Metagenome / Metatranscriptome Family F039716

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039716
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	42 residues
Representative Sequence	MESTLTGPILYLLIAWGIVTAVFLVLLIWRSLLESHEDDQIFLD
Number of Associated Samples	141
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.55 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.02 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.847 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.926 % of family members)
Environment Ontology (ENVO)	Unclassified (31.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.307 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.78% β-sheet: 0.00% Coil/Unstructured: 47.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF00106	adh_short	7.98
PF13561	adh_short_C2	3.07
PF00775	Dioxygenase_C	2.45
PF07238	PilZ	1.84
PF01139	RtcB	1.23
PF02687	FtsX	1.23
PF07589	PEP-CTERM	1.23
PF01904	DUF72	1.23
PF00248	Aldo_ket_red	1.23
PF00486	Trans_reg_C	1.23
PF09411	PagL	0.61
PF13407	Peripla_BP_4	0.61
PF02894	GFO_IDH_MocA_C	0.61
PF12704	MacB_PCD	0.61
PF00430	ATP-synt_B	0.61
PF01590	GAF	0.61
PF00589	Phage_integrase	0.61
PF13377	Peripla_BP_3	0.61
PF02371	Transposase_20	0.61
PF15780	ASH	0.61
PF01738	DLH	0.61
PF03781	FGE-sulfatase	0.61
PF13276	HTH_21	0.61
PF00583	Acetyltransf_1	0.61
PF03551	PadR	0.61
PF00092	VWA	0.61
PF01642	MM_CoA_mutase	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.45
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	1.23
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.23
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.61
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.61
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.61
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.61
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.61
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.61
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.85 %
Unclassified	root	N/A	25.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.85 %
Unclassified	root	N/A	25.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.85 %
Unclassified	root	N/A	25.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.80 %
Unclassified	root	N/A	25.15 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.61 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.99 %
Unclassified	root	N/A	25.15 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.04 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.45 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.38 %
Unclassified	root	N/A	25.15 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.20 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.45 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.84 %
Acidobacteria bacterium 13_1_40CM_4_61_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	0.61 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.38 %
Unclassified	root	N/A	25.15 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.20 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.45 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.61 %
Acidobacteria bacterium 13_1_40CM_4_61_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.38 %
Unclassified	root	N/A	25.15 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.45 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.23 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.61 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.61 %
Acidobacteria bacterium 13_1_40CM_4_61_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	0.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.38 %
Unclassified	root	N/A	25.15 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.45 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.23 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.61 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.61 %
Acidobacteria bacterium 13_1_40CM_4_61_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01A207L	Not Available	505	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101768400	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104446217	Not Available	501	Open in IMG/M
3300000559\|F14TC_100383990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1849	Open in IMG/M
3300000789\|JGI1027J11758_12584935	Not Available	575	Open in IMG/M
3300001174\|JGI12679J13547_1014124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300002906\|JGI25614J43888_10015969	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300004082\|Ga0062384_100799077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	659	Open in IMG/M
3300004092\|Ga0062389_104447564	Not Available	527	Open in IMG/M
3300004152\|Ga0062386_100793606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300004152\|Ga0062386_101729132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	522	Open in IMG/M
3300004479\|Ga0062595_102227852	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300004635\|Ga0062388_102953685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	502	Open in IMG/M
3300005162\|Ga0066814_10107044	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005436\|Ga0070713_101409971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300005437\|Ga0070710_11294816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300005537\|Ga0070730_10178294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1427	Open in IMG/M
3300005541\|Ga0070733_10315076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300005541\|Ga0070733_10765937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	648	Open in IMG/M
3300005554\|Ga0066661_10327683	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300005602\|Ga0070762_10957051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300005610\|Ga0070763_10549321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	665	Open in IMG/M
3300005614\|Ga0068856_101067139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	825	Open in IMG/M
3300005712\|Ga0070764_10278334	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300006102\|Ga0075015_100709031	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300006102\|Ga0075015_101021584	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300006162\|Ga0075030_101273876	Not Available	577	Open in IMG/M
3300006176\|Ga0070765_101634840	Not Available	605	Open in IMG/M
3300006797\|Ga0066659_11048718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	681	Open in IMG/M
3300006800\|Ga0066660_10958101	Not Available	692	Open in IMG/M
3300006903\|Ga0075426_11547494	Not Available	504	Open in IMG/M
3300007788\|Ga0099795_10395133	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300009012\|Ga0066710_101746397	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009038\|Ga0099829_11691471	Not Available	520	Open in IMG/M
3300009088\|Ga0099830_10280272	Not Available	1326	Open in IMG/M
3300009088\|Ga0099830_10667305	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300009088\|Ga0099830_11238360	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300009519\|Ga0116108_1189018	Not Available	606	Open in IMG/M
3300009520\|Ga0116214_1305974	Not Available	610	Open in IMG/M
3300010322\|Ga0134084_10398504	Not Available	536	Open in IMG/M
3300010326\|Ga0134065_10494367	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300010359\|Ga0126376_13062151	Not Available	517	Open in IMG/M
3300010396\|Ga0134126_11491370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	746	Open in IMG/M
3300010880\|Ga0126350_12013043	Not Available	574	Open in IMG/M
3300011269\|Ga0137392_11202346	Not Available	616	Open in IMG/M
3300011270\|Ga0137391_10497047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300012189\|Ga0137388_11397575	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300012198\|Ga0137364_10045792	All Organisms → cellular organisms → Bacteria → Acidobacteria	2890	Open in IMG/M
3300012200\|Ga0137382_10576619	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300012203\|Ga0137399_10258361	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300012207\|Ga0137381_10861691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300012208\|Ga0137376_10241661	All Organisms → cellular organisms → Bacteria → Acidobacteria	1565	Open in IMG/M
3300012210\|Ga0137378_11318678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012211\|Ga0137377_11173169	Not Available	698	Open in IMG/M
3300012359\|Ga0137385_11118752	Not Available	648	Open in IMG/M
3300012361\|Ga0137360_10238042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1490	Open in IMG/M
3300012362\|Ga0137361_11023741	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300012582\|Ga0137358_10073522	All Organisms → cellular organisms → Bacteria → Acidobacteria	2297	Open in IMG/M
3300012683\|Ga0137398_11169321	Not Available	527	Open in IMG/M
3300012685\|Ga0137397_10832560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300012685\|Ga0137397_11313410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012918\|Ga0137396_10170269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1593	Open in IMG/M
3300012923\|Ga0137359_10134686	All Organisms → cellular organisms → Bacteria → Acidobacteria	2198	Open in IMG/M
3300012923\|Ga0137359_10471784	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300012923\|Ga0137359_11313890	Not Available	611	Open in IMG/M
3300012924\|Ga0137413_11211891	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300012927\|Ga0137416_10161713	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300012927\|Ga0137416_11726191	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300012929\|Ga0137404_11108235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300012930\|Ga0137407_11754584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	592	Open in IMG/M
3300012972\|Ga0134077_10437873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300013308\|Ga0157375_11857790	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300014166\|Ga0134079_10085178	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300015357\|Ga0134072_10408860	Not Available	537	Open in IMG/M
3300015371\|Ga0132258_11261056	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300016341\|Ga0182035_10379675	Not Available	1182	Open in IMG/M
3300016341\|Ga0182035_12087423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	515	Open in IMG/M
3300016357\|Ga0182032_10754856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300016357\|Ga0182032_10934247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	738	Open in IMG/M
3300016371\|Ga0182034_10032977	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300016387\|Ga0182040_11922129	Not Available	508	Open in IMG/M
3300016422\|Ga0182039_10174400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1691	Open in IMG/M
3300017924\|Ga0187820_1169009	Not Available	668	Open in IMG/M
3300017928\|Ga0187806_1386041	Not Available	504	Open in IMG/M
3300017929\|Ga0187849_1081070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1416	Open in IMG/M
3300017930\|Ga0187825_10179754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300017933\|Ga0187801_10460513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300017974\|Ga0187777_11137563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300017975\|Ga0187782_11216865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300017999\|Ga0187767_10266051	Not Available	571	Open in IMG/M
3300018006\|Ga0187804_10570482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300018012\|Ga0187810_10292083	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300018088\|Ga0187771_10919816	Not Available	742	Open in IMG/M
3300018088\|Ga0187771_11234815	Not Available	634	Open in IMG/M
3300018090\|Ga0187770_10285825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300018090\|Ga0187770_10772902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300018090\|Ga0187770_10977277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300018433\|Ga0066667_11318057	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300020034\|Ga0193753_10292113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	705	Open in IMG/M
3300020199\|Ga0179592_10009326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4227	Open in IMG/M
3300020579\|Ga0210407_10155851	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300020581\|Ga0210399_10264174	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300020581\|Ga0210399_11187523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300020583\|Ga0210401_11076469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	662	Open in IMG/M
3300021088\|Ga0210404_10166431	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M
3300021088\|Ga0210404_10333214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300021171\|Ga0210405_10949482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300021401\|Ga0210393_11539427	Not Available	528	Open in IMG/M
3300021405\|Ga0210387_10949618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	755	Open in IMG/M
3300021406\|Ga0210386_10659321	All Organisms → cellular organisms → Bacteria → Acidobacteria	903	Open in IMG/M
3300021407\|Ga0210383_10937327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300021420\|Ga0210394_11291327	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300021432\|Ga0210384_11061710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300021474\|Ga0210390_11570721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300021475\|Ga0210392_10152279	Not Available	1581	Open in IMG/M
3300021559\|Ga0210409_11392321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021560\|Ga0126371_12225648	Not Available	662	Open in IMG/M
3300024288\|Ga0179589_10571259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300025898\|Ga0207692_10588301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	714	Open in IMG/M
3300025919\|Ga0207657_11453882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300025928\|Ga0207700_10909522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300025938\|Ga0207704_10188568	Not Available	1498	Open in IMG/M
3300026319\|Ga0209647_1207178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300026320\|Ga0209131_1341233	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300026532\|Ga0209160_1078130	All Organisms → cellular organisms → Bacteria → Acidobacteria	1756	Open in IMG/M
3300026551\|Ga0209648_10344000	Not Available	1031	Open in IMG/M
3300027070\|Ga0208365_1041274	Not Available	615	Open in IMG/M
3300027591\|Ga0209733_1059469	All Organisms → cellular organisms → Bacteria → Acidobacteria	1003	Open in IMG/M
3300027591\|Ga0209733_1122965	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300027643\|Ga0209076_1083928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300027660\|Ga0209736_1010301	All Organisms → cellular organisms → Bacteria	3000	Open in IMG/M
3300027846\|Ga0209180_10210373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300027857\|Ga0209166_10001974	All Organisms → cellular organisms → Bacteria	16169	Open in IMG/M
3300027862\|Ga0209701_10043492	All Organisms → cellular organisms → Bacteria → Acidobacteria	2898	Open in IMG/M
3300027862\|Ga0209701_10583763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300027875\|Ga0209283_10333724	All Organisms → cellular organisms → Bacteria → Acidobacteria	997	Open in IMG/M
3300027910\|Ga0209583_10198267	Not Available	855	Open in IMG/M
3300028047\|Ga0209526_10104896	All Organisms → cellular organisms → Bacteria → Acidobacteria	1988	Open in IMG/M
3300028047\|Ga0209526_10157886	All Organisms → cellular organisms → Bacteria → Acidobacteria	1587	Open in IMG/M
3300028145\|Ga0247663_1023738	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300028536\|Ga0137415_10797885	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300028906\|Ga0308309_11547103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031057\|Ga0170834_102578329	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10043736	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300031573\|Ga0310915_10769357	Not Available	678	Open in IMG/M
3300031740\|Ga0307468_101845799	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300031748\|Ga0318492_10609638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	583	Open in IMG/M
3300031748\|Ga0318492_10735347	Not Available	529	Open in IMG/M
3300031765\|Ga0318554_10568301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	640	Open in IMG/M
3300031947\|Ga0310909_11297217	Not Available	586	Open in IMG/M
3300031954\|Ga0306926_12893142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300031962\|Ga0307479_10305507	Not Available	1572	Open in IMG/M
3300032035\|Ga0310911_10027073	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300032059\|Ga0318533_11396279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	511	Open in IMG/M
3300032076\|Ga0306924_10973871	Not Available	933	Open in IMG/M
3300032782\|Ga0335082_10148775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2270	Open in IMG/M
3300032805\|Ga0335078_10842686	Not Available	1111	Open in IMG/M
3300032892\|Ga0335081_10219918	All Organisms → cellular organisms → Bacteria	2602	Open in IMG/M
3300033134\|Ga0335073_10900297	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300033290\|Ga0318519_10999662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	519	Open in IMG/M
3300033405\|Ga0326727_10232940	All Organisms → cellular organisms → Bacteria → Acidobacteria	1938	Open in IMG/M
3300033405\|Ga0326727_10496666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300034091\|Ga0326724_0017234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6617	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.32%
Host-Associated	Host-Associated	3.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.89%
Aquatic	Environmental → Aquatic	10.43%
Plants	Host-Associated → Plants	3.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.05%
Freshwater	Environmental → Aquatic → Freshwater	7.98%
Sediment	Environmental → Aquatic → Sediment	2.45%
Peat	Environmental → Terrestrial → Peat	1.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.64%
Loam	Environmental → Terrestrial → Soil → Loam	10.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.23%
Sand	Environmental → Terrestrial → Soil → Sand	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.61%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.29%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.07%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.07%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.45%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.23%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.61%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.61%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_11186050	2170459005	Grass Soil	METLTGPIFYMLVAWGIVTAIFLVLLIWRSLLESHETIRSSL
INPhiseqgaiiFebDRAFT_1017684001	3300000364	Soil	MSESTLTGPVLYXLIAWGIVTAVFLALLLWRNLLESHEDD
INPhiseqgaiiFebDRAFT_1044462171	3300000364	Soil	MESTLQGPVLYLLIASGVVTAAFLALLIWRNLLEGHEDDQLFLDAGEQR
F14TC_1003839904	3300000559	Soil	MESTLTGPIFYLLIAFGIVTAVFLVLLIWRSLLESHEDDQIF
JGI1027J11758_125849352	3300000789	Soil	MDAIEGLLNGPFLYLLITWGVVTAIFLILVIWRSVLA
JGI12679J13547_10141241	3300001174	Forest Soil	METLTGPILYLLIVWGIVTATFLALLLWRSILTTHEDD
JGI25614J43888_100159694	3300002906	Grasslands Soil	MEASTLTGPILYLLIVWGIVTATFLALLLWRSILTTHEDDQLCID
Ga0062384_1007990772	3300004082	Bog Forest Soil	MEAAESAFNGPMLYVLIAWGVATAIFLLLIAWRSVLSSHEDDQIFLD
Ga0062389_1044475641	3300004092	Bog Forest Soil	MESTTLTGPVLYLLIAWGIITGIFVILFIWRSVLSSHEDD
Ga0062386_1007936062	3300004152	Bog Forest Soil	METIESVLSGPILYLLIAWGIVTAVFLALIAWRSVLTSHEDDQIFL
Ga0062386_1017291321	3300004152	Bog Forest Soil	MESVESVLQGPILYLLIVWGIVTAIFLALIAWRSVLTSHEDDQIFL
Ga0062595_1022278521	3300004479	Soil	METLTGPILYVLIAWAIVTAIFMMLLIRRSLLASHEDDQIFLDASE
Ga0062388_1029536851	3300004635	Bog Forest Soil	METLTTGPIFYVLIAWSIVTAIFMLLLIRRSLLASHEDDQIFLDAA
Ga0066814_101070442	3300005162	Soil	MGPLEYLLSGPLLYLLIVWSIATVIFIGLLIWRSLLSSHEDDQIFLDPSE
Ga0070713_1014099711	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDAIEGLLNGPFLYLLITWGVVTAIFLILVIWRSVLASHEDDQIFLDA
Ga0070710_112948162	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MESTLTGPILYLLIAWGIVTAVFLVLLIWRSLLESHEDDQIFLD
Ga0070730_101782943	3300005537	Surface Soil	MESIQGPVLYLLIACGVVTAAFLGLLIWKSLLESHEDDQIFLGTTE
Ga0070733_103150762	3300005541	Surface Soil	MPESLSQGPIFYLLVAWGIVTAIFLVLLIWRSLLESHEDDQLF
Ga0070733_107659372	3300005541	Surface Soil	MESPTLTGPILYLLFAWGGITTIFIGLLIWRSLLTSHEGDQIFLDAAQE
Ga0066661_103276831	3300005554	Soil	MDQFLSGPLLYLLIAWGVATAVFLGLLFRRSLLSSHEDDQIFLDAAEE
Ga0070762_109570511	3300005602	Soil	METLTTGPILYVLIAWGIVTSVFMLLLIRRSLLASHEDDQIFLDAA
Ga0070763_105493211	3300005610	Soil	MDAMESTLTGPVLYLLVAWGAVTVIFIGLLIWRSLLTS
Ga0068856_1010671392	3300005614	Corn Rhizosphere	MESLHLTGPLFYLTVAWGVVTAVFIGLLIWRSLLAS
Ga0070764_102783341	3300005712	Soil	MDAMESAFSGPLLYLLIVWGVVTAVFLLLIAWRSVLSSHEDD
Ga0075015_1007090314	3300006102	Watersheds	MDRLTGPILYVLIAWGAVTAVFMMLLIRRSLLASHEDDQIFL
Ga0075015_1010215842	3300006102	Watersheds	MEMMESAFTGPMEYLLIVWGVVTAIFLLLIAWRSVLASHE
Ga0075030_1012738761	3300006162	Watersheds	MELMESVFTGPMLYLLVVWGLVTAIFLALVAWRSVLSSHEDDQIF
Ga0070765_1016348401	3300006176	Soil	METLTTGPIFYVLIAWGIVTAVFMLLLIRRSLLASHEDDQIFL
Ga0066659_110487183	3300006797	Soil	MESLNPAPIMYLLIVWGLVTAVFIVLLIRKSLLESHEDDQ
Ga0066660_109581012	3300006800	Soil	METLTGPVLYLLIAWGMVTAIFLALLLWRSILTTHEDDQL
Ga0075426_115474941	3300006903	Populus Rhizosphere	MDAIEGLLNGPFLYLLITWGVVTAIFLILVIWRSVLASHED
Ga0099795_103951331	3300007788	Vadose Zone Soil	MGETLTGPILYLLIVWGILTATFLALLLWRSILTTHEDD
Ga0066710_1017463971	3300009012	Grasslands Soil	METIQGPILYLLIAWGILTGIFILLLIWRSVLSSHEDDQIFLD
Ga0099829_116914712	3300009038	Vadose Zone Soil	MESTLQGPVLYLLIAWGIVTAVFVILFIWRSVLSSH
Ga0099830_102802721	3300009088	Vadose Zone Soil	MEATLTGPILYLLIAWGIVTAIFLALLLWRSILTTHEDDQLCIDAA
Ga0099830_106673053	3300009088	Vadose Zone Soil	MESTSLTGPLLYLLIAWGVATAAFLVLLLRRSLLASHEDDQIF
Ga0099830_112383601	3300009088	Vadose Zone Soil	MESTSLTGPLLYLLIAWGVVTAAFLVLLLRRSLLASHEDDQIFLDA
Ga0116108_11890181	3300009519	Peatland	MESVESVLQGPILYLLIVWGVVTAIFLALVAWRSVLTSHE
Ga0116214_13059742	3300009520	Peatlands Soil	METLTTGPIFYVLIAWSIVTAIFMLLLIRRSLLASHEDDQIFLDA
Ga0134084_103985041	3300010322	Grasslands Soil	MDQQLTGPLLYLLIVWGVVTAVFLVLLLRRSLLAS
Ga0134065_104943671	3300010326	Grasslands Soil	MDQQTLTGPLLYLLIVWGVVTAVFLVLLLRRSLLASHEDDQIF
Ga0126376_130621511	3300010359	Tropical Forest Soil	MESTLTGPVLYLLIAWGIVTAVFIILFIWRGVLSS
Ga0134126_114913702	3300010396	Terrestrial Soil	MDQIESTLTGPGLYLLIAWGAVTAIFIALLIWRSLLTSHEDDQ
Ga0126350_120130431	3300010880	Boreal Forest Soil	MERLTGPILYVLIAWAAVTAVFMLLLIRRSLLASHEDDQI
Ga0137392_112023461	3300011269	Vadose Zone Soil	MESLTLSGPLLYMIIAWGIVTAAFLVLWLRRSLLASHEDD
Ga0137391_104970471	3300011270	Vadose Zone Soil	METLTGPIFYMLVAWGIVTAIFLVLLIWRSLLESHEDDQIF
Ga0137388_113975751	3300012189	Vadose Zone Soil	MESQTLTGPLLYMIIAWGIVTAAFLVLWLRRSLLASHEDDQIFL
Ga0137364_100457921	3300012198	Vadose Zone Soil	MDPQTLTGPLLYLLVAWGVVTAVFLVLLLRRSLLASHEDDQ
Ga0137382_105766191	3300012200	Vadose Zone Soil	MEAQSFLSGPLLYLLIAWGVATAVFLGLLFRRSLLSSHEDDQIF
Ga0137399_102583611	3300012203	Vadose Zone Soil	MGETLTGPILYLLIVWGILTATFLALLLWRSILTTHEDDQLC
Ga0137381_108616912	3300012207	Vadose Zone Soil	MESSTLTGPIFYMLVAWGIVTAIFLVLLIWRSLLESH
Ga0137376_102416611	3300012208	Vadose Zone Soil	MDPQFLSGPLLYLLIAWGVATAVFLGLLFRRSLLSSHEDDQI
Ga0137378_113186781	3300012210	Vadose Zone Soil	MESTLHGPVLYLLIAWGIVTAVFVILFIWRSVLSSHEDDQIFI
Ga0137377_111731691	3300012211	Vadose Zone Soil	METLTGPIFYLLVAWGIVTAIFLVLLIWRSLLESHE
Ga0137385_111187521	3300012359	Vadose Zone Soil	MESTLHGPVLYLLVAWGIVTAVFVILFIWRSGLSSHE
Ga0137360_102380423	3300012361	Vadose Zone Soil	MPESLTQGPIFYLLITWAVFTAVFLALLIWRSLLESHEDDQI
Ga0137361_110237412	3300012362	Vadose Zone Soil	MEASTLTGPILYLLIVWGIVTATFLALLLWRSILTTHEDDQLC
Ga0137358_100735221	3300012582	Vadose Zone Soil	MEATLTGPILYLLIVWGIVTAIFLALLLWRSILTTHEDDQLCIDA
Ga0137398_111693212	3300012683	Vadose Zone Soil	MEVTRETLTGPILYLLIAWGVVTAIFLALLLWRSL
Ga0137397_108325601	3300012685	Vadose Zone Soil	MGETLTGPILYLLIVWGILTATFLALLLWRSILTTHEDDQLCIDAA
Ga0137397_113134101	3300012685	Vadose Zone Soil	METLTGPIFYMLVAWGIVTAIFLVLLIWRSLLESHEDDQ
Ga0137396_101702691	3300012918	Vadose Zone Soil	MEVTMETLTGPILYLLIVWGIVTAIFLGLLLWRSI
Ga0137359_101346864	3300012923	Vadose Zone Soil	MEATLTGPILYLLIVWGILVATFLALLLWRSILTTHEDDQLCIDAAGE
Ga0137359_104717843	3300012923	Vadose Zone Soil	METLTGPIFYMLVAWGIVTAIFLLLLIWRSLLESHEDDQIFIEAS
Ga0137359_113138902	3300012923	Vadose Zone Soil	MESTLQGPVLYLLIAWGIVTAVFVILFIWRSVLSS
Ga0137413_112118911	3300012924	Vadose Zone Soil	MEVTMETLTGPILYLLIVWGILTATFLALLLWRSILTTHEDDQLC
Ga0137416_101617131	3300012927	Vadose Zone Soil	MEVTMETLTGPILYLLIVWGIVTAIFLGLLLWRSILTTHEDDQ
Ga0137416_117261911	3300012927	Vadose Zone Soil	MESQTLTGPLLYLLIAWGVVTAVFLVLLLRRSLLASH
Ga0137404_111082352	3300012929	Vadose Zone Soil	METLTGPIFYMLVAWGIVTAIFLLLLIWRSLLESHEDDQIFIEASGDRMAKE
Ga0137407_117545841	3300012930	Vadose Zone Soil	MESIQGPVLYLLIACGVVTAAFLGLLIWKSLLESHEDDQIFLGTTEQHLA
Ga0134077_104378732	3300012972	Grasslands Soil	MESTLTPPVFYLLIVWGIVTSVFVILLIWRGLLSSHE
Ga0157375_118577902	3300013308	Miscanthus Rhizosphere	MSESTLTGPVLYTLIAWGIVTAVFLALLLWRNLLESHEDDQLFIDAAED
Ga0134079_100851784	3300014166	Grasslands Soil	MDPQTLTGPLLYLLIVWGVVTAVFLVLLLRRSLLASHE
Ga0134072_104088601	3300015357	Grasslands Soil	MDQQLTGPLLYLLIVWGVVTAVFLVLLLRRSLLASHED
Ga0132258_112610561	3300015371	Arabidopsis Rhizosphere	MSESTLTGPVLYTLIAWGIVTAVFLALLLWRNLLESHEDDQIFLGAA
Ga0182035_103796752	3300016341	Soil	MSESTLTGPVLYLLIAWGVVTAIFLILLIWRNLLESHEDDQIF
Ga0182035_120874232	3300016341	Soil	MDQVEELFQGTTLYLTVVWGVVTAIFLVLVAWRSVLSSHEDD
Ga0182032_107548562	3300016357	Soil	MEQLESAFSGPLLYLLISWGVVTAVFLVLIAWRSLLAS
Ga0182032_109342472	3300016357	Soil	MEQVEELFQGTTLYLTVVWGVVTAIFLVLVAWRSVLSSHEDDQIFI
Ga0182034_100329775	3300016371	Soil	MESSLTGPVLYLLVAWGIVTAIFLALLIWRNLLES
Ga0182040_119221292	3300016387	Soil	MEQVEELFQGTTLYLTVVWGVVTAIFLVLVAWRSVLSSHEDDQIF
Ga0182039_101744001	3300016422	Soil	MEAEINGPMLYLLIAWGVVTAIFLALIAWRSVLSSHED
Ga0187820_11690091	3300017924	Freshwater Sediment	MSEMESAFTGSLLYLLIAWGLVTAIFLALVAWRSVLSSHEDDQIF
Ga0187806_13860411	3300017928	Freshwater Sediment	METMESVFTGPMLYLLVVWGPVTAIFLVLVAWRSVLSSHE
Ga0187849_10810701	3300017929	Peatland	METAESVLSGPMLYLLIAWGVVTAVFIVLVAWRGVL
Ga0187825_101797542	3300017930	Freshwater Sediment	MESSLTGPVLYLLIAFGVVAALFLLLLIWRNLLESHEDDQLFLDAGEANMA
Ga0187801_104605131	3300017933	Freshwater Sediment	MELMENVFTGPMLYLLVVWGLVTAIFLVLVAWRSVLSSHEDDQIFLDA
Ga0187777_111375631	3300017974	Tropical Peatland	METTFTGPLLYLSVAWAVITAVFIGLVIWRSLLASHEDDQIFLDAA
Ga0187782_112168651	3300017975	Tropical Peatland	MDTAENMLQGPMLYLLIAWGVVTAIFIILVAWRGVLASHEDDQI
Ga0187767_102660512	3300017999	Tropical Peatland	MESTLHGPVLYLLIAWGIATLIFVILFIWRSVLSSH
Ga0187804_105704821	3300018006	Freshwater Sediment	MELMESVFTGPMLYLLVVWGLVTAIFLALVAWRSVLS
Ga0187810_102920833	3300018012	Freshwater Sediment	MPETETLLAGPMLYLLIIWGVVTAVFLALIAWRSVL
Ga0187771_109198162	3300018088	Tropical Peatland	MDAEFLLSGPMLFLLIVWGVVTAVFLGLVAWRSVLSSHEDDQIFL
Ga0187771_112348152	3300018088	Tropical Peatland	MDAESLLSGPMLFLLIVWGVVTAVFLGLVAWRSVLSSHEDDQIFL
Ga0187770_102858253	3300018090	Tropical Peatland	MNDMETVLTGPMLYLLIIWGVVTAVFLALIAWRSVLS
Ga0187770_107729022	3300018090	Tropical Peatland	MDAEFLLSGPMLFLLIVWGVVTAVFLGLVAWRSVLSSHEDDQIF
Ga0187770_109772771	3300018090	Tropical Peatland	METAENMLQGPMLYLLIAWGVVTAIFVILVAWRGVLASHEDDQ
Ga0066667_113180572	3300018433	Grasslands Soil	MDSQFLSGPLLYLLIAWGVATAVFLGLLFRRSLLSS
Ga0193753_102921132	3300020034	Soil	MDVESTLTGPISYLLIAWGVITAVFVILLVRRTLLTNHEDDQIFLDPCQ
Ga0179592_100093261	3300020199	Vadose Zone Soil	MESIQGPVLYLLIACGVVTAAFLGLLIWKSLLESHEDDQIFLGTTEQH
Ga0210407_101558511	3300020579	Soil	METLTTGPIFYVLIAWGIVTAVFMLLLIRRSLLASHEDDQIF
Ga0210399_102641743	3300020581	Soil	MGESTPLPGPLLYLLIAWGVVTAVFLVLLLRRSLLASHEDDQIFLDGAQ
Ga0210399_111875231	3300020581	Soil	MDLGQTFTGPLLYIVIAWGIVTAVFLMLFLRRSLLASHEDDQIFLDSAQE
Ga0210401_110764691	3300020583	Soil	MEAPTLAGPILYLLFAWGAITAIFIGLLIWRSLLTS
Ga0210404_101664311	3300021088	Soil	MDSQMLTGPLLYLLIAWGVVTAVFLGLLFRRSLLSSHEDDQIFLDAAE
Ga0210404_103332141	3300021088	Soil	MDAMESAFSGPLMYLLIVWGVVTAVFLLLIAWRSVLSSHE
Ga0210405_109494821	3300021171	Soil	MGEALTGPILYLLIVWGIITATFLALLLWRSILTT
Ga0210393_115394271	3300021401	Soil	METLTTGPIFYVLIAWGIVTAVFMLLLIRRSLLASHEDD
Ga0210387_109496182	3300021405	Soil	MENLESLLTGPTMWLLITWGAVTAIFLVLIAWRSLLSSHEDDQIFLDAA
Ga0210386_106593211	3300021406	Soil	MEATLTGPILYLLIVWGIITATFLALLLWRSILTTHEDDQL
Ga0210383_109373271	3300021407	Soil	MEHLTTGPIFYVLIAWTIVTAVFMLLLIRRSLLASHEDDQIFLDAAQE
Ga0210394_112913272	3300021420	Soil	MEATLTGPILYLLIVLGIVTAIFLALLLWRSILTTHEDDQLCID
Ga0210384_110617101	3300021432	Soil	MGEALTGPILYLLIVWGIITATFLALLLWRSILTTHEDDQLCIDAAGEHLA
Ga0210390_115707211	3300021474	Soil	MDAIEGLLKGPFLYLLITWGVVTAIFLLLVIWRSVLASHEDDQIFL
Ga0210392_101522794	3300021475	Soil	MDAMESTLTGPVLYLMVAWGAVTAVFVGLLIWRSLL
Ga0210409_113923212	3300021559	Soil	METTLTGPILYLLIVWGIITVVFIGLLMWRSLLASHEDDQIFL
Ga0126371_122256482	3300021560	Tropical Forest Soil	MDAIEGLLKGPFLYLLITWGVVTAIFLILVIWRSVLASHEDD
Ga0179589_105712592	3300024288	Vadose Zone Soil	METLTGPILYLLIVWGILTATFLALLLWRSILTTHEDDQL
Ga0207692_105883011	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDAMESTLTGPILYLLFAWGAITAVFIGLLIWRSLLTSHEDDQI
Ga0207657_114538821	3300025919	Corn Rhizosphere	MESLHLTGPLFYLTVAWGVVTAVFIGLLIWRSLLASHEDDQIFLD
Ga0207700_109095222	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	METLTGPIFYMLVAWGIVTAIFLVLLIWRSLLESHED
Ga0207704_101885683	3300025938	Miscanthus Rhizosphere	MSESTLTGPVLYMLIAWGIVTAVFLALLLWRNLLE
Ga0209647_12071782	3300026319	Grasslands Soil	MDAMGAAFSGPLMYLLVVWGVVTAVFLLLIAWRSVLSS
Ga0209131_13412331	3300026320	Grasslands Soil	MGETLTGPILYLLIVWGILTATFLALLLWRSILTTHEDDQLCIDAAG
Ga0209160_10781301	3300026532	Soil	MEATLTGPILYLLIVWGILVATFLALLLWRSILTTHEDDQLCIDAAGEHMA
Ga0209648_103440001	3300026551	Grasslands Soil	MEATLTGPILYLLIAWGIVTAIFLALLLWRSILTTHEDD
Ga0208365_10412742	3300027070	Forest Soil	MDPAPLTGPLLYLLIAWGVVTAIFLVLLLRRSLLASHE
Ga0209733_10594691	3300027591	Forest Soil	MEATLTGPILYLLIVWGILVATFLALLLWRSILTTHEDD
Ga0209733_11229652	3300027591	Forest Soil	METLTGPILYLLIVWGIVTATFLALLLWRSILTTHE
Ga0209076_10839281	3300027643	Vadose Zone Soil	MESQSLTGPLLYLLIVWGVVTAVFLVLLLRRSLLESHEDDQIFFD
Ga0209736_10103011	3300027660	Forest Soil	MESLDSVFSGPLLYLLIVWGVVTAIFLVLIAWRSLLAGHED
Ga0209180_102103733	3300027846	Vadose Zone Soil	MDAMEAVFKGPLLYLLIAWGVITLVFLLLVIWRSVLSSHEDDHIILDAA
Ga0209166_1000197416	3300027857	Surface Soil	MEATLTGPIYFLLIVWAIITGTFLALLLWRSILTTHEDDQLCIDASGEHVARE
Ga0209701_100434921	3300027862	Vadose Zone Soil	MESTLQGPVLYLLIAWGIVTAVFVILFIWRSVLSSHEDDQI
Ga0209701_105837631	3300027862	Vadose Zone Soil	MESTLQGPVLYLLIAWGIVTAVFVILFIWRSVLSSHEDDQIF
Ga0209283_103337242	3300027875	Vadose Zone Soil	MEATLTGPIMYLLIVWGIATATFLALLLWRSILTTHEDDQLCIDAAGE
Ga0209583_101982673	3300027910	Watersheds	MEATLTGPILYLLIVFGIVTATFLALLLWRSILTTHEDDQLCIDAASEHMA
Ga0209526_101048963	3300028047	Forest Soil	MEASTLTGPILYLLIVWGIVTATFLALLLWRSILTTHED
Ga0209526_101578862	3300028047	Forest Soil	MEATLTGPIMYLLIVWGIVTATFLALLLWRSILTTHEDDQLCIDAAGE
Ga0247663_10237381	3300028145	Soil	METLTGPILYVLIAWGIVTAIFMMLLIRRSLLASHEDDQIFLDAS
Ga0137415_107978852	3300028536	Vadose Zone Soil	MGESQSLTGPLLYLLIAWGVVTAVFLVLLLRRSLLESHEDDQIFLDA
Ga0308309_115471032	3300028906	Soil	METITGPILYLLIVWGVITVVFIGLLMWRSLLASHEDDQIFLGS
Ga0170834_1025783292	3300031057	Forest Soil	MESMGAAFSGPLLYLLIVWGVVTAIFLLLIAWRSVLSSH
(restricted) Ga0255310_100437361	3300031197	Sandy Soil	MEAMESLLSGPMMYLLIAWGLVTAIFLVLVIWRSVLSSHEDD
Ga0310915_107693573	3300031573	Soil	MEQLEGVFTGPTLYLTVVWGVVTAIFLILVAWRSVLS
Ga0307468_1018457991	3300031740	Hardwood Forest Soil	MDPMGQAFSGPLLYLLIVWGVVTAIFLLLIAWRSVLSS
Ga0318492_106096382	3300031748	Soil	MEQVEELFQGTTLYLTVIWGVVTAIFLILVAWRSVLSSHED
Ga0318492_107353471	3300031748	Soil	MEQLEGVFTGPTLYLTVVWGVVTAIFLILVAWRSVLSSH
Ga0318554_105683011	3300031765	Soil	MEQVEELFQGTTLYLTVVWGVVTAIFLVLVAWRSVLSSHEDDQIFIDAAQEH
Ga0310909_112972172	3300031947	Soil	MEQLESAFSGPLLYLLIGWGVVTAVFLVLVAWRSVLA
Ga0306926_128931421	3300031954	Soil	MESALQGPILYLLIACGVVTAAFLALVIWRSLLESHEDDQIFLDAAEQHMAR
Ga0307479_103055074	3300031962	Hardwood Forest Soil	MDPQTLTGPLLYLLIAWGVVTAVFLVLLLRRSLLASHEDDQIFLDAAQ
Ga0310911_100270734	3300032035	Soil	MSESTLTGPVLYTLIAWGIVTAVFLALVIWRNLLESHEDDQLFLDA
Ga0318533_113962792	3300032059	Soil	MEQQVQEVFQGTTLYLTVIWGVVTAIFLVLVAWRSVLSS
Ga0306924_109738713	3300032076	Soil	MDAIEALLKGPFLYLLITWGVVTAIFLILVIWRSVLSS
Ga0335082_101487751	3300032782	Soil	MNPDMGAAFNGPLLYLLVAWGLVTAIFLVLIAWRSVLSSHEDDQIFL
Ga0335078_108426862	3300032805	Soil	MGEMEAVFQGPMLYLLIIWGVVTAVFLALVAWRSVLSSHEDDQIC
Ga0335081_102199181	3300032892	Soil	MEAMESAFTGPLLYLLIGWGVVTVLFLVLVAWRSVLTSHEDDQIFL
Ga0335073_109002972	3300033134	Soil	MDAMESAFSGPLLYLLIVWGVVTAIFLILIAWRSVLYSQEDDQIFIDYAQEHI
Ga0318519_109996621	3300033290	Soil	MEQQVQEVFQGTTLYLTVIWGVVTAIFLVLVAWRSVL
Ga0326727_102329401	3300033405	Peat Soil	MPIESMFTGSMLYLLIAWGLVTAIFLILIAWRSVLSSHEDDQIFLD
Ga0326727_104966663	3300033405	Peat Soil	MEAMESAFSGPLLYLLITWGVVTAIFLLLIAWRSVLSSHEDDQIF
Ga0326724_0017234_1_126	3300034091	Peat Soil	MESVESVLSGPMLYLLIVWGIVTAIFIILVAWRGVLASHEDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters