Metagenome / Metatranscriptome Family F039803

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039803
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	47 residues
Representative Sequence	MMPWSATVTYRRALGEWPEFVCAENTHEYYAGKDTAVPRADKPDF
Number of Associated Samples	118
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.48 %
% of genes near scaffold ends (potentially truncated)	79.75 %
% of genes from short scaffolds (< 2000 bps)	82.82 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.350 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.313 % of family members)
Environment Ontology (ENVO)	Unclassified (24.540 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.669 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 5.48% Coil/Unstructured: 94.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF00561	Abhydrolase_1	3.07
PF00884	Sulfatase	2.45
PF00583	Acetyltransf_1	1.84
PF06439	3keto-disac_hyd	1.84
PF00106	adh_short	1.84
PF03401	TctC	1.23
PF06441	EHN	1.23
PF00873	ACR_tran	1.23
PF13360	PQQ_2	1.23
PF05935	Arylsulfotrans	1.23
PF10282	Lactonase	0.61
PF01726	LexA_DNA_bind	0.61
PF07582	Obsolete Pfam Family	0.61
PF13751	DDE_Tnp_1_6	0.61
PF02321	OEP	0.61
PF04909	Amidohydro_2	0.61
PF01135	PCMT	0.61
PF02563	Poly_export	0.61
PF13522	GATase_6	0.61
PF02559	CarD_CdnL_TRCF	0.61
PF02668	TauD	0.61
PF02074	Peptidase_M32	0.61
PF00753	Lactamase_B	0.61
PF03972	MmgE_PrpD	0.61
PF02518	HATPase_c	0.61
PF00551	Formyl_trans_N	0.61
PF00291	PALP	0.61
PF12697	Abhydrolase_6	0.61
PF02913	FAD-oxidase_C	0.61
PF11684	DUF3280	0.61
PF03928	HbpS-like	0.61
PF01042	Ribonuc_L-PSP	0.61
PF01124	MAPEG	0.61
PF00891	Methyltransf_2	0.61
PF00196	GerE	0.61
PF01436	NHL	0.61
PF14325	DUF4383	0.61
PF04392	ABC_sub_bind	0.61
PF03551	PadR	0.61
PF00682	HMGL-like	0.61
PF02775	TPP_enzyme_C	0.61
PF01641	SelR	0.61
PF12146	Hydrolase_4	0.61
PF00903	Glyoxalase	0.61
PF00578	AhpC-TSA	0.61
PF00696	AA_kinase	0.61
PF00174	Oxidored_molyb	0.61
PF01546	Peptidase_M20	0.61
PF14319	Zn_Tnp_IS91	0.61
PF05406	WGR	0.61
PF02371	Transposase_20	0.61
PF02666	PS_Dcarbxylase	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.23
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.23
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.23
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.61
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.61
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.61
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	0.61
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.61
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.61
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.61
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG2317	Zn-dependent carboxypeptidase, M32 family	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.61
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.61
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.61
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.61
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.61
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.61
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.61
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	0.61
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.61
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.35 %
Unclassified	root	N/A	38.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.35 %
Unclassified	root	N/A	38.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.35 %
Unclassified	root	N/A	38.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.98 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	4.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.02 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.52 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	4.91 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	2.45 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.52 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	4.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.45 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.84 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.23 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.61 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.52 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	4.91 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.68 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.45 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.84 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.23 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.23 %
Blastochloridaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Alsobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae	0.61 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.61 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.61 %
Cellvibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.52 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	4.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.84 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.23 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.61 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.61 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.61 %
Blastochloris	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris	0.61 %
Saccharophagus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Saccharophagus	0.61 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.61 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.52 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	4.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.84 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.23 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.61 %
unclassified Alsobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter	0.61 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.61 %
unclassified Saccharophagus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Saccharophagus → unclassified Saccharophagus	0.61 %
Blastochloris sulfoviridis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris sulfoviridis	0.61 %
Methylorubrum populi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.61 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.52 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	4.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.84 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.23 %
Afipia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	0.61 %
Saccharophagus sp. K07	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Saccharophagus → unclassified Saccharophagus → Saccharophagus sp. K07	0.61 %
Alsobacter sp. SYSU M60028	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	0.61 %
Microvirga sp. HBU67692	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. HBU67692	0.61 %
Methylorubrum populi BJ001	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi → Methylorubrum populi BJ001	0.61 %
Blastochloris sulfoviridis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris sulfoviridis	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.61 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02FYAFP	Not Available	522	Open in IMG/M
2170459010\|GIO7OMY02GADDL	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	536	Open in IMG/M
3300002245\|JGIcombinedJ26739_101606683	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300004092\|Ga0062389_104974692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300005169\|Ga0066810_10089921	Not Available	665	Open in IMG/M
3300005179\|Ga0066684_10919048	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005187\|Ga0066675_11403274	Not Available	512	Open in IMG/M
3300005332\|Ga0066388_100920407	Not Available	1450	Open in IMG/M
3300005332\|Ga0066388_104140163	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005332\|Ga0066388_104702035	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	695	Open in IMG/M
3300005439\|Ga0070711_101586557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005764\|Ga0066903_100619884	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300005764\|Ga0066903_105568532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	663	Open in IMG/M
3300005764\|Ga0066903_106395353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300005764\|Ga0066903_107647574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300006057\|Ga0075026_100124521	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	1302	Open in IMG/M
3300006162\|Ga0075030_100977691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300006162\|Ga0075030_101602485	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006172\|Ga0075018_10473142	Not Available	649	Open in IMG/M
3300006176\|Ga0070765_100312730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1454	Open in IMG/M
3300006176\|Ga0070765_100548426	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300006176\|Ga0070765_101969796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300006800\|Ga0066660_10341052	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300009038\|Ga0099829_10451561	Not Available	1065	Open in IMG/M
3300009089\|Ga0099828_11168018	Not Available	683	Open in IMG/M
3300009143\|Ga0099792_10132513	Not Available	1352	Open in IMG/M
3300009143\|Ga0099792_11243844	Not Available	506	Open in IMG/M
3300009177\|Ga0105248_10309740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	1778	Open in IMG/M
3300009523\|Ga0116221_1460714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300009523\|Ga0116221_1537429	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300009525\|Ga0116220_10177845	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300009792\|Ga0126374_10492342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	882	Open in IMG/M
3300009792\|Ga0126374_10792434	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300010043\|Ga0126380_10658523	Not Available	835	Open in IMG/M
3300010048\|Ga0126373_10972142	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300010159\|Ga0099796_10255805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300010358\|Ga0126370_12481575	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	516	Open in IMG/M
3300010359\|Ga0126376_12250238	Not Available	590	Open in IMG/M
3300010359\|Ga0126376_12267376	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300010360\|Ga0126372_10188199	Not Available	1703	Open in IMG/M
3300010360\|Ga0126372_11926625	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300010361\|Ga0126378_10077766	All Organisms → cellular organisms → Bacteria	3203	Open in IMG/M
3300010362\|Ga0126377_12954611	Not Available	548	Open in IMG/M
3300010366\|Ga0126379_11791048	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300010376\|Ga0126381_100817036	All Organisms → cellular organisms → Bacteria → Acidobacteria	1339	Open in IMG/M
3300010379\|Ga0136449_101072996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Saccharophagus → unclassified Saccharophagus → Saccharophagus sp. K07	1286	Open in IMG/M
3300011120\|Ga0150983_12524679	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300011270\|Ga0137391_11223221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	599	Open in IMG/M
3300011271\|Ga0137393_10697166	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300012189\|Ga0137388_10471323	Not Available	1165	Open in IMG/M
3300012189\|Ga0137388_11148886	Not Available	713	Open in IMG/M
3300012200\|Ga0137382_10543880	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012202\|Ga0137363_10093174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2272	Open in IMG/M
3300012202\|Ga0137363_10917859	Not Available	743	Open in IMG/M
3300012203\|Ga0137399_11125172	Not Available	661	Open in IMG/M
3300012205\|Ga0137362_10236484	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300012205\|Ga0137362_11026547	Not Available	702	Open in IMG/M
3300012208\|Ga0137376_11255035	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	631	Open in IMG/M
3300012209\|Ga0137379_10178151	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300012349\|Ga0137387_10976111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	609	Open in IMG/M
3300012362\|Ga0137361_10852488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. HBU67692	828	Open in IMG/M
3300012917\|Ga0137395_10162885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1534	Open in IMG/M
3300012917\|Ga0137395_11175089	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300012918\|Ga0137396_10049884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2866	Open in IMG/M
3300012924\|Ga0137413_10453294	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300012927\|Ga0137416_10375958	Not Available	1198	Open in IMG/M
3300012927\|Ga0137416_11000269	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	747	Open in IMG/M
3300012927\|Ga0137416_12182593	Not Available	509	Open in IMG/M
3300012929\|Ga0137404_10593290	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012971\|Ga0126369_10078627	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300012971\|Ga0126369_10195022	Not Available	1948	Open in IMG/M
3300012971\|Ga0126369_10634200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300012971\|Ga0126369_13233975	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300012984\|Ga0164309_10773229	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300014165\|Ga0181523_10771049	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	524	Open in IMG/M
3300014199\|Ga0181535_10192739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1255	Open in IMG/M
3300016270\|Ga0182036_10390558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris sulfoviridis	1082	Open in IMG/M
3300016294\|Ga0182041_10850503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300016294\|Ga0182041_11675585	Not Available	588	Open in IMG/M
3300016294\|Ga0182041_12028347	Not Available	536	Open in IMG/M
3300016357\|Ga0182032_11310522	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300016357\|Ga0182032_11379947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300016371\|Ga0182034_10832040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	791	Open in IMG/M
3300016387\|Ga0182040_11286238	Not Available	617	Open in IMG/M
3300016387\|Ga0182040_11879692	Not Available	513	Open in IMG/M
3300016404\|Ga0182037_10874316	Not Available	778	Open in IMG/M
3300016404\|Ga0182037_11119107	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	689	Open in IMG/M
3300016445\|Ga0182038_10839106	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300016445\|Ga0182038_11469269	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300017933\|Ga0187801_10232885	Not Available	736	Open in IMG/M
3300017936\|Ga0187821_10327541	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300017943\|Ga0187819_10092169	All Organisms → cellular organisms → Bacteria → Acidobacteria	1809	Open in IMG/M
3300017961\|Ga0187778_11128087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300017970\|Ga0187783_10108135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2050	Open in IMG/M
3300017970\|Ga0187783_10413468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	980	Open in IMG/M
3300018062\|Ga0187784_11492822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300018086\|Ga0187769_10042556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3131	Open in IMG/M
3300020170\|Ga0179594_10274243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300020583\|Ga0210401_10526346	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300021086\|Ga0179596_10692342	Not Available	516	Open in IMG/M
3300021171\|Ga0210405_10582913	Not Available	872	Open in IMG/M
3300021388\|Ga0213875_10386057	Not Available	667	Open in IMG/M
3300021401\|Ga0210393_11486879	Not Available	539	Open in IMG/M
3300021420\|Ga0210394_10695590	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	891	Open in IMG/M
3300021474\|Ga0210390_10709545	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300021476\|Ga0187846_10047173	Not Available	1913	Open in IMG/M
3300021476\|Ga0187846_10284836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300021560\|Ga0126371_10173109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum populi → Methylorubrum populi BJ001	2237	Open in IMG/M
3300022724\|Ga0242665_10388019	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300024251\|Ga0247679_1027526	Not Available	960	Open in IMG/M
3300026320\|Ga0209131_1292285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	612	Open in IMG/M
3300026359\|Ga0257163_1001334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2984	Open in IMG/M
3300026551\|Ga0209648_10048618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3642	Open in IMG/M
3300027512\|Ga0209179_1072558	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	755	Open in IMG/M
3300027565\|Ga0209219_1126592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	622	Open in IMG/M
3300027706\|Ga0209581_1107320	Not Available	949	Open in IMG/M
3300027829\|Ga0209773_10269017	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300027903\|Ga0209488_10178526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1603	Open in IMG/M
3300027903\|Ga0209488_10702943	Not Available	724	Open in IMG/M
3300027911\|Ga0209698_10659364	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300027911\|Ga0209698_11228078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300027911\|Ga0209698_11367403	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300028536\|Ga0137415_10256355	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300028536\|Ga0137415_11071918	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031573\|Ga0310915_10673541	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300031708\|Ga0310686_115414857	Not Available	739	Open in IMG/M
3300031719\|Ga0306917_10495642	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	959	Open in IMG/M
3300031719\|Ga0306917_11028227	Not Available	643	Open in IMG/M
3300031744\|Ga0306918_10674777	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	809	Open in IMG/M
3300031771\|Ga0318546_10881674	Not Available	630	Open in IMG/M
3300031833\|Ga0310917_10176870	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300031860\|Ga0318495_10531667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300031879\|Ga0306919_11155718	Not Available	589	Open in IMG/M
3300031879\|Ga0306919_11429285	Not Available	522	Open in IMG/M
3300031890\|Ga0306925_11549286	Not Available	647	Open in IMG/M
3300031912\|Ga0306921_11516246	Not Available	732	Open in IMG/M
3300031941\|Ga0310912_10530956	Not Available	917	Open in IMG/M
3300031942\|Ga0310916_11708964	Not Available	509	Open in IMG/M
3300031945\|Ga0310913_11205112	Not Available	527	Open in IMG/M
3300031946\|Ga0310910_10259863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1360	Open in IMG/M
3300031954\|Ga0306926_10179976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2623	Open in IMG/M
3300032001\|Ga0306922_10094438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3156	Open in IMG/M
3300032001\|Ga0306922_12116722	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	545	Open in IMG/M
3300032076\|Ga0306924_12243920	Not Available	555	Open in IMG/M
3300032892\|Ga0335081_11612972	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300033289\|Ga0310914_11265875	Not Available	640	Open in IMG/M
3300033290\|Ga0318519_10883542	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.16%
Host-Associated	Host-Associated	1.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.96%
Aquatic	Environmental → Aquatic	9.20%
Plants	Host-Associated → Plants	1.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.12%
Sediment	Environmental → Aquatic → Sediment	4.29%
Freshwater	Environmental → Aquatic → Freshwater	4.91%
Cave	Environmental → Terrestrial → Cave	1.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.23%
Peat	Environmental → Terrestrial → Peat	0.61%
Roots	Host-Associated → Plants → Roots	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.62%
Loam	Environmental → Terrestrial → Soil → Loam	8.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.84%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.27%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.23%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.23%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.61%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.61%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_00053590	2170459010	Grass Soil	DEGVFTMPWSATMSYRRAAGKWPEFVCSENIREYYYRKDSEVPRADKPDF
F62_01686100	2170459010	Grass Soil	MPWSAIVTYRRPVLTEWPEEVCAENPHEYYAGKDTAVPHADNPDF
JGIcombinedJ26739_1016066832	3300002245	Forest Soil	LQFTVEDEGVFTTPWSATMTYRRAXGDWPEFVCAENIHEYYYNKXAEVPTAXKPDF*
Ga0062387_1009759802	3300004091	Bog Forest Soil	IVQPDYRGKHLQLQFTVEDEGVFTSPWSATVTYKPASGDWPEWTCAEHPYYFPGAAIPTAEKPDF*
Ga0062389_1049746922	3300004092	Bog Forest Soil	VEDDGVFTMPWSATMTYRRALGKWPEFVCAENIREYYYNRNSEVPTAGKPDF*
Ga0066810_100899211	3300005169	Soil	EGVFTTPWSATMTYRRPLSGLGQWPEMVCAESTRTTYMTKDSAVPYADKPDF*
Ga0066684_109190482	3300005179	Soil	GTVTYRRPLGDWAEMVCAENTHEYYAGSDTAIPVSLKPEF*
Ga0066675_114032741	3300005187	Soil	SASMTYRRASGAWPEFVCPENQHEFYAAGDAQVPRAAKPDF*
Ga0066388_1009204072	3300005332	Tropical Forest Soil	QLQFTVEDEGVFTMPWSATMTYRRALGAWPEFVCAENIREYYYNKDSEVPKADKPDF*
Ga0066388_1041401631	3300005332	Tropical Forest Soil	TITYRRPSLTQRGENVCAENIHEYYAGKDTAVPRAETPDF*
Ga0066388_1047020351	3300005332	Tropical Forest Soil	TVEDEGVFTMPWSAVMTYRRARGDWPEFVCAENIREYYYNKNSEVPRADKPDF*
Ga0070711_1015865571	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FTVEDEGVFTMPWTAGITYRRALGEWPEYVCAENRYEYYSGRDTAVPTADKPDF*
Ga0066903_1006198841	3300005764	Tropical Forest Soil	PWSATMTYRRALGQWPEFVCAENIREYYNNKDSDVPQADNPDF*
Ga0066903_1055685322	3300005764	Tropical Forest Soil	MKASSQRLGRANVTYLRAAIDRPEIVNAENTHVYYAGKDTAVPTSDKPDF*
Ga0066903_1063953532	3300005764	Tropical Forest Soil	VTYLRAAVEWPEIVCAENPHEYYAGKDTAVPTSDKPDF*
Ga0066903_1076475741	3300005764	Tropical Forest Soil	EGAFTMPWSAAITFRRSSEEWRERVCAENTREYYAGKDTEIPHADKPDF*
Ga0075026_1001245212	3300006057	Watersheds	TWRRPLGDWSEHICAENRHEYYSGKDTAVPTADKPDF*
Ga0075030_1009776911	3300006162	Watersheds	GAVTYRRAADDWVEYVCPENTHEYYIGKETAIPVADKPDF*
Ga0075030_1016024852	3300006162	Watersheds	TYLRAAVEWPEIVCAENTHEYYTGKDTAVPTSDKPDF*
Ga0075018_104731421	3300006172	Watersheds	EGVFTMPWSATATYRRALGEWPEMVCAESLRSTYVTKDSAVPHADKPDF*
Ga0070765_1003127301	3300006176	Soil	VFTTPWSATITYRRPLGAWPEFVCAENTLISAGKYEAVPHADRSDF*
Ga0070765_1005484263	3300006176	Soil	VEDDGVFTMPWSASMTYRRATGAWPEFVCSENIREYYYRKDSEVPRADKPDF*
Ga0070765_1019697961	3300006176	Soil	EDDGVFTMRWSASMTYRRASGQWPESVCAENTHEYYFNNKDSDVPRADKHDF*
Ga0066660_103410522	3300006800	Soil	MFTRPWTGTVTYRRPLGDWAEMVCAENTHEYYAGKDTAIPVALKPEF*
Ga0099829_104515611	3300009038	Vadose Zone Soil	RWSATVTYLRAAIEWPEIVCAENPHEYYAGKDASVPKSDKPDF*
Ga0099828_111680182	3300009089	Vadose Zone Soil	RARGAWPEFVCAENIREYYYNKNSEVPAADKPDF*
Ga0099827_105733602	3300009090	Vadose Zone Soil	MVEDEGVFTMPWSATITYRRALATEWREVVCAENTHEYYAGKDTEVPRSDKPDF*
Ga0099792_101325131	3300009143	Vadose Zone Soil	RRPIDPWAESVCAENTHEYYAGKETSIPVAKKPDF*
Ga0099792_112438441	3300009143	Vadose Zone Soil	MMPWSATVTYRRALGEWPEFVCAENTHEYYAGKETALPRADKPDF*
Ga0111538_132862061	3300009156	Populus Rhizosphere	RLLDGWPESVCAENTREYYANKDTEIPVSLSPDF*
Ga0105248_103097401	3300009177	Switchgrass Rhizosphere	TVEDEGVFTMPWKAGMIYRRAAGDWPEAACAENRSEYYAGKDSEVPRADKPDF*
Ga0116221_14607142	3300009523	Peatlands Soil	WTASIVYLRDRLEWPEIVCAENTHEYYNNKESDVPFAAKPDF*
Ga0116221_15374292	3300009523	Peatlands Soil	EFTVDDVGVFTMPWTAVMTYRRASGDWPEFVCAENIHEYYYNKNSEVPTADKPDF*
Ga0116220_101778452	3300009525	Peatlands Soil	WTAVMTYRRASGDWPEFVCAENIHEYYYNKNSEVPTADKPDF*
Ga0116220_104277201	3300009525	Peatlands Soil	TVEDEGVFTMPWSATITRRRSSDDWVEYVCAENTRGTYVVKDSAVPQADKPDF*
Ga0126374_104923421	3300009792	Tropical Forest Soil	TVTYLRASVEWPEIVCAENTHEYYAGKDTAVPASDKPDF*
Ga0126374_107924342	3300009792	Tropical Forest Soil	EDEGVFTAPWSATITYRRPSLTQRGENVCAENIHEYYSGKDTAVPRADTPDF*
Ga0126380_106585233	3300010043	Tropical Forest Soil	YRSRMKGVFKTPWSATATYRRPLGEWPETVCAENLRATYMTKDSDVLRADKPDF*
Ga0126373_109721422	3300010048	Tropical Forest Soil	GVFTMPWSASMTYRRAAGSWPEFACSENIHRYAAGQEPDVPRAATPDF*
Ga0099796_102558051	3300010159	Vadose Zone Soil	MIYRRASGAWPEFVCSENTHEYYAGKESEVPRADKPDF*
Ga0126370_124815751	3300010358	Tropical Forest Soil	GLQLEFTVEDEGVFTMPWTAIMTYRRARGEWPEFVCAENIREYYYNKNSEVPTADKPDF*
Ga0126376_122502382	3300010359	Tropical Forest Soil	WTAIMTYRRARGEWPEFVCAENIREYYYNKNSEVPTADKPDF*
Ga0126376_122673761	3300010359	Tropical Forest Soil	EGVFTKPWSALMTYRRARGKWPEFVCAENIREYYYNKNSEVPTADKPDF*
Ga0126372_101881991	3300010360	Tropical Forest Soil	RRALATEWPEVVCAENTHEYYVGKDTEVPRADKPDF*
Ga0126372_119266252	3300010360	Tropical Forest Soil	VEDEGVFTTPWSATITYRRPSLTVPGENVCAENIHEYYSGKDTAVPRADTPDF*
Ga0126378_100777663	3300010361	Tropical Forest Soil	MTYRRALGQWPEFVCAENIREYYNNKDSDVPQADKPDF*
Ga0126377_124797942	3300010362	Tropical Forest Soil	RALGQWPEFVCAENTREYYNNKDSAVPQADKPDF*
Ga0126377_127693362	3300010362	Tropical Forest Soil	WTGVLTYRRLLDGWPESVCAENTREYYANKDTDVPVDGTPDF*
Ga0126377_129546111	3300010362	Tropical Forest Soil	MWSGTVTYRRPIDPWAESVCAENTHEYYAGKETAIPVAKTPDF*
Ga0126379_117910482	3300010366	Tropical Forest Soil	RALGQWPEIVCAENLRATYMTRDSDVPRADRPDF*
Ga0126381_1008170361	3300010376	Tropical Forest Soil	MPWKAGMIYRRGAGAWPEAACAENRAQYYAGKDAEVPRADKPDF*
Ga0136449_1010729964	3300010379	Peatlands Soil	RAAGAWPEFVCSENIREYYYRKDSEVPRADKPDF*
Ga0136449_1034413432	3300010379	Peatlands Soil	MPWSATVTYRRPLGEWSEMVCAENLQGYFHGKDAGVPTADKPDF*
Ga0150983_125246792	3300011120	Forest Soil	WTGTVTYRRPLGDWAEMVCAENTHEYYAGKETSIPVALTPDF*
Ga0137391_112232212	3300011270	Vadose Zone Soil	VTYRRPSVTQWEEIVCAENPHEYYAGKVTAVPTADKPDF*
Ga0137393_106971662	3300011271	Vadose Zone Soil	RRASGAWPEFVCSENTHEYYAGKEAEVPRADRPDF*
Ga0137388_104713231	3300012189	Vadose Zone Soil	ASMIYRRASGAWPEFVCSENTHEYYAGKESAVPRADRPDF*
Ga0137388_111488861	3300012189	Vadose Zone Soil	TYRRGNREWDENVCAENTHEYYAGTDTAIPHADKPDF*
Ga0137382_105438802	3300012200	Vadose Zone Soil	MPWSASMIYRRATGGWPEFACAENRQEYYSGKESEVPRADKADF*
Ga0137363_100931743	3300012202	Vadose Zone Soil	FTMPWSATITYRRALATEWREVVCAENTHEYYAGKDTEVPRSDKPDF*
Ga0137363_109178591	3300012202	Vadose Zone Soil	TVEDDGVFTMPWSATMTYRRALGQWPEFVCAENIREYYNNKDSDVPRADKPDF*
Ga0137399_111251722	3300012203	Vadose Zone Soil	MMPWSATVTYRRALGEWPEFVCAENTHEYHAGKETALPRADKPDF*
Ga0137362_102364843	3300012205	Vadose Zone Soil	FTMPWSATITYRRALATEWREVVCAENTHEYYAGKDTEVPRADKPDF*
Ga0137362_110265471	3300012205	Vadose Zone Soil	RALATEWREVVCAENTHEYYAGKDTEVPRSDKPDF*
Ga0137376_112550352	3300012208	Vadose Zone Soil	MPWSASMTYRRATGAWPEFACAENRQEYYSGKESEVPRADKADF*
Ga0137379_101781513	3300012209	Vadose Zone Soil	AMMTYRRAVGAWPEFVCSENRHEYYYNKDAEVPTADKPDF*
Ga0137387_109761112	3300012349	Vadose Zone Soil	MTYRRASGNWPEFVCAENIREYYYKKDSDVPRAEKPDF*
Ga0137384_100189681	3300012357	Vadose Zone Soil	RGKALQLQFTVEDEGVFTMPWSASMTYRRASGAWPEFVCSENTHEYYAGKEAEVPRADRPDF*
Ga0137361_108524882	3300012362	Vadose Zone Soil	EDEGVFTVPWSATITYRRALATEWPEVVCAENTHEYYAGKDTEVPRADKPDF*
Ga0137395_101628851	3300012917	Vadose Zone Soil	TMPWSATITYRRALVPAWREVVCAENMHESYAGQDPEVPRADKPDF*
Ga0137395_111750891	3300012917	Vadose Zone Soil	NYRGSGLQLEFTVEDEGVFTMPWSAVMTYRRARGEWPEFVCAENIREYYYNKNSEVPTADKPDF*
Ga0137396_100498841	3300012918	Vadose Zone Soil	MMPWSATVTYRRALGEWPEFVCAENTHEYHAGKETALPRGDKPDF*
Ga0137413_104532941	3300012924	Vadose Zone Soil	PGVGYRAPRRRPLGEWNEMVCAENPHEYYAGKDTAVPTADQPDF*
Ga0137416_103759582	3300012927	Vadose Zone Soil	TTPWSASMTYRRASGAWPEFACAENRQEYYSGKESEVPRADKADF*
Ga0137416_110002691	3300012927	Vadose Zone Soil	EGVFTMPWSAVMTYRRARGDWPEFVCAENIREYYYNKNSEVPTADKPDF*
Ga0137416_121825931	3300012927	Vadose Zone Soil	EDEGVFMMPWSATVTYRRALGEWPEFVCAENTHEYHAGKETALPRADKPDF*
Ga0137404_105932901	3300012929	Vadose Zone Soil	TVEDEGVFTMPWSASMTYRRASGAWPEFVCSENTHEYYAGKEAEVPRADRPDF*
Ga0137410_101744743	3300012944	Vadose Zone Soil	LVTYRHVLDEWPEAVCAENTREYYADKDTQVPQADKPDF*
Ga0126369_100786271	3300012971	Tropical Forest Soil	LHGAFTMPWSATMTYRRALGQWPEFVCAENIREYYNNKDSDVPQADKPDF*
Ga0126369_101950221	3300012971	Tropical Forest Soil	MPWSATMTYRRALGQWPEFVCAENIREYYNNKDSDVPQADTPDF*
Ga0126369_106342001	3300012971	Tropical Forest Soil	GVFTMPWSAIMTYRRARGGWPEFVCVENIREYYYNKNSEIPTADKPDF*
Ga0126369_132339752	3300012971	Tropical Forest Soil	FRRSSEEWRERVCAENTHEYYAGKDTAVPHADKPDF*
Ga0164309_107732292	3300012984	Soil	FTMPWSASMTYRRASGAWPEFVCSENTHEYYAGKEAEVPRADKPDF*
Ga0181523_107710492	3300014165	Bog	FTMPWSATMTYRRALGDWPEFACAENIHEYYYKKDSEVPTAGKPDF*
Ga0181535_101927393	3300014199	Bog	VFTTPWSATITYRRALDKEWLEYVCAENTYESYGKRAVPTADKPDF*
Ga0182036_103905581	3300016270	Soil	GLQLEFTVEDEGVFTMPWSATMTYRRAMGAWPEFVCAENIREYYYNKDSEVPTAHKPDF
Ga0182041_108505031	3300016294	Soil	EGVFTTPWSATITYRRAGLTDWGETVCAENIHEYYTGKETAVPRSDKPDF
Ga0182041_116755852	3300016294	Soil	VTYRRALGEWPEMACAENLRSTYVTKDSAVPRAEKPDF
Ga0182041_120283472	3300016294	Soil	ATVTYRRALGEWPEMACAENLRSTYVTKDSAVPRAEKPDF
Ga0182032_113105221	3300016357	Soil	QLQFTVEDDGVFTMPWSASMTYRRALGDWPEFVCAENIREYYYNKDSEVPKAGRPDF
Ga0182032_113799471	3300016357	Soil	QFTVEDEGVFTMPWSATVTYRRALGEWPEMACAENLRSTYVTKDSAVPRAEKPDF
Ga0182034_108320403	3300016371	Soil	YRRALGEWPEMACAENLRSTYVTKDSAVPRAEKPDF
Ga0182040_112862382	3300016387	Soil	MPWTAGITYRRALGEWPEYVCTENRHEYYSGRDTAVPTADKPDF
Ga0182040_118796921	3300016387	Soil	TYRRALGEWPEMACAENLRSTYVTKDSAVPRAEEPDF
Ga0182037_108743161	3300016404	Soil	DDGVFTMPWSASMTYRRALGDWPEFVCAENIREYYYNKDSEVPKAGRPDF
Ga0182037_111191071	3300016404	Soil	LQFTVVDEGVFTMPWSATVTYRRALDEWPEVICAENTREYYAGRDTAVPRADKPDF
Ga0182038_108391062	3300016445	Soil	GLQLEFRVEDEGVFTTPWSATMTYRRPLSGLGQWPEMVCVESTRTTYMTKDSAVPHADKPDF
Ga0182038_114692692	3300016445	Soil	VFTMPWSATVTYRRALDEWPEIICAENTREYYAGRDTAVPRADKPDF
Ga0187801_102328852	3300017933	Freshwater Sediment	VTITYGRTSGEWPENVCVENIHEYYYNKNSEVPTAAKPDF
Ga0187821_103275411	3300017936	Freshwater Sediment	PWSGTVTYRRPAAGWAEMVCAENTHEYYAGKDTAIPVALRPDF
Ga0187819_100921693	3300017943	Freshwater Sediment	MPWSATVTYRRALSAIPENVCAENLRGTYVAKDTAVPRADKPDF
Ga0187779_112718011	3300017959	Tropical Peatland	ATITYRRAANEWSENVCAENLQEYYYNKRVEVPTADKPDF
Ga0187778_111280872	3300017961	Tropical Peatland	GKFLQVHITVEDKGVFTTPWTATVTYARDSREWPEIACAENIHEYYYNKNSEVPTAGKPD
Ga0187783_101081353	3300017970	Tropical Peatland	MPRSATVTYLRASVEWPEIVCAENTHEYYAEKDTAVPTSDKPDF
Ga0187783_104134681	3300017970	Tropical Peatland	YRRPSGEWPEEVCAENTHEYYAAKETEVPRADKPDF
Ga0187784_114928221	3300018062	Tropical Peatland	PWSAGVTYRHPLGEWPEMVCAENLRATFITKDSDVPRADQPDF
Ga0187769_100425563	3300018086	Tropical Peatland	FTMPWTATVTYRRALGEWPEFICLENVHEYYYRKNSDTPTVEKPDF
Ga0179594_102742431	3300020170	Vadose Zone Soil	RVEYGTVEDEGVFMMPWSATVTYRRALGEWPEFVCAENTHEYHAGKETALPRADKPDF
Ga0210401_105263461	3300020583	Soil	VTYQRPLGDWAEFVCAENLRATYVTKDSAVPRADKPDF
Ga0179596_106923421	3300021086	Vadose Zone Soil	FTMPWSATITYRRALATEWREVVCAENTHEYYAGKDTEVPRADKPDF
Ga0210405_105829132	3300021171	Soil	TYRRALGDWPEFACAENIHEYYYKKDSEVPTADKPDF
Ga0213875_103860571	3300021388	Plant Roots	YRRAKGEWPEEVCAENLRSTYVTKDSEVPRADKPDF
Ga0210393_114868791	3300021401	Soil	YRRPVAAWAEMVCAENTHEYYAGKDTAIPTANQPDF
Ga0210394_106955901	3300021420	Soil	MPWTAVMTYRRASGDWPEFVCAENIHEYYYNKNSEVPTADRPDF
Ga0210390_107095452	3300021474	Soil	MTYRRASGDWPEFVCAENIHEYYYNKNSEVPTADRPDF
Ga0187846_100471731	3300021476	Biofilm	FTVEDEGVFTMPWSATMTYRRALRQWPEFVCAENIREYYNNMDSDVPRADKPDF
Ga0187846_102848362	3300021476	Biofilm	ITFRRSSEEWRERVCAENTHEYYSGKDTAVPRADKPDF
Ga0126371_101731093	3300021560	Tropical Forest Soil	FTMPWSATATYRRALGEWPEMVCAESLRSTYITKDSAVPHADKPDF
Ga0242665_103880192	3300022724	Soil	VDASYRGKGMQLVFTVDDDGVFTMPWTAVMTYRRASGDWPEFVCAENIHEYYYNKNSEVPTAGKPEF
Ga0247679_10275262	3300024251	Soil	FNTPWSGAATYRRAAGWVENVCAENPHEYYAGKDTDVPKADKPDF
Ga0209131_12922852	3300026320	Grasslands Soil	DEGVFTMPWSASMIYRRASGGWPEFACSENTHEYYAGKESEVPRADKPDF
Ga0257163_10013343	3300026359	Soil	MMPWSATVTYRRALGEWPEFVCAENTHEYYAGKDTAVPRADKPDF
Ga0257165_10218073	3300026507	Soil	VEDEGVFTMPWSATITYRRALATEWREVVCAENTHEYYAGKDTEVPRSDKPDF
Ga0209648_100486184	3300026551	Grasslands Soil	PNYRGSGLQLEFTVEDEGVFTMPWSAVMTYRRARGEWPEFVCAENIREYYYNKNSEVPTADKPDF
Ga0209179_10725582	3300027512	Vadose Zone Soil	GSGLQLEFTVEDEGVFTMPWSAVMTYRRARGEWPEFVCAENIREYYYNKNSEVPTADKPD
Ga0209219_11265922	3300027565	Forest Soil	YRHVLGEWPEAVCAENTHEYYAGKDTAIPTAARPDF
Ga0209581_11073203	3300027706	Surface Soil	GVFTMPWSALMTYRRARGGWPEFVCAENIREYYYNKNSEVPTADKPDF
Ga0209773_102690171	3300027829	Bog Forest Soil	FTVEDDGVFTMPWSATMTYRRALDEWPESVCAENIREYYYNKNSEVPTAGKPDF
Ga0209488_100490681	3300027903	Vadose Zone Soil	FTVEDEGVFTMPWSATVTYLRASVEWPEIVCAENTHEYYAGKDTAVPTSDKPDF
Ga0209488_101785261	3300027903	Vadose Zone Soil	YRRALGEWPEIVCAENLRSTYVTKDSAVPRAEKPDF
Ga0209488_107029431	3300027903	Vadose Zone Soil	MMPWSATVTYRRALGEWPEFVCAENTHEYYAGKETALPRADKPDF
Ga0209698_106593642	3300027911	Watersheds	DGDIFTMPWSAGMIYRRAAGSWPEAVCAENRHEYYAGKESEVPRADKPDF
Ga0209698_112280781	3300027911	Watersheds	TYRRAADDWVEYVCPENTHEYYIGKETAIPVADKPDF
Ga0209698_113674032	3300027911	Watersheds	VTYLRAAVEWPEIVCAENTHEYYTGKDTAVPTSDKPDF
Ga0137415_102563552	3300028536	Vadose Zone Soil	MMPWSATVTYRRALGEWPEFVCAENTHEYHAGKETALPRADKPDF
Ga0137415_110719182	3300028536	Vadose Zone Soil	TTPWSASMTYRRASGAWPEFACAENRQEYYSGKESEVPRADKADF
Ga0311334_116189671	3300029987	Fen	KGKGLQLEFTVEDDGVFTMPWSALMTYRRASGQWPESVCAENTHEYYYNKNSEVPVAEKPDF
Ga0310915_106735413	3300031573	Soil	ITFRRSSEEWRERVCAENTHEYYAGKDTAVPHADKPDF
Ga0310686_1154148571	3300031708	Soil	EDDGVFTMPWSATMTYRRASGAWPEFVYAENIREYYNDKDSDVPRADKPDF
Ga0306917_104956421	3300031719	Soil	VDAGYQGRGLQLQFTVEDDGVFTMPWSASMTYRRALGDWPEFVCAENIREYYYNKDSEVPKAGRPDF
Ga0306917_110282272	3300031719	Soil	EGAFTTPWTTTITYARDPAEWREVVCAENRYEYYNKKESEVPRADKPDF
Ga0306918_106747773	3300031744	Soil	FTVEDEGVFTMPWSATVTYRRALGEWPEMACAENLRSTYVTKDSAVPRAEKPDF
Ga0318521_109547061	3300031770	Soil	FMVEDEGVFTTPWSATVTYRRPSLTDWEENVCAENIHEYYAGKDTAVPRAETPDF
Ga0318546_108816741	3300031771	Soil	ITYRRALGEWPEYVCPENRHEYYSGKDTAVPTADKPDF
Ga0310917_101768703	3300031833	Soil	ATVTYRRALDEWPEIICAENTREYYAGRDTAVPRADKPDF
Ga0318495_105316672	3300031860	Soil	FTTPWSATITYRRPSLTEPGENVCAENIHEYYAGKDTAVPRAEIPDF
Ga0306919_111557181	3300031879	Soil	KALRLEFTVEDDGVFTMPWSATMTYRRAAGAWPEFVCSENIREYYYRKDSEVPRADKPDF
Ga0306919_114292852	3300031879	Soil	ITYRRALGEWPEYVCVENRHEYYSGRDTAVPTADKPDF
Ga0306925_115492862	3300031890	Soil	TAGITYRRALGEWPEYVCVENRHEYYSGRDTAVPTADKPDF
Ga0306921_115162463	3300031912	Soil	FTMPWSATMTYRRAAGAWPEFVCSENIREYYYRKDSEVPRADQPDF
Ga0310912_105309563	3300031941	Soil	ITYRRARLTDWGETVCAENIHEYYAGKDTAVPRSDKPDF
Ga0310916_117089641	3300031942	Soil	KGVFTMPWSATATYRRALGEWPEMVCAESLRSTYVTRDSAVPHADKPDF
Ga0310913_112051121	3300031945	Soil	TMPWSAAITFRRSSEEWRERVCAENTHEYYAGKDTAVPHADKPDF
Ga0310910_102598631	3300031946	Soil	VFTMPWSATVTYRRALGEWPEMACAENLRSTYVTKDSAVPRAEKPDF
Ga0306926_101799765	3300031954	Soil	TGKGLQLEFRVEDEGVFTTPWSATMTYRRPLSGLGQWPEMVCVESTRTTYMTKDSAVPHADKPDF
Ga0306922_100944381	3300032001	Soil	LQLQFTVEDDGVFTMPWSASMTYRRALGDWPEFVCAENIREYYYNKDSEVPKAGRPDF
Ga0306922_121167221	3300032001	Soil	NHKGKGLQLQFTVEDDGAFTMPWSATMTYRRALGQWPEFVCAENIREYYNNKDSDVPQADKPDF
Ga0306922_122238242	3300032001	Soil	ASYPGKALQLEFTVEDDRVFTMPWSATMTYRRAAGAWPEFACSENIREYYYGRDSEVPRADKPDF
Ga0306924_122439201	3300032076	Soil	WSAAITFRRSSEEWRERVCAENTHEYYAGKNTAVPHADKPDF
Ga0335081_116129723	3300032892	Soil	TYRRPLGGWPEFVCAENILISPGKSEDVPRADKPDF
Ga0335081_117257121	3300032892	Soil	GKGLQLEFTVDDEGVFTMPWTATITYRRAANEWSENVCAENLQEYYYNKRVEVPTADKPD
Ga0310914_112658751	3300033289	Soil	GAFTMSWSAAVTFRRSSEEWRERVCAENQHVYYAGQDTAVPRADKPDF
Ga0318519_108835422	3300033290	Soil	DEGVFTMLWSATVTYRRALGEWPEMACAESLRSTYVTKDSAVPRAEKPDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039803

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences