\|Ga0116109_1169817	Not Available	514	Open in IMG/M
3300010396\|Ga0134126_12912125	Not Available	518	Open in IMG/M
3300011120\|Ga0150983_15391996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300011269\|Ga0137392_10895737	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012202\|Ga0137363_11492031	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012924\|Ga0137413_10074023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2050	Open in IMG/M
3300012924\|Ga0137413_10323538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1085	Open in IMG/M
3300012924\|Ga0137413_11144194	Not Available	618	Open in IMG/M
3300012930\|Ga0137407_10552415	Not Available	1078	Open in IMG/M
3300012930\|Ga0137407_11387759	Not Available	668	Open in IMG/M
3300014501\|Ga0182024_10017768	All Organisms → cellular organisms → Bacteria → Proteobacteria	13312	Open in IMG/M
3300014501\|Ga0182024_10115900	All Organisms → cellular organisms → Bacteria → Proteobacteria	3849	Open in IMG/M
3300015160\|Ga0167642_1004385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2660	Open in IMG/M
3300015206\|Ga0167644_1010933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4484	Open in IMG/M
3300015206\|Ga0167644_1024182	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300015206\|Ga0167644_1140383	Not Available	629	Open in IMG/M
3300019882\|Ga0193713_1010713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2780	Open in IMG/M
3300019886\|Ga0193727_1025894	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300019887\|Ga0193729_1030030	All Organisms → cellular organisms → Bacteria → Proteobacteria	2301	Open in IMG/M
3300019890\|Ga0193728_1108623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1273	Open in IMG/M
3300019999\|Ga0193718_1120648	Not Available	519	Open in IMG/M
3300020021\|Ga0193726_1000083	All Organisms → cellular organisms → Bacteria → Proteobacteria	165989	Open in IMG/M
3300020021\|Ga0193726_1003858	All Organisms → cellular organisms → Bacteria → Proteobacteria	9333	Open in IMG/M
3300020021\|Ga0193726_1006951	All Organisms → cellular organisms → Bacteria → Proteobacteria	6494	Open in IMG/M
3300020021\|Ga0193726_1017199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3733	Open in IMG/M
3300020021\|Ga0193726_1056454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1859	Open in IMG/M
3300020021\|Ga0193726_1129814	Not Available	1115	Open in IMG/M
3300020021\|Ga0193726_1258253	Not Available	701	Open in IMG/M
3300020027\|Ga0193752_1160619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	877	Open in IMG/M
3300020034\|Ga0193753_10016207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	4529	Open in IMG/M
3300020034\|Ga0193753_10174944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1003	Open in IMG/M
3300020034\|Ga0193753_10240141	Not Available	810	Open in IMG/M
3300020034\|Ga0193753_10317489	Not Available	662	Open in IMG/M
3300020060\|Ga0193717_1045482	Not Available	1588	Open in IMG/M
3300020060\|Ga0193717_1108126	Not Available	869	Open in IMG/M
3300020061\|Ga0193716_1106847	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300020199\|Ga0179592_10000060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46882	Open in IMG/M
3300020579\|Ga0210407_10001521	All Organisms → cellular organisms → Bacteria → Proteobacteria	21521	Open in IMG/M
3300020579\|Ga0210407_10148654	All Organisms → cellular organisms → Bacteria → Proteobacteria	1805	Open in IMG/M
3300020579\|Ga0210407_10966687	Not Available	651	Open in IMG/M
3300020580\|Ga0210403_10115801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2179	Open in IMG/M
3300020580\|Ga0210403_10294761	Not Available	1329	Open in IMG/M
3300020580\|Ga0210403_10959208	Not Available	671	Open in IMG/M
3300020581\|Ga0210399_10967794	Not Available	687	Open in IMG/M
3300020582\|Ga0210395_10451986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300020582\|Ga0210395_11366611	Not Available	517	Open in IMG/M
3300020582\|Ga0210395_11387981	Not Available	513	Open in IMG/M
3300020583\|Ga0210401_10005713	All Organisms → cellular organisms → Bacteria → Proteobacteria	12766	Open in IMG/M
3300021088\|Ga0210404_10437640	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300021168\|Ga0210406_10007380	All Organisms → cellular organisms → Bacteria → Proteobacteria	11176	Open in IMG/M
3300021168\|Ga0210406_10187805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1719	Open in IMG/M
3300021168\|Ga0210406_10222522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1558	Open in IMG/M
3300021168\|Ga0210406_10786860	Not Available	725	Open in IMG/M
3300021170\|Ga0210400_10836882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	753	Open in IMG/M
3300021401\|Ga0210393_10027588	All Organisms → cellular organisms → Bacteria → Proteobacteria	4432	Open in IMG/M
3300021401\|Ga0210393_10617864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile	885	Open in IMG/M
3300021401\|Ga0210393_11629436	Not Available	511	Open in IMG/M
3300021403\|Ga0210397_10022043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3926	Open in IMG/M
3300021404\|Ga0210389_10060840	All Organisms → cellular organisms → Bacteria → Proteobacteria	2895	Open in IMG/M
3300021404\|Ga0210389_10177739	All Organisms → cellular organisms → Bacteria → Proteobacteria	1656	Open in IMG/M
3300021404\|Ga0210389_10656218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	823	Open in IMG/M
3300021404\|Ga0210389_10689543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300021404\|Ga0210389_11277557	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300021405\|Ga0210387_10000080	All Organisms → cellular organisms → Bacteria → Proteobacteria	68707	Open in IMG/M
3300021405\|Ga0210387_10019642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5256	Open in IMG/M
3300021432\|Ga0210384_11154305	Not Available	678	Open in IMG/M
3300021433\|Ga0210391_10822066	Not Available	726	Open in IMG/M
3300021475\|Ga0210392_10014854	All Organisms → cellular organisms → Bacteria	4276	Open in IMG/M
3300021475\|Ga0210392_10258534	Not Available	1236	Open in IMG/M
3300021475\|Ga0210392_10290274	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300021475\|Ga0210392_11045950	Not Available	611	Open in IMG/M
3300021478\|Ga0210402_10005556	All Organisms → cellular organisms → Bacteria	11272	Open in IMG/M
3300022726\|Ga0242654_10096983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	921	Open in IMG/M
3300023030\|Ga0224561_1002950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1177	Open in IMG/M
3300023255\|Ga0224547_1000044	All Organisms → cellular organisms → Bacteria → Proteobacteria	31080	Open in IMG/M
3300024222\|Ga0247691_1003150	All Organisms → cellular organisms → Bacteria → Proteobacteria	3015	Open in IMG/M
3300025463\|Ga0208193_1092078	Not Available	592	Open in IMG/M
3300025544\|Ga0208078_1048517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	905	Open in IMG/M
3300025627\|Ga0208220_1066629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1020	Open in IMG/M
3300025633\|Ga0208480_1030116	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300025664\|Ga0208849_1157314	Not Available	585	Open in IMG/M
3300026281\|Ga0209863_10141719	Not Available	703	Open in IMG/M
3300026291\|Ga0209890_10129411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300026304\|Ga0209240_1195486	Not Available	611	Open in IMG/M
3300026374\|Ga0257146_1051314	Not Available	668	Open in IMG/M
3300026467\|Ga0257154_1080990	Not Available	518	Open in IMG/M
3300026557\|Ga0179587_10331475	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300026557\|Ga0179587_10351127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	956	Open in IMG/M
3300026557\|Ga0179587_10806677	Not Available	619	Open in IMG/M
3300026557\|Ga0179587_10927646	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300027002\|Ga0209110_1009933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1065	Open in IMG/M
3300027030\|Ga0208240_1001074	All Organisms → cellular organisms → Bacteria → Proteobacteria	2889	Open in IMG/M
3300027117\|Ga0209732_1008781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1679	Open in IMG/M
3300027176\|Ga0208992_1035179	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300027496\|Ga0208987_1003581	All Organisms → cellular organisms → Bacteria	2470	Open in IMG/M
3300027521\|Ga0209524_1104688	Not Available	593	Open in IMG/M
3300027567\|Ga0209115_1070735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	795	Open in IMG/M
3300027574\|Ga0208982_1031585	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300027648\|Ga0209420_1135036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile	683	Open in IMG/M
3300027652\|Ga0209007_1003704	All Organisms → cellular organisms → Bacteria → Proteobacteria	4280	Open in IMG/M
3300027684\|Ga0209626_1033847	Not Available	1254	Open in IMG/M
3300027768\|Ga0209772_10273702	Not Available	535	Open in IMG/M
3300027826\|Ga0209060_10436329	Not Available	595	Open in IMG/M
3300027842\|Ga0209580_10698453	Not Available	501	Open in IMG/M
3300027855\|Ga0209693_10422158	Not Available	643	Open in IMG/M
3300027855\|Ga0209693_10470454	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300027879\|Ga0209169_10460357	Not Available	668	Open in IMG/M
3300027879\|Ga0209169_10684808	Not Available	532	Open in IMG/M
3300027895\|Ga0209624_10251284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1176	Open in IMG/M
3300028016\|Ga0265354_1000943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4602	Open in IMG/M
3300028023\|Ga0265357_1006437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300028047\|Ga0209526_10117145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1872	Open in IMG/M
3300028742\|Ga0302220_10355186	Not Available	529	Open in IMG/M
3300028775\|Ga0302231_10485820	Not Available	522	Open in IMG/M
3300028906\|Ga0308309_10464467	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300029910\|Ga0311369_10950474	Not Available	682	Open in IMG/M
3300030740\|Ga0265460_11642842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300030977\|Ga0265721_1004884	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300031018\|Ga0265773_1042691	Not Available	524	Open in IMG/M
3300031057\|Ga0170834_104971653	Not Available	547	Open in IMG/M
3300031057\|Ga0170834_105796142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1511	Open in IMG/M
3300031057\|Ga0170834_107128266	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031057\|Ga0170834_111542302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1539	Open in IMG/M
3300031231\|Ga0170824_103364838	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300031231\|Ga0170824_114392321	Not Available	614	Open in IMG/M
3300031231\|Ga0170824_116065765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1901	Open in IMG/M
3300031446\|Ga0170820_13006390	Not Available	614	Open in IMG/M
3300031616\|Ga0307508_10217896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1509	Open in IMG/M
3300031708\|Ga0310686_105054082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4545	Open in IMG/M
3300031708\|Ga0310686_112698480	Not Available	593	Open in IMG/M
3300031708\|Ga0310686_113316186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3240	Open in IMG/M
3300031708\|Ga0310686_115365288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	5635	Open in IMG/M
3300031708\|Ga0310686_117758100	Not Available	826	Open in IMG/M
3300031715\|Ga0307476_11323628	Not Available	525	Open in IMG/M
3300031718\|Ga0307474_10008546	All Organisms → cellular organisms → Bacteria → Proteobacteria	7396	Open in IMG/M
3300031718\|Ga0307474_10054867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2945	Open in IMG/M
3300031754\|Ga0307475_10738549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	783	Open in IMG/M
3300032180\|Ga0307471_100577403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. 66-54	1281	Open in IMG/M
3300033547\|Ga0316212_1073204	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.53%
Host-Associated	Host-Associated	2.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.44%
Aquatic	Environmental → Aquatic	3.09%
Plants	Host-Associated → Plants	2.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.98%
Freshwater	Environmental → Aquatic → Freshwater	3.09%
Peat	Environmental → Terrestrial → Peat	2.47%
Roots	Host-Associated → Plants → Roots	1.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.23%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.05%
Loam	Environmental → Terrestrial → Soil → Loam	20.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.47%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.23%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.37%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.23%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.09%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.47%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.47%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.23%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.23%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.23%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.62%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.62%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.62%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001087	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009627	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030977	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12677J13195_10081931	3300001087	Forest Soil	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAHTQQHLSVISFAKQLATFQWLI*
JGI12659J15293_100110392	3300001546	Forest Soil	MNTRTSSKLAAFAIALMMNSFIFGGVAYLFDAQTQQHSALISLAKQIATFRWLI*
JGI12635J15846_102031172	3300001593	Forest Soil	MNTRISTKLAALATALMMNGLIIGGVAYLFDAQTQQHLSVISFAKQLATFQWLI*
JGI12053J15887_100538712	3300001661	Forest Soil	MNTRTSSKLAALAIALMMNSLIMGGVAYLFDAQTHQIVSAPSFAKQMAAFKWVI*
JGIcombinedJ26739_1011935372	3300002245	Forest Soil	SSKLAALATALMMNGLLFGGVAYLFDAQTQPHXSLISLAKQIVAIQSLI*
JGI25616J43925_103087481	3300002917	Grasslands Soil	MNTRISSKLAALAIALLMNSVIIGGVAYLFDAQTQQHLTVISFAKRLAAFQWLI*
Ga0062389_1011850372	3300004092	Bog Forest Soil	MNTRISAKLAALAIALMMNGLIIGAVAYLFDVQTQQHLSVISFAKQLAAFQGLI*
Ga0062388_1002179142	3300004635	Bog Forest Soil	MDTRISSKLAALAIALMMNSVIIGGVAYLFDAQTQQHLSVVFAKQMATFQWVI*
Ga0070761_101279052	3300005591	Soil	MNIRISTKLTALAIALMMNGFIMGGVAYLFDVQTQQHLPLISFAKQLAAFEGLI*
Ga0070762_1000061917	3300005602	Soil	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATFQWLI*
Ga0070763_106060821	3300005610	Soil	MNTRISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHLPLISFAKQLAAFEGLI*
Ga0075035_13794731	3300005640	Permafrost Soil	MTTRISSKLAALAIALMMNSLIIGGVAYLFDAQSHEHGSVISLATQIAKFQCLI*
Ga0070764_106268022	3300005712	Soil	MTTRISAKLAALAIALMMNTLIIGGVAYLFEAQTHEHTSFFSMAKHIAKFQRLI*
Ga0070764_109696182	3300005712	Soil	MNTRISSKLAALAIALMMNSFIIGGVAYLFDAQAQQHVSVFTFAKQMAAFQWVI*
Ga0070766_100707492	3300005921	Soil	MNTRISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHLSLISFAKQLAAFQWLI*
Ga0066788_101056472	3300005944	Soil	MQTATFQETFMNTRISSKLAALAIALMMNSFIIGGVAYLSDAQTQQHLSAVSIAKRLAAFQWLI*
Ga0066791_100226072	3300005949	Soil	RISSKLAALAIALMMNSLIIGGVAYLFDAQSHEHGSVISLATQIAKFQCLI*
Ga0080027_100588412	3300005993	Prmafrost Soil	MNTRISSKLAALAIALMMNSFIIGGVAYLFDAQTQQHLSAVSIAKRLAAFQWLI*
Ga0066789_100080142	3300005994	Soil	MNTRISTKLAALAIALMMNSMLFGGVAYLFDTQAHQHSSLMALVKQIATFQGLI*
Ga0070765_1003027092	3300006176	Soil	MTTRISAKFAALAIALMMNGFIIGGVAYLFDAQTQPHLSVISFAKQLAAFQWLI*
Ga0070765_1005086342	3300006176	Soil	MNTRISSKLAALAIALLMNSVIIGGVAYLFDAQTQQHVSVISFAKRLAAFQWLI*
Ga0070765_1005545592	3300006176	Soil	MNTRISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHLSLISFAKQLAAFEWLI*
Ga0075522_103232651	3300006638	Arctic Peat Soil	MNTRISAKLAALAVALMMNGFIIGGVAYLFDVQTHQNLSVISFAKQLAAFQWLI*
Ga0116109_11698172	3300009627	Peatland	MKANLQETVMNTRISSKLAALAIALMMNTVIIGGVAYLFDMQTQQHLSMFTFAKQMAAFQWVI*
Ga0134126_129121252	3300010396	Terrestrial Soil	MNTRISSKLAALAIALMMNGFILGGVAYLFDAQTQQHSSVVSVAKQLAAFQWLI*
Ga0150983_153919961	3300011120	Forest Soil	PVNANLQETIMNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATLQWLI*
Ga0137392_108957371	3300011269	Vadose Zone Soil	MNTRISSKLAAFAVALMMNSVIIGGVAYLFDAQAQQHLSVISFAKRLAAFQWLI*
Ga0137363_114920312	3300012202	Vadose Zone Soil	RGETMNTRTSSKLAAFAIALMMNGFIIGGVAYSFDAQTQGHSSLISLAKQIATFQWLI*
Ga0137413_100740232	3300012924	Vadose Zone Soil	MNTKISAKLAALAIALMMNTLIIGGVAYLFDAQTQPHLTVLSIAKQLAQFQWLI*
Ga0137413_103235382	3300012924	Vadose Zone Soil	MNTRTSSKLAAFAIAVMMNGFIIGGVAYLFDAQTQGHSSLISLAKQIATFQWLI*
Ga0137413_111441942	3300012924	Vadose Zone Soil	MNTKISAKLAALAIALMMNGLIIGGVAYLFDAQAQPHLTVLSFAKQLAQFQWVI*
Ga0137407_105524152	3300012930	Vadose Zone Soil	RGETMNTRTSSKLAAFAIAVMMNGFIIGGVAYLFDAQTQGHSSLISLAKQIATFQWLI*
Ga0137407_113877592	3300012930	Vadose Zone Soil	MNTRISSKLAALAVALMMNSILFGGVAYLFDTQAHPHSPLIALIALVKQIATFQALI*
Ga0182024_100177684	3300014501	Permafrost	MNTRTSSKLAAFAIALMMNSFIFGGVAYLFDAQTQQHSALISLAKQIATFQWLI*
Ga0182024_101159002	3300014501	Permafrost	MNSRISSKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLAAFQWLI*
Ga0167642_10043852	3300015160	Glacier Forefield Soil	MNTRTSSKLAAFAFALMMNGFIIVGVAYLFDAQTQQHSSLLSLAKQIATFQWLI*
Ga0167644_10109332	3300015206	Glacier Forefield Soil	MNTRISTKLTALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLAAFQWLI*
Ga0167644_10241823	3300015206	Glacier Forefield Soil	MTTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLAAFQWLI*
Ga0167644_11403832	3300015206	Glacier Forefield Soil	MTTRISAKVAALAIALMMNAFIIGGVAYLFEVQTPEHTSVLSMARHIAMFQRLI*
Ga0193713_10107132	3300019882	Soil	MNTRISSKLAAFAIALMMNSFIIGGVAYLFDAQTQQHSSLLSLAKQIAAFQWLI
Ga0193727_10258942	3300019886	Soil	MNTRISSKLAAFAIALMMNSFIIGGVAYLFDAQTQQHSSLISLAKRIATFQWLI
Ga0193729_10300302	3300019887	Soil	MNTRISTKLAALAIALMMNSILFGGVAYLFDTQAHQHSLIALAKQIAAFHALI
Ga0193728_11086232	3300019890	Soil	MATRTSSKLAAFAIALMMNSFIIGGVAYLFDAQTQQHSSLLSLAKQIAMFQWLI
Ga0193718_11206482	3300019999	Soil	MNTRISAKLAALAIALMMNGLIIGGVGYLFDAQTQPHLTVLSFAKQLAQFQWVI
Ga0193726_100008383	3300020021	Soil	MTTRISAKLTALAIALMMNGFIVGGVAYLFDAQTQAHLSVISFAKQLAAFQWLI
Ga0193726_10038582	3300020021	Soil	VNTRTSSKLAAFAIALMMNSFIIGGVAYLFDAQTHQHSSPISLAERMATFRYLI
Ga0193726_10069518	3300020021	Soil	MNTRTSSKLAALAIALMMNSLIMGGVAYLFDAQTHQIVSAPSFAKQMAAFKWVI
Ga0193726_10171992	3300020021	Soil	MNTRTSSKLAAFAIALMMNGFIIGGVAYLFDAQTQQHSSLLSLAKQMAKFQWLI
Ga0193726_10564542	3300020021	Soil	MNTRISAKLAALAIALMMNTLIIGGVAYLFDAQTQPHLTVLSFAKQLAQFQWLI
Ga0193726_11298142	3300020021	Soil	MNTRISSKLAAFAIALMMNTVIIGGVAYLFDAQTQQHSSLISLAKQIATFQWLI
Ga0193726_12582532	3300020021	Soil	MNTRTSSKLAAFAIALMMNGFIIGGVAYLFDAQTQQHSSLLSLAKQIATFQRLI
Ga0193752_11606192	3300020027	Soil	MNTKISAKLAALAIALMMNGLIIGGVAYLFDAQTQPHLTVLSFAKQLAQFQWVI
Ga0193753_100162072	3300020034	Soil	MNTRISAKLAALAIALMMNGLIIGGVAYLFDAQTQPHLTVLSFAKQLAQFQWVI
Ga0193753_101749441	3300020034	Soil	MNTRISAKLTALAIALMMNGFIIGGVAYLFDAQTQQHLSAISIAKQLASFQWLI
Ga0193753_102401412	3300020034	Soil	MTTRTSSKLAAFAIALMMNGFIIGGVAYLFDAQTQQHSSLLSLAKQIATFQWLI
Ga0193753_103174892	3300020034	Soil	MNTRTSSKLAAFAIALMMNTFIIGGVAYLFDAQTQQHSSLISLAKRIATFQWLI
Ga0193717_10454822	3300020060	Soil	MNTRISSKLAAFAIALMMNSFIIGGVAYLFDAQTQQHSSLLSLAKQIATFQWLI
Ga0193717_11081262	3300020060	Soil	MNTRTSSKLAAFAIALMMNSFIIGGVAYLFDAQTQQHSSLLSLAKQIAMFQWLI
Ga0193716_11068472	3300020061	Soil	MTTRTSSKLAAFAIALMVNGFIIGGVAYLFDAQTQQHSSPLSLAKQIATFQRLI
Ga0179592_1000006019	3300020199	Vadose Zone Soil	MNTRTSSKLAAFAIAVMMNGFIIGGVAYLFDAQTQGHSSLISLAKQIATFQWLI
Ga0210407_1000152118	3300020579	Soil	MNTRTSAKLAAFAIALMMNGFIIGGVAYLFDAQTQQHSSLLSLAKQIATFQWLI
Ga0210407_101486542	3300020579	Soil	MNTRITSKLAALALALMMNSVIIGGVAYLFDVQTQQHSSVISFAKRLATFQWLI
Ga0210407_109666872	3300020579	Soil	MNTRISSKLAALAIALLMNSVIIGGVAYLFDAQTQQHVSVISFAKRLAAFQWLI
Ga0210403_101158012	3300020580	Soil	MNTRISSKLAALAIALLMNSVIIGGVAYLFDAQTQQHLTVISFAKRFAAFQWLI
Ga0210403_102947612	3300020580	Soil	MNTRISSKLAAFAIALMMNGVIIGGVAYLFDAQTQQHLSVISFAKRLAAFQWLI
Ga0210403_109592081	3300020580	Soil	MNTRTSAKLAAFAIALMMNGFIIGGVAYLFDSQTQQHSSLLSLAKQIATFQWLI
Ga0210399_109677942	3300020581	Soil	MNTRISSKLAALAIALLMNGVIIGGVAYLFDAQTQQHVSVISFAKRLAAFQWLI
Ga0210395_104519862	3300020582	Soil	MNTRISSKLAALAIALMMNGFIIGGVAFLFDAQTQQHLSVISFAKQLAAFQWLI
Ga0210395_113666112	3300020582	Soil	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATFQWLI
Ga0210395_113879812	3300020582	Soil	MNTRITSKLAALALALMMNSVIIGGVAYLFDAQTQQHVSVISFAKRLAAFQWLI
Ga0210401_100057139	3300020583	Soil	MNTRIYSKLAAFAIALMMNSVIIGGVAYLFDAQTQQHVSVISFAKRLAAFQWLI
Ga0210404_104376402	3300021088	Soil	ETFMNTRIYSKLAAFAIALMMNSVIIGGVAYLFDAQTQQHVSVISFAKRLAAFQWLI
Ga0210406_100073802	3300021168	Soil	MNTRISSKLAALAIALLMNSVIIGGVAYLFDTQTQQHVSVISFAKRLAAFSWLI
Ga0210406_101878052	3300021168	Soil	MNTRTSSKLAAFAIALMMNSFIFGGVAYLFDAQTQQHAALISLAKQIATFRWLI
Ga0210406_102225222	3300021168	Soil	MNTRIYSKLAAFAIALMMNSVIIGGVAYLFDAQTQQHVSVMSFAKRLAAFQWLI
Ga0210406_107868602	3300021168	Soil	MTTGISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSIISFAKQLAAFQWLI
Ga0210400_108368821	3300021170	Soil	MNSRISSKLAALAFALMMNSVIIGGVAYVFDAQTQQHLSVISFAKRLAAFQWLI
Ga0210393_100275883	3300021401	Soil	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATLQWLI
Ga0210393_106178642	3300021401	Soil	MNTRTSSKLAAFAIALMMNSFIFGGVAYLFDAQTQQHSALISLAKQIATFRWLI
Ga0210393_116294362	3300021401	Soil	MNTRISSKLAALAIALMMNGFIIGGVAYLFDIQTQQHLTVISFAKQLAAFQWLI
Ga0210397_100220432	3300021403	Soil	MNTRTSSKLAALAIALMMNSLIMGGVAYLFDAQTHQFVAAPSFAKQMAAFKWVI
Ga0210389_100608402	3300021404	Soil	MNTRISAKLAALAIALMMNSVIIGGIAYLFDAQTQQHLSVFTFAKQMAAFQWVI
Ga0210389_101777392	3300021404	Soil	MNTRISAKFAALAIALMMNGFIIGGVAYLFDAQTRQHLSAISFAKHLVAFQWLI
Ga0210389_106562182	3300021404	Soil	MNTRISSKLAALAIALLMNCVIIGGVAYLFDAQTQQHLTVISFAKRFAAFQWLI
Ga0210389_106895432	3300021404	Soil	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISLAKQLATFQWLI
Ga0210389_112775571	3300021404	Soil	SSKLAAFAIALMMNSFIFGGVAYLFDAQTQQHAALISLAKQIATFRWLI
Ga0210387_1000008063	3300021405	Soil	MTTRISAKFAALAIALMMNGFIIGGVAYLFDAQTQPHLSVISFAKQLAAFQWLI
Ga0210387_100196424	3300021405	Soil	MTTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLAAFQWLI
Ga0210384_111543051	3300021432	Soil	MNTRISSKLAALAIALMMNSVIIGGVAYLFDAQTQQHVSMISFAKRLAAFQWLI
Ga0210391_108220661	3300021433	Soil	MNTRISSKLAALAIALMMNGLILGGVAYLFDVQTQQHVAVISFAKQLAAFQWLI
Ga0210392_100148542	3300021475	Soil	MTTRISAKLAALAIALMMNSMIIGGVAYLFDAQSQPHLSVSSFAKQIAQFQWLI
Ga0210392_102585341	3300021475	Soil	MNTRTSSKLAALAIALMMNSLIMGGVAYLFDAQTHQLVSAPSFAKQMAAFKWVI
Ga0210392_102902742	3300021475	Soil	MNTRISTKLAAIALALTMNGLIIGGVAYLFDVQVHQHLSVMSFAKQLAAFQWLI
Ga0210392_110459501	3300021475	Soil	RTAILQETIMNTRTSAKLAAFAIALMMNGFIIGGVAYLFDAQTQQHSSLLSLAKQIATFQWLI
Ga0210402_100055569	3300021478	Soil	MNTRISSKLAALAIALMMNSFIIGGVAYLFDAQTQQHLAAFSIAKRLAAIQWLI
Ga0242654_100969831	3300022726	Soil	MNTRTSAKLAAFAIALMMNGFIIGGVAYLFDAQTQQHSSLLSLAKQIA
Ga0224561_10029501	3300023030	Soil	MNTRISTKLAALAIALMMNGFIIGGVAFLFDAQTQQHLSVISFAKQLAAFQWLI
Ga0224547_10000449	3300023255	Soil	MNTRTSSKLAAFAIALMMNSFIFGGVAYLFDAQTQQHSALISLAKQIATFQWLI
Ga0247691_10031502	3300024222	Soil	MNTRISSKFAAFAIALMMNSFIMGGVAYLFDAQTQQHSSLLSLAKQIATFQWLI
Ga0208193_10920781	3300025463	Peatland	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAHTQQHLSVISFAKQLATFQWLI
Ga0208078_10485171	3300025544	Arctic Peat Soil	MNTRISSKLAALAIALMMNGFIIGGVAYLFDAQTQQNLSVISFAKQRAAFQWLI
Ga0208220_10666292	3300025627	Arctic Peat Soil	MNTRISAKLAALAVALMMNGFIIGGVAYLFDVQTHQNLSVISFAKQLAAFQWLI
Ga0208480_10301162	3300025633	Arctic Peat Soil	MKASISSKLAALAIALMMNGFILGGVAYLFDLQTHQNLSVISLAKQLVAFQWLI
Ga0208849_11573141	3300025664	Arctic Peat Soil	MNTRISAKLAALAVALMMNGFIIGGVAYLFDVQTHQNLSVISFAKQ
Ga0209863_101417192	3300026281	Prmafrost Soil	MNTRISSKLAALAIALMMNSFIIGGVAYLFDAQTQQHLSAVSIAKRLAAFQWLI
Ga0209890_101294112	3300026291	Soil	RISTKLAALAIALMMNSMLFGGVAYLFDTQAHQHSSLMALVKQIATFQGLI
Ga0209240_11954862	3300026304	Grasslands Soil	MNTRISSKLAALAIALLMNSVIIGGVAYLFDAQTQQHLTVISFAKRLAAFQWLI
Ga0257146_10513142	3300026374	Soil	MNTRTSSKLAAFAIALMMNGFIIGGVAYLFDAQTQGHSSLISLAKQIATFQWLI
Ga0257154_10809902	3300026467	Soil	MNTRISSKLAALAIALMMNSVIIGGVACLFDAQTQQHLTVISFAKRLAAFQWLI
Ga0179587_103314751	3300026557	Vadose Zone Soil	MNTRISSKLAAFAVALMMNSVIIGGVAYLFDAQAQQHLSVISFAKRLAAFQWLI
Ga0179587_103511271	3300026557	Vadose Zone Soil	MNTRISSKLAALAIALAMNGFVLGGVACLFDAQSRPHASLISLAKQITSCRWLI
Ga0179587_108066771	3300026557	Vadose Zone Soil	MNTRTSSKLAAFAIALMMNGFIIGGVAYLFDAQTQQHSSLFSLAKQLAKFQWLI
Ga0179587_109276461	3300026557	Vadose Zone Soil	MNTKISAKLAALAIALMMNTLIIGGVAYLFDAQTQPHLTLLSFAKQLAQFQWLI
Ga0209110_10099332	3300027002	Forest Soil	MNTRISSKLAALAIALMMNSVIIGGVAYLFDAQTQQHLSVFTFAKQMAAFQWVI
Ga0208240_10010742	3300027030	Forest Soil	MNTRISSKLAALAIALMMNGFIIGGVAYLFDIQTQQHLTVVSFAKQLAAFQWLI
Ga0209732_10087812	3300027117	Forest Soil	MNTRISSKLAALAIALMMNGFIIGGVAYLFEAQTQQHPSVISFAKQLATFQWLI
Ga0208992_10351791	3300027176	Forest Soil	SSKLAALAIALMMNSLIFGGVAVLFNAQSSQHASLISLAMQIARFQWLI
Ga0208987_10035812	3300027496	Forest Soil	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHSTIISFAKQLAAFQWLI
Ga0209524_11046882	3300027521	Forest Soil	MNTSISSKLAALATALMMNGLLFGGVAYLFDAQTQPHWSLISLAKQIIAIQSLI
Ga0209115_10707352	3300027567	Forest Soil	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLTTLPWLI
Ga0208982_10315851	3300027574	Forest Soil	MNTRTSSKLAALAIALMMNSLIFGGVAVLFNAQSSQHASLISLAMQIARFQWLI
Ga0209420_11350361	3300027648	Forest Soil	MNTRISTKLAALATALMMNGLIIGGVAYLFDAQTQQHLSVISFAKQLATFQWLI
Ga0209007_10037041	3300027652	Forest Soil	IMNTRISAKLAALAIALMMNGFIIGGVAYLFDAHTQQHLSVISFAKQLATFQWLI
Ga0209626_10338471	3300027684	Forest Soil	EKTATLQETIMNTRTSSKLAAFAIALMMNSFIFGGVAYLFDAQTQQHSALISLAKQIATFRWLI
Ga0209772_102737021	3300027768	Bog Forest Soil	MDTRISSKLAALAIALMMNSVIIGGVAYLFDAQTQQHLSVVFAKQMATFQWVI
Ga0209060_104363292	3300027826	Surface Soil	MNTRISSKLAALAIALMMNSLIIGGVAYLFDAQTQPHLSMLTFARQMAAFQWVI
Ga0209580_106984532	3300027842	Surface Soil	MTTRISSKLAALAIALMLNGFIFGGVAYLFDAQTQQHLTVVSLAKQPAVFQWLI
Ga0209693_104221582	3300027855	Soil	MNTRISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHLPLISFAKQLAAFEGLI
Ga0209693_104704541	3300027855	Soil	MNTRISSKLAALAVALMMNTVIIGGVAYLFDMQTQQHLSVISFAKQLATFQWLI
Ga0209169_104603572	3300027879	Soil	MTTRISAKLAALAIALMMNTLIIGGVAYLFEAQTHEHTSFFSMAKHIAKFQRLI
Ga0209169_106848082	3300027879	Soil	MNTRISSKLAALAIALMMNSFIIGGVAYLFDAQAQQHVSVFTFAKQMAAFQWVI
Ga0209624_102512841	3300027895	Forest Soil	MNTRISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHVSLISFAKQLAAFQWLI
Ga0265354_10009432	3300028016	Rhizosphere	MNTRISSKLAALAIALMMNGFIIGGVAYLFDVQTQQHLTVISFAKQLAAFQWLI
Ga0265357_10064372	3300028023	Rhizosphere	MNTRISSKLAALAIALMMNGFIIGGVAFLFDAQTEQHLSVISFAKQLAAFQWLI
Ga0209526_101171452	3300028047	Forest Soil	MNTSISSKLAALATALMMNGLLFGGVAYLFDAQTQPHWSLISLAKQIVAIQSLI
Ga0302220_103551861	3300028742	Palsa	MNTRISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHLSLTSFAKQLAAFQWLI
Ga0302231_104858202	3300028775	Palsa	MNTRISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHLSLTSFAKQL
Ga0308309_104644672	3300028906	Soil	MNTRISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHLSLISFAKQLAAFQWLI
Ga0311369_109504741	3300029910	Palsa	ISAKLAALAIALMMNGFIMGGVAYLFDVQTQQHLSLTSFAKQLAAFQWLI
Ga0265460_116428421	3300030740	Soil	TFQETIMDTRISSKLGALALALMMNGFIIGGVAYLFDAQNQQHSSVISFAKQLAAFQWLI
Ga0265721_10048841	3300030977	Soil	MNTRISTKLAAIALALTMNGFIIGGVAYLFDAQVHQQLSLMSFAKQLAAFQWLI
Ga0265773_10426911	3300031018	Soil	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATFQWL
Ga0170834_1049716531	3300031057	Forest Soil	MNTRISAKLAALAVALTMNGLIIGGVAYLFDAQTQAHLTVLSFAKQLAQFQWLI
Ga0170834_1057961422	3300031057	Forest Soil	MDTRISSKLAALAIALMMNGVIIGGVAYLFDAQTQQHLTVISFAKRLAAFQWLI
Ga0170834_1071282661	3300031057	Forest Soil	TIMNTRISAKLAALALALMMNGFIIGGVAFLFDAQTQQHLSVISFAKQLATFQWLI
Ga0170834_1115423022	3300031057	Forest Soil	MNTRISSKLAAFAVALMMNSVIIGGVAYLFDAQTQQHLSVISFAKRVAAFQWLI
Ga0170824_1033648382	3300031231	Forest Soil	MNTKISAKLGALAIALMMNTLIIGGVAYLFDAQTQPHLTVLSFARQLAQFQWLI
Ga0170824_1143923212	3300031231	Forest Soil	MNTKISAKLAALAIALMMNTLIIGGVAYLFDAQTQPHLTVLSFAKQLAQFQWLI
Ga0170824_1160657652	3300031231	Forest Soil	MNTKISAKLAALAIALMMNTLIIGGVAYLFDAQTQPHLSVLSFAKQLAQFQWLI
Ga0170820_130063901	3300031446	Forest Soil	MNTKISAKLAALAIALMMNTLIIGGVACLFDAQTQPHLTVLSFAKQLAQFQWLI
Ga0307508_102178962	3300031616	Ectomycorrhiza	MNTRISAKLAALAIALMMNGLIIGGVAYLFDAQTQPHLTVLSFAKQLAQFQWLI
Ga0310686_1050540825	3300031708	Soil	MNTRISSKLAALAIALMMNGFIIGGVAYLFDMQTQQHLSVISFAKQLAAFQWLI
Ga0310686_1126984802	3300031708	Soil	MNTRISSKLAAFAIALMMNSFIIGGVAYLFDAQTQQHLSVISFANQLAAFRWLV
Ga0310686_1133161862	3300031708	Soil	MNTRISTKLTALAVALMMNGFILGGVAYLFDAHAPQHLSMISLAKQVATYRWLM
Ga0310686_1153652883	3300031708	Soil	MNTPISAKLYALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATFQWLI
Ga0310686_1177581002	3300031708	Soil	MNTRISSKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATFQWLI
Ga0307476_113236281	3300031715	Hardwood Forest Soil	MNTRISAKFAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLAAFQWLI
Ga0307474_100085465	3300031718	Hardwood Forest Soil	MTTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSMISFAKQFAAFQWLI
Ga0307474_100548672	3300031718	Hardwood Forest Soil	MNTRISSKLAALAIALMMNGFIIGGVAYLFDAQTQQHPSVISFAKQLATFQWLI
Ga0307475_107385491	3300031754	Hardwood Forest Soil	MNTRIYSKLAAFAIALMMNSVIIGGVAYLFDAQTQQHVSVISFAKRL
Ga0307471_1005774032	3300032180	Hardwood Forest Soil	MNTRISSKLAALAVALMMNSVIIGGVAYLFDAQTQEHSSVISFAKRLAAFQWLI
Ga0316212_10732041	3300033547	Roots	MNTRISAKLAALAIALMMNGFIIGGVAYLFDAQTQQHLSVISFAKQLATFQW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040201

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences