Metagenome / Metatranscriptome Family F039769

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039769
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	71 residues
Representative Sequence	MTFSVWMLVLAVFLSGAVAGVFTVLVIGIRRGDRAHLADEPGTHLDALTRSVLGVGVRTGCPTGNSGAEGE
Number of Associated Samples	111
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.28 %
% of genes near scaffold ends (potentially truncated)	22.09 %
% of genes from short scaffolds (< 2000 bps)	89.57 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.577 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (15.337 % of family members)
Environment Ontology (ENVO)	Unclassified (17.178 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.399 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 46.46% β-sheet: 0.00% Coil/Unstructured: 53.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF13560	HTH_31	1.23
PF11774	Lsr2	1.23
PF10935	DUF2637	0.61
PF13808	DDE_Tnp_1_assoc	0.61
PF13676	TIR_2	0.61
PF04471	Mrr_cat	0.61
PF13563	2_5_RNA_ligase2	0.61
PF08734	GYD	0.61
PF12696	TraG-D_C	0.61
PF01812	5-FTHF_cyc-lig	0.61
PF00392	GntR	0.61
PF10604	Polyketide_cyc2	0.61
PF02534	T4SS-DNA_transf	0.61
PF13751	DDE_Tnp_1_6	0.61
PF01872	RibD_C	0.61
PF00892	EamA	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.61
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.61
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.61
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.61
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
All Organisms	root	All Organisms	37.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
cellular organisms	root	All Organisms → cellular organisms	37.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	19.02 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.84 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.61 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	15.34 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.68 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.84 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.61 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	15.34 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.84 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.23 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.61 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	15.34 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.84 %
Actinomadura mexicana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura mexicana	0.61 %
Streptomyces violaceusniger group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	0.61 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.58 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	15.34 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.84 %
Streptomyces malaysiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces malaysiensis	0.61 %
Actinomadura mexicana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura mexicana	0.61 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10011127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7188	Open in IMG/M
3300002914\|JGI25617J43924_10335538	Not Available	524	Open in IMG/M
3300004091\|Ga0062387_100766494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	715	Open in IMG/M
3300005172\|Ga0066683_10184071	Not Available	1288	Open in IMG/M
3300005435\|Ga0070714_100930033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	845	Open in IMG/M
3300005445\|Ga0070708_100010577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7483	Open in IMG/M
3300005450\|Ga0066682_10196780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1291	Open in IMG/M
3300005467\|Ga0070706_101215666	Not Available	692	Open in IMG/M
3300005541\|Ga0070733_10229509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1218	Open in IMG/M
3300005541\|Ga0070733_10820041	Not Available	625	Open in IMG/M
3300005610\|Ga0070763_10950500	Not Available	513	Open in IMG/M
3300005952\|Ga0080026_10096323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	820	Open in IMG/M
3300006028\|Ga0070717_10872813	Not Available	819	Open in IMG/M
3300006173\|Ga0070716_101696045	Not Available	521	Open in IMG/M
3300006175\|Ga0070712_100651795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	895	Open in IMG/M
3300006755\|Ga0079222_10836615	Not Available	759	Open in IMG/M
3300006806\|Ga0079220_11339406	Not Available	603	Open in IMG/M
3300007982\|Ga0102924_1055215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2284	Open in IMG/M
3300009038\|Ga0099829_10822767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300009038\|Ga0099829_10971050	Not Available	705	Open in IMG/M
3300009088\|Ga0099830_10969234	Not Available	704	Open in IMG/M
3300009520\|Ga0116214_1118773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	976	Open in IMG/M
3300009522\|Ga0116218_1005383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6024	Open in IMG/M
3300009522\|Ga0116218_1308248	Not Available	708	Open in IMG/M
3300009524\|Ga0116225_1355050	Not Available	653	Open in IMG/M
3300009525\|Ga0116220_10298433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300009672\|Ga0116215_1430105	Not Available	571	Open in IMG/M
3300009698\|Ga0116216_10062254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2296	Open in IMG/M
3300009698\|Ga0116216_10836114	Not Available	551	Open in IMG/M
3300009700\|Ga0116217_10129179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1703	Open in IMG/M
3300009700\|Ga0116217_10916831	Not Available	537	Open in IMG/M
3300010323\|Ga0134086_10013717	Not Available	2526	Open in IMG/M
3300010343\|Ga0074044_10645878	Not Available	690	Open in IMG/M
3300010361\|Ga0126378_10884204	Not Available	1000	Open in IMG/M
3300010371\|Ga0134125_10415084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1493	Open in IMG/M
3300010379\|Ga0136449_100139231	All Organisms → cellular organisms → Bacteria	4803	Open in IMG/M
3300010379\|Ga0136449_100498003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2117	Open in IMG/M
3300010379\|Ga0136449_101575127	Not Available	1000	Open in IMG/M
3300010379\|Ga0136449_102276057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces malaysiensis	787	Open in IMG/M
3300010379\|Ga0136449_102321040	Not Available	777	Open in IMG/M
3300011269\|Ga0137392_10741922	Not Available	812	Open in IMG/M
3300011270\|Ga0137391_10073726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2936	Open in IMG/M
3300011270\|Ga0137391_10213720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1676	Open in IMG/M
3300011270\|Ga0137391_10726037	Not Available	824	Open in IMG/M
3300011271\|Ga0137393_10756647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	831	Open in IMG/M
3300012096\|Ga0137389_10494890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1048	Open in IMG/M
3300012189\|Ga0137388_10294390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1487	Open in IMG/M
3300012205\|Ga0137362_11286258	Not Available	617	Open in IMG/M
3300012207\|Ga0137381_10519712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1038	Open in IMG/M
3300012209\|Ga0137379_10066566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3467	Open in IMG/M
3300012209\|Ga0137379_10980027	Not Available	750	Open in IMG/M
3300012351\|Ga0137386_11234223	Not Available	521	Open in IMG/M
3300012357\|Ga0137384_10252037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1473	Open in IMG/M
3300012357\|Ga0137384_10448021	Not Available	1063	Open in IMG/M
3300012359\|Ga0137385_10661464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	874	Open in IMG/M
3300012923\|Ga0137359_11308759	Not Available	613	Open in IMG/M
3300016319\|Ga0182033_11330011	Not Available	646	Open in IMG/M
3300017821\|Ga0187812_1032985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1769	Open in IMG/M
3300017821\|Ga0187812_1041588	Not Available	1560	Open in IMG/M
3300017821\|Ga0187812_1059982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1272	Open in IMG/M
3300017821\|Ga0187812_1202599	Not Available	634	Open in IMG/M
3300017822\|Ga0187802_10275671	Not Available	653	Open in IMG/M
3300017926\|Ga0187807_1110030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	869	Open in IMG/M
3300017926\|Ga0187807_1111091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	865	Open in IMG/M
3300017926\|Ga0187807_1143586	Not Available	761	Open in IMG/M
3300017926\|Ga0187807_1159819	Not Available	722	Open in IMG/M
3300017926\|Ga0187807_1196387	Not Available	653	Open in IMG/M
3300017926\|Ga0187807_1210118	Not Available	632	Open in IMG/M
3300017928\|Ga0187806_1324267	Not Available	547	Open in IMG/M
3300017932\|Ga0187814_10339015	Not Available	579	Open in IMG/M
3300017932\|Ga0187814_10352160	Not Available	569	Open in IMG/M
3300017936\|Ga0187821_10201553	Not Available	765	Open in IMG/M
3300017942\|Ga0187808_10156210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1006	Open in IMG/M
3300017942\|Ga0187808_10184201	Not Available	926	Open in IMG/M
3300017942\|Ga0187808_10221637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	843	Open in IMG/M
3300017942\|Ga0187808_10597200	Not Available	513	Open in IMG/M
3300017943\|Ga0187819_10431252	Not Available	756	Open in IMG/M
3300017943\|Ga0187819_10816224	Not Available	523	Open in IMG/M
3300017946\|Ga0187879_10764897	Not Available	539	Open in IMG/M
3300017955\|Ga0187817_10465595	Not Available	806	Open in IMG/M
3300017955\|Ga0187817_10483263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300017970\|Ga0187783_10390600	Not Available	1011	Open in IMG/M
3300017972\|Ga0187781_10102202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1991	Open in IMG/M
3300017972\|Ga0187781_10739829	Not Available	712	Open in IMG/M
3300017972\|Ga0187781_11368972	Not Available	523	Open in IMG/M
3300017975\|Ga0187782_10264179	Not Available	1295	Open in IMG/M
3300018001\|Ga0187815_10321202	Not Available	657	Open in IMG/M
3300018007\|Ga0187805_10060411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1704	Open in IMG/M
3300018037\|Ga0187883_10646915	Not Available	550	Open in IMG/M
3300018038\|Ga0187855_10545461	Not Available	675	Open in IMG/M
3300018085\|Ga0187772_10407789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	947	Open in IMG/M
3300018431\|Ga0066655_10947471	Not Available	591	Open in IMG/M
3300020579\|Ga0210407_10169053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1691	Open in IMG/M
3300020581\|Ga0210399_10330143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300020582\|Ga0210395_10387896	Not Available	1051	Open in IMG/M
3300020582\|Ga0210395_10735828	Not Available	737	Open in IMG/M
3300020582\|Ga0210395_11033620	Not Available	608	Open in IMG/M
3300020583\|Ga0210401_10775994	Not Available	819	Open in IMG/M
3300021178\|Ga0210408_10009646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8099	Open in IMG/M
3300021178\|Ga0210408_10729561	Not Available	779	Open in IMG/M
3300021388\|Ga0213875_10450046	Not Available	616	Open in IMG/M
3300021403\|Ga0210397_11232782	Not Available	581	Open in IMG/M
3300021403\|Ga0210397_11395461	Not Available	544	Open in IMG/M
3300021406\|Ga0210386_10144910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1983	Open in IMG/M
3300021406\|Ga0210386_10682270	Not Available	886	Open in IMG/M
3300021407\|Ga0210383_10546223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300021407\|Ga0210383_11677175	Not Available	521	Open in IMG/M
3300021474\|Ga0210390_10723190	Not Available	829	Open in IMG/M
3300021477\|Ga0210398_10457805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1040	Open in IMG/M
3300021860\|Ga0213851_1501644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1059	Open in IMG/M
3300022557\|Ga0212123_10643927	Not Available	661	Open in IMG/M
3300025898\|Ga0207692_10692788	Not Available	661	Open in IMG/M
3300025906\|Ga0207699_10680277	Not Available	752	Open in IMG/M
3300025915\|Ga0207693_11423264	Not Available	514	Open in IMG/M
3300025928\|Ga0207700_11549445	Not Available	587	Open in IMG/M
3300025929\|Ga0207664_11073009	Not Available	720	Open in IMG/M
3300026497\|Ga0257164_1087874	Not Available	530	Open in IMG/M
3300026551\|Ga0209648_10362668	Not Available	986	Open in IMG/M
3300026551\|Ga0209648_10433253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	832	Open in IMG/M
3300026551\|Ga0209648_10623305	Not Available	592	Open in IMG/M
3300027604\|Ga0208324_1186606	Not Available	554	Open in IMG/M
3300027783\|Ga0209448_10147084	Not Available	787	Open in IMG/M
3300027846\|Ga0209180_10664923	Not Available	570	Open in IMG/M
3300027867\|Ga0209167_10244996	Not Available	961	Open in IMG/M
3300027882\|Ga0209590_10386794	Not Available	903	Open in IMG/M
3300027895\|Ga0209624_10861152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	593	Open in IMG/M
3300027895\|Ga0209624_10918580	Not Available	570	Open in IMG/M
3300027905\|Ga0209415_10015586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12301	Open in IMG/M
3300029999\|Ga0311339_10044297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6081	Open in IMG/M
3300029999\|Ga0311339_10698931	Not Available	992	Open in IMG/M
3300029999\|Ga0311339_10749107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	948	Open in IMG/M
3300029999\|Ga0311339_11934166	Not Available	507	Open in IMG/M
3300030007\|Ga0311338_10293476	Not Available	1800	Open in IMG/M
3300030399\|Ga0311353_11392714	Not Available	572	Open in IMG/M
3300031234\|Ga0302325_11517533	Not Available	861	Open in IMG/M
3300031234\|Ga0302325_11981162	Not Available	720	Open in IMG/M
3300031234\|Ga0302325_12449607	Not Available	625	Open in IMG/M
3300031234\|Ga0302325_12524518	Not Available	612	Open in IMG/M
3300031236\|Ga0302324_103600317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura mexicana	500	Open in IMG/M
3300031544\|Ga0318534_10726367	Not Available	560	Open in IMG/M
3300031564\|Ga0318573_10363713	Not Available	777	Open in IMG/M
3300031680\|Ga0318574_10290919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	949	Open in IMG/M
3300031708\|Ga0310686_103574378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1501	Open in IMG/M
3300031708\|Ga0310686_106337027	Not Available	583	Open in IMG/M
3300031708\|Ga0310686_108870412	Not Available	633	Open in IMG/M
3300031720\|Ga0307469_10915575	Not Available	813	Open in IMG/M
3300031751\|Ga0318494_10353853	Not Available	850	Open in IMG/M
3300031769\|Ga0318526_10032399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1915	Open in IMG/M
3300032067\|Ga0318524_10615259	Not Available	572	Open in IMG/M
3300032160\|Ga0311301_10184222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3637	Open in IMG/M
3300032160\|Ga0311301_10423176	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2024	Open in IMG/M
3300032160\|Ga0311301_11304052	Not Available	917	Open in IMG/M
3300032160\|Ga0311301_11605020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300032160\|Ga0311301_11730574	Not Available	750	Open in IMG/M
3300032261\|Ga0306920_102527042	Not Available	706	Open in IMG/M
3300032783\|Ga0335079_11530077	Not Available	658	Open in IMG/M
3300032805\|Ga0335078_10740216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1210	Open in IMG/M
3300032892\|Ga0335081_11196944	Not Available	867	Open in IMG/M
3300032895\|Ga0335074_10060442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5172	Open in IMG/M
3300032895\|Ga0335074_11038384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	717	Open in IMG/M
3300032896\|Ga0335075_10115164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3469	Open in IMG/M
3300032896\|Ga0335075_11453585	Not Available	574	Open in IMG/M
3300033290\|Ga0318519_10455368	Not Available	767	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.39%
Host-Associated	Host-Associated	0.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.14%
Aquatic	Environmental → Aquatic	20.25%
Plants	Host-Associated → Plants	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.39%
Freshwater	Environmental → Aquatic → Freshwater	19.02%
Peat	Environmental → Terrestrial → Peat	6.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.23%
Roots	Host-Associated → Plants → Roots	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.20%
Loam	Environmental → Terrestrial → Soil → Loam	8.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	15.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.84%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	15.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.29%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.07%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.23%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.23%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.61%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.61%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.61%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100111276	3300001356	Peatlands Soil	MTLSAWMVVLAVFLSGAVAGVFAMLVIGIRIGGRAHHLADEPSMHLDAVTRRVLGVAVRTGRPAGNSGAEGE*
JGI25617J43924_103355382	3300002914	Grasslands Soil	WMLALAVFLSGAVAGVFALLVIGIHRGDHAHHLGDRPGTHLDALTRSALGVSVRTGCPAGNGRAEGA*
Ga0062387_1007664941	3300004091	Bog Forest Soil	RHMTHAAFSVWIPVLAVFLSGAVAGVFVLLVIGIRRGDRAHHLADEPGTRLDAITRSVLGVGVRTGCPAGNSGAEGE*
Ga0066683_101840712	3300005172	Soil	MILAVGILALAVFLSGVVAGVLGMLVIGIRRGDRAHHLADEPITHVDALTRRMLGVGVRTSCTADNGRAEGA*
Ga0070714_1009300332	3300005435	Agricultural Soil	MTLAVSVLALAVFLSGAVSGVLVMLVIGIRKGDRAHHLADEPDTHIDALTRRMLGLGVRTGCPVGNDHAEGA*
Ga0070708_1000105779	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAIGILALAVFLSGAVTGVLVMLVISIRRADRARHLADEPGTHVDAITRRMLGVGVRSDCPACNGRAEGA*
Ga0066682_101967802	3300005450	Soil	MILAVGILAIAVFLSGVVAGVLGMLVIGIRRGDRAHQLADEPITHVDALTRRMLGVGVRTSCTADNGRAEGA*
Ga0070706_1012156662	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTFSVWMLVLAVFLSGAVAGVFTVLVIGIRRGDRARLADEPGTHLDALTRSVLGVGVRTGCPPGNSRAEGE*
Ga0070733_102295092	3300005541	Surface Soil	MTFSIWILALAVFLSGAVAGVFVVLVIGIRASDRGHLLTDEPGTHLDALTRSVLGVGVRTNVPANNSGEGVTNARS*
Ga0070733_108200411	3300005541	Surface Soil	MTFSIWMLVLTVFLSGAVAGVFLVIVIGIRTGGRSHRLTDEPRTHLEALTRSMLGVGVRTDFVAGNSRARGK*
Ga0070763_109505002	3300005610	Soil	MTLFAWMLILVALLSGAVAGVFIMLVIGVHAGDRASHLAYEPSTRLDALTRAVLGVGVRTDCPAGDSGSEEEWP
Ga0080026_100963232	3300005952	Permafrost Soil	MTLSVWMLVLAIFLSGAVAGVFVMLVIGIHIGDRTHHLADEPDARLDALARSALGVGVRTSYPAGNGRAKGA*
Ga0070717_108728132	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MILAVWILALTVFLSGAVSGVLTMLVIGIRRGDRARHLADQPGTHLDAITRNLLGVGVRTGCPASNDRTEGA*
Ga0070716_1016960451	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAVSVLALAVFLSGAVTGVLVMLVIGIRRGDRAHHLVDEPDTHVDALTRRMLGVGVRTSCPAGNDHAEGA*
Ga0070712_1006517951	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MILAVWILALTVFLSGAVSGILAMLVIGIRRGDRARHLADDPGTHLDAVTRHLLGVGVRTDCPAGNDRAEGA*
Ga0079222_108366152	3300006755	Agricultural Soil	MILAVWILTLTVFLSGAVSGVLAMLVIGIRRGDRARHLADEPGTHLDAVARHLLGVGVRTDCPASNDRTEGA*
Ga0079220_113394062	3300006806	Agricultural Soil	MNLAVWILALTVFFAGAVSGALAMLVIGIRRGDRARHLADEPGTHLDAITRNLLGVGVRTDCPIGNDRAEGA*
Ga0102924_10552152	3300007982	Iron-Sulfur Acid Spring	MTFSIWVLALVMFLSGGVAGIFGVLVISIRAADKGHRLTDKPDTYLDALTRSVLGVGVRSGFAADESGTEEE*
Ga0099829_108227672	3300009038	Vadose Zone Soil	MTFSVWILVLAVFLSGAVAGVFVMLVIGIGIGDHARHLTYKPVTRLDAITRSVLGVGVRTGSPAGNSSAEGD*
Ga0099829_109710502	3300009038	Vadose Zone Soil	MTLSAWMLALAVFLSGAVAGVFVLLVIGIHRGDRAHHLADEPGTRLDALTRSLLGVGVRTGCHAGNGRAAGA*
Ga0099830_109692341	3300009088	Vadose Zone Soil	MTHVTFSAWILVLAVFLSGAVAGVFALLVIGIRRGDRAHHLTGDPGTHLDALTRSVLGVGVRTGCPA
Ga0116214_11187732	3300009520	Peatlands Soil	MTFSVWMLALAVFLSGAAAAVFIALVIGIHIGDRAHHLADEPDTHLDALTRSVLGVGVRTGHTAGDSSAEGE*
Ga0116218_10053832	3300009522	Peatlands Soil	MLVLAVFLSGAVAGVFVVPVIGVRRGDRAHRLTDEPGTHLDALTRSVLGVGVRTGWPAGNNGAEGE*
Ga0116218_13082481	3300009522	Peatlands Soil	MTFSVWMLALAVFLSGAAAAVFIALVIGIHIGDRAHHLADEPDTHLDALTRSVLGVGVRTSHTAGNSSAEGE*
Ga0116225_13550502	3300009524	Peatlands Soil	MLALAVFLSGAAAGVFVMLVIGIHIGDRAHHLADEPSAHLDALTRSVLGVGVRTRHTAGNSSAEGE*
Ga0116220_102984331	3300009525	Peatlands Soil	MTFSVWMLVLAVFLSGAVAGVFAMVVIGIRIGDRAHHLTDEPGTHLDALTRSVLGVGAMSLL*
Ga0116215_14301052	3300009672	Peatlands Soil	MTFSVWMLALAVFLSGAAAAVFVTLVIGIHIGDRAHHLADEPSTHLDALTRSVLGVGVRTCHTAGNSSAEGE*
Ga0116216_100622542	3300009698	Peatlands Soil	MTFSVWMLALAVFLSGAAAAVFIALVIGIHIGDRARHLADEPSAHLDALTRSVLGVGVRTCHTAGNSSAEGE*
Ga0116216_108361142	3300009698	Peatlands Soil	YATVSVWMPVLAVFLSGAVAGVFVMLVIGIRRGDRAHRLADEPDTHLDALTRSVLGVGVRTGCPSGNSGAEGE*
Ga0116217_101291793	3300009700	Peatlands Soil	MTFSVWMLALALFLSGAAAAVFIALVIGIHIGDRAHHLADEPDTHLDALTRSVLGVGVRTGHTAGDSSAEGE*
Ga0116217_109168311	3300009700	Peatlands Soil	MTFSVWMLVLAMSLSGAVAGVFTVLVIGIHRGDHAHLTDEPGTHLDALTRSVLGVGVRTGRPTGNSGAEGE*
Ga0134086_100137172	3300010323	Grasslands Soil	MILAVGILAIAVFLSGVVAGVLGMLVIGIRRGDRAHHLADEPITHVDALTRRMLGVGVRTSCTADNGRAEGA*
Ga0074044_106458782	3300010343	Bog Forest Soil	MLVLAVFLSGAAAGVFVTLVIGIHIGDRAHHLADEPDAHLDALTRSVLGVGVRTCHTAGNSSAEGE*
Ga0126378_108842041	3300010361	Tropical Forest Soil	MTLAVGILVLAVFLSGAVAGVLVMLVIGIRRGDRAHHLADEPATNLDALTRKALGVGVRTGCPQAMAAPREHD*
Ga0134125_104150842	3300010371	Terrestrial Soil	MTLAVSVLALAVFLSGAVSGVLVMLVIGIRRGDRAHHLATEPDTHVDALTRRMLGVGVRTGCPAGNDHAEGA*
Ga0136449_1001392315	3300010379	Peatlands Soil	MLALAVFLSGAAAGVFVMLVIGIHIGDRARHLADEPSAHLDALTRSMLGVGVRTSHPAGNSSAEGE*
Ga0136449_1004980032	3300010379	Peatlands Soil	MTYATVSVWMPVLAVFLSGAVAGVFVMLVIGIRRGDRAHRLADEPDTHLDALTRSVLGVGVRTGCPSGNSGAEGE*
Ga0136449_1015751272	3300010379	Peatlands Soil	MTFSVWMLTLAVFLSGAAAGVFVTLVIGIHIGDRARHLADKPSARLDAFTRSVLGVGVRTGHTAGDSSAEGE*
Ga0136449_1022760571	3300010379	Peatlands Soil	EGELMTFSVWMLALAVFLSGAAAAVFIALVIGIHIGDRAHHLADEPDTHLDALTRSVLGVGVRTSHTAGNSSAEGE*
Ga0136449_1023210402	3300010379	Peatlands Soil	MTLSVWMLILAVFLSGAIAGVFTVLVIGIRRGDHAHLADEPRTHLDALTRSVLGVGVRTSCPTGNSGAEGE*
Ga0137392_107419222	3300011269	Vadose Zone Soil	MTLSAWMLALAVFLSGAVAGVFVLLVIGIHRGDRAHHLADEPGTRLDALTRSLLGVGVRTGCRAGNGRAEGA*
Ga0137391_100737262	3300011270	Vadose Zone Soil	MTFSVWILVLAVFLSGAVAGVFVMLVIGIRIGDHARHLADKPGTRLDAITRSVLGVGVRTGSPAGNSSAEGD*
Ga0137391_102137201	3300011270	Vadose Zone Soil	MALSVCILALAVFLSGAVSGIFTMLVIGIRRGDRARHLADDPGTHLDALTRNVLGVGVRPGCPSADTSVEGE*
Ga0137391_107260371	3300011270	Vadose Zone Soil	MTFSVWMLVLAVFLSGAVAGAFAMLVIGIHAGDRAGHLADEPGTHLDALTRSVLGVGVRTGRLAGNSSAEGK*
Ga0137393_107566472	3300011271	Vadose Zone Soil	MTLTAWMLVLAVFLSGAVAGVFALLVIGIHRGDRAHHLADEPGTRLDALTRSLLGVGVRTGCRAGNGRAEGA*
Ga0137389_104948901	3300012096	Vadose Zone Soil	MTLAVGILALSVFLSGAVAGVFVMLVIGIRRGDRADHLADEPGTHVDALTRGVLGVGVRTGCPQAMASPKRSMTDARS*
Ga0137388_102943903	3300012189	Vadose Zone Soil	VFLSGAVAGVFVLLVIGIHRGDRAHHLADEPGTRLDALTRSLLGVGVRTGCRAGNGRAEGA*
Ga0137362_112862581	3300012205	Vadose Zone Soil	MTLTVWMLALAVFLSGAVAGVFALLVIGIHRGDHAHHLGDRPGTHLDALTRRALGVGVRTGCPAGNGRAEGA*
Ga0137381_105197122	3300012207	Vadose Zone Soil	MTLSAWMLALAVFLSGAVAGVFALLVIGIHRGDHAHHLGDRPGTHLDALTRRALGVGVRTGCRAGNGRAEGA*
Ga0137379_100665664	3300012209	Vadose Zone Soil	MTLTVWILALAVFLSGAVAGVFALLVIGIHRGDHAHHLGDRPGTHLDALTRRALGVGVRTGCPAGNGRAEGA*
Ga0137379_109800272	3300012209	Vadose Zone Soil	MTFSVWILVLAAFLSGAVAGVFTMLVIGIRIGDRTRHLADEPDARLDALTRSTLGVGVRTSCPAGNSNAEGA*
Ga0137386_112342231	3300012351	Vadose Zone Soil	MTLSAWMLALAVFLSGAVAGVFALLVIGIHRGDHAHHLGDRPGTHLDALTRRALGVGVRTGCPAGN
Ga0137384_102520372	3300012357	Vadose Zone Soil	MILAVWILALAIFLAGAVSGTLAMLVIGIRRGDRARHLADEPGTHLDAVTRNLLGVGVRTDCPAGDDRAEGA*
Ga0137384_104480212	3300012357	Vadose Zone Soil	MTFSVWILVLAAFLSGAVAGVFTMLVIGIHIGDRTHHLADEPDAHLDALTRSMLGVGVRTGCPAGNSSAEGA*
Ga0137385_106614642	3300012359	Vadose Zone Soil	MALSVCILALPVFLSGAVSGIFTMLVIGIRRGDRARHLADDPGTRLDALTRSVVGVGVRSGCPSADTSAEGE*
Ga0137359_113087591	3300012923	Vadose Zone Soil	MTFSVWILVLAAFLSGAVAGVFTMLVIGIHIGDRARHLADEPGTRIDALTRSTLGVGVRT
Ga0182033_113300111	3300016319	Soil	LSAWTLVLAVFLSGAAIGVLVMLVIGIRRGDRACRLADEPGTRLDAVTRRMLGVGVRISGSAGDSRDEGA
Ga0187812_10329851	3300017821	Freshwater Sediment	MTFSVWMLVLAVFLSGAVAGVFTVLVIGIRRGDRAHLADEPATHLDALTRSVLGVGVRTGCPTGNSGAEGE
Ga0187812_10415881	3300017821	Freshwater Sediment	MTFSVWMLVLAVFLSGAVAGVFVMLVIGIQMGDRAHHLADEPGTHLDALTRSVLGVGVRTCHTAGNSSAEGE
Ga0187812_10599821	3300017821	Freshwater Sediment	MTFSAWMLVLAVFLSGAVTGVFTVLVIGIRRGDRSHRLTDEPGTPLDALTRSVLGVGVRTGRT
Ga0187812_12025992	3300017821	Freshwater Sediment	MIFFVWMLVLAVFLSAAVAGVFTVLVIGIRKGDRGHRLTDEPGTPLDALTRSVLGVGVRTGRPAGNSGAEGD
Ga0187802_102756712	3300017822	Freshwater Sediment	MTFSVWMLVLAVFLSAAVAGVFTVLVIGIRKGDRPHRLTDEPGTPLDALTRSVLGVGVRTGCPAGNSGAEGD
Ga0187807_11100302	3300017926	Freshwater Sediment	MTFCAWVLVLTAFLSGAVAGVFAVLVIGIHTGDRAHLANEPGTHLDAITRSVLRVGIRTARHSGVKGE
Ga0187807_11110911	3300017926	Freshwater Sediment	MIFSVWMLVLAVFLSAAVAGVFTVLVIGIRKGDRGHRLTDEPGTPLDALTRSVLGVGVRTGRPAGNSGAEGD
Ga0187807_11435862	3300017926	Freshwater Sediment	MAFSAWMLVLVVFLSGAVAGVFAMLVIGIRMGDRAHLADEPGTHLDAITRSVLCVGVRTGRNSDVDGE
Ga0187807_11598192	3300017926	Freshwater Sediment	MTHATFSVWMLVLAVFLSGAVAGVFVMLVIGIRRGDHARHLADEPGTHLDALTRSVLGVGVRTGCPTGNSGAEGE
Ga0187807_11963871	3300017926	Freshwater Sediment	MTFSVWMLALAVFLSGAVAGVFTVLVIGIRRGDRAHLTDEPGTHLDALTRSVLGVGVRTGCPSGNSGAEGE
Ga0187807_12101182	3300017926	Freshwater Sediment	MTYATISVWMPVLAVFLSGAVAGVFVMLVIGIRRGDRAHHLTDEPETRLDALTRSVLGVGVRTGCPAGNSGAEGE
Ga0187806_13242671	3300017928	Freshwater Sediment	MTFSVWMLVLAVFLSGAVAGIFTVLVIGIRRGDRACLADEPGTRLDALTRSVLGVGVRTGCPTGNSGAEGE
Ga0187814_103390151	3300017932	Freshwater Sediment	MLVLAVFLSGAAAGVFLMLVIGIHVGDHAHLADEPGTHLDAMTRSVLRVGVRTGRNSDAEGE
Ga0187814_103521602	3300017932	Freshwater Sediment	MTFSAWMLVPAVFLSGAVAGVFAVLVIGIHRGDRAHLADEPVTHLDAITRSVLRVGVRTARHSGAKGE
Ga0187821_102015532	3300017936	Freshwater Sediment	MMTFSIWMLILAVFLSGTVTGAFVMLVIGIRRGDRTRHLADEPGTRLDALTRSVLGVGVRTGCPKGNSGAEGE
Ga0187808_101562102	3300017942	Freshwater Sediment	MTFSAWMLVLAVFLSGAVAGVFTVLVIGIRRGDRAHLADEPGTHLNALTRSVLGVGVRTGCPTGNSGAEGE
Ga0187808_101842012	3300017942	Freshwater Sediment	MTFSAWMLVLAVFLSGAVTGVFAVLVIGIHSGDRAHLTDEPGTHLDAITRSVLRVGVRTARRSGAKGE
Ga0187808_102216371	3300017942	Freshwater Sediment	MTFSVWMLVLAVFLSGAVAGVFVMLVIGIQMGDRAHHLADEPGTHLDAIARAVLRVGVRTGCPTGSSGAEGD
Ga0187808_105972001	3300017942	Freshwater Sediment	THAAFSVWIPVLAVFLSGAVAGVFVLLVIGIRRGDRAHHLTDEPETRLDALTRSVLGVGVRTGCPAGNSGAEGE
Ga0187819_104312521	3300017943	Freshwater Sediment	MTFSAWILVLAVFLSGAVAGVFAVLVIGIHRGDRAHLADEPVTHLDAITRSVLGVGVRTVRNSAPKENSQ
Ga0187819_108162242	3300017943	Freshwater Sediment	FLSGAVAGVFALLVIGIRISDRDHHLTDELRTRLDALTRSVLGVGVRTACPTSKSSHEEE
Ga0187879_107648971	3300017946	Peatland	LVLAVFLSGAVAGVFTMLVIGIHIGDRTHHLTDEPDARLDALTRSTLGVGVRTGCSAGNDRAKGA
Ga0187817_104655951	3300017955	Freshwater Sediment	MTFSAWMLVLAVFLSGAVAGVFTVLVIGIRRGDRARLADEPAPRLDALTRSVLGVGVRTGCPTGNSGAEGE
Ga0187817_104832632	3300017955	Freshwater Sediment	MTYATISVWIPVLTVFLSGAIAGVFAMLVIGIRRGDRAHHLTDEPDTRLDALTRSVLGVGVRTGCPAGNSSAEEE
Ga0187783_103906002	3300017970	Tropical Peatland	MTFPVRTLVLAVFLSGAVAGVFVMLVIGIHKGDRAHHLADEPGTHLDALTRSVLGVGVRTSDSAGDGRDEGA
Ga0187781_101022022	3300017972	Tropical Peatland	MIFFVWMLVLAVFLSAAVAGVFTVLVIGIRKGDRGHRLTDEPGTPLDALTRSVLGVGTRTGCPAGNSGAEGD
Ga0187781_107398291	3300017972	Tropical Peatland	MTFSAWTLILAAFLTGTAGGVFTMLVIGIRRGDRAHLADGPGTRLDAITRSVLGVGIRTSSHGDAK
Ga0187781_113689721	3300017972	Tropical Peatland	VLAAFLSGVVSGAFVMLVIGIRIGDRAHRLTDEPGTHLDALTRSVLRVGVRTDCPTGNSRAGGE
Ga0187782_102641792	3300017975	Tropical Peatland	MTFSVWMLVLTAFLSGAVTGVFAMLVIGIRIADRAHHLTSEPGTHLDALTRSLLGVGVHTDCPAGNSSAEGD
Ga0187815_103212021	3300018001	Freshwater Sediment	MTFSVWMLVLAVFLSGAVAGVFTVLVIGIRRGDRAHLADEPGTHLDALTRSVLGVGVRTGCPTGNSGAEGE
Ga0187805_100604111	3300018007	Freshwater Sediment	VLAVFLSGAVTGVFVMLVIGIRRGDHARHLADEPGTHLDAIARAVLRVGVRTGCPTGSSGAEGD
Ga0187883_106469151	3300018037	Peatland	MTFSVWMLVLAVFLSGAVAGVFVMLVIGIHIGDRAPHLADEPDARLDAVTRSTLGVGVRASCPAGNRRTEGA
Ga0187855_105454611	3300018038	Peatland	MTFSVWMLVLAAFLAGAVAGVFVMLVIGIHIGDRVHPLTDEPDARLDALTRSTLGVGVRTSRPAGNDRAKGA
Ga0187772_104077892	3300018085	Tropical Peatland	MTFSVWMLVLAVFLSAAVAGVFTVLVIGIRRGDRAHLADEPATHLDALTRSVLGVGVRTGCPTGNSRGEGE
Ga0066655_109474712	3300018431	Grasslands Soil	MILAVWILALTVFLSGVVSGALVMLVIGIRRGDRAHHLADEPGTHVDALTRSMLGVGVRTGCPAGNDHAEGA
Ga0210407_101690533	3300020579	Soil	MALAVGILALAVFVSGAVAGVLIMLVIGIRRGDRAHHLADEPGTHVDALTRRMLGVGVRTDCPAGNDRGEGA
Ga0210399_103301431	3300020581	Soil	MAFAVGILALAVFVSGAVAGVLIMLVIGIRRGDRAHHLTDEPGTHVDALTRRMLGVGV
Ga0210395_103878961	3300020582	Soil	MTHATFSVWILVLALFLSGAVAGVFILLVIGIRRGDRAHHLTDEPGTYLDAFTRSVLGVGVRTGCPAENNGAEEE
Ga0210395_107358281	3300020582	Soil	MTFSAWMLVLAVFLSGAVAGVFMLLVIGIRRGDRARLTDEPGTYLDAMTRSVLGVGVRTGGNSGAE
Ga0210395_110336202	3300020582	Soil	LAVFVSGAVAGVLIMLVIGIRRGDRAHHLADEPGTHVDALTRRMLGVGVRTDCPAGNDRGEGA
Ga0210401_107759941	3300020583	Soil	MTHAAFSVWILVLAVFLSGAVAGVFVLLVIGIRRGDRAHRLTDEPGAHLDAFTRSVLGVGVRTGCPAGNSSAEEE
Ga0210408_100096465	3300021178	Soil	MTLAVGILALAVFLSGAVAGVLVMLVIGIHRGYRAQHLADQPGTHVDALTRRMLGVGVRTGRPAGNDHAEGA
Ga0210408_107295611	3300021178	Soil	MTLAVGILALAVFLSGAVAGILVILVIGIRRGDRARHLADEPSTHVDALTRRMLGVGVRTGCRAGNDRAEG
Ga0213875_104500461	3300021388	Plant Roots	MTFSLWMLALAVLLSGAAAGVFVTLVIGIHIGDRAHHLADEPGTHLDALTRSVLGVGVRNCRPDGNRSVEGE
Ga0210397_112327822	3300021403	Soil	MTHAAFSVWILVLAVFLSGAVAGVFVLLVIGIRRGDRAHRLADEPGTRLDAITRSVLGVGVRTGCPAGNSGAEGE
Ga0210397_113954612	3300021403	Soil	MTLAVGILALAVFLSGAVAGVLVMLVIGIHRGYRAQHLADQPGTHVDALTRRMLGVGVRTGRPARNDHAEGA
Ga0210386_101449102	3300021406	Soil	MPFSVWMLGLAVFLSGAVAGTFGMLAIGIRRGDRACDLADEPVTRLDALSRNALGVGVRPGCAAGLNGTEENHQ
Ga0210386_106822702	3300021406	Soil	MTHAAFSVWILVLALFLSGAVAGVFVLLVIGIRRGDRAHHLTDEPGTHLDAFTRSVLGVGVRTGCPAGNSSAEEE
Ga0210383_105462232	3300021407	Soil	MTHAAFSVWILVLALFLSGAVAGVFVLLVIGIRRGDRAHHLTDEPGTHLDAFTRSVLGVGVRTGCPAENSSAEEE
Ga0210383_116771752	3300021407	Soil	MTFSVWMLVLAVFLSGAVSGVFVMLVLGIRAGNRVHHLTDEPGTYLDALTRSVLGVGVRTGCPSGNSDAEGE
Ga0210390_107231902	3300021474	Soil	MTHAAFSVWILVLAVFLSGAVAGVFVLLVIGIRRGDRAHHLTDEPGTHLDAFTRSVLGVGVRTGCPAGNSSAEEE
Ga0210398_104578051	3300021477	Soil	MTHATFSVWILVLALFLSGAVAGVFVLLVIGIRRGDRAHRLTDEPGTHLDAFTRSVLGVGVRTGCPTGNSSAEGE
Ga0213851_15016441	3300021860	Watersheds	MTFSVWMLALAVFLSSAAAGVFVTLVIGIHIGDRAHHLADEPGTHLDALTRTVLGVGVRTCHTAGNSSAEGE
Ga0212123_106439271	3300022557	Iron-Sulfur Acid Spring	MTHATFSVWIPVLALLLSGAVAGVFVVLVIGIRRGDRARHLADEPGTRLDAITRSVLGVGVRTRLPYGK
Ga0207692_106927881	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MILAVWILTLTVFLSGAVAGVLVMLVIGIRRGDRARHLADEPGTRLDAVTRHLLGVGVRTGCPASNDRIEGA
Ga0207699_106802772	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MILAVWILALTVFLSGAVSGILAMLVIGIRRGDRARHLADDPGTHLDAVTRHLLGVGVRTDCPASNDHTEGA
Ga0207693_114232641	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTLAVSVLALAVFLSGAVSGVLVMLVIGIRRGNRAHHLADEPDTHVDALTRRMLGVGVRTSCPAGNDRTEGA
Ga0207700_115494452	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MILAVWILALTVFLSGAVSGILAMLVIGIRRGDRARHLADQPGTHLDAVTRHLLGVGVRTDCPAGNDRTEGA
Ga0207664_110730092	3300025929	Agricultural Soil	MILAVWILALTVFLSGVVSGVLAMLVIGIRRGDRARHLADEPGTHLDAVTRHLLGVGVRTDCPASNDHTEGA
Ga0257164_10878741	3300026497	Soil	VGILALAVFLSGAVAGVLGMLVIGIRRGDRAQHLADEPGTHVDAITRRMLGVGVRSDCPARNGRAEGA
Ga0209648_103626681	3300026551	Grasslands Soil	MTLTVWILALAVFLSGAVAGVFALLVIGIHRGDHAHHLGDRPGTHLDALTRRALGVGVRTGCPAGNGRAEGA
Ga0209648_104332532	3300026551	Grasslands Soil	MTFSVWILVLAVFLSGAVAGVFVMLVIGIRIGDHARHLADKPGTRLDAITRSVLGVGVRTGSP
Ga0209648_106233051	3300026551	Grasslands Soil	MTFSIWILVLAVFLSVAVAGVFVLLVIGIRMGDRGHRLTDDPCTHLDALTRSVLGVGVRTGFPAGNSGAEEE
Ga0208324_11866061	3300027604	Peatlands Soil	MTCATFSVWMLVLAVFLSGAVAGVFVVPVIGVRRGDRAHRLTDEPGTHLDALTRSVLGVGVRTGWPAGNNGAEGE
Ga0209448_101470841	3300027783	Bog Forest Soil	MTFSVWMLVLAVFLSGAVAGVFVMLVIGIRRGDRARLTDEPGTYLAAMTRSVLGIGVGTGCNSGAEEE
Ga0209180_106649231	3300027846	Vadose Zone Soil	MTFSVWILVLAVFLSGAVAGVFVMLVIGIRRGDHAHHLADKPGTRLDALTRSVLGVGVRTGCHAGNGRAAGA
Ga0209167_102449962	3300027867	Surface Soil	MTFSIWILALAVFLSGAVAGVFVVLVIGIRASDRGHLLTDEPGTHLDALTRSVLGVGVRTNVPANNSGEGVTNARS
Ga0209590_103867941	3300027882	Vadose Zone Soil	MTLTVWMLALAVFLSGAVAGVFALLVIGIHRGDHAHLGDRPGTHLDALTRRALGVGVRTGCHAGNGRAAGA
Ga0209624_108611522	3300027895	Forest Soil	MTFSVWMLVLAVFLSGAVAGVFTVLVISIRRGDRARLADEPGTHLDALTRSVLGVGVRT
Ga0209624_109185802	3300027895	Forest Soil	LSGAVTGVFIMLVIGIHAGDRARHLADEPGTRLDALTRRVLVGVRTGCPAGDNDAEEEWPADAYNRSDYPCQ
Ga0209415_100155863	3300027905	Peatlands Soil	MTLSAWMVVLAVFLSGAVAGVFAMLVIGIRIGGRAHHLADEPSMHLDAVTRRVLGVAVRTGRPAGNSGAEGE
Ga0311339_100442978	3300029999	Palsa	MTFSVWMLVLAVFLSGAVTGVFVMLVIGIHLGHRTHHLTDEPHTPLDALTRSTLGVGMRTDCPAGNDHAEGA
Ga0311339_106989312	3300029999	Palsa	LTFSVWILVLAVFLSGAAAGVFVMLVIGIHIGDRTRHLTDEPDAPLDALTRSTLGVGVRTSRPAGNDRAEGA
Ga0311339_107491072	3300029999	Palsa	LEGDRMTFSVWMLVLAVFLSGAVAGVFVMLVIGIHIGDRAPHLADEPDARLDALTRSTLGVGVRTSCPVGNRHAEGA
Ga0311339_119341661	3300029999	Palsa	MTFSVWILILAAFLSGAVAGVFVMLVIGIRIGDRAHHLADQPGSHLDAMTRSVLGVGVRIGRPAGNSGAEGD
Ga0311338_102934762	3300030007	Palsa	MTFSVWMLVLAAFLSGAVAGVFVMLVIGIHIGDRAPHLADEPDARLDALTRSTLGVGVRTSCPVGNHHAEGA
Ga0311353_113927142	3300030399	Palsa	MTFSVWMLVLAVFLSGAVTGVFVMLVIGIHIGDRAPHLADEPDARLDAVTRSTLGVGVRTSCPVGNRH
Ga0302325_115175331	3300031234	Palsa	MTFSVWMLVLAVFLSGAVAGVFVMLVIGVHIGDRAPRLTDEPDARLDALTRSTLGVGVRTSCPAGNRRAEGA
Ga0302325_119811622	3300031234	Palsa	MTFSVWILVLAMFLSGAVAGVFVMLVIGIRIGDHARHLADKPGTRLDAITRSVLGVGVRTGRPAGNSGAEGD
Ga0302325_124496071	3300031234	Palsa	MTFSVCMLVLAAFLSGAVAGVFVMLVIGIHIGDRAPHLADEPDARLDALTRSTLGVGVRTSCPAGNRRAEGA
Ga0302325_125245182	3300031234	Palsa	LTFSVWILVLAVFLSGAVTGVFVMLVIGIHIGGRARHLADEPDARLDALTRSTLGVGVRTSCPSGNSRAEGA
Ga0302324_1036003171	3300031236	Palsa	MTLAVWMLVLAVFLSGAVTGVFVMLVIGIHIGGRSHHLTDEPDAHLDALTRSTLGAGVRTNCPAGNRHAEGA
Ga0318534_107263672	3300031544	Soil	VLAVFLSGAAIGVLVMLVIGIRRGDRACRLADEPGTRLDAVTRRMLGVGVRISGSAGDSRDEGA
Ga0318573_103637131	3300031564	Soil	MTLSAWTLVLAVFLSGAAIGVLVMLVIGIRRGDRACRLADEPGTRLDAVTRRMLGVGVRISGSAGDSRDEG
Ga0318574_102909192	3300031680	Soil	MTLSAWTLVLAVFLSGAAIGVLVMLVIGIRRGDRACRLADEPGTRLDAVTRRMLGVGVRISGSAGDSRDEGA
Ga0310686_1035743782	3300031708	Soil	MIHATFSVWILILALLLSGAVAGVFVVLVIGIRRGDRAHHLADGPSTRLDAITRSVLGVGVRTGCPTGNSGAEGE
Ga0310686_1063370272	3300031708	Soil	MTFSVWILVLAVFLSGAVAGVFVVLVIGIRTGDRGHHITDEPDTRLEALTRSVLGVGVRTGFAVRNNSAEWE
Ga0310686_1088704121	3300031708	Soil	MTHATFSVWIAVLAVFLSGAVAAVFVMLVVGIRRGDRAHHLTDEPGTRLDALTRSVLGVGVRTSCPAGNGAEEEMTDARS
Ga0307469_109155753	3300031720	Hardwood Forest Soil	MTFSVWMLVLAVFLSGAVAGVFILLVIGIRRGDRVRLADEPGTHLDAMTRSVLGVGVRTDCNSGAEGE
Ga0318494_103538532	3300031751	Soil	MTLSAWTLVLAVFLSGVAIGVLVMLVIGIRRGDRARRLADEPGTRLDAVTRRMLGVGVRISGSAGDSRDEGA
Ga0318526_100323992	3300031769	Soil	MTFSVWTLVLAVFLSGAAIGVFVMLVIGIHRGDRARHLADEPDTHLDALTRSVLGVGVRTSGPAGDGSAEGA
Ga0318524_106152591	3300032067	Soil	MTLSAWTLVLAVFLSGVAIGVLVMLVIGIRRGDRACRLADEPGTRLDAVTRRMLGVGVRISGSAGDSRDEG
Ga0311301_101842223	3300032160	Peatlands Soil	MTFSVWMLALAVFLSGAAAAVFIALVIGIHIGDRAHHLADEPDTHLDALTRSVLGVGVRTSHTAGNSSAEGE
Ga0311301_104231762	3300032160	Peatlands Soil	MTYATVSVWMPVLAVFLSGAVAGVFVMLVIGIRRGDRAHRLADEPDTHLDALTRSVLGVGVRTGCPSGNSGAEGE
Ga0311301_113040522	3300032160	Peatlands Soil	MTFSVWMLALAVFLSGAAAAVFVTLVIGIHIGDRARHLADEPSAHLDALTRSVLGVGVRTCHTAGNSSAEGE
Ga0311301_116050202	3300032160	Peatlands Soil	MTFSVWMLVLAMSLSGAVAGVFTVLVIGIHRGDHAHLTDEPGTHLDALTRSVLGVGVRTGRPTGNSGAEGE
Ga0311301_117305741	3300032160	Peatlands Soil	MTFSVWMLVLAVFLSGAVAGVFAMVVIGIRIGDRAHHLTDEPGTHLDALTRSVLGVGAMSLL
Ga0306920_1025270421	3300032261	Soil	MTLSAWTLVLAVFLSGAAIGVLVMLVIGIRRGDRARRLADEPGTRLDAVTRRMLGVGVRISGSAGDSRDEGA
Ga0335079_115300772	3300032783	Soil	MTFSTWMLLLAAFLSGAVAGVFIMLVIGIRMSDRGHHLTNEPGAHLDALTRSVLGVGVRTGCSAGHSGAEGV
Ga0335078_107402162	3300032805	Soil	MTLFAWTLILAVLLSGVVTGVFALLVIGIHAGDRARHLADQPGTRLDALTRSALGVGVRTGRPAADSRAETEWPADTRDRSDNPCR
Ga0335081_111969442	3300032892	Soil	MTFSTWMLLLAAFLSGAVAGVFIMLVIGIRMSDRGHHLTNEPGAHLDALTRSVLGVGVRTSRPAGNSGAEGD
Ga0335074_100604426	3300032895	Soil	MTFSVLMLILAVFLSGAVAGVFAILVIGIRIGDRAHRLTDEPGTYLDALTRSVLGVGVRTSRPAGDSAAEGD
Ga0335074_110383842	3300032895	Soil	ILAVFLSGAVAGVFTVLVIGIRRGDHAHLTDEPRTHLDALTRSVLGVGVRTSCPTGNSGAEGE
Ga0335075_101151644	3300032896	Soil	MTFSIWMLVLAVFLSGSVAGVFAMLAIGIHAGNRIHHLTDEPGTHLDALTRSVLGVGVRTERPTGNSGAEGK
Ga0335075_114535851	3300032896	Soil	MTLSAWMLILAVFLSGAVAGVFTVLVIGIRRGDRAHLTDDPRTHLDALTRSMLGVGVRTGRPAGNSGAEGE
Ga0318519_104553681	3300033290	Soil	MTLSAWTLVLAVFLSGAAIGVLVMLVIGIRRGDRACRLADEPGTRLDAVTRRMLGVGVRTNQKSRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039769

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences