Metagenome / Metatranscriptome Family F039802

Basic Information
Family ID	F039802
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	38 residues
Representative Sequence	MWIIWYVAMMASLRAMGLAPSPVPVRTDEDRTPYGDI
Number of Associated Samples	112
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.23 %
% of genes near scaffold ends (potentially truncated)	26.99 %
% of genes from short scaffolds (< 2000 bps)	87.12 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (55.828 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (16.564 % of family members)
Environment Ontology (ENVO)	Unclassified (37.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.939 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50 1GPINP_00371430 2KansclcFeb2_16490030 3KansclcFeb2_09812290 4E4A_10276500 5F24TB_101790782 6AF_2010_repII_A1DRAFT_100309272 7AF_2010_repII_A1DRAFT_100323182 8AF_2010_repII_A1DRAFT_101783031 9AF_2010_repII_A100DRAFT_10245383 10AF_2010_repII_A100DRAFT_10448692 11JGI12627J18819_100531253 12JGI25382J43887_101938131 13Ga0008092_112226351 14Ga0066678_100310722 15Ga0066388_1035574011 16Ga0008090_100449082 17Ga0008090_158733231 18Ga0066697_104532532 19Ga0066701_100231362 20Ga0066661_100534962 21Ga0066692_104347801 22Ga0066707_100320124 23Ga0066700_102359221 24Ga0066702_104220822 25Ga0066708_104979733 26Ga0066654_101491681 27Ga0066905_1000096695 28Ga0066905_1002765872 29Ga0066905_1002802493 30Ga0066905_1002933122 31Ga0066905_1007964153 32Ga0066905_1008442591 33Ga0066905_1020181481 34Ga0066905_1020427571 35Ga0066903_1020881682 36Ga0066903_1032596012 37Ga0066903_1036414613 38Ga0066903_1043315642 39Ga0066903_1045146851 40Ga0066903_1059156552 41Ga0081455_100153302 42Ga0081540_10062863 43Ga0070717_100970693 44Ga0070717_103025021 45Ga0070717_116870271 46Ga0066656_111421851 47Ga0066652_1005396572 48Ga0075432_101470732 49Ga0075018_104812692 50Ga0070716_1008181002 51Ga0070716_1012573511 52Ga0066653_101958731 53Ga0066665_105983832 54Ga0066665_115624991 55Ga0066659_102148352 56Ga0079221_108965731 57Ga0075428_1001196372 58Ga0075425_1000547522 59Ga0075425_1027281002 60Ga0075425_1030049071 61Ga0075436_1003900842 62Ga0081244_15043552 63Ga0075435_1004409802 64Ga0099791_100570272 65Ga0114129_108202871 66Ga0075423_103404281 67Ga0126374_107025751 68Ga0126374_107251851 69Ga0126384_102121542 70Ga0126384_104514292 71Ga0126384_109994811 72Ga0126384_111673871 73Ga0126382_100133602 74Ga0099796_103400753 75Ga0134084_100146862 76Ga0134086_103075811 77Ga0126370_113145502 78Ga0126376_103025172 79Ga0126376_128511832 80Ga0126372_102963051 81Ga0126372_105617762 82Ga0126372_118771382 83Ga0126378_109379172 84Ga0126378_115912531 85Ga0126379_104955262 86Ga0126379_119539173 87Ga0126379_129826881 88Ga0126381_1004870352 89Ga0126383_110594761 90Ga0124850_11208762 91Ga0124850_11346322 92Ga0151489_17141481 93Ga0120191_100179781 94Ga0137364_102088842 95Ga0137383_101186012 96Ga0137383_103014352 97Ga0137376_101895772 98Ga0137366_102129112 99Ga0137369_102987921 100Ga0137361_113244461 101Ga0126375_112134702 102Ga0164300_105257222 103Ga0164304_105059662 104Ga0132257_1039053131 105Ga0132255_1001418785 106Ga0182035_102292251 107Ga0182034_105503692 108Ga0066655_100694352 109Ga0066667_104357461 110Ga0066662_114646372 111Ga0066662_119002442 112Ga0210407_112260582 113Ga0210399_103804082 114Ga0210399_104925181 115Ga0210406_112897271 116Ga0210408_103007302 117Ga0213879_100052931 118Ga0126371_106429432 119Ga0126371_114746432 120Ga0126371_120685561 121Ga0126371_122025332 122Ga0126371_124856431 123Ga0126371_128897802 124Ga0179589_104233802 125Ga0207692_110365292 126Ga0207665_113681552 127Ga0209240_10046623 128Ga0209239_10159433 129Ga0209239_10506562 130Ga0209266_11756371 131Ga0209378_11094782 132Ga0209056_101660271 133Ga0209474_100229162 134Ga0209523_10402911 135Ga0209466_10017832 136Ga0209465_101213502 137Ga0209465_104360491 138Ga0209488_108435772 139Ga0307307_100401712 140Ga0307277_100000143 141Ga0318516_100604413 142Ga0318516_101808402 143Ga0318516_104241982 144Ga0318534_101064472 145Ga0318541_101389662 146Ga0318541_102091412 147Ga0318541_105119811 148Ga0310915_100293762 149Ga0310915_101070942 150Ga0318500_103338972 151Ga0306918_103111381 152Ga0306918_107070782 153Ga0318521_104719882 154Ga0318503_101185482 155Ga0318512_102816211 156Ga0318536_101880902 157Ga0306921_124530151 158Ga0310912_112486821 159Ga0306926_124513741 160Ga0306922_110112492 161Ga0306922_112337921 162Ga0318570_100621741 163Ga0306924_117038971
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50 1GPINP_00371430 2KansclcFeb2_09812290 3AF_2010_repII_A1DRAFT_100309272 4JGI25382J43887_101938131 5Ga0066678_100310722 6Ga0008090_100449082 7Ga0008090_158733231 8Ga0066700_102359221 9Ga0066708_104979733 10Ga0066905_1002802493 11Ga0182035_102292251
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36. 1Ga0126384_102121542 2GPINP_00371430 3KansclcFeb2_16490030 4KansclcFeb2_09812290 5E4A_10276500 6F24TB_101790782 7AF_2010_repII_A1DRAFT_100323182 8AF_2010_repII_A1DRAFT_101783031 9Ga0066905_1002765872 10Ga0066905_1002802493 11Ga0066905_1008442591 12Ga0066903_1043315642 13Ga0079221_108965731 14Ga0099791_100570272 15Ga0126374_107251851 16Ga0126372_105617762 17Ga0126372_118771382 18Ga0126378_115912531 19Ga0126379_104955262 20Ga0126379_129826881 21Ga0126383_110594761 22Ga0124850_11208762 23Ga0137364_102088842 24Ga0137383_101186012 25Ga0137383_103014352 26Ga0132255_1001418785 27Ga0066655_100694352 28Ga0210407_112260582 29Ga0210399_104925181 30Ga0210406_112897271 31Ga0126371_124856431 32Ga0306924_117038971
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.15% β-sheet: 0.00% Coil/Unstructured: 73.85%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF02481	DNA_processg_A	36.81
PF01751	Toprim	26.38
PF13368	Toprim_C_rpt	1.84
PF02660	G3P_acyltransf	0.61
PF02548	Pantoate_transf	0.61
PF13577	SnoaL_4	0.61
PF00571	CBS	0.61
PF01510	Amidase_2	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	73.62
COG0344	Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase	Lipid transport and metabolism [I]	0.61
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.61

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.83 %
Unclassified	root	N/A	44.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.83 %
Unclassified	root	N/A	44.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.83 %
Unclassified	root	N/A	44.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %
Unclassified	root	N/A	44.17 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %
Unclassified	root	N/A	44.17 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.83 %
Unclassified	root	N/A	44.17 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.61 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.43 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.61 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7.98 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.61 %
Unclassified	root	N/A	44.17 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.61 %

Name	Rank	Taxonomy	Distribution
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.68 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	7.98 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.61 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.61 %
Unclassified	root	N/A	44.17 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.61 %

Name	Rank	Taxonomy	Distribution
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.61 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.68 %
Methylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	7.98 %
Unclassified	root	N/A	44.17 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.61 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.61 %

Name	Rank	Taxonomy	Distribution
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	0.61 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.68 %
Methylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium aquaticum	7.98 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.61 %
Unclassified	root	N/A	44.17 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.61 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02F96T1	Not Available	502	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig824991	Not Available	806	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig99619	Not Available	628	Open in IMG/M
2170459003\|FZN2CUW02H59IV	Not Available	511	Open in IMG/M
3300000550\|F24TB_10179078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1211	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10030927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1445	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10032318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1409	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10178303	Not Available	503	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1024538	All Organisms → cellular organisms → Bacteria → Proteobacteria	1128	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1044869	Not Available	796	Open in IMG/M

Showing 1 to 10 of 163 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.02%
Host-Associated	Host-Associated	7.98%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	0.61%
Plants	Host-Associated → Plants	7.98%
Terrestrial	Environmental → Terrestrial	91.41%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.52%
Sediment	Environmental → Aquatic → Sediment	0.61%
Soil	Environmental → Terrestrial → Soil	91.41%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.23%
Loam	Environmental → Terrestrial → Soil → Loam	18.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.61%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.23%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.23%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.23%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.27%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M

Showing 1 to 10 of 112 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_00371430	2065487018	Soil	MWIVMYIAMMASLRAMGLAPGFVPVRTDEDRPPFGEI
KansclcFeb2_16490030	2124908045	Soil	MWIIWYIGMMASLRAMGLAPGVVPVRIDEDRKPYGDF
KansclcFeb2_09812290	2124908045	Soil	MWIIWYIGMMASLRAMGFAPNLVPIRTDEDRTPFDGV
E4A_10276500	2170459003	Grass Soil	AMWIIMYVVMMASLRAMGVAPSVVPVRTDEDPRPPFGEI
F24TB_101790782	3300000550	Soil	MWIIWYIGMMASLRAMGLAPNLLPIRTDEDRTPFGDV*
AF_2010_repII_A1DRAFT_100309272	3300000597	Forest Soil	MWIIWYVAMMASLRAVGLAPNPVPVRIXEDRKPYGDF*
AF_2010_repII_A1DRAFT_100323182	3300000597	Forest Soil	MWIIWYIGMMASLRAMGLAPSLVPIKIDEDRKPFGDM*
AF_2010_repII_A1DRAFT_101783031	3300000597	Forest Soil	MWIIWYVAMMASLRAMGLAPSPVLVRTDVDRKPYGDF*
AF_2010_repII_A100DRAFT_10245383	3300000655	Forest Soil	MWIIWYVAMVASLRAMGLAPSPVPVRTDEDRTPFTDI*
AF_2010_repII_A100DRAFT_10448692	3300000655	Forest Soil	MWIIWYIGLMASLRAMGLAPSLVPIKIDEDRKPFGDM*
JGI12627J18819_100531253	3300001867	Forest Soil	MWIIWYIGMMASLRAMGLAPGVVPVRTDEDRKPYGDF*
JGI25382J43887_101938131	3300002908	Grasslands Soil	DWAMWIIWYVAMVASLRAMGLAPSVVPVRTDEDRTPFGDI*
Ga0008092_112226351	3300004629	Tropical Rainforest Soil	GDWAMWIIWYVAMVASLRATGLAPSPVPVRTDEDRTPFTDI*
Ga0066678_100310722	3300005181	Soil	LIRGDWAMWIIWYIGMMASLRAMGLAPGVVPVRIDEDRKPYGDF*
Ga0066388_1035574011	3300005332	Tropical Forest Soil	VGDGAMWIIWYIGLMASLRAMGLAPSLVPIKIDEDRKPFGDM*
Ga0008090_100449082	3300005363	Tropical Rainforest Soil	VGFVGDGAMWIIWYIGLMASLRAMGLAPSLVPIKIDEDRKPFGDM*
Ga0008090_158733231	3300005363	Tropical Rainforest Soil	LGYVDIWYVAMMASLRAMGLAPSPVLVRTDVDRKPYGDF*
Ga0066697_104532532	3300005540	Soil	GSRAMWIIMYIAMVASLRAMGLAPSMVPVRTDEDRPPFGEI*
Ga0066701_100231362	3300005552	Soil	MWIIMYIAVMASLRAMGLAPDLVQVRTDDDHRPPYGDI*
Ga0066661_100534962	3300005554	Soil	MWIIWYIGMMASLRAMGLAPGVVPVRIDEDRKPYGDF*
Ga0066692_104347801	3300005555	Soil	MWIIWYVAMVASLRAMGLAPSVVPVRTDEDRTPFGDI*
Ga0066707_100320124	3300005556	Soil	MWIIWYIGMMASLRTMGLAPGVVPVRIDEDRKPYGDF*
Ga0066700_102359221	3300005559	Soil	MWIIMYIAVMASLQAMGLEPSLVPVKTDDDDRPPCGDI*
Ga0066702_104220822	3300005575	Soil	MWIIMYIAMVASLRAMGLAPSMVPVRTDEDRPPFGEI*
Ga0066708_104979733	3300005576	Soil	IMYIAVMASLRAMGLAPDLVQVRTDDDHRPPYGDI*
Ga0066654_101491681	3300005587	Soil	AMWIIMYIAVMASLRAMGLAPDLVQVRTDDDHRPPYGDI*
Ga0066905_1000096695	3300005713	Tropical Forest Soil	MWIIMYIAMVASMRAMGLAPSLVPVRTDEDRPPFGEM*
Ga0066905_1002765872	3300005713	Tropical Forest Soil	MWIIMYVAVMASLRAMGLAPSFVPIRNDDDRRPPFGEI*
Ga0066905_1002802493	3300005713	Tropical Forest Soil	MWIVFYVAMMGSLRAMGLAPNLMQVETDEDLDSEI*
Ga0066905_1002933122	3300005713	Tropical Forest Soil	MWIIWYIGMMASLRAMGLAPGVVPVRINEDRKPYGDF*
Ga0066905_1007964153	3300005713	Tropical Forest Soil	MWIIWYVAMVASLRALGLAPSPVPVRTDEDRKPYGDF*
Ga0066905_1008442591	3300005713	Tropical Forest Soil	MWIIWYVAMMASLRAMGLAPIAVPVRTDDERTPFSDI*
Ga0066905_1020181481	3300005713	Tropical Forest Soil	MWIIWYVAMVASLRAIGLAPSPVPVRTDEDRKPYGDF*
Ga0066905_1020427571	3300005713	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPSPVPVRTDEDRKPYGDF*
Ga0066903_1020881682	3300005764	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPSPVPVRTDEDRKPYGEF*
Ga0066903_1032596012	3300005764	Tropical Forest Soil	MWIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYG
Ga0066903_1036414613	3300005764	Tropical Forest Soil	GDWAMWIIWYVAMMASLRAMGLAPSPVLVRTDVDRKPYGDF*
Ga0066903_1043315642	3300005764	Tropical Forest Soil	MWIIWYVAMVASLRALGLAPSVVPVRIDEDRTPYGDV*
Ga0066903_1045146851	3300005764	Tropical Forest Soil	MWIIWYVAMMASLRAMGLAPIAVPVRTDEERTPFCDI*
Ga0066903_1059156552	3300005764	Tropical Forest Soil	FRLGEWAMWIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF*
Ga0081455_100153302	3300005937	Tabebuia Heterophylla Rhizosphere	MWIIWYIGMMASLRAMGLAPSLVPIRTDEDRKPFGDM*
Ga0081540_10062863	3300005983	Tabebuia Heterophylla Rhizosphere	MWIIMYIAMVASLRAMGLAPSMVPVRTDEDRPPFGEM*
Ga0070717_100970693	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MWIVMYIAMMASLRAMGLAPGFVPVRTDEDRPPFGEI*
Ga0070717_103025021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MWIIMYVAMIASLRAMGLAPSSVPVRTDDDHRPPFGEI*
Ga0070717_116870271	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AMWIIWYIGMMASLRAMGLAPGVVPVRIDEDRKPYGDF*
Ga0066656_111421851	3300006034	Soil	MWIIWYIGMLASLRAMGLAHGVVPVRIDEDRKPYGDF*
Ga0066652_1005396572	3300006046	Soil	MWIIWYIGMMASLRAMGFAPNLLPIRTDEDRKPFGDM*
Ga0075432_101470732	3300006058	Populus Rhizosphere	MWIVMYIAMMASLRAMGLAPSFVSVRTDEDRPPFGEI*
Ga0075018_104812692	3300006172	Watersheds	MWIIWYIGMMASLRAMGLAPGVVPVRIDEDHTPYGDV*
Ga0070716_1008181002	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GRGSRAMWIVMYIAMMASLRAMGLAPSFVSVRTDEDRPPFGEI*
Ga0070716_1012573511	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AMWIVMYIAMMASLRAMGLAPNLVTVRTDEDRPPFGEI*
Ga0066653_101958731	3300006791	Soil	MWIIMYIAVMASLRAMGLAPDLVQVWTDDDHRPPYGDI*
Ga0066665_105983832	3300006796	Soil	MWIIWYVAMMASLRAMGLAPSVVPVRTDEDRTPFSDI*
Ga0066665_115624991	3300006796	Soil	MWIIMYIAVMASLQAMGLEPGLVPIRTDDDDRPPCGDI*
Ga0066659_102148352	3300006797	Soil	MWIIMYIAVMASLQAMGLEPSLVPIRTDDDDRPPCGDI*
Ga0079221_108965731	3300006804	Agricultural Soil	MWIIWYVAMMASPSAMGLAPSVVPVRTDEDRTPFSDT*
Ga0075428_1001196372	3300006844	Populus Rhizosphere	MWIIWYIGMMASLRAMGLAPSLVPIRTDEDRKPYGDM*
Ga0075425_1000547522	3300006854	Populus Rhizosphere	MWIIMYIAMVASLRAMGLSPSMVPVRTDEDRPPFGDI*
Ga0075425_1027281002	3300006854	Populus Rhizosphere	WAMWIIWYIGMMASLRAMGLAPGVVPVRIDEDRKPYGDF*
Ga0075425_1030049071	3300006854	Populus Rhizosphere	MWIIMYIAMVASLRAMGLSPSMVPVRTDEDRPPFG
Ga0075436_1003900842	3300006914	Populus Rhizosphere	MWIIWYIGMMASLRAMGLAPSPVLMRTDEDRKPYGDF*
Ga0081244_15043552	3300006939	Tropical Rainforest Soil	MWIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF*
Ga0075435_1004409802	3300007076	Populus Rhizosphere	MWIIWYVAMMASLRAMGLAPSPVLMRTDEDRKPYGDF*
Ga0099791_100570272	3300007255	Vadose Zone Soil	MWIIWYIGMMASLRAMGLAPDVVPVRIDEDHTPYGDV*
Ga0114129_108202871	3300009147	Populus Rhizosphere	MWIIWYIGMMASLRAMGLAPSPVLMRTDEDRKPYGGF*
Ga0075423_103404281	3300009162	Populus Rhizosphere	MWIVMYIAMMASLRAMGLAPSFVPVRTDEDRPPFGEI*
Ga0126374_107025751	3300009792	Tropical Forest Soil	MWIIWYIGMMASLRAMGLAPSPVPVRIDEDRKPYGDF*
Ga0126374_107251851	3300009792	Tropical Forest Soil	MWIIIYIAMVASMRAMGLAPSLVSVRTDEDRPPFGDI*
Ga0126384_102121542	3300010046	Tropical Forest Soil	MWIIWYVAMMASLRAMGLAPSPVPVRTDEDRTPYGDI*
Ga0126384_104514292	3300010046	Tropical Forest Soil	MWIIWYVAMMASLRAMGLAPIAVPVRTDEDRTPFSDI*
Ga0126384_109994811	3300010046	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPDPVPVRIDEDRTPYGDI*
Ga0126384_111673871	3300010046	Tropical Forest Soil	MWIIWYIGMMASLRAMGLAPSPVLVRTDEDRKPYGDL*
Ga0126382_100133602	3300010047	Tropical Forest Soil	MWIIWYVAMMASLRAMGLAASPVPVRTDEDRTPYGDI*
Ga0099796_103400753	3300010159	Vadose Zone Soil	MWIVMYIAMMASLRAMGLAPNLVTVRTDEDRPPFGEI*
Ga0134084_100146862	3300010322	Grasslands Soil	MWIIMYIAVMASLQAMGLEPSLVPIRTDDDHRPPYGDI*
Ga0134086_103075811	3300010323	Grasslands Soil	RAMWIIWYIGMMASLRAMGFAPNLLPIRTDEDRKPFGDM*
Ga0126370_113145502	3300010358	Tropical Forest Soil	GDWAMWIIWYVAMMASLRAMGLAPIAVPVRTDEDRTPFSDI*
Ga0126376_103025172	3300010359	Tropical Forest Soil	MWIIWYVAMMASLRAMGLAPIAVPVRTDEERTPFSDI*
Ga0126376_128511832	3300010359	Tropical Forest Soil	MWIIWYIGMMASLRAMGLAPSPVPGIDEDRTPYGDV*
Ga0126372_102963051	3300010360	Tropical Forest Soil	MWIIWYIGMMASLRAMGLAPGMVPVRINEDRKPYGDF*
Ga0126372_105617762	3300010360	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPSPVPVRIDEDRKPYGDL*
Ga0126372_118771382	3300010360	Tropical Forest Soil	MWIIWYVAMMASLRAMGLAPSPLPVRIDEERKPYGDF*
Ga0126378_109379172	3300010361	Tropical Forest Soil	MWIIWYIGMMASLRAMGLAPSLVPIKIDEDRKPFG
Ga0126378_115912531	3300010361	Tropical Forest Soil	MWIIWYVAIMASLRAMGLAPIAVPVRTDEDRAPFSDI*
Ga0126379_104955262	3300010366	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPSAVPVRTDEDRKPYGEF*
Ga0126379_119539173	3300010366	Tropical Forest Soil	IIWYIGMMASLRAMGLAPSLVPIKIDEDRKPFGDM*
Ga0126379_129826881	3300010366	Tropical Forest Soil	MWIIMYIAMVASMRAMGLAPSVVPVRTDEDRPPFGEI*
Ga0126381_1004870352	3300010376	Tropical Forest Soil	MWIIWYVGMMASLRAMGLAPSLVPIKIDEDRKPFGDM*
Ga0126383_110594761	3300010398	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPSPVPMRTDEDLTPFTDI*
Ga0124850_11208762	3300010863	Tropical Forest Soil	SIGGWAMWIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF*
Ga0124850_11346322	3300010863	Tropical Forest Soil	VVGFAGDGAMWIIWYIGMMASLRAMGLAPSLVPIKIDEDRKPFGDM*
Ga0151489_17141481	3300011106	Soil	MWIIWYIGMMASLRAMGLAPGVVPVRTDEDRTPYGDV*
Ga0120191_100179781	3300012022	Terrestrial	MWIIWYIGMMASLRAMGLAPNLVPIRTDEDRTPFGDV*
Ga0137364_102088842	3300012198	Vadose Zone Soil	MWIIWYIGMMASLRAMGFAPNLVPIRTDEDRKPFGDM*
Ga0137383_101186012	3300012199	Vadose Zone Soil	MWIIMYIAVMASLQAMGLEPSLVPVRTDDDDRPPCGDI*
Ga0137383_103014352	3300012199	Vadose Zone Soil	MWIIWYVAMVASLRAMGLAPSVVPVRTDEDRTPFSDI*
Ga0137376_101895772	3300012208	Vadose Zone Soil	MWIIMYIAMVASMRAMGLAPSVVPVRIDEDRPPFGEM*
Ga0137366_102129112	3300012354	Vadose Zone Soil	MWIIWYVAMVASLRATGLAPSVVPVRTDEDRTPFSDI*
Ga0137369_102987921	3300012355	Vadose Zone Soil	MWIIWYIGMMASLRAMGLAPSLVPIRTDEDRTPFGDV*
Ga0137361_113244461	3300012362	Vadose Zone Soil	IWYVAMMASLRAMGIAPSPVPVRTDEDRKPYGDF*
Ga0126375_112134702	3300012948	Tropical Forest Soil	GDWAMWIIWYVAMVASLRAMGLAPSPVPVRTDEDRTPFTDI*
Ga0164300_105257222	3300012951	Soil	MWIIWYIGMMASLRALGLAPGVVPVWIDEDRKPYGDF*
Ga0164304_105059662	3300012986	Soil	MWIIWYIGMMASLRALGLAPGVVPVRIDEDRKPYGDF*
Ga0132257_1039053131	3300015373	Arabidopsis Rhizosphere	MWIIWYIGMMASLRAMGLAPGVVPVRTDEARKPYGDF*
Ga0132255_1001418785	3300015374	Arabidopsis Rhizosphere	DRAMWIIMYIAMVASLRAMGLSPSMVPVRTDEDRPPFGDI*
Ga0182035_102292251	3300016341	Soil	MWIIWYIGMMASLRAMELAPSLVPVKIDEDRKPFCDM
Ga0182034_105503692	3300016371	Soil	MWIIWYVAMMASLRAMGLAPIAVPVRTDDERTPFSDI
Ga0066655_100694352	3300018431	Grasslands Soil	MWIIMYIAVMASLRAMGLAPDLVQVRTDDDHRPPYGDI
Ga0066667_104357461	3300018433	Grasslands Soil	MWIIWYIGMMASLRAMGFAPNLQPIRTDEDRKPFCDM
Ga0066662_114646372	3300018468	Grasslands Soil	MWIIMYIAVMASLQAMGLEPSLVPIRTDDDDRPPCGDI
Ga0066662_119002442	3300018468	Grasslands Soil	MWIIWYVAMMASLRAMGLAPSVVPVRTDEDRTPFSDI
Ga0210407_112260582	3300020579	Soil	MWIIMYVAMIASLRAMGLAPSSVPVRTDDDHRPPFGEI
Ga0210399_103804082	3300020581	Soil	MWIIWYIGMMASLRAMGLAPGVVLVRTDEDRKPYGDF
Ga0210399_104925181	3300020581	Soil	MWIVMYIAMMASLRAMGLAPNLATVRTDEDRPPFGEV
Ga0210406_112897271	3300021168	Soil	MWIIWYIGMMASLRAMGLAPSPLPVRIDEDRTPYGDV
Ga0210408_103007302	3300021178	Soil	WAMWIIWYIGMMASLRAMGLAPSPLPVRIDEDRTPYGDV
Ga0213879_100052931	3300021439	Bulk Soil	MWIIWYIGMMASLRAMGLAPSVVPVRIDEDRKPYGDF
Ga0126371_106429432	3300021560	Tropical Forest Soil	MWIIWYVAMMASLRAMGLAPIAVPVRTDEERTPFSDI
Ga0126371_114746432	3300021560	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPSPVPVRTDEDRTPFTDI
Ga0126371_120685561	3300021560	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPSPVPVRIDEDRKPYGDF
Ga0126371_122025332	3300021560	Tropical Forest Soil	MWIIMYIAMVASMRAMGLAPSLVPVRTDEDRPPFGDI
Ga0126371_124856431	3300021560	Tropical Forest Soil	MWIIWYIGMMASLRAMGLAPSPVLVRTDEDRKPYGDL
Ga0126371_128897802	3300021560	Tropical Forest Soil	AMWIIMYIAMVASLRAMGLAPSMVPVRTDEDRPPFGEI
Ga0179589_104233802	3300024288	Vadose Zone Soil	MWIIWYIGMMASLRAMGLAPGVVPVRIDEDHTPYGDV
Ga0207692_110365292	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	IVMYIAMMASLRAMGLAPGFVPVRTDEDRPPFGEI
Ga0207665_113681552	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VRPGTRAMWIVMYIAMMASLRAMGLAPNLVTVRTDEDRPPFGEI
Ga0209240_10046623	3300026304	Grasslands Soil	MWIIWYIGMMASLRAMGLAPDVVPVRIDEDHTPYGDV
Ga0209239_10159433	3300026310	Grasslands Soil	MWIIWYIGMMASLRAMGLAPSPVPVRIDEDRTPYGDV
Ga0209239_10506562	3300026310	Grasslands Soil	MWIIWYIGMMASLRAMGFAPNLLPIRTDEDRKPFGDM
Ga0209266_11756371	3300026327	Soil	MWIIMYIAVMASLRAMGLAPDLVQVRTDDDHRPPYG
Ga0209378_11094782	3300026528	Soil	MWIIWYIGMMASLRTMGLAPGVVPVRIDEDRKPYGDF
Ga0209056_101660271	3300026538	Soil	MWIIMYIAVMASLQAMGLEPGLVPIRTDDDDRPPCGDI
Ga0209474_100229162	3300026550	Soil	MWIIMYIAMVASLRAMGLAPSMVPVRTDEDRPPFGEI
Ga0209523_10402911	3300027548	Forest Soil	MWIIWYIGMMASLRAMGLAPGVVPVRTDEDRKPYGDF
Ga0209466_10017832	3300027646	Tropical Forest Soil	MWIIWYVAMVASLRAMGLAPSPVPVRTDEDRKPYGDF
Ga0209465_101213502	3300027874	Tropical Forest Soil	MWIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF
Ga0209465_104360491	3300027874	Tropical Forest Soil	MWIIWYIGMMASLRAMGLAPSPVLVRTDEDRKPYGDF
Ga0209488_108435772	3300027903	Vadose Zone Soil	MWIIMYIAMVASMRAMGLAPSVVPVRTDEDRPPFGEM
Ga0307307_100401712	3300028718	Soil	MWIVMYIAMMASLRAMGMAPGFVPVRTDEDRPPFGEI
Ga0307277_100000143	3300028881	Soil	MWIVMYIAMMASLRAMGLAPSFVPVRTDEDRPPFGEI
Ga0318516_100604413	3300031543	Soil	WIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF
Ga0318516_101808402	3300031543	Soil	MWIIWYVAMMASLRAMGLAPSPVLVRTDEDRKPYGDF
Ga0318516_104241982	3300031543	Soil	GGWAMWIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF
Ga0318534_101064472	3300031544	Soil	MWIIWYVAMVASLRAMGLAPDPVPVRIDEDRTPYGDI
Ga0318541_101389662	3300031545	Soil	MWIIWYIGMMASLRAMGLAPSLVPVKIDEDRKPFGDM
Ga0318541_102091412	3300031545	Soil	MWIIWYVAMVASLRAMGLAPDPVPVRIDEDRTPYG
Ga0318541_105119811	3300031545	Soil	WAMWIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF
Ga0310915_100293762	3300031573	Soil	VWIIWYIGMMASLRAMGLAPSLVPVKIDEDRKPFGDM
Ga0310915_101070942	3300031573	Soil	MWIIWYIGMMASLRAMGLAPSPVPIRTDENRKPYGDF
Ga0318500_103338972	3300031724	Soil	IIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF
Ga0306918_103111381	3300031744	Soil	AMWIIWYVAMMASLRAVGLAPNPVPVRIDEDRKPYGDF
Ga0306918_107070782	3300031744	Soil	MWIIWYVAMVASLRAMGLAPSPLPVRTDEDRTPFTDI
Ga0318521_104719882	3300031770	Soil	DGAMWIIWYIGMMASLRAMGLAPSLVPVKIDEDRKPFGDM
Ga0318503_101185482	3300031794	Soil	AMWIIWYIGMMASLRAMGLAPSPVPVRIDEDRKPYGDF
Ga0318512_102816211	3300031846	Soil	GLIRGDWAMWIIWYIGMMASLRAMGLAPGVVPVRTDEERKPYGDF
Ga0318536_101880902	3300031893	Soil	MWIIWYIGMMASLRAMGLAPGVVPVRTDEDRTPYGDV
Ga0306921_124530151	3300031912	Soil	AMWIIWYIGMMASLRAVGLAPSPVPIRTDEDRKPYGDF
Ga0310912_112486821	3300031941	Soil	MWIIWYVAMVASLRAMGLAPSPVPVRIDEDRKPYGDLLV
Ga0306926_124513741	3300031954	Soil	WAMWIIWYIGMMASLRAVGLAPSPVPIRTDEDRKPYGDF
Ga0306922_110112492	3300032001	Soil	MWIIWYVAMMASLRAVGLAPNPVPVRMDEDRKPYGDF
Ga0306922_112337921	3300032001	Soil	MWIIWYVAMVASLRAMGLAPSPVPVRIDEDRKPYGD
Ga0318570_100621741	3300032054	Soil	MWIIWYVAMVASLRAMGLAPSPLPVRTDEDRTPFT
Ga0306924_117038971	3300032076	Soil	MWIIWYIGMMASLRAVGLAPSPVPIRTDEDRKPYGDF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039802

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences