Metagenome / Metatranscriptome Family F039780

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039780
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	44 residues
Representative Sequence	MRIRVTTRADLFEKRKQQHIERGYRIEDERPIPVNGFCSFVA
Number of Associated Samples	138
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.06 %
% of genes near scaffold ends (potentially truncated)	88.34 %
% of genes from short scaffolds (< 2000 bps)	87.12 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.252 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.110 % of family members)
Environment Ontology (ENVO)	Unclassified (28.221 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.785 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 24.29% Coil/Unstructured: 61.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF04098	Rad52_Rad22	4.91
PF06414	Zeta_toxin	3.68
PF12686	DUF3800	3.07
PF13470	PIN_3	1.23
PF00899	ThiF	1.23
PF13659	Obsolete Pfam Family	1.23
PF01850	PIN	1.23
PF00144	Beta-lactamase	1.23
PF09970	DUF2204	1.23
PF02308	MgtC	0.61
PF08840	BAAT_C	0.61
PF07854	DUF1646	0.61
PF02738	MoCoBD_1	0.61
PF10130	PIN_2	0.61
PF08448	PAS_4	0.61
PF05988	DUF899	0.61
PF00436	SSB	0.61
PF00589	Phage_integrase	0.61
PF02661	Fic	0.61
PF04542	Sigma70_r2	0.61
PF13493	DUF4118	0.61
PF04343	DUF488	0.61
PF00583	Acetyltransf_1	0.61
PF08281	Sigma70_r4_2	0.61
PF13489	Methyltransf_23	0.61
PF08843	AbiEii	0.61
PF00106	adh_short	0.61
PF00072	Response_reg	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.23
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.23
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.23
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.61
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.61
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.61
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.61
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.61
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.61
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.61
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.61
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.61
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.61
COG4756	Predicted cation transporter	General function prediction only [R]	0.61
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.25 %
Unclassified	root	N/A	6.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.25 %
Unclassified	root	N/A	6.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.25 %
Unclassified	root	N/A	6.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.91 %
Unclassified	root	N/A	6.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	55.21 %
Unclassified	root	N/A	6.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.29 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	2.45 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.21 %
Unclassified	root	N/A	6.75 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.29 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	2.45 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.61 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.21 %
Unclassified	root	N/A	6.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.29 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	2.45 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.21 %
Unclassified	root	N/A	6.75 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	2.45 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.61 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.61 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.21 %
Unclassified	root	N/A	6.75 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	2.45 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.61 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	0.61 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101535620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2945	Open in IMG/M
3300000567\|JGI12270J11330_10007719	All Organisms → cellular organisms → Bacteria	7403	Open in IMG/M
3300001131\|JGI12631J13338_1021866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300001546\|JGI12659J15293_10009811	All Organisms → cellular organisms → Bacteria → Acidobacteria	2704	Open in IMG/M
3300004092\|Ga0062389_101475636	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300004152\|Ga0062386_101822240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005167\|Ga0066672_10406691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300005436\|Ga0070713_101065794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300005437\|Ga0070710_10109517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1657	Open in IMG/M
3300005467\|Ga0070706_101685283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005468\|Ga0070707_100518832	Not Available	1154	Open in IMG/M
3300005471\|Ga0070698_102172659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005542\|Ga0070732_10099784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1710	Open in IMG/M
3300005545\|Ga0070695_101379226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005614\|Ga0068856_100631419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300006047\|Ga0075024_100613807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300006057\|Ga0075026_100762605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300006086\|Ga0075019_10886720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300006162\|Ga0075030_100792724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300006162\|Ga0075030_101127292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300006173\|Ga0070716_100763102	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300006175\|Ga0070712_101384477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300006176\|Ga0070765_101790705	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006796\|Ga0066665_11622246	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300009038\|Ga0099829_10911521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300009088\|Ga0099830_10935636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300009522\|Ga0116218_1217617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300009640\|Ga0116126_1190264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300009644\|Ga0116121_1235106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300009683\|Ga0116224_10492885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300009700\|Ga0116217_10891662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300009839\|Ga0116223_10331387	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300009839\|Ga0116223_10550395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300010043\|Ga0126380_10037752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2507	Open in IMG/M
3300010048\|Ga0126373_11784550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300010048\|Ga0126373_12609544	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010339\|Ga0074046_10558880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300010341\|Ga0074045_10001239	All Organisms → cellular organisms → Bacteria	24890	Open in IMG/M
3300010359\|Ga0126376_11169000	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300010379\|Ga0136449_100472675	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300010396\|Ga0134126_12959736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010398\|Ga0126383_11264877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300011269\|Ga0137392_11399050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300011271\|Ga0137393_10150685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1942	Open in IMG/M
3300012203\|Ga0137399_11640401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300012209\|Ga0137379_10203524	All Organisms → cellular organisms → Bacteria → Acidobacteria	1893	Open in IMG/M
3300012210\|Ga0137378_10221390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1762	Open in IMG/M
3300012210\|Ga0137378_10910881	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300012354\|Ga0137366_10682666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300012361\|Ga0137360_10489575	Not Available	1046	Open in IMG/M
3300012362\|Ga0137361_10347108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300012362\|Ga0137361_11917915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300012917\|Ga0137395_10433314	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300012922\|Ga0137394_11015059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300012923\|Ga0137359_10652913	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300012923\|Ga0137359_11186742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300012923\|Ga0137359_11257707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300012923\|Ga0137359_11444354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300012923\|Ga0137359_11584973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012975\|Ga0134110_10057385	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300012989\|Ga0164305_11864852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	545	Open in IMG/M
3300013104\|Ga0157370_11430630	Not Available	622	Open in IMG/M
3300016357\|Ga0182032_11418813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300016371\|Ga0182034_11680192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300016445\|Ga0182038_11881942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300017927\|Ga0187824_10255785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300017929\|Ga0187849_1309102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300017933\|Ga0187801_10060310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1392	Open in IMG/M
3300017946\|Ga0187879_10237187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300017972\|Ga0187781_10697730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300017975\|Ga0187782_11506931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300017994\|Ga0187822_10295294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300017995\|Ga0187816_10075229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434	Open in IMG/M
3300017995\|Ga0187816_10440185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300018006\|Ga0187804_10302807	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300019082\|Ga0187852_1266682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300020580\|Ga0210403_10241466	All Organisms → cellular organisms → Bacteria → Acidobacteria	1482	Open in IMG/M
3300020580\|Ga0210403_11335314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300020583\|Ga0210401_10248096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1640	Open in IMG/M
3300020583\|Ga0210401_10547972	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300020583\|Ga0210401_10945071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300021168\|Ga0210406_10298315	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1311	Open in IMG/M
3300021178\|Ga0210408_10904094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300021181\|Ga0210388_10870524	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300021181\|Ga0210388_11619951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300021402\|Ga0210385_10524635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300021406\|Ga0210386_11021575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300021432\|Ga0210384_11854986	Not Available	508	Open in IMG/M
3300021433\|Ga0210391_10787148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300021560\|Ga0126371_13424283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300022733\|Ga0224562_1000973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1925	Open in IMG/M
3300025134\|Ga0207416_1127268	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300025459\|Ga0208689_1015686	All Organisms → cellular organisms → Bacteria → Acidobacteria	2211	Open in IMG/M
3300025612\|Ga0208691_1068444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300025898\|Ga0207692_10804391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300025913\|Ga0207695_10554258	Not Available	1031	Open in IMG/M
3300025922\|Ga0207646_10397827	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300025928\|Ga0207700_11955791	Not Available	513	Open in IMG/M
3300026480\|Ga0257177_1043117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300026490\|Ga0257153_1094710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300026515\|Ga0257158_1106598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300026532\|Ga0209160_1161054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300026551\|Ga0209648_10569589	Not Available	629	Open in IMG/M
3300026552\|Ga0209577_10008017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9696	Open in IMG/M
3300027625\|Ga0208044_1149034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300027629\|Ga0209422_1014721	All Organisms → cellular organisms → Bacteria → Acidobacteria	1933	Open in IMG/M
3300027648\|Ga0209420_1100263	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300027684\|Ga0209626_1121217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300027684\|Ga0209626_1142904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300027767\|Ga0209655_10306640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300027821\|Ga0209811_10324362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300027825\|Ga0209039_10118140	All Organisms → cellular organisms → Bacteria → Acidobacteria	1124	Open in IMG/M
3300027842\|Ga0209580_10268965	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300027842\|Ga0209580_10577160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300027846\|Ga0209180_10601703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300027862\|Ga0209701_10077487	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300027875\|Ga0209283_10073278	Not Available	2208	Open in IMG/M
3300027875\|Ga0209283_10171216	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300027908\|Ga0209006_10876547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300027910\|Ga0209583_10739616	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300027911\|Ga0209698_10319980	All Organisms → cellular organisms → Bacteria → Acidobacteria	1225	Open in IMG/M
3300028673\|Ga0257175_1052670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	748	Open in IMG/M
3300029817\|Ga0247275_1143462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300029943\|Ga0311340_11607386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300029944\|Ga0311352_10822287	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300029982\|Ga0302277_1138951	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300029999\|Ga0311339_10015062	All Organisms → cellular organisms → Bacteria → Acidobacteria	11837	Open in IMG/M
3300030659\|Ga0316363_10007702	All Organisms → cellular organisms → Bacteria	6735	Open in IMG/M
3300030659\|Ga0316363_10203330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300030706\|Ga0310039_10191246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300030707\|Ga0310038_10438123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300030879\|Ga0265765_1062783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	527	Open in IMG/M
3300031057\|Ga0170834_103434335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300031236\|Ga0302324_100058911	All Organisms → cellular organisms → Bacteria → Acidobacteria	6828	Open in IMG/M
3300031241\|Ga0265325_10081046	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300031715\|Ga0307476_10472488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300031754\|Ga0307475_10263797	All Organisms → cellular organisms → Bacteria → Acidobacteria	1381	Open in IMG/M
3300031781\|Ga0318547_10850971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300031820\|Ga0307473_11011615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300031823\|Ga0307478_10652110	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300031859\|Ga0318527_10500795	Not Available	518	Open in IMG/M
3300032261\|Ga0306920_103004062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300032770\|Ga0335085_10229513	All Organisms → cellular organisms → Bacteria → Acidobacteria	2248	Open in IMG/M
3300032783\|Ga0335079_10417244	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300032783\|Ga0335079_10570376	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1198	Open in IMG/M
3300032805\|Ga0335078_10050653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6139	Open in IMG/M
3300032805\|Ga0335078_10188005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2882	Open in IMG/M
3300032805\|Ga0335078_10711937	All Organisms → cellular organisms → Bacteria → Acidobacteria	1242	Open in IMG/M
3300032828\|Ga0335080_10183970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2303	Open in IMG/M
3300032828\|Ga0335080_10223538	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	2064	Open in IMG/M
3300032828\|Ga0335080_10673267	All Organisms → cellular organisms → Bacteria → Acidobacteria	1081	Open in IMG/M
3300032892\|Ga0335081_10844949	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1087	Open in IMG/M
3300032892\|Ga0335081_11296418	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300032892\|Ga0335081_12706076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300032895\|Ga0335074_11083324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300032896\|Ga0335075_11266853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300032897\|Ga0335071_10246365	All Organisms → cellular organisms → Bacteria → Acidobacteria	1740	Open in IMG/M
3300032898\|Ga0335072_11300223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300033004\|Ga0335084_10142435	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300033134\|Ga0335073_11347371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300033887\|Ga0334790_109147	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.55%
Host-Associated	Host-Associated	2.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.21%
Aquatic	Environmental → Aquatic	15.34%
Plants	Host-Associated → Plants	2.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.53%
Freshwater	Environmental → Aquatic → Freshwater	10.43%
Sediment	Environmental → Aquatic → Sediment	4.29%
Peat	Environmental → Terrestrial → Peat	3.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.84%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.50%
Loam	Environmental → Terrestrial → Soil → Loam	12.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.23%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.29%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.23%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.04%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.07%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.23%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.23%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.61%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.61%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015356206	3300000364	Soil	MRIVMRIRVTMKADLFEERKRQHIQRGHRIEDERP*
JGI12270J11330_100077197	3300000567	Peatlands Soil	MAMRIRVTTRADLFEERKQQHIERGYRIEDERPVPVDGLCSFIAVSEIAD*
JGI12631J13338_10218661	3300001131	Forest Soil	MRIRVTTRADLFEERKQQHIARGYRIEDERPIPVNGFCSFIAVSEISDSDGI
JGI12659J15293_100098114	3300001546	Forest Soil	MRIRVTMRADLFEERKQQHIERGYRIEDERPTPVTVFARSSPRAR*
Ga0062389_1014756361	3300004092	Bog Forest Soil	MRIRVTTKADLFEKRKQQHIERGYRIEDERPIPVNGLCSFIAV
Ga0062386_1018222401	3300004152	Bog Forest Soil	MRNEVAMRIRVTTRADLFEERKQQHIERGYRIEDERPIPVNGLCSFIAVREEP
Ga0066672_104066911	3300005167	Soil	MRILVTTRADLFEERKRQHLERGWRIEDERPIPINGLCSFVAVRDMP
Ga0070713_1010657941	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVTTRANLYEKRKQEHIERGYRIEDERPISVNGFCSFI
Ga0070710_101095171	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVSTRAELFEKRKQEHIERGYRVEDERPIPVNGFCSF
Ga0070706_1016852832	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVTTRADLFEKRKQQHIERGYRIEDERPIPVNGFCSFVA
Ga0070707_1005188322	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVTTRADLFEERKQQHIERGYGIEDERPIPVNGFCSFVAVREISAAD
Ga0070698_1021726591	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVTTRADLYEKRKQEHIERGYRVEDERPIPVNGFCSF
Ga0070732_100997843	3300005542	Surface Soil	MRIRVTTRADLFEKRKKEHIERGYRIEDERPVPVNGFCSFIA
Ga0070695_1013792261	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVTTRAELYEKRKQEHIERGYRIEEERAIPVNGFCSFTV
Ga0068856_1006314191	3300005614	Corn Rhizosphere	MRIRVTTRADLYEQRKREHIDRGYRIEDERPSPVNGFSSFIAVR
Ga0075024_1006138072	3300006047	Watersheds	MRIRVITRAALFEECKRQHIERDYRIEDERPIPVNGLCSFIAVR
Ga0075026_1007626052	3300006057	Watersheds	MRIRVTTRTDLFEERKQQHIKRGYRIEDERPIPVNG
Ga0075019_108867202	3300006086	Watersheds	MRIRVTTRADLFEKRKQQHIGRGYRIEDERPIAVNGLCSFV
Ga0075030_1007927243	3300006162	Watersheds	MRIRVTTRADLFEKRKQEHIERGYRVEDERPIPVNGFCS
Ga0075030_1011272922	3300006162	Watersheds	MRIRVTTRADLYEKRKQEHIDRGYRIEDERPIPVNGFCCFIAVRELPASDGLTDWLLRL*
Ga0070716_1007631021	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVSTRAELFEKRKQEHIEHGYRVEDERPIPVNGFCSFTAVREPSV
Ga0070712_1013844772	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVTTRADLYEERKQQHIQRGYRIEDERPIPVNGFCSFIAM
Ga0070765_1017907051	3300006176	Soil	MRIRVTTKADLFETRKQQHIQRGYRIEDERPIPVKGLCSFIAVS
Ga0066665_116222462	3300006796	Soil	MQQRIRVTTRADQFEKRKQQFMEAGYRIDAEQAVPLNGLCSFIAVKEPPAPE*
Ga0099829_109115211	3300009038	Vadose Zone Soil	MRMVMRIRVTTRADLYEKRKQEHIERGYGIEDERPIPVNGLCSFIAMRKMPVSDTV
Ga0099830_109356361	3300009088	Vadose Zone Soil	MAMRIRVTTRADLFEKRKQQHIERGYRIEDDRPIPVNGLCSFIAVSELADSD
Ga0116218_12176171	3300009522	Peatlands Soil	MRIRVTTRAEVFEKRKQEHLERGYRVEDERPIPVNGFCSFVAVRELSV
Ga0116126_11902642	3300009640	Peatland	MAMRIRVTTRADLFEKRKQQRIERGYRIEDERPMPVTVFARSSP*
Ga0116121_12351062	3300009644	Peatland	MAMRIRVTTRADLFEERKQQHIERGYRIEDERPIP
Ga0116224_104928851	3300009683	Peatlands Soil	MAMRIRVTTRADLFEARKQQHIERGYRIEDERPTPVNGLCSFI
Ga0116217_108916621	3300009700	Peatlands Soil	MRIRVTTRADLFEERKQQHIERGYQIEDERPMPVNGLCSFIAVREEP
Ga0116223_103313871	3300009839	Peatlands Soil	MAMRIRVTTRADLFEERKQQHIERGYRIEDERPIPVNGLCSFIAVSEIAD
Ga0116223_105503951	3300009839	Peatlands Soil	MRIAMKIRVTTRADLFEERKQQHIERGYRIDDEQPIPVNGLCSFI
Ga0126380_100377524	3300010043	Tropical Forest Soil	MAMRIRVTTRANLFEKRKQEHIERGYRIEEERPIPVNGFCSFVAVRELLSDRLPTL*
Ga0126373_117845501	3300010048	Tropical Forest Soil	MRIRVTTRAHLFEERKREHIERGYRIEDERPMPVNGLCSFIAVRAVQVQDRYPHW*
Ga0126373_126095441	3300010048	Tropical Forest Soil	MALRIRVTTKRETFEERKQQHTQLGYRIEDEQPVPVNGL
Ga0074046_105588801	3300010339	Bog Forest Soil	MRNEVAMRIRVTTRAHLFEERKQQHIERGYRVEDERPIPVNGLCSFMAVK
Ga0074045_100012399	3300010341	Bog Forest Soil	MRILVTTRADLFEKRKEQHIERGYRIEDERPVPVNGLC*
Ga0126376_111690001	3300010359	Tropical Forest Soil	MAMRIRVTTKANLFEKRKQEHIERGYSIEDERPIP
Ga0136449_1004726753	3300010379	Peatlands Soil	MRIAMKIRVTTRADLFEERKQQHIERGYRIDDEQPIPVNGLCSFIAVKEELASD
Ga0134126_129597362	3300010396	Terrestrial Soil	MRIRVTTTADLFQKRKQQHIERGYRIEEERPIAVNGFCSFVAVSEIPDS
Ga0126383_112648772	3300010398	Tropical Forest Soil	MKHIVRVITRADLFEKRKQEHIKAGYLIEDEQPIPCNNLCSFTAVWNVPDPDSE*
Ga0137392_113990502	3300011269	Vadose Zone Soil	MRMAMRILVTTRADLFEKRKQQHVERGYRIEDERPTPVNGLCSFIAVKQIPVS
Ga0137393_101506851	3300011271	Vadose Zone Soil	MVEKLRMAMRIRVTTRADLFERRKQQHIEGGYQIEDERP
Ga0137399_116404011	3300012203	Vadose Zone Soil	MRIRVTTRADLFERRKQEHIEHGYRIEDELPIPVNGLCSF
Ga0137379_102035241	3300012209	Vadose Zone Soil	MTLRIRVSTKAVNFHERKQQPIEIGYRIEDERTIPVNGLCSFI
Ga0137378_102213901	3300012210	Vadose Zone Soil	MRIRVTTRADLYEKRKQEHGERGYRIEEERPIPVNGFCSFVAVRELPASDTLADL
Ga0137378_109108811	3300012210	Vadose Zone Soil	MRIRVTTRADLFEERKQQHIDRGYRIEDERPIPVNGFCSFIATREAPVSDALG
Ga0137366_106826663	3300012354	Vadose Zone Soil	MRIRVTTRADLFEERKRQHIERGYRIEDERPIAVNGLCSFIAVSEI
Ga0137360_104895751	3300012361	Vadose Zone Soil	MRMAMRIRVTTRADLFEKRKHEHIECGYRVEDERPIPVNGLCSFIAIRE
Ga0137361_103471081	3300012362	Vadose Zone Soil	MRIRVTTKADLFEQRKQQHIERGYRIEDERPIPVNGLCSFVVKELSP
Ga0137361_119179152	3300012362	Vadose Zone Soil	MRMVMRIRVTTRADLYEKRKQEHIERGYRIEDERPIPVNGL
Ga0137395_104333141	3300012917	Vadose Zone Soil	MVEKLRMAMRIRVTTRADLFEKRKQQHIERGYRIEDEQPIPVNGLCSFVAVGELPASD
Ga0137394_110150592	3300012922	Vadose Zone Soil	MRMAMRILVTTRADLFEKRKQQHVERGYRIEDERP
Ga0137359_106529133	3300012923	Vadose Zone Soil	MAMRICVTTRADLFEERKRQHIERGYRIEDERPIAVNGLCSFI
Ga0137359_111867421	3300012923	Vadose Zone Soil	MRIRVTTKAHLFEQRKQQHIERGYRIEDERPIPVNGLCSFVAVREI
Ga0137359_112577071	3300012923	Vadose Zone Soil	MRMAMRILVTTRADLFEKRKQQHVERGYRIEDERPTPVNGLCSFIA
Ga0137359_114443541	3300012923	Vadose Zone Soil	MRIVMRIRVTTRADLFEKRKQQHIERGYAIEDERPIPVNGFCSFVAVREISAADSLG
Ga0137359_115849731	3300012923	Vadose Zone Soil	MAMRIRVTMRADLFEERKQQHIERGYRIEDERPTPVNG
Ga0134110_100573851	3300012975	Grasslands Soil	MRIVMRIRVTTRADLFEKRKQQHIERGYGIEDERPIPVNG
Ga0164305_118648521	3300012989	Soil	MRIRVTTTADLFQKRKQQHIERGYRIEEERPIAVN
Ga0157370_114306301	3300013104	Corn Rhizosphere	MVMRIRVTTRADLYEQRKREHIDRGYRIEDERPSPVNGFSSFIAVRELSV
Ga0182032_114188131	3300016357	Soil	MRILVTTRADLFEERKQQRIERGYRIEGERRIAINGL
Ga0182034_116801921	3300016371	Soil	MRIRVTTRAQLFEERKREHIERGYRIEDERPIPVNGLCSFIAVRDLQVQDTL
Ga0182038_118819422	3300016445	Soil	MRIRVTTKANLYEKRKQEHTERGYRIEDERPIPVNGF
Ga0187824_102557851	3300017927	Freshwater Sediment	MRIRVTTRADLFEERKRQHIERGYRIEDERPIPSNGFCSFIAVS
Ga0187849_13091022	3300017929	Peatland	MRIRVTTRADLYEKRKQQHIERGYRIEDERPIPVNG
Ga0187801_100603102	3300017933	Freshwater Sediment	MRIRVTTRAHLYERREQQHIERGYQIEDERPIPVNGFCSF
Ga0187879_102371872	3300017946	Peatland	MRIRVTTKTDLFEKRKQQHIERGYRIEDEQPIPTNGLCSFIAVSEI
Ga0187781_106977301	3300017972	Tropical Peatland	MRILVTTRADLFEERKQQHIERGYRIEDERPVPVNGLCSFIAVSEIADSGG
Ga0187782_115069311	3300017975	Tropical Peatland	MRIRVTTRAHLFEERKREHIERGYRIEDERPIPVNGMC
Ga0187822_102952941	3300017994	Freshwater Sediment	MRIRVTTRANLYEKRKQEHIERGYRIEDERPIPVNGFCSFIAVRELSVSD
Ga0187816_100752291	3300017995	Freshwater Sediment	MRIRVTTRADLFEKRKQEHIERGYRVEDERPTPVNGFC
Ga0187816_104401853	3300017995	Freshwater Sediment	MRIRVTTRADLLEERKQQHIERGYRIEDERPIPVNGFCSF
Ga0187804_103028073	3300018006	Freshwater Sediment	MAMRIRVTTKADLFEERKQQHIKRGYRIEDERPIPV
Ga0187852_12666821	3300019082	Peatland	MKIRVTTRADLFEKRKQQHIERGYRIEDERPIPVN
Ga0210403_102414662	3300020580	Soil	MRIRVTTRAALFEQRKLQLVERGYRIEDERPTPVNEMC
Ga0210403_113353142	3300020580	Soil	MRIRVTTRAELFEKRKQQLIERGYRIEDERPIPVNGLCSFVAVTEIP
Ga0210401_102480964	3300020583	Soil	MRIRVTTRTDLFEERKRQHIERGYRIEDERPTPVNGLCSFIAVSEIP
Ga0210401_105479723	3300020583	Soil	MKIRVTTRADLFEKRKQQHIDRGYQIEDERPIPVNGL
Ga0210401_109450712	3300020583	Soil	MRIRVTTRADLFEKRKKEHIERGYRIEDERPVPVNGFCSFIAVRELSISD
Ga0210406_102983151	3300021168	Soil	MRIRVTTRVELFEERKRQHIARGYRIEDELPIPMNGFCSFVAVSEIR
Ga0210408_109040942	3300021178	Soil	MRIRVSSRTDLFEKRKQQHIERGYRIEDERPIPVNGLCSFVAVTELP
Ga0210388_108705243	3300021181	Soil	MRIHVTTRADLFELRKRQHTERGFRIEDERPKPVNGLCSFVAVRDTPIQDPIA
Ga0210388_116199511	3300021181	Soil	MRIRVTTRADLYEKRKQEHIERGYRIEDERPIPVNGFC
Ga0210385_105246353	3300021402	Soil	MRIRVTTRADLFEERKQQHIARGYRIEDERPIPVNGFCSFIAVSEISDSD
Ga0210386_110215751	3300021406	Soil	MRIRVTTRTDLFEERKRQHLERGYRIEDERPTPVNGLCSFIAVSE
Ga0210384_118549862	3300021432	Soil	MRIRVTTRVDLYEKRKQEHIERGYRVEEERPTPVN
Ga0210391_107871481	3300021433	Soil	MRIRVSSRADLFEKRKQQHIERGYRIEDERPIPVNGFCSFIAV
Ga0210398_107965621	3300021477	Soil	MRMAMRIRVTTRADLFEQRKQQHIERGYRIEDEQPTPMNGLCSFIAVQDPADSDPI
Ga0126371_134242831	3300021560	Tropical Forest Soil	MRVRVTTRADLFEERKRQHIQRGYRIEDEQPKPVNGLCSFVAVEESAERDLLA
Ga0224562_10009731	3300022733	Soil	MVVRIRVTTKTDLFEKRKQQHIERGYRIEDEQPIPVNGLC
Ga0207416_11272681	3300025134	Iron-Sulfur Acid Spring	MRNVMRIRVATKAALFEERKQQHIARGYRIEDERPIPVNGLC
Ga0208689_10156861	3300025459	Peatland	MRIRVTTRVDLFEERKQQHIERGYRIEDERPIPVNGLCSFIAVSEIP
Ga0208691_10684443	3300025612	Peatland	MRIRVTTRADLFEERKQQHIARGYRIEDERPIPVNGFCSFI
Ga0207692_108043911	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRVSTRAELFEKRKQEHIERGYRVEDERPIPVNGF
Ga0207695_105542582	3300025913	Corn Rhizosphere	MRIRVTTRADLFEERKQQHIERGYGIEDERPIPVN
Ga0207646_103978271	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MALRIRVSTKAAAFEERKQQHIQLGYQIEDERPLPVNG
Ga0207700_119557912	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSMRIRVTTKASCFEERKEQHARVGYRIEDEQPFPV
Ga0257177_10431172	3300026480	Soil	MRIRVTARADLYEKRKQEHIERGYRIEDERPIPVNGLCSFIAMRKMPVSD
Ga0257153_10947102	3300026490	Soil	MRIRVTTRADLFEKRKQQHIERGYRIEDERPIPVNG
Ga0257158_11065982	3300026515	Soil	MRIRVTTRADLFEKRKQEEHIERGYRIEDERPIPVNGFC
Ga0209160_11610541	3300026532	Soil	MRILVTTRADLFEERKRQHLERGWRIEDERPIPINGLCSFVAVRDMPVFRRIGGT
Ga0209648_105695892	3300026551	Grasslands Soil	MRIRVTTRADLFEKRKQEHIERGYRVEDERPIPVNGLCSFIAVSEIP
Ga0209577_100080171	3300026552	Soil	MRILVTTRADLFEERKRQHLERGWRIEDERPIPINGLCSFVAVRDMPVFRRIGGTGRA
Ga0208044_11490341	3300027625	Peatlands Soil	MRIRVTTRADLFEERKQQHIERGYRIEDERPVPVDGL
Ga0209422_10147211	3300027629	Forest Soil	MKIRVTTRADLYDKRRQEHIERGYRIEEERPIPVNGFCSFLAVRERAA
Ga0209420_11002631	3300027648	Forest Soil	MRIRVTTRADLFEERKQQHIARGYRIEDERPIPVNGFCSFIAVSE
Ga0209626_11212171	3300027684	Forest Soil	MRIRVTTRADLYEKRKQEHIERGYRIEDERPIPVN
Ga0209626_11429041	3300027684	Forest Soil	MRIRVTTRADLFEKRKQQHIERGYRIEDERPIPVNGFCSFIAVSEIPDSDGGG
Ga0209530_10257543	3300027692	Forest Soil	MRIRVTTRADLFEERKQQHIARGYRIEDERPIPVNGFCSFIAVSEISDSDGISDFV
Ga0209655_103066401	3300027767	Bog Forest Soil	MRIRVTTRADLFEERKQQHIGRSYRIEDERPIPVNGLCSFI
Ga0209811_103243622	3300027821	Surface Soil	MRIRVTTRADLFEERKQQHIERGYGIEDERPIPVNGFCSFVAVREISGSDTF
Ga0209039_101181401	3300027825	Bog Forest Soil	MRIRVTTRADLFEERKQQHIERGYRIEDERPIPVNGLCSFIAVS
Ga0209580_102689653	3300027842	Surface Soil	MRIRVTTRADLFEERKQQHIERGYRIEDEQPIQVNGFC
Ga0209580_105771601	3300027842	Surface Soil	MRIRVTTTAGLFEKRKQQHIARGYRIEDERPIPVNGFCSFIAVSEIPDS
Ga0209180_106017031	3300027846	Vadose Zone Soil	MRIRVTTRADLFEERKQQHVDRGYRIEDERPIPVN
Ga0209701_100774875	3300027862	Vadose Zone Soil	MRIRVTTKADLFEQRKQQHIKRGYRIEDERPIPVNGFCS
Ga0209283_100732784	3300027875	Vadose Zone Soil	MRIRVTMRANLFEERKQQHIERGYRIEDERPIPVNGLCSFIAVSEIPESDGV
Ga0209283_101712164	3300027875	Vadose Zone Soil	MTLRICVSTKAVNFHERKQQHIELGYRIEDERTIPVNGLCSFIAV
Ga0209006_108765473	3300027908	Forest Soil	MRIRVTTRTELFEERKQQHIERGYRIEDERPIPSNGFCSFIAVSEIP
Ga0209583_107396161	3300027910	Watersheds	MRIRVTTRAHLFEKRKQQHIERGYRIEDERPIPVYGLCSFIAVSE
Ga0209698_103199802	3300027911	Watersheds	MRIRVTTRADLYEKRKQEHIDRGYRIEDERPIPVNGFCCFIAVRELPASDGLTDWLLRL
Ga0257175_10526702	3300028673	Soil	MRIRVTTRADLFEERKQQHIERGYGIEDERPIPVNGFC
Ga0247275_11434623	3300029817	Soil	MRIRVTTRADLFEKRKQEHIERGYRIDNERPIPVNGFCSFIAVSEKPDSD
Ga0311340_116073861	3300029943	Palsa	MRIRVTTRADLFEERKQQHIERGYRIEDERPIPVN
Ga0311352_108222872	3300029944	Palsa	MKIRVTTRADLFEERKQQHIERGYRIEDERPIPVNGLCS
Ga0302277_11389513	3300029982	Bog	MRIRVSTRADLFEKRKQQHIERGYRIEDERPIPVNGFCSFIAVSEVPDSDGIP
Ga0311339_100150627	3300029999	Palsa	MRIAMRIRVTTKADLFDKRKQQHMERGYGIEDARPIPVNGSARSSP
Ga0316363_100077026	3300030659	Peatlands Soil	MRIRVTTRADLFEERKQQHIERGYRIEDERPVPVDGLCSFIAVSEIAD
Ga0316363_102033303	3300030659	Peatlands Soil	MRIRVTTRAEVFEKRKQEHLERGYRVEDERPIPVNGFCSFVAVRELS
Ga0310039_101912463	3300030706	Peatlands Soil	MAMRIRVTTRADLFEERKQQHIERGYRIEDERPVPVDGLCSFIAVSEIAD
Ga0310038_104381232	3300030707	Peatlands Soil	MRIRVTTRAEVFEKRKQEHLERGYRVEDERPIPVNGF
Ga0265765_10627832	3300030879	Soil	MAMRIRVTTKADLFEKRKQQHIERGYRIEDERPLPVTVSARSSL
Ga0170834_1034343351	3300031057	Forest Soil	MRIRVTTRADLFEKRKQQHVERGYRIEDERPIPVNGFCS
Ga0302324_1000589112	3300031236	Palsa	MRIAMRIRVTTKADLFDKRKQQHMEHGYGIEDARPIPVNGSARSSP
Ga0265325_100810461	3300031241	Rhizosphere	MRIRVTTRADLFEERKKQHIERGYRIEDERPTPVN
Ga0307476_104724881	3300031715	Hardwood Forest Soil	MRIRVTTRANLFEKRKQEHIERGYRIEEERPVPVNGFCSFIAVR
Ga0307475_102637971	3300031754	Hardwood Forest Soil	MAMRIRVTTRADLFEERKQQHIERGYRIEDERPIPVNGFC
Ga0318547_108509711	3300031781	Soil	MRIRVTTRASLFEERKRQHIERGYRIEDEEPVPVN
Ga0307473_110116152	3300031820	Hardwood Forest Soil	MRIRVTTRANLFEERKRQHIERGYQIEDERPIPVNGLCS
Ga0307478_106521102	3300031823	Hardwood Forest Soil	MRIRVTTRADLFEERKQQHIDRGYRIEEERPMAVNGFCSF
Ga0318527_105007951	3300031859	Soil	MRIRVTTRASLFEERKRQHIERGYRIEDEEPVPVNGLCSF
Ga0306920_1030040622	3300032261	Soil	MRILVTMRADLFEKRRRQHLERGYRIEDERPIPINGLCSFV
Ga0335085_102295131	3300032770	Soil	MRIRVTTRADLFEKRKKEHIERGYRIEDERPVPVNGFCSFIAVRELSPSD
Ga0335079_104172441	3300032783	Soil	MRIRVSTRANLYDQRKQEHVDRGYRIEDERPVPVNGFCSFVAVREES
Ga0335079_105703761	3300032783	Soil	MRIRVTTKADLFEKRKQQHIERGYRIEDERPIPVN
Ga0335078_100506531	3300032805	Soil	MRIRVTTRADLFEERKQQHIERGYRIEDQRPIPVNGLCSFLV
Ga0335078_101880051	3300032805	Soil	MRIRVTTRADLFEERKQQHIERGYRIEDQRPIPVNGLCSFLVVSEILES
Ga0335078_107119371	3300032805	Soil	MRIRVTTRAELFEKRKQEHIERGYRVEDERPTPVNGF
Ga0335080_101839701	3300032828	Soil	MRIRVSTRANLYDQRKEEHVERGYRIEDERPIPVN
Ga0335080_102235381	3300032828	Soil	MRIRVTTKADLFEKRKQQHIERGYRIEEERPIPVNGFCSFIAVSEIA
Ga0335080_106732673	3300032828	Soil	MRIRVTTRADLFEKRKKEHIERGYRIEDERPVPVNGFCS
Ga0335081_108449491	3300032892	Soil	MRIRVSTRADLFEERKREHIQRGYRIEDEQPMPVNGL
Ga0335081_112964181	3300032892	Soil	MRIRVSTRANLYDQRKQEHLERGYRIEDERPVPVNGFCSF
Ga0335081_127060762	3300032892	Soil	MRIRVTTRANLYQKRKQEHVERGYRIEEERPIPVNGFCSFIA
Ga0335074_110833241	3300032895	Soil	MRMAMRIRVTTRADLFEERKQQHIERGYRIEDERPIPINGFCSFIAVS
Ga0335075_112668532	3300032896	Soil	MRMAMRIRVTTRADLFEERKQQHIERGYRIEDERPIPINGFCSFIAVSEISESDRV
Ga0335071_102463651	3300032897	Soil	MRIRVTTRADLFEKRKKEHMERGYRIEDERPVPVNGFCSFI
Ga0335072_113002232	3300032898	Soil	MRMAMRIRVTTRADLFEERKQQHIERGYRIEDERPI
Ga0335084_101424351	3300033004	Soil	MRIRVSTKANLYDQRKQEHVERGYRIEDERPIPVNGF
Ga0335073_113473712	3300033134	Soil	MRIRVTTRADLFEERRQQHIERGYRIEDERPIPVNGFC
Ga0334790_109147_740_883	3300033887	Soil	MRIRVTTRADLFEERKQQHIERGYRIEDERPIPVNGLCSFIAVSEIPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039780

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences