Metagenome / Metatranscriptome Family F040200

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040200
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	69 residues
Representative Sequence	RMTVGLVIVRLCTTIPHVGGWVKFAAILWGIGAISLALYRRFQPVIAPGVPSAPYAPPMPPNTTVGGALPA
Number of Associated Samples	114
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.31 %
% of genes near scaffold ends (potentially truncated)	90.74 %
% of genes from short scaffolds (< 2000 bps)	74.69 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.975 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (51.235 % of family members)
Environment Ontology (ENVO)	Unclassified (50.617 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.938 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 0.00% Coil/Unstructured: 63.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF14321	DUF4382	8.64
PF00270	DEAD	5.56
PF06733	DEAD_2	1.23
PF13307	Helicase_C_2	1.23
PF01609	DDE_Tnp_1	1.23
PF04519	Bactofilin	1.23
PF13620	CarboxypepD_reg	0.62
PF15780	ASH	0.62
PF13592	HTH_33	0.62
PF13415	Kelch_3	0.62
PF02979	NHase_alpha	0.62
PF13471	Transglut_core3	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG1199	Rad3-related DNA helicase DinG	Replication, recombination and repair [L]	2.47
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.23
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.23
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.23
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.23
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.23
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.23
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.23

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.98 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.98 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.98 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.04 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.83 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.83 %
Unclassified	root	N/A	8.02 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11655824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300002917\|JGI25616J43925_10242826	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300004080\|Ga0062385_10232319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300004479\|Ga0062595_102504220	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005174\|Ga0066680_10175531	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300005175\|Ga0066673_10021616	All Organisms → cellular organisms → Bacteria	2976	Open in IMG/M
3300005178\|Ga0066688_10268520	All Organisms → cellular organisms → Bacteria → Acidobacteria	1095	Open in IMG/M
3300005450\|Ga0066682_10910581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300005540\|Ga0066697_10706451	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300005556\|Ga0066707_11021982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005568\|Ga0066703_10415894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300005575\|Ga0066702_10999626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005576\|Ga0066708_11056643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005587\|Ga0066654_10021946	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300005598\|Ga0066706_11142124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300006050\|Ga0075028_100060641	All Organisms → cellular organisms → Bacteria → Acidobacteria	1844	Open in IMG/M
3300006050\|Ga0075028_100395197	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300006176\|Ga0070765_100578129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300007255\|Ga0099791_10620193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300007258\|Ga0099793_10679234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300007265\|Ga0099794_10539379	Not Available	616	Open in IMG/M
3300007265\|Ga0099794_10796327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300009038\|Ga0099829_10082899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2460	Open in IMG/M
3300009088\|Ga0099830_10026868	All Organisms → cellular organisms → Bacteria → Acidobacteria	3834	Open in IMG/M
3300009088\|Ga0099830_10495375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300009088\|Ga0099830_10563418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300009088\|Ga0099830_10767179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300009089\|Ga0099828_10080636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2776	Open in IMG/M
3300009089\|Ga0099828_10112223	All Organisms → cellular organisms → Bacteria → Acidobacteria	2372	Open in IMG/M
3300009089\|Ga0099828_10418113	All Organisms → cellular organisms → Bacteria → Acidobacteria	1209	Open in IMG/M
3300009090\|Ga0099827_10465909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300009090\|Ga0099827_10487151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300010048\|Ga0126373_10300691	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300010159\|Ga0099796_10252607	Not Available	733	Open in IMG/M
3300010301\|Ga0134070_10000265	All Organisms → cellular organisms → Bacteria	15656	Open in IMG/M
3300010304\|Ga0134088_10726120	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300010321\|Ga0134067_10069531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300010360\|Ga0126372_13148682	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300011269\|Ga0137392_10435362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300011269\|Ga0137392_10493374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300011270\|Ga0137391_10135318	All Organisms → cellular organisms → Bacteria → Acidobacteria	2144	Open in IMG/M
3300011270\|Ga0137391_11229373	Not Available	597	Open in IMG/M
3300011271\|Ga0137393_10086904	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300011271\|Ga0137393_10137289	All Organisms → cellular organisms → Bacteria → Acidobacteria	2031	Open in IMG/M
3300011271\|Ga0137393_10246187	All Organisms → cellular organisms → Bacteria → Acidobacteria	1517	Open in IMG/M
3300011271\|Ga0137393_10620482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300012096\|Ga0137389_10074503	All Organisms → cellular organisms → Bacteria → Acidobacteria	2635	Open in IMG/M
3300012096\|Ga0137389_10094408	All Organisms → cellular organisms → Bacteria → Acidobacteria	2364	Open in IMG/M
3300012096\|Ga0137389_10691839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300012189\|Ga0137388_10044395	All Organisms → cellular organisms → Bacteria → Acidobacteria	3564	Open in IMG/M
3300012189\|Ga0137388_10935324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300012189\|Ga0137388_11369916	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300012200\|Ga0137382_10459146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300012200\|Ga0137382_10503812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300012202\|Ga0137363_10013937	All Organisms → cellular organisms → Bacteria	5230	Open in IMG/M
3300012202\|Ga0137363_10089100	All Organisms → cellular organisms → Bacteria → Acidobacteria	2318	Open in IMG/M
3300012202\|Ga0137363_10224472	All Organisms → cellular organisms → Bacteria → Acidobacteria	1518	Open in IMG/M
3300012202\|Ga0137363_11545081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012203\|Ga0137399_10187847	All Organisms → cellular organisms → Bacteria → Acidobacteria	1671	Open in IMG/M
3300012203\|Ga0137399_10839569	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300012203\|Ga0137399_11170890	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300012207\|Ga0137381_10333331	All Organisms → cellular organisms → Bacteria → Acidobacteria	1322	Open in IMG/M
3300012208\|Ga0137376_11469889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300012357\|Ga0137384_10247739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1487	Open in IMG/M
3300012362\|Ga0137361_10060314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3171	Open in IMG/M
3300012362\|Ga0137361_10278392	All Organisms → cellular organisms → Bacteria → Acidobacteria	1529	Open in IMG/M
3300012582\|Ga0137358_10679195	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300012683\|Ga0137398_10016078	All Organisms → cellular organisms → Bacteria → Acidobacteria	3945	Open in IMG/M
3300012683\|Ga0137398_10233410	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221	Open in IMG/M
3300012685\|Ga0137397_10047369	All Organisms → cellular organisms → Bacteria → Acidobacteria	3081	Open in IMG/M
3300012685\|Ga0137397_10256384	All Organisms → cellular organisms → Bacteria → Acidobacteria	1303	Open in IMG/M
3300012685\|Ga0137397_10292923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300012917\|Ga0137395_10344930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300012918\|Ga0137396_10038778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3206	Open in IMG/M
3300012918\|Ga0137396_10383984	All Organisms → cellular organisms → Bacteria → Acidobacteria	1041	Open in IMG/M
3300012918\|Ga0137396_10450275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300012922\|Ga0137394_10269704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300012925\|Ga0137419_10420391	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300012925\|Ga0137419_11159160	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300012925\|Ga0137419_11303749	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300012925\|Ga0137419_11563500	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300012927\|Ga0137416_10144923	All Organisms → cellular organisms → Bacteria → Acidobacteria	1851	Open in IMG/M
3300012927\|Ga0137416_10316866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300012927\|Ga0137416_11146268	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300012927\|Ga0137416_11389390	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300012927\|Ga0137416_11920671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300012927\|Ga0137416_12039220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300012929\|Ga0137404_10086372	All Organisms → cellular organisms → Bacteria → Acidobacteria	2499	Open in IMG/M
3300012929\|Ga0137404_11812824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300012930\|Ga0137407_10689780	All Organisms → cellular organisms → Bacteria → Acidobacteria	962	Open in IMG/M
3300012972\|Ga0134077_10573264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012975\|Ga0134110_10015835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2889	Open in IMG/M
3300012975\|Ga0134110_10623602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300014150\|Ga0134081_10409695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300014154\|Ga0134075_10010563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3555	Open in IMG/M
3300015053\|Ga0137405_1421735	All Organisms → cellular organisms → Bacteria → Acidobacteria	6155	Open in IMG/M
3300015054\|Ga0137420_1427663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300015264\|Ga0137403_10537510	All Organisms → cellular organisms → Bacteria → Acidobacteria	1037	Open in IMG/M
3300015357\|Ga0134072_10378076	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300015359\|Ga0134085_10289277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300017656\|Ga0134112_10069532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300017933\|Ga0187801_10144623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300018006\|Ga0187804_10030184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2035	Open in IMG/M
3300018060\|Ga0187765_10243371	All Organisms → cellular organisms → Bacteria → Acidobacteria	1057	Open in IMG/M
3300018086\|Ga0187769_10264866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1281	Open in IMG/M
3300018433\|Ga0066667_11886862	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300018468\|Ga0066662_10413413	All Organisms → cellular organisms → Bacteria → Acidobacteria	1191	Open in IMG/M
3300020140\|Ga0179590_1125624	Not Available	697	Open in IMG/M
3300020170\|Ga0179594_10059439	All Organisms → cellular organisms → Bacteria → Acidobacteria	1309	Open in IMG/M
3300020199\|Ga0179592_10357245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300020579\|Ga0210407_10577989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300021046\|Ga0215015_10542805	All Organisms → cellular organisms → Bacteria → Acidobacteria	2861	Open in IMG/M
3300021086\|Ga0179596_10431614	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300021088\|Ga0210404_10018930	All Organisms → cellular organisms → Bacteria → Acidobacteria	2937	Open in IMG/M
3300021088\|Ga0210404_10020380	All Organisms → cellular organisms → Bacteria → Acidobacteria	2844	Open in IMG/M
3300021168\|Ga0210406_10131514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2109	Open in IMG/M
3300021168\|Ga0210406_11035691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300021168\|Ga0210406_11168663	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300021170\|Ga0210400_11584468	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300021171\|Ga0210405_10185859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1647	Open in IMG/M
3300021171\|Ga0210405_10246063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1415	Open in IMG/M
3300021403\|Ga0210397_11022387	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300021407\|Ga0210383_10433740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300021476\|Ga0187846_10076778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1454	Open in IMG/M
3300024222\|Ga0247691_1048401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300025918\|Ga0207662_10939084	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300026285\|Ga0209438_1113936	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300026335\|Ga0209804_1320520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300026342\|Ga0209057_1213839	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300026361\|Ga0257176_1035753	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300026528\|Ga0209378_1019631	All Organisms → cellular organisms → Bacteria → Acidobacteria	3796	Open in IMG/M
3300026529\|Ga0209806_1289878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300026530\|Ga0209807_1309831	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300026552\|Ga0209577_10850989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300027643\|Ga0209076_1011829	All Organisms → cellular organisms → Bacteria → Acidobacteria	2252	Open in IMG/M
3300027674\|Ga0209118_1091806	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300027855\|Ga0209693_10241404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300027862\|Ga0209701_10048081	All Organisms → cellular organisms → Bacteria → Acidobacteria	2744	Open in IMG/M
3300027862\|Ga0209701_10162822	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300027875\|Ga0209283_10880484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300028536\|Ga0137415_10490102	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300028536\|Ga0137415_10765851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300029636\|Ga0222749_10282488	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300031668\|Ga0318542_10569278	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300031715\|Ga0307476_10230840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1348	Open in IMG/M
3300031753\|Ga0307477_10838040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300031820\|Ga0307473_10313894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300031962\|Ga0307479_10068833	All Organisms → cellular organisms → Bacteria → Acidobacteria	3415	Open in IMG/M
3300031962\|Ga0307479_10429527	All Organisms → cellular organisms → Bacteria → Acidobacteria	1305	Open in IMG/M
3300031962\|Ga0307479_11409108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300032010\|Ga0318569_10317834	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300032064\|Ga0318510_10427586	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300032174\|Ga0307470_10688406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.53%
Host-Associated	Host-Associated	2.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.44%
Aquatic	Environmental → Aquatic	3.09%
Plants	Host-Associated → Plants	2.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.47%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Sediment	Environmental → Aquatic → Sediment	1.23%
Cave	Environmental → Terrestrial → Cave	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.27%
Loam	Environmental → Terrestrial → Soil → Loam	4.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.23%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	51.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.23%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.23%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.23%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_116558241	3300000789	Soil	SELWPLIGRMAVGVVIVRLCTTIPVIGGWVKLAVIIWGLGAISIALYRRFQPVIAPGVPPGQFAPPLPPNTTIGGVQPA*
JGI25616J43925_102428262	3300002917	Grasslands Soil	PHVGGWVKFAAILWGIGAISLALYRRFQPVIAPGVPSAPYAPPMPPNTTVGGALPA*
Ga0062385_102323191	3300004080	Bog Forest Soil	GPAREIWPLIGRMAVGVVIVRLCTTVPHIGGWVKFGVMLWGTGAISLALYRRFQPAISAGIPGAPIVPAPLPPNTTVGGAVPA*
Ga0062595_1025042201	3300004479	Soil	RTRELWPLIGRMAVGIAIVRLATTIPELGGWIKFGTILWGVGAISLAIYRRFQPSISAGSPVGIASPLPPNTTIGGAQPA*
Ga0066680_101755312	3300005174	Soil	RMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA*
Ga0066673_100216163	3300005175	Soil	TSELWPLIGRMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVSGPLPA*
Ga0066688_102685202	3300005178	Soil	TTIPEVGGWVKFVAILWGVGAISLAIFRRFQPALAAGGAPTAPAVQPLPPNTTIGGPLPA
Ga0070687_1013373392	3300005343	Switchgrass Rhizosphere	IAIVRLATTIPELGGWIKFGTILWGVGAISLAIYRRFQPSISAGSPVGIASPLPPNTTIGGAQPA*
Ga0070667_1006371552	3300005367	Switchgrass Rhizosphere	ATTIPELGGWIKFGTILWGVGAISLAIYRRFQPSISAGSPVGIASPLPPNTTIGGAQPA*
Ga0066682_109105812	3300005450	Soil	IVRLCTTIPHVGGWVKFVAILWGIGAMSLAIYRRFQPVLATGAPSAPAVQPLPPNTTIGGPLPA*
Ga0070662_1008649741	3300005457	Corn Rhizosphere	AIVRLATTIPELGGWIKFGTILWGVGAISLAIYRRFQPSISAGSPVGIASPLPPNTTIGGAQPA*
Ga0066697_107064511	3300005540	Soil	VVIVRVCTTIPDVGGWVKFVAILWGIGAISLAIFRRFQPVPATGVMIPPGAQPLPPTTTVGGPLPA*
Ga0066707_110219822	3300005556	Soil	LWPLIGRMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGALSLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA*
Ga0066703_104158941	3300005568	Soil	TSELWPLIGRMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA*
Ga0066702_109996261	3300005575	Soil	VGWVFKYGAAFWGIGAISLVVYRRFQPVIAPNVPSAPYSPPMPPNTTVGGPLPA*
Ga0066708_110566431	3300005576	Soil	SELWPLIGRMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGALSLAVYRRFQPVIAPNMPSAPYTPPIPPNTTLGGPLPA*
Ga0066654_100219462	3300005587	Soil	AVGVVIVRVCTTIPDVGGWVKFVAILWGIGAISLAIFRRFQPVPATGVMIPPGAQPLPPTTTVGGPLPA*
Ga0066706_111421242	3300005598	Soil	LCTTIPHVGGWVKFAAILWGIGAISLTFYRRFQPVIAPSVPSAPYAPPMPPNTTVGGALPA*
Ga0075028_1000606411	3300006050	Watersheds	IPHVGGWVKLAAILWGIGAISLALYRRFQPMIAPSVPTGPYTPPMPPNTTVGGALPA*
Ga0075028_1003951971	3300006050	Watersheds	VGVLIVRLCTTIPHIGGWVKYGAAFWGIGAISLAIYRRFQPAITPGMPSAPYTPPLPPNTTVGGVPA*
Ga0070765_1005781292	3300006176	Soil	WPLIGRMAVGVVIVRLCTTLPHVGGWVKFGVMLWGTGAISLALYRRFQPAISAGLPGAPSVPTPLPPNTTIGGAVPA*
Ga0075425_1011216491	3300006854	Populus Rhizosphere	RMIMGIAIVRLATTIPELGGWIKLGTILWGVGAISLALYRRFQPSISAGVPVGGYVAPPLPPNTTIGGAQPA*
Ga0099791_106201932	3300007255	Vadose Zone Soil	RMAVGVVIVRLSTTIPVIGGWVKLGVIIWGMGAISIALYRRFQPVIAPGVPPAQFTPPLPPNTTVGGVQPA*
Ga0099793_106792342	3300007258	Vadose Zone Soil	TSELWPLIGRMAVGLVIVRLCTTIPHLGGWVKFAAMLWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGALPA*
Ga0099794_105393792	3300007265	Vadose Zone Soil	LATVVPILGGWVKFGVMLWGLGAISLALYNRFQPTIAANAPSAPYMPPPLPPNTTVGGMQPA*
Ga0099794_107963272	3300007265	Vadose Zone Soil	VRLCTTIPVIGGWVKLGVIIWGLGAISIALYRRFQPVIAPGVPPGQFAPPLPPNTTVGGVQPA*
Ga0099829_100828994	3300009038	Vadose Zone Soil	GLVIVRLATVIPEAGGWIKFGVILWGLGAISLALYNRFQPTLAANAPSAPYTPPLPPNTTVGGMQPA*
Ga0099830_100268683	3300009088	Vadose Zone Soil	LRLCTMISHAGTWVKYVAAFWGVGAISLALYRRFQPVIAPGGPSAPYTPPLPPNTTVGGALSA*
Ga0099830_104953751	3300009088	Vadose Zone Soil	TTIPHLGGWVKLAAILWGIGAISLALYRRFQPVIAPSVPSAPYSPPMPQNTTVGGVPA*
Ga0099830_105634181	3300009088	Vadose Zone Soil	IPHIGGWVKLAAILWGVGALSLALYRRFQPVIAPGAPSAPFAPPLPPNTTVGGPLPA*
Ga0099830_107671791	3300009088	Vadose Zone Soil	CTTIPHVGGWVKFAAILWGIGAISLALYRRFQPVIAPGVPSAPTTPLPPSTTVGGPLPA*
Ga0099828_100806361	3300009089	Vadose Zone Soil	IGRMAVGLVIVRLCTIIPHVGGWVKFAAILWGIGAISLTLYRRFQPVIAPGVPSAPHTPPLPPNTTVGGALPA*
Ga0099828_101122231	3300009089	Vadose Zone Soil	IGRMAVGLVIVRLCTIIPHVGGWVKFAAILWGIGAISLTLYRRFQPVIAPGVPSGPHTPPLPPNTTVGGALPA*
Ga0099828_104181132	3300009089	Vadose Zone Soil	RMTVGLVIVRLCTTIPHVGGWVKFAAILWGIGAISLALYRRFQPVIAPGVPSAPYAPPMPPNTTVGGALPA*
Ga0099827_104659093	3300009090	Vadose Zone Soil	RLATVIPEAGGWIKFGVILWGLGAISLALYNRFQPTLAANTPSAPYTPPLPPNTTVGGMQPA*
Ga0099827_104871512	3300009090	Vadose Zone Soil	LIGRMAVGLVILRLGTTIPHVGGWVKLAAILWGIGAISLALYRRFQPVIAPGAPSAPYTPPIPPNTTVGGALLA*
Ga0126373_103006911	3300010048	Tropical Forest Soil	EFWPVVGRMVVGVVIVRVCTTIPDVGVWVKFVAILWGIGAISLAVFRRFQPVPATGVTVPPGAQPLPPNTTVGGPLPA*
Ga0099796_102526072	3300010159	Vadose Zone Soil	WVFKYGAAFWGIGAISLVVYRRFQPLIAPSVPSAPYSPPMPPNTTVGGAVPA*
Ga0134070_1000026515	3300010301	Grasslands Soil	IPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA*
Ga0134088_107261201	3300010304	Grasslands Soil	MAVGVVIVRVCTTIPDVGGWVKFVAILWGIGAISLAIFRRFQPVPATGVMIPPGAQPLPPTTTVGGPLPA*
Ga0134067_100695312	3300010321	Grasslands Soil	VGVVIVRVCTTIPDVGGWVKFVAILWGIGAISLAIFRRFQPVPATGVMIPPGAQPLPPTTTVGGPLPA*
Ga0126372_131486822	3300010360	Tropical Forest Soil	MAVGVVIVRLLTTIPHLGGWVKFVAILWGIGAIALAIYRRFHPILATGAAGPVSQPMPPNTTVGGPLPA*
Ga0137392_104353622	3300011269	Vadose Zone Soil	VLLRLCTTIPHIGGWVKLAAILWGIGAISLALYRRFQPVIAPGIPSAPYSPPIPPNTTVGGALPA*
Ga0137392_104933741	3300011269	Vadose Zone Soil	TSELWPLIGRMAVGLVILRLCTTIPHLGGWVKFAAMLWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGALPA*
Ga0137391_101353182	3300011270	Vadose Zone Soil	WVKLAAILWGIGAISLALYRRFQPMIAPGAPTAPYTPPIPPNTTVGGALPA*
Ga0137391_112293732	3300011270	Vadose Zone Soil	TEETWPLIGRMAVGIVIVRLATVVPIIGGWVKFGLMLWGLGAISLALYNRFQPTIAASAPSGPYMPPPLPPNTTVGGMQPA*
Ga0137393_100869044	3300011271	Vadose Zone Soil	GGWVKLAAILWGIGAISLALYRRFQPVLAPSVPSAPYSPPMPPNTTVGGALPA*
Ga0137393_101372891	3300011271	Vadose Zone Soil	GRMAVGLVIVRLATVIPGVGGWIKFGVILWGLGAISLALYDRFQPTLAANTPSAPYTPPLPPNTTVGGMQPA*
Ga0137393_102461872	3300011271	Vadose Zone Soil	PHVGWVFKYGAAFWGIGAISLVVYRRFQPVIAPSVPSAPYSPPMPPNTTVGGAVPA*
Ga0137393_106204822	3300011271	Vadose Zone Soil	ETWPLIGRMAVGIVIVRLATVVPILGGWVKFGVMLWGLGAISLALYNRFQPTIAAGAPSAPYMPPPLPPNTTVGGMQPA*
Ga0137389_100745032	3300012096	Vadose Zone Soil	AVGLVIVRLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPGAPNAPYSPPMPPNTTVGGAVPA*
Ga0137389_100944083	3300012096	Vadose Zone Soil	MAVGLVIVRLATVIPGVGGWIKFGVILWGLGAISLALYDRFQPTLAANTPSAPYTPPLPPNTTVGGMQPA*
Ga0137389_106918391	3300012096	Vadose Zone Soil	MAVGVVIVRLCTTIPVIGGWVKLGVIIWGLGAISIALYRRFQPVIAPGVPPGQFAPPLPPNTTVGGVQPA*
Ga0137388_100443951	3300012189	Vadose Zone Soil	AVGLVIVRLATVIPGVGGWIKFGVILWGLGAISLALYDRFQPTLAANSPSAPYTPPLPPNTTVGGMQPA*
Ga0137388_109353242	3300012189	Vadose Zone Soil	GRMTVGLVILRLCTIIPHVGPWVKYGAAFWGIGAISLVVYRRFQPMIAPSMPSTPYSPPMPPNTTVGGALPA*
Ga0137388_113699161	3300012189	Vadose Zone Soil	LIGRMAVGIVIVRLATVIPIIGGWVKFGVMLWGLGAISLALYNRFQPTITASAPSGPYMPPPLPPNTTVGGMQPA*
Ga0137382_104591462	3300012200	Vadose Zone Soil	HAGGWVKFAAILWGIGAISLALYRRFQPVIAPNMPSAPYTPPNTTVGGALPA*
Ga0137382_105038121	3300012200	Vadose Zone Soil	LIGRMTVGLVILRLCTTIPHLGGWVKLAAILWGIGAISLALYRRFQPVIAPSVPSAPYSPPMPPNTTVGGVPA*
Ga0137363_100139371	3300012202	Vadose Zone Soil	TIIPHVGWVFKYGAAFWGIGAISLVVYRRFQPVIAPSVPSAPYSPPMPPNTTVGGAVPV*
Ga0137363_100891003	3300012202	Vadose Zone Soil	VRLCTTIPHVGGWVKFAAILWGIGAISLALYQRFQPVIAPSMPSAPYTPPIPPNTTVGGPLPA*
Ga0137363_102244721	3300012202	Vadose Zone Soil	IGRMTVGLVILRLCTIIPHVGPWVKYGAAFWGIGAISLVVYRRLQPMIAPSMPSTPYSAPMPPNTTVGGPLPA*
Ga0137363_115450811	3300012202	Vadose Zone Soil	FTIIPHVGWVFKYGAAFWGIGAISLVVYRRFQPVIAPSVPSAPYSPPMPPNTTVGGAVPA
Ga0137399_101878471	3300012203	Vadose Zone Soil	GRMVVGVVIVRLFTVIPHVGWLFKYGAALWGMGAISLVVYRRFQPVIAPGTPSVPYSPPMPPNTTVGGPLPA*
Ga0137399_108395691	3300012203	Vadose Zone Soil	IVRLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPGAPNAPYSPPMPPNTTVGGAVPA*
Ga0137399_111708902	3300012203	Vadose Zone Soil	LVIVRLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMISPGAPNAPYAPPMPPNTTVGGAVPA*
Ga0137381_103333312	3300012207	Vadose Zone Soil	SEFWPFVGRMAVGVVIVRLCTTIPHAGGWVKFIAIFWGIGAIALAIFRRFQPLLATGAPSAPSMQPLPPNTTIGGPLPA*
Ga0137376_114698892	3300012208	Vadose Zone Soil	MAVGVVIVRLCTTIPHVGGWVKFVAILWGIGAMSLAIYRRFQPVLATGAPSAPAVQPLPPNTTIGGPLPA*
Ga0137384_102477392	3300012357	Vadose Zone Soil	RTSELWPLIGRMAVGVVIVRLGTTIPHIGGWVKLAAILWGVGALSLALYRRFQPVIAPGAPSAPFTPPLPPNTTVGGPLPA*
Ga0137360_102151752	3300012361	Vadose Zone Soil	VVGVVILRLLTIIPHVGWVFKYGAALWGVGAISLVVYRRIQPMIAPGAPSAPYSPPIPPSTTLGGTVPA*
Ga0137361_100603141	3300012362	Vadose Zone Soil	VRLATVIPEAGGWIKFGVILWGLGAISLALYNRFQPTLAANAPSAPYTPPLPPNTTVGGMQPA*
Ga0137361_102783923	3300012362	Vadose Zone Soil	LCTTIPHVGGWVKFAAILWGIGAISLALYQRFQPVIAPSMPSAPYTPPIPPNTTVGGPLPA*
Ga0137358_101437402	3300012582	Vadose Zone Soil	KFAAILWGIGAISLSLYRRFEPVIAPSGPAAPYSPPMPPNTTVGGAVPA*
Ga0137358_106791951	3300012582	Vadose Zone Soil	GWVKFAAILWGIGAISLALYRRFQPMIAPSAPYSPPMPPNTTLGGAVPA*
Ga0137398_100160781	3300012683	Vadose Zone Soil	HAGGWVKFAAILWGIGAISLALYRRFQPMIAPNMPSAPYSPPMPPNTTVGGALPA*
Ga0137398_102334102	3300012683	Vadose Zone Soil	GGWVKFAAILWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGALPA*
Ga0137397_100473691	3300012685	Vadose Zone Soil	LIGRMAVGIVIVRLATVVPIIGGWVKFGVMLWGLGAISLALYNRFQPTLTASAPSGPYMPPPLPPNTTVGGMQPA*
Ga0137397_102563841	3300012685	Vadose Zone Soil	IPVIGGWVKLAVIIWGLGAISIALYRRFQPVILPGMAPGQFEQPLPPNTTVGGVQPA*
Ga0137397_102929231	3300012685	Vadose Zone Soil	TSQLWPLIGRMAVGVVIVRLCTTIPVIGGWVKLGVIIWGLGAISIALYRRFQPVIAPGVPPGQFAPPLPPNTTVGGVQPA*
Ga0137395_103449302	3300012917	Vadose Zone Soil	GIVIVRLATVVPILGWWVKFGVMLWGLGAISLALYNRFQPTLTASAPSGPYMPPPLPPNTTVGGMQPA*
Ga0137396_100387781	3300012918	Vadose Zone Soil	SELWPLIGRMTVGLVILRLCTTIPHLGGWVKLAAILWGIGAISLALYRRFQPVLAPSLPSAPYSPPMPPNTTVGGALPA*
Ga0137396_103839842	3300012918	Vadose Zone Soil	LCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPSAPYSPPMPPNTTLGGAVPA*
Ga0137396_104502752	3300012918	Vadose Zone Soil	GRTSELWPLIGRMAVGLVIVRLCTTIPHLGGWVKFAAMLWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGALPA*
Ga0137394_102697041	3300012922	Vadose Zone Soil	IGRMAVGVVIVRLCTTIPVIGGWVKLGVIIWGLGAISIALYRRFQPVIAPGVPPGQFAPPLPPNTTVGGVQPA*
Ga0137359_101730363	3300012923	Vadose Zone Soil	GGWVKFAVIVWGLGATSLALYNRFQPSIASTPSAPYAPPLPPNTTVGGMQPA*
Ga0137419_104203913	3300012925	Vadose Zone Soil	VRLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPGAPNAPYSPPMPPNTTVGGAVPA*
Ga0137419_111591602	3300012925	Vadose Zone Soil	VIVRLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMISPGAPNAPYAPPMPPNTTVGGAVPA*
Ga0137419_113037491	3300012925	Vadose Zone Soil	TIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPSAPYSPPMPPNTTLGGAVPA*
Ga0137419_115635002	3300012925	Vadose Zone Soil	HLGGWVKFAAMLWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGALPA*
Ga0137416_101449232	3300012927	Vadose Zone Soil	FTIIPHVGWLFKYGAAFWGMGAVSLVVYRRFQPVIAPGTPSVPYSPPMPPNTTVGGPLPA
Ga0137416_103168662	3300012927	Vadose Zone Soil	GRMAVGIVIVRLATVVPIIGGWVKFGVMLWGLGAISLALYSRFQPTLTASAPSGPYMPPPLPPNTTVGGMQPA*
Ga0137416_111462682	3300012927	Vadose Zone Soil	RLATVVPIIGGWVKFGVILWGLGAISLALYNRFQPTLTASAPSGPYMPPPLPPNTTVGGMQPA*
Ga0137416_113893902	3300012927	Vadose Zone Soil	LVILRLCTTIPHLGGWVKLAAILWGIGAISLALYRRFQPVITPSVPSAPYSPPMPPNTTVGGAVPA*
Ga0137416_119206711	3300012927	Vadose Zone Soil	RLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPSAPYSPPMPPNTTLGGAVPA*
Ga0137416_120392201	3300012927	Vadose Zone Soil	LVILRLCTTIPHLGGWVKLAAILWGIGAISLALYRRFQPVIAPSVPSAPYSPPMPPNTTVGGVPA*
Ga0137404_100863721	3300012929	Vadose Zone Soil	ILRLCTTIPHVGGWVKFAAILWGIGAISLALYRRFQPVIAPSMPSVPYSPPIPPNTTVGGPLPA*
Ga0137404_118128241	3300012929	Vadose Zone Soil	IPHVGGWVKFAAILWGIGAISLSLYRRFEPVIAPSGPAAPYSPPIPPNTTVGGAVPA*
Ga0137407_106897802	3300012930	Vadose Zone Soil	MAIGVLIIRAVALLPHGGWIKLIVLLWGIGAISLALYRRFQPVIAPSMPSVPYSPPIPPNTTVGGPLPA*
Ga0134077_105732641	3300012972	Grasslands Soil	TANEIAPMPQRMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA*
Ga0134110_100158351	3300012975	Grasslands Soil	TSELWPLIGRMAVGVVIVRLFTIIPHVGWVFKYGAAFWGIGAISLVVYRRFQPVIAPNVPSAPYSPPMPPNTTVGGPLPA*
Ga0134110_106236021	3300012975	Grasslands Soil	SELWPLIGRMTVGLVIVRLCTTIPHVGGWVKFAAILWGIGAISLTFYRRFQPVIAPSVPSAPYAPPMPPNTTVGGALPA*
Ga0134081_104096951	3300014150	Grasslands Soil	LWPLIGRMTVGLVIVRLCTTIPHLGGWVKFAAILWGIGAISLTFYRRFQPVIAPSVPSAPYAPPMPPNTTVGGALPA*
Ga0134075_100105633	3300014154	Grasslands Soil	GRTSELWPLIGRMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGALSLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA*
Ga0137405_14217358	3300015053	Vadose Zone Soil	MATVVPILGGWVKFGVMLWGLGAISLALYNRFQPSIAASAPSGPYMPPPLPPNTTVGGMQPA*
Ga0137420_14276632	3300015054	Vadose Zone Soil	PHVGGWVKFAAILWGIGAISLALYRRLQPVIAPSMPSVPYSPPIPPNTTVGGPLPA*
Ga0137403_105375102	3300015264	Vadose Zone Soil	AVGVVIVRLSTTIPVIGGWIKLGVIIWGLGAISIALYRRFHPVIAPGMPPGPSAQPLPPNTTVGGVQPA*
Ga0134072_103780761	3300015357	Grasslands Soil	GVVIVRVCTTIPDVGGWVKFVAILWGIGAISLAIFRRFQPVPATGVMIPPGAQPLPPTTTVGGPLPA*
Ga0134085_102892772	3300015359	Grasslands Soil	VGVVIVRLCTTIPHVGGWVKFVAILWGIGAMSLAIYRRFQPVLATGAPSAPAMQPLPPNTTIGGPLPA*
Ga0134112_100695321	3300017656	Grasslands Soil	TIPHVGGWVKFAAILWGIGALSLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA
Ga0187801_101446232	3300017933	Freshwater Sediment	RTSEAWPLIGRMVVGVVIVRLCTTIPHVGGWIKWAVAVWGLGAISIALYRRFQPMLAPNLPSAPYQTPMPPNTTVGGALPT
Ga0187804_100301841	3300018006	Freshwater Sediment	TSEAWPLIGRMVVGVVIVRLCTTIPHVGGWIKWAVAVWGLGAISITLYRRFQPMLAPNLPSAPYQTPMPPNTTVGGALPT
Ga0187765_102433711	3300018060	Tropical Peatland	AVGVVIVRLCTTIPAVGGWVKVAVILWGVGAISLALYRRFQPTIGAGTAGASPLPANTTVGGAQPA
Ga0187769_102648661	3300018086	Tropical Peatland	LVGRMAVGLVLVRLCTTIPHVGGWVKFAAILWGMGAISLAIYRRFQPVIAPGVPPAPYAQPMPPNTTVGGTLPA
Ga0066667_118868621	3300018433	Grasslands Soil	GRTRELWPLIGRMVVGIAIVRLATTIPELGGWIKFGTILWGLGAISLALYRRFQPSISAGVPVGGYVASPLPPNTTIGGAQPA
Ga0066662_104134131	3300018468	Grasslands Soil	RLCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA
Ga0179590_11256241	3300020140	Vadose Zone Soil	VGLVILRLGTTIPHLGGWVKLAAILWGIGAISLALYRRFQPVIAPSVPSAPYSPPMPPNTTVGGAVPA
Ga0179594_100594391	3300020170	Vadose Zone Soil	MAVGVVIVRLCTTIPVIGGWVKLGVIIWGLGAISIALYRRFQPVIAPGVPPGQFAPPLPPNTTVGGVQPA
Ga0179592_103572451	3300020199	Vadose Zone Soil	ELWPLIGRMAVGLVIVRLCTTIPHLGGWVKFAAMLWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGALPG
Ga0210407_105779892	3300020579	Soil	IVRLATVIPGVGGWIKFGVILWGLGAISLALYERFQPTLAANTPSAPYTPPLPPNTTVGGLQQPA
Ga0215015_105428053	3300021046	Soil	MAVGLVIVRLATVVPAVGGWVKFGVILWGLGAISLALYDRFQPTLAANTPSAPYTPPLPPNTTVGGMQPA
Ga0179596_104316141	3300021086	Vadose Zone Soil	RTQETWPLIGRMAVGIVIVRLATVVPILGWWVKFGVMLWGLGAISLALYNRFQPTLTASAPSGPYMPPPLPPNTTVGGMQPA
Ga0210404_100189303	3300021088	Soil	MGRTRETWPLIGRMAVGLVIVRLATVIPGAGGWIKFGVILWGLGAISLALYDRFQPTLAASAPSGPYTSPLPPNTTVGGMQPA
Ga0210404_100203804	3300021088	Soil	RETWPLIGRMTVGLVIVRLATVIPGAGSWIKFGVILWGIGAISLALYDRFQPTLAANTPSAPYTPPLPPNTTVGGIQQPA
Ga0210406_101315142	3300021168	Soil	SELWPLIGRMAVGLAIVRLCTTIPHVGGWVKFAAILWGIGAISLSIYRRFQTVMVPSGPAAPYTPPMPPNTTLGGVQPA
Ga0210406_110356911	3300021168	Soil	RTRETWPLIGRMTVGLVIARLATMIPGVGPWIKFGVILWGIGAISLALYDRFQPALAANTPSAPYTPPLPPNTTVGGMQQPA
Ga0210406_111686632	3300021168	Soil	GVIIVRLILTIPHITLWTSLAVMLWGMGAISLAIYRKFQPVIAPNAPSAPMTPPLPPNTTIGGVQPA
Ga0210400_115844681	3300021170	Soil	GRMAVGIVIVRMATVVPAVGGWIKFGVILWGLGAISLALYNRFQPTLAASAPSGPYMPPPLPPNTTVGGMQPA
Ga0210405_101858591	3300021171	Soil	GLVIVRLATVIPGAGSWIKFGVILWGIGAISLALYDRFQPTLAANTPSAPYTPPLPPNTTVGGIQQPA
Ga0210405_102460632	3300021171	Soil	LVIVRLATMIPGVGSWIKFGVILWGIGAISLALYDRFQPTLAANSPSAPYTPPQPPNTTVGGIQQPA
Ga0210397_110223872	3300021403	Soil	QEIWPLIGRMAVGFVLLRLCTMIPHVGWVFKYGAAFWGIGAISLVVYRRLQPVIAPGMPSGPYTPPSATVGGAVPA
Ga0210383_104337401	3300021407	Soil	RETWPLIGRMAVGVVIVRLCTTVPHIGGWVKFGVMLWGTGAISLALYRRFQPTISAGIPGAPIVPAPLPPNTTVGGAVPA
Ga0187846_100767781	3300021476	Biofilm	GRTSELWPLIGRMAVGLAVVRLCTIIPHVGGWLKFGAALWGLGAIALAVYKRLQPVIAPNVPSAPMQQPLPV
Ga0247691_10484012	3300024222	Soil	REMWPLIGRMAVGVAIVRLATTIPEIGGWIKFAVILWGVGAISLALYRRFQPVIAAGLPAGPIVPPLPSNTTIGGAQPA
Ga0207662_109390841	3300025918	Switchgrass Rhizosphere	IMGRTRELWPLIGRMAVVIAIVRLATTIPELGGWIKFGTILWGVGAISLAIYRRFQPSISAGSPVGIASPLPPNTTIGGAQPA
Ga0207706_107301842	3300025933	Corn Rhizosphere	AVGIAIVRLATTIPELGGWIKFGTILWGVGAISLAIYRRFQPSISAGSPVGIASPLPPNTTIGGAQPA
Ga0209438_11139362	3300026285	Grasslands Soil	GRMAVGLVIVRLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPSAPYSPPMPPNTTLGGAVPA
Ga0209804_13205202	3300026335	Soil	RMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVSGPLPA
Ga0209057_12138391	3300026342	Soil	RVCTTIPDVGGWVKFVAILWGIGAISLAIFRRFQPVPATGVMIPPGAQPLPPTTTVGGPLPA
Ga0257176_10357532	3300026361	Soil	HLGGWVKFAAMLWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGALPA
Ga0209378_10196313	3300026528	Soil	VVIVRLCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA
Ga0209806_12898782	3300026529	Soil	TSELWPLIGRMTVGVVIVRLCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLPA
Ga0209807_13098311	3300026530	Soil	GRTSEVWPLIGRMAVGIVIVRLATTIPELGGWIKFGTILWGVGAISLALYRRLQPSISAGAPMGLASPLPPNTTIGGAQPA
Ga0209577_108509891	3300026552	Soil	LCTTIPHVGGWVKFAAILWGIGAISLAVYRRFQPVIAPNMPSAPYTPPIPPNTTVGGPLP
Ga0209331_11083332	3300027603	Forest Soil	PYLGGWVKFAVILWGMGAISLAIYRKLQPVIAPGIPGAPIGPGPLPPNTTVGGMQTA
Ga0209076_10118291	3300027643	Vadose Zone Soil	RMAVGLMIVRLCTTIPHLGGWVKFAAMLWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGALPA
Ga0209118_10918062	3300027674	Forest Soil	IGRMAVGLVIVRLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPGAPSAPYSPPMPPNTTVGGAVPA
Ga0209693_102414042	3300027855	Soil	WPLIGRMAVGVVIVRLCTTVPHVGGWVKFGVMLWGTGAISLALYRRFQPAISAGLPGAPSVPTPLHPNTTIGGAVPA
Ga0209701_100480811	3300027862	Vadose Zone Soil	VIVRLCTIIPHVGGWVKFAAILWGIGAISLTLYRRFQPVIAPGVPSGPHTPPLPPNTTVGGALPA
Ga0209701_101628222	3300027862	Vadose Zone Soil	VIVRLCTIIPHVGGWVKFAAILWGIGAISLTLYRRFQPVIAPGVPSAPHTPPLPPNTTVGGALPA
Ga0209283_108804842	3300027875	Vadose Zone Soil	SELWPLIGRMAVGLVILRLCTMIPHLGGWVKLAAILWGIGAISLALYRRFQPMIAPGAPTAPYTPPIPPNTTVGGALPA
Ga0137415_104901021	3300028536	Vadose Zone Soil	GRMAVGLVIVRLCTTIPHLGGWVKFAAILWGIGAISLALYRRFQPMIAPGAPNAPYSPPMPPNTTVGGAVPA
Ga0137415_107658511	3300028536	Vadose Zone Soil	RTSELWPLIGRMAVGVVIVRLFTIIPHVGWVFKYGAAFWGIGAISLVVYRRFQPVIAPSVPSAPYSPPMPPNTTVGGAVPA
Ga0222749_102824882	3300029636	Soil	LIGRMAVGVVIVRLCTTVPHLGGWVKFGVVLWGTGAISLALFRRFQPAISAGIPSAPMPLPPNTTIGGAVPA
Ga0318542_105692781	3300031668	Soil	IPDVGGWVKFVAVLWGIGAISLAVFRRFQPVPATGVTVPPGAQPLPPNTTVGGPVPA
Ga0307476_102308402	3300031715	Hardwood Forest Soil	LIGRMAVGIVIVRIATVVPAVGGWIKFGIILWGLGAISLALYNRFQPTLAPNATSGPYMPPPLPPNTTVGGMQPA
Ga0307477_108380401	3300031753	Hardwood Forest Soil	IVRLATVIPGAGSWIKFGVILWGIGAISLALYDRFQPTLAANTPSAPYTPPLPPNTTVGGIQQPA
Ga0307473_103138941	3300031820	Hardwood Forest Soil	LWPTVGRMAVGVVIVRVCTTIPHVGGWVKFVAILWGIGAISLAVFRRFQPVPATGVMIPPSAQPLPPTTTVGGPLPA
Ga0307479_100688333	3300031962	Hardwood Forest Soil	VGGWVKFAAILWGIGAISLALYRRFQPVIAPSMPSAPYTPPIPPNTTVGGPLPA
Ga0307479_104295272	3300031962	Hardwood Forest Soil	WPLIGRMAVGVVIVRLCTAVPHLGGWVKFGVMLWGMGAISLALYRRFQPAISAGLPGAPIVQTPLPPNTTIGGMAPA
Ga0307479_114091081	3300031962	Hardwood Forest Soil	ELWPLIGRMAVGVVIVRLFTIIPHVGWVFKYGAAFWGIGAISLVVYRRFQPVIAPSVPSAPYSPPLPPNTTVGGAVPA
Ga0318569_103178341	3300032010	Soil	TIPDVGGWVKFVAILWGIGAISLAVFRRFQPVPARGVTVPPGAQPLPPNTTVGGPLPA
Ga0318510_104275861	3300032064	Soil	VVGRMAVGVVIVRLCTTIPDVGGWVKFVAVLWGIGAISLAVFRRFQPVPATGVTVPPGAQPLPPNTTVGGPVPA
Ga0307470_106884061	3300032174	Hardwood Forest Soil	WPLIGRMVVGIIIVRLATVIPEAGGWIKFAVIVWGLGATSLALYNRFQPSIASTPSAPYAPPLPPNTTVGGMQPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040200

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences