NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F039610

Metagenome / Metatranscriptome Family F039610

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F039610
Family Type Metagenome / Metatranscriptome
Number of Sequences 163
Average Sequence Length 49 residues
Representative Sequence MSRTTTKWLVLASLTLAGLTSAACTRTDATGPSDQPAPSFETQGANN
Number of Associated Samples 133
Number of Associated Scaffolds 163

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 68.10 %
% of genes near scaffold ends (potentially truncated) 27.61 %
% of genes from short scaffolds (< 2000 bps) 77.30 %
Associated GOLD sequencing projects 125
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (76.687 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.791 % of family members)
Environment Ontology (ENVO) Unclassified
(23.926 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(31.288 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 32.00%    β-sheet: 0.00%    Coil/Unstructured: 68.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 163 Family Scaffolds
PF12833HTH_18 8.59
PF00072Response_reg 5.52
PF02954HTH_8 4.29
PF13411MerR_1 3.07
PF12019GspH 2.45
PF01435Peptidase_M48 1.84
PF04264YceI 1.23
PF13458Peripla_BP_6 0.61
PF13641Glyco_tranf_2_3 0.61
PF07963N_methyl 0.61
PF03951Gln-synt_N 0.61
PF05324Sperm_Ag_HE2 0.61
PF01713Smr 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 163 Family Scaffolds
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 1.23
COG0174Glutamine synthetaseAmino acid transport and metabolism [E] 0.61


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.69 %
UnclassifiedrootN/A23.31 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps__Contig_186530All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4016Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105561315Not Available1317Open in IMG/M
3300000890|JGI11643J12802_11588918Not Available520Open in IMG/M
3300000956|JGI10216J12902_101972030All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium627Open in IMG/M
3300000956|JGI10216J12902_114227534Not Available737Open in IMG/M
3300000956|JGI10216J12902_122305886Not Available635Open in IMG/M
3300003267|soilL1_10015091All Organisms → cellular organisms → Bacteria6033Open in IMG/M
3300003319|soilL2_10009087All Organisms → cellular organisms → Bacteria4470Open in IMG/M
3300003321|soilH1_10297779All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1118Open in IMG/M
3300003324|soilH2_10140089All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2521Open in IMG/M
3300004157|Ga0062590_101165482Not Available748Open in IMG/M
3300004643|Ga0062591_101107747Not Available763Open in IMG/M
3300004785|Ga0058858_1128859All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes675Open in IMG/M
3300004803|Ga0058862_12048479All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes748Open in IMG/M
3300004808|Ga0062381_10097263All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes915Open in IMG/M
3300005093|Ga0062594_100566005All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium984Open in IMG/M
3300005172|Ga0066683_10670313Not Available619Open in IMG/M
3300005206|Ga0068995_10026552All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium936Open in IMG/M
3300005332|Ga0066388_100723557All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300005445|Ga0070708_100018321All Organisms → cellular organisms → Bacteria5861Open in IMG/M
3300005518|Ga0070699_101488143All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005526|Ga0073909_10485502Not Available595Open in IMG/M
3300005562|Ga0058697_10122980All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1103Open in IMG/M
3300005564|Ga0070664_100272433All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1525Open in IMG/M
3300005577|Ga0068857_100347512All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1373Open in IMG/M
3300005618|Ga0068864_100010977All Organisms → cellular organisms → Bacteria7489Open in IMG/M
3300005618|Ga0068864_100805064All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes924Open in IMG/M
3300005841|Ga0068863_102151011All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium568Open in IMG/M
3300005844|Ga0068862_102043570Not Available584Open in IMG/M
3300005874|Ga0075288_1000016All Organisms → cellular organisms → Bacteria17205Open in IMG/M
3300005874|Ga0075288_1014483All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1076Open in IMG/M
3300005877|Ga0075296_1000189All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2231Open in IMG/M
3300005884|Ga0075291_1002693All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1910Open in IMG/M
3300005887|Ga0075292_1057995Not Available570Open in IMG/M
3300005887|Ga0075292_1061836All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium555Open in IMG/M
3300005889|Ga0075290_1047211All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium587Open in IMG/M
3300006605|Ga0074057_10226715Not Available530Open in IMG/M
3300006755|Ga0079222_10009882All Organisms → cellular organisms → Bacteria3415Open in IMG/M
3300006755|Ga0079222_11301446All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium662Open in IMG/M
3300006755|Ga0079222_12584204Not Available510Open in IMG/M
3300006796|Ga0066665_10621727All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium864Open in IMG/M
3300006806|Ga0079220_10248921All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1062Open in IMG/M
3300006806|Ga0079220_11536605Not Available573Open in IMG/M
3300006844|Ga0075428_101523647All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium700Open in IMG/M
3300006845|Ga0075421_100021888All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium8046Open in IMG/M
3300006846|Ga0075430_100096206All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2475Open in IMG/M
3300006852|Ga0075433_10040077All Organisms → cellular organisms → Bacteria4053Open in IMG/M
3300006853|Ga0075420_100576565All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium971Open in IMG/M
3300006854|Ga0075425_100330085All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1756Open in IMG/M
3300006871|Ga0075434_101455630All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium695Open in IMG/M
3300006904|Ga0075424_100662120All Organisms → cellular organisms → Bacteria1115Open in IMG/M
3300007076|Ga0075435_100230655All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1573Open in IMG/M
3300009012|Ga0066710_100197077All Organisms → cellular organisms → Bacteria2862Open in IMG/M
3300009090|Ga0099827_10100613All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2297Open in IMG/M
3300009090|Ga0099827_11571498All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium573Open in IMG/M
3300009137|Ga0066709_100028923All Organisms → cellular organisms → Bacteria5820Open in IMG/M
3300009162|Ga0075423_12487920Not Available565Open in IMG/M
3300009789|Ga0126307_10196130All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1620Open in IMG/M
3300010038|Ga0126315_11220389Not Available511Open in IMG/M
3300010039|Ga0126309_10340516All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium879Open in IMG/M
3300010044|Ga0126310_11732447Not Available520Open in IMG/M
3300010146|Ga0126320_1111874Not Available575Open in IMG/M
3300010166|Ga0126306_11628911All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium538Open in IMG/M
3300010371|Ga0134125_10989748Not Available922Open in IMG/M
3300010373|Ga0134128_12346385Not Available588Open in IMG/M
3300010396|Ga0134126_10090144All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium3782Open in IMG/M
3300011332|Ga0126317_10394604All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium608Open in IMG/M
3300011333|Ga0127502_10700282All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium786Open in IMG/M
3300011431|Ga0137438_1068802All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1062Open in IMG/M
3300012212|Ga0150985_100380352Not Available823Open in IMG/M
3300012212|Ga0150985_102759962All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium3226Open in IMG/M
3300012212|Ga0150985_105889714All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1253Open in IMG/M
3300012212|Ga0150985_112077671All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium766Open in IMG/M
3300012212|Ga0150985_121439527Not Available914Open in IMG/M
3300012355|Ga0137369_10666259Not Available718Open in IMG/M
3300012360|Ga0137375_10093527All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium3087Open in IMG/M
3300012469|Ga0150984_101431907All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium895Open in IMG/M
3300012469|Ga0150984_106458153All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium844Open in IMG/M
3300012469|Ga0150984_107965159All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2560Open in IMG/M
3300012469|Ga0150984_114239957All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium839Open in IMG/M
3300012469|Ga0150984_114976880All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium877Open in IMG/M
3300012917|Ga0137395_10509869All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium866Open in IMG/M
3300012922|Ga0137394_10344621All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1272Open in IMG/M
3300012929|Ga0137404_10268166All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1471Open in IMG/M
3300012931|Ga0153915_10455718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1456Open in IMG/M
3300012957|Ga0164303_10282093All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes969Open in IMG/M
3300012958|Ga0164299_10989254Not Available619Open in IMG/M
3300015086|Ga0167655_1007274All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2276Open in IMG/M
3300015373|Ga0132257_100056519All Organisms → cellular organisms → Bacteria4390Open in IMG/M
3300015374|Ga0132255_100275559All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2412Open in IMG/M
3300017695|Ga0180121_10434040All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium513Open in IMG/M
3300017997|Ga0184610_1298488Not Available531Open in IMG/M
3300018027|Ga0184605_10099572All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1282Open in IMG/M
3300018027|Ga0184605_10421691All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium592Open in IMG/M
3300018059|Ga0184615_10469273Not Available681Open in IMG/M
3300018061|Ga0184619_10092412All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1353Open in IMG/M
3300018071|Ga0184618_10051445All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1499Open in IMG/M
3300018431|Ga0066655_10419019Not Available883Open in IMG/M
3300018465|Ga0190269_10371470All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium871Open in IMG/M
3300018466|Ga0190268_10659778All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium757Open in IMG/M
3300019254|Ga0184641_1006378All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1010Open in IMG/M
3300019255|Ga0184643_1229875All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium845Open in IMG/M
3300019255|Ga0184643_1379347Not Available718Open in IMG/M
3300019269|Ga0184644_1071688All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium727Open in IMG/M
3300021078|Ga0210381_10104471All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes923Open in IMG/M
3300025327|Ga0209751_10792552All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes740Open in IMG/M
3300025910|Ga0207684_11208302Not Available626Open in IMG/M
3300025939|Ga0207665_10485114All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300025993|Ga0208415_1001376All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2145Open in IMG/M
3300025996|Ga0208777_1011307All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium756Open in IMG/M
3300025998|Ga0208651_1009856Not Available753Open in IMG/M
3300026000|Ga0208143_102548Not Available686Open in IMG/M
3300026004|Ga0208416_1002880All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1289Open in IMG/M
3300026020|Ga0208531_1000690All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2684Open in IMG/M
3300026075|Ga0207708_11566098All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium579Open in IMG/M
3300026088|Ga0207641_10132786All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2237Open in IMG/M
3300026095|Ga0207676_10013848All Organisms → cellular organisms → Bacteria5790Open in IMG/M
3300026095|Ga0207676_10023221All Organisms → cellular organisms → Bacteria4572Open in IMG/M
3300027775|Ga0209177_10131690All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium829Open in IMG/M
3300027778|Ga0209464_10067707All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1193Open in IMG/M
3300027843|Ga0209798_10000773All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes19632Open in IMG/M
3300027909|Ga0209382_10146637All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2737Open in IMG/M
3300028720|Ga0307317_10187016All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium698Open in IMG/M
3300028771|Ga0307320_10087437All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1176Open in IMG/M
3300028784|Ga0307282_10014652All Organisms → cellular organisms → Bacteria3209Open in IMG/M
3300028799|Ga0307284_10006013All Organisms → cellular organisms → Bacteria3428Open in IMG/M
3300028799|Ga0307284_10453706All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium525Open in IMG/M
3300028814|Ga0307302_10136459All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1184Open in IMG/M
3300028824|Ga0307310_10065868All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1545Open in IMG/M
3300028824|Ga0307310_10559322All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes580Open in IMG/M
3300028881|Ga0307277_10455753All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium573Open in IMG/M
3300028885|Ga0307304_10201506All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium852Open in IMG/M
3300030904|Ga0308198_1053424Not Available631Open in IMG/M
3300030904|Ga0308198_1062498All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium597Open in IMG/M
3300030990|Ga0308178_1107012Not Available600Open in IMG/M
3300030993|Ga0308190_1148347Not Available556Open in IMG/M
3300031093|Ga0308197_10238864Not Available639Open in IMG/M
3300031093|Ga0308197_10313041Not Available583Open in IMG/M
3300031094|Ga0308199_1104102All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium629Open in IMG/M
3300031098|Ga0308191_1044534All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium502Open in IMG/M
3300031114|Ga0308187_10163553All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium752Open in IMG/M
3300031114|Ga0308187_10217982All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium677Open in IMG/M
(restricted) 3300031197|Ga0255310_10230066All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes523Open in IMG/M
3300031421|Ga0308194_10197234All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium649Open in IMG/M
3300031548|Ga0307408_100043063All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium3211Open in IMG/M
3300031548|Ga0307408_100170794All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1736Open in IMG/M
3300031720|Ga0307469_10878152Not Available829Open in IMG/M
3300031731|Ga0307405_11841270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium539Open in IMG/M
3300031824|Ga0307413_10041495All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2695Open in IMG/M
3300031824|Ga0307413_10257188All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1299Open in IMG/M
3300031852|Ga0307410_10019221All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium4151Open in IMG/M
3300031903|Ga0307407_11394799Not Available552Open in IMG/M
3300031903|Ga0307407_11460643All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium540Open in IMG/M
3300031938|Ga0308175_100009189All Organisms → cellular organisms → Bacteria7322Open in IMG/M
3300031938|Ga0308175_100634531All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1153Open in IMG/M
3300031939|Ga0308174_11975380Not Available502Open in IMG/M
3300031965|Ga0326597_10004202All Organisms → cellular organisms → Bacteria20330Open in IMG/M
3300031965|Ga0326597_10267363All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1963Open in IMG/M
3300032002|Ga0307416_100394968All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1418Open in IMG/M
3300033412|Ga0310810_10014411All Organisms → cellular organisms → Bacteria9366Open in IMG/M
3300033551|Ga0247830_10251791All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1338Open in IMG/M
3300034099|Ga0373902_025939All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1126Open in IMG/M
3300034644|Ga0370548_125214All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium540Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.79%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil7.98%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.75%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.52%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.29%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.29%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.68%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.07%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.07%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.07%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere3.07%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.07%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil2.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.45%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.84%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.84%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.23%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated1.23%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.23%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.61%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.61%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.61%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.61%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.61%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.61%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.61%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.61%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.61%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.61%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004785Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004808Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1FreshEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005206Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005877Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404EnvironmentalOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300005887Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403EnvironmentalOpen in IMG/M
3300005889Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010146Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300015086Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025993Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300025996Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)EnvironmentalOpen in IMG/M
3300025998Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204 (SPAdes)EnvironmentalOpen in IMG/M
3300026000Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026004Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)EnvironmentalOpen in IMG/M
3300026020Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031098Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034099Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3EngineeredOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
deeps_035181502199352024SoilSGARQIRATPAPYHQMKGFPMSRITTKWLVLASLTLAGLTTSACTRNDATGPSDQPKPSFEGQGSNT
INPhiseqgaiiFebDRAFT_10556131523300000364SoilMSRTTTKWLVLASLALAGLTTTACTRSDATGPSDQPQPSFEGQGANN*
JGI11643J12802_1158891823300000890SoilMKGFPMSRITTKWLLLASLTLAGLTTSACTRTDATGPSDQPKPSFEGQGSNT*
JGI10216J12902_10197203023300000956SoilMSRSTTKWLAIASLTLATLTSAACTRSDATGPSESTTPAFETQGANN*
JGI10216J12902_11422753423300000956SoilMSRPTTKWILLASLALAALTSTACTRNDTTGPSDQTAPSFEGQGANNGPHP*
JGI10216J12902_12230588623300000956SoilAMSRTTTKWLVLASLALAGLTTAACTRSDATGPSDQPQPSFEGQGANN*
soilL1_1001509163300003267Sugarcane Root And Bulk SoilMSRSTKWILIASLTIAGITSSACTRMDATGPSDQTVPAFETQGANN*
soilL2_1000908743300003319Sugarcane Root And Bulk SoilMKGFPMSRLTTKWLVLASLTVAGLASTACTRSDATGPSDQPKPSLEGQGAHN*
soilH1_1029777923300003321Sugarcane Root And Bulk SoilMKGYPMSRISTKWLVIASLTLAGLTSSACTRSDATGPSDQPKPSLEGQGAHN*
soilH2_1014008913300003324Sugarcane Root And Bulk SoilMKGYPMSRISTKWLVIASLTLAGLTSSACTRSDATGPSDQPQPSFEGQGANN*
Ga0062590_10116548223300004157SoilMSRTTTRWILLASLTIAGITSAACTRNDAMGPSDQTAPAFENQGSNN*
Ga0062591_10110774723300004643SoilRITTKWLLLASLTLAGLTTSACTRTDATGPSDQPKPSFEGQGSNT*
Ga0058858_112885913300004785Host-AssociatedLALPPKPTRPLKGKIMSRTATKWVVLVSLTLAAITSTACTRGDATGPSDQPAPSFEAQGANN*
Ga0058862_1204847923300004803Host-AssociatedMSRSTTKWLAIASLTLATLTSAACTRSDATGPSESTAPSFETQGANN*
Ga0062381_1009726313300004808Wetland SedimentMSRTTTKWLAIVTLTLAALTSAACTRTDATGPSESSAPAFETQGANN*
Ga0062594_10056600523300005093SoilMSRRTAQWFAIASLVLASFTTACTRSDATGPSADQTAPSFEGQGANN*
Ga0066683_1067031313300005172SoilMSRPTTKWLVLASLTLAALSSSACTRSDATGPSDQPAPSFEGQ
Ga0068995_1002655213300005206Natural And Restored WetlandsMSLPTTKWIVLATLTVAALTSTACTRTDATGPSDQTAPSFEGQGANNGPRP*
Ga0066388_10072355723300005332Tropical Forest SoilMSRPATKWIVLASLALATLTSTACTKADATGPSDQQAPSFETQGANN*
Ga0070708_10001832153300005445Corn, Switchgrass And Miscanthus RhizosphereMSRPTTKWLVLASLTLAALSSSACTRSDATGPSDQPAPSFEGQGSNN*
Ga0070699_10148814323300005518Corn, Switchgrass And Miscanthus RhizosphereMTRSTTKWLVLASLTLAGLTSTACTRADATGPSDQPAPSFEGQGANN*
Ga0073909_1048550223300005526Surface SoilLAMSRTTTKWLVLASLALAGLTTTACTRSDATGPSDQPQPSFEGQGANN*
Ga0058697_1012298023300005562AgaveMKGYLMSRTATKWLVLASLAFAGLTSAACTRNDATGPSDQPAPSFETQGANN*
Ga0070664_10027243323300005564Corn RhizosphereMKGFPMSRITTKWLVLASLTLAGLTTSACTRNDATGPSDQPKPSFEGQGSNT*
Ga0068857_10034751223300005577Corn RhizosphereMSRTTTKWLVLASLTLAGLTTSACTRNDATGPSDQPKPSFEGQGAHN*
Ga0068864_10001097763300005618Switchgrass RhizosphereMSRTTTKWLVLASLTLAGLTTTACTRNDATGPSDQPKPSFEGQGAHN*
Ga0068864_10080506423300005618Switchgrass RhizosphereMPRSTTKWLAIASLTLATLTSAACTRSDATGPSESTTPAFETQGANN*
Ga0068863_10215101113300005841Switchgrass RhizosphereGARQIGATPAPYRQMKGFPMSRITTKWLVLASLTLAGLTTSACTRNDATGPSDQPKPSFEGQGSNT*
Ga0068862_10204357023300005844Switchgrass RhizosphereMSRTATKWLVLASLTLAALTSSACTRTDATGPSDQPAPSFEGQGSNN*
Ga0075288_100001623300005874Rice Paddy SoilMSRPTTKWIVLASLTLAAITSTACTRNDATGPSEQTAPSFEVQGGNN*
Ga0075288_101448313300005874Rice Paddy SoilMKGYPMSRISTKWLVIASLTLAGLTSAACTRGDATGPSDQPQPSFEGQGANN*
Ga0075296_100018923300005877Rice Paddy SoilMSRPTTKWIVLASLTLAAITSTACTRNDATGPSEQTAPSFEAQGGNN*
Ga0075291_100269323300005884Rice Paddy SoilMSRISTKWLVIASLTLAGLTSAACTRGDATGPSDQPQPSFEGQGANN*
Ga0075292_105799523300005887Rice Paddy SoilMPRATTKWLVIASLTLAAATTACTRGDATGPSDQPAASFEAQGANN*
Ga0075292_106183623300005887Rice Paddy SoilTPAPYRQMKGYPMSRISTKWLVIASLTLAGLTSAACTRGDATGPSDQPQPSFEGQGANN*
Ga0075290_104721123300005889Rice Paddy SoilPDTANRKEIPMPRATTKWLVIASLTLAAATTACTRGDATGPSDQPAASFEAQGANN*
Ga0074057_1022671513300006605SoilMSRTTTKWLVLASLTLAGLSSAACTRNDATGPSEQPKPSFEGQGANN
Ga0079222_1000988253300006755Agricultural SoilMSRITTKWLVLASLTLAGLTTAACTRSDATGPSDQPKPSFDEGQGARN*
Ga0079222_1130144623300006755Agricultural SoilSRITTKWLVVAALTLAGLTSAACTSIDATGPSDQPKPSFEGRGSYN*
Ga0079222_1258420423300006755Agricultural SoilMKGYPMSRITTKWLVLASLTLAGLTSAACTRSDATGPSDQPQPSFETQGANN*
Ga0066665_1062172723300006796SoilMPSTTKWLVIASLAAATLTSAACTRTDATGPSEQSAPSFETQGSNN*
Ga0079220_1024892113300006806Agricultural SoilNPQTKGYPMSRIPTKWLVIASLSLAGLTSAACTRSDATGPSDQPQTSFEIQGANN*
Ga0079220_1153660513300006806Agricultural SoilMKGLPMSRITTKWLVLASLTLAGLASTACTRSDATGPSDQPKPSFDEGQGARN*
Ga0075428_10152364723300006844Populus RhizosphereMSRTATKWIVLASLTLAAFGSAACTRSDATGPSDQPARSFEAQGANN*
Ga0075421_10002188823300006845Populus RhizosphereMSRTATKWIVLASLTLAAFGSAACTRSDATGPSDQPAPSFEAQGANN*
Ga0075430_10009620623300006846Populus RhizosphereMSRTATKWIVLASLTLAAFGSAACTRSDATGPSDQPAPSFEAKGANN*
Ga0075433_1004007753300006852Populus RhizosphereMSRTTTKWLVLASLTLAGLTSAACTRTDATGPSDQPAPSFETQGANN*
Ga0075420_10057656523300006853Populus RhizosphereLKGKTMSRTATKWIVLASLTLAAFGSAACTRSDATGPSDQPAPSFEAQGANN*
Ga0075425_10033008523300006854Populus RhizosphereMSRPATKWIVLASLTLAALTSTACTRNDTTGPSDQTTPSFEGQGANNGPHP*
Ga0075434_10145563013300006871Populus RhizosphereMSRLTTQWLVLASLALAGLTTSACTRNDATGPSDQPSFEGQGSNTSPPRP*
Ga0075424_10066212013300006904Populus RhizosphereMSRITTKWLVLASLTLAGLTTSACTRNDATGPSDQPK
Ga0075435_10023065543300007076Populus RhizosphereMSRPTTKWLVLASLTLAALSSSACTRSDATGPSDQPAP
Ga0066710_10019707743300009012Grasslands SoilMPSTTKWLVIASLAAATLTSAACTRTDATGPSEQSAPSFETQGSNN
Ga0099827_1010061323300009090Vadose Zone SoilMPCATTKWLVIASLAAATLTSAACTRTDATGPSEQSAPSFEGQGANN*
Ga0099827_1157149823300009090Vadose Zone SoilMPRPTTKWLVIASLAAATLTSAACTRTDATGPSEQSAPSFENQGSNN*
Ga0066709_10002892353300009137Grasslands SoilMSRPTTKWLVLASLTLAALSTSACTRSDATGPSDQPAPSFEGQGSNN*
Ga0075423_1248792023300009162Populus RhizosphereMSRTATKWIVLASLTLAAFGSAACTRSDATGPSDQPAPSFE
Ga0126307_1019613023300009789Serpentine SoilMSRKTTKWVAIVSLTLATVTSTACTRTDATGPSEPVAPALENQGSNN*
Ga0126315_1122038923300010038Serpentine SoilMAHSTTKWLAIASLTVATLTSAACTRSDATGPSEPVAPAFETQGANN*
Ga0126309_1034051623300010039Serpentine SoilMSRTITKWLALASLTLAALTSTACTRNDATGPSDQVAPAFENQGSNN*
Ga0126310_1173244723300010044Serpentine SoilMSRTTTKWVAIASLTLATLTSAACTRSDATGPSEPVAPAFENQGS
Ga0126320_111187413300010146SoilKGFPMPRPTMKWLVIASLTAATFTSAACTRTDATGPSEQQAPSFETQGSNN*
Ga0126306_1162891123300010166Serpentine SoilAIASLTLATLTSAACTRSDATGPSEPPTPVFENQGGNN*
Ga0134125_1098974813300010371Terrestrial SoilMSRTATKWLVFASLAFAAITSAACTRSDATGPSDQPAASFETQGANN*
Ga0134128_1234638523300010373Terrestrial SoilGLAMSRTTTKWLVLASLALAGLTTTACTRSDATGPSDQPQPSFEGQGANN*
Ga0134126_1009014423300010396Terrestrial SoilMSRRTAQWFAIASLVLAGFTTACTRSDATGPSADQTAPSFEGQGANN*
Ga0126317_1039460423300011332SoilMSRTTTKWLVLASLTMAALTSAACTRNDATGPSDQTTPSFENQGSNN*
Ga0127502_1070028223300011333SoilMSRATTKWIMIASLILASATTACTRSDATGPSDQPAASFDEAQGANN*
Ga0137438_106880223300011431SoilMSRTATKWLAIASLTLATLTSAACTRSDATGPSESTTPAFETQGANN*
Ga0150985_10038035223300012212Avena Fatua RhizosphereMKWLVIASLTAATFTSAACTRTDATGPSEQQAPSFETQGSNN*
Ga0150985_10275996243300012212Avena Fatua RhizosphereMSRTTTKWLGLASLTMAALTSAACTRNDATGPSEQTTPSFENQGSNN*
Ga0150985_10588971423300012212Avena Fatua RhizosphereLALLPKPTRPLKGKIMSRTATKWVVLVSLTLAAITSTACTRGDATGPSDQPAPSFEAQGANN*
Ga0150985_11207767123300012212Avena Fatua RhizosphereLALLPKPTRPLKGKIMSRTATKWVVLVSLTLAAITSTACTRSDATGPSDQSAPSFEAQGANN*
Ga0150985_12143952723300012212Avena Fatua RhizosphereMPRSITKWLAIASLTLATLTSAACTRSDATGPSESTTPAFEQQGGNN*
Ga0137369_1066625923300012355Vadose Zone SoilMKGYPMSRTTTKWLALASLTLAALTSAACTRSDATGPSDQPTPAFENQGSNN*
Ga0137375_1009352723300012360Vadose Zone SoilMPRSTTKWLVLASLAAATFTSAACTRTDATGPSEQSAPSFENQGSNN*
Ga0150984_10143190723300012469Avena Fatua RhizosphereMKLLVIASLAAATLTSAACTRTDATGPSEQQAPSFETQGSNN*
Ga0150984_10645815323300012469Avena Fatua RhizosphereLALPPKPTRPLKGKIMSRTATKWVVLVSLTLAAITSTACTRSDATGPSDQSAPSFEAQGANN*
Ga0150984_10796515923300012469Avena Fatua RhizosphereMSRTTTKWLVLASLTMAALTSAACTRNDATGPSEQTTPSFENQGSNN*
Ga0150984_11423995723300012469Avena Fatua RhizosphereATRSSERDTPMSHRTTKWLVIASLAAATIASAACTRTDATGPSEQSAPSFETQGSNN*
Ga0150984_11497688013300012469Avena Fatua RhizosphereVVLVSLTLAAITSTACTRGDATGPSDQPAPSFEAQGANN*
Ga0137395_1050986923300012917Vadose Zone SoilMSRPTTKWLVIASLAAATLTSAACTRTDATGPSEQSAPSFENQGSNN*
Ga0137394_1034462123300012922Vadose Zone SoilMSRTTTKWLAIASLSLATLTSAACTRSDATGPSEPITPAFETQGANN*
Ga0137404_1026816623300012929Vadose Zone SoilMSRTSTKWLVLASLTLAALTSSACTRSDATGPSDQPAPSFEGQGSNN*
Ga0153915_1045571813300012931Freshwater WetlandsMPRSTTKWLVIASLTLAAAATTACTRSDATGPSDQPAP
Ga0164303_1028209323300012957SoilMSRTTTKWLVLASLTLAGLSSAACARNDATGPSEQPKPSFEGQ
Ga0164299_1098925413300012958SoilADWRYPRTPYRQMKGFPMSRTTTKWLVLASLTLSGLATSACTRNDATGPSDQPKPSFDEGQGAHN*
Ga0167655_100727433300015086Glacier Forefield SoilMTRSTTKWLVIASLTLAGLTSSACTRADATGPSDQPTPSFEGQGSNN*
Ga0132257_10005651963300015373Arabidopsis RhizosphereMSRTTTKWIVLASLALAGLTTTACTRSDATGPSDQPQPSFEGQGANN*
Ga0132255_10027555943300015374Arabidopsis RhizosphereMSRITTKWLVLASLTLAGLTTSACTRNDATGPSDQPKPSFEGQGSNT*
Ga0180121_1043404023300017695Polar Desert SandMSRTTTKWIALASLTLAALTSTACTRSDATGPSDPIAPAFENQGSNN
Ga0184610_129848823300017997Groundwater SedimentMSRSTTKWLAIASLTLATLTSAACTRSDATGPSEVTTPAFENQGGNN
Ga0184605_1009957223300018027Groundwater SedimentMSRTTTKWLAIASLTLATLTSAACTRSDATGPSESVTPSFEGQGANN
Ga0184605_1042169123300018027Groundwater SedimentMPRSTTKWLVIASLAVATLTSAACTRTDATGPSEQAAPSFENQGSNN
Ga0184615_1046927323300018059Groundwater SedimentMSRTTTKWLAIASLTLATLTSAACTRSDATGPSEPTTPAFETQGANN
Ga0184619_1009241223300018061Groundwater SedimentMPHPTTKWLVIASLAAATLTSAACTRTDATGPSEQPAPSFENQGSNN
Ga0184618_1005144523300018071Groundwater SedimentMSRSTTKWLAIASLTLATLTSAACTRSDATGPSESTTPAFETQGANN
Ga0066655_1041901923300018431Grasslands SoilMSRPTTKWLVLASLTLAALSSSACTRSDATGPSDQPAPSFEGQGSNN
Ga0190269_1037147013300018465SoilMPRSSTKWLAIASLTLATLTSAACTRSDATGPSEPTTPAFETQGGNN
Ga0190268_1065977813300018466SoilTMSRSTTKWLAIASLTLATLTSAACTRSDATGPSESITPVFENQGGNN
Ga0184641_100637823300019254Groundwater SedimentSSERNPPMPRSTTKWLVIASLAVATLTSAACTRTDATGPSEQAAPSFENQGSNN
Ga0184643_122987513300019255Groundwater SedimentPYPRRQLKGNTMSRTTTKWLAIASLTLATLTSAACTRSDATGPSESVTPSFEGQGANN
Ga0184643_137934723300019255Groundwater SedimentMPHPTTKWLVIASLAAATLTSAACTRTDATGPSEQPAPSFEMQGSNN
Ga0184644_107168823300019269Groundwater SedimentLKGNIMSRSTTKWLAIVSLTLATLTSAACTRSDATGPSESTTPVFENQGSNN
Ga0210381_1010447123300021078Groundwater SedimentMSRSTTKWIAIASLTLATLTAAACTRSDATGPSEPTTPVFEGQGSNN
Ga0209751_1079255213300025327SoilRQLKGTAMPRSTTKWLVLASLALAGMTSTACTRSDATGPSDQVTPAFENQGSNN
Ga0207684_1120830223300025910Corn, Switchgrass And Miscanthus RhizosphereMSRPTTKWLVLASLTLAALSSSACTRSDATGPSDQPA
Ga0207665_1048511443300025939Corn, Switchgrass And Miscanthus RhizosphereTKWLVLASLTVAALTSSACTRSDATGPSDQPAPSFEGQGSNN
Ga0208415_100137623300025993Rice Paddy SoilMSRPTTKWIVLASLTLAAITSTACTRNDATGPSEQTAPSFEVQGGNN
Ga0208777_101130713300025996Rice Paddy SoilRQMKGYPMSRISTKWLVIASLTLAGLTSAACTRGDATGPSDQPQPSFEGQGANN
Ga0208651_100985623300025998Rice Paddy SoilMSRISTKWLVIASLTLAGLTSAACTRGDATGPSDQPQPSFEGQGANN
Ga0208143_10254823300026000Rice Paddy SoilMSRPTTKWIVLASLTLAAITSTACTRNDATGPSEQTAPSFEAQGGNN
Ga0208416_100288033300026004Rice Paddy SoilMKGYPMSRISTKWLVIASLTLAGLTSAACTRGDATGPSDQPQPSFEGQGANN
Ga0208531_100069033300026020Rice Paddy SoilMSRPTTKWIVLASLTLAAITSTACTRNDATGPSDQTAPSFEAQGGNN
Ga0207708_1156609823300026075Corn, Switchgrass And Miscanthus RhizosphereLALPPKPTRPLKGKIMSRTATKWVVLVSLTLAAITSTACTRGDATGPSDQPAPSFEAQGANN
Ga0207641_1013278613300026088Switchgrass RhizosphereMSRTTTKWLVLASLTLAGLTTSACTRNDATGPSDQPKPSFEGQGAHN
Ga0207676_1001384823300026095Switchgrass RhizosphereMSRTTTKWLVLASLTLAGLTTTACTRNDATGPSDQPKPSFEGQGAHN
Ga0207676_1002322163300026095Switchgrass RhizosphereMPRSTTKWLAIASLTLATLTSAACTRSDATGPSESTTPAFETQGANN
Ga0209177_1013169023300027775Agricultural SoilMSRITTKWLVLASLTLAGLTTAACTRSDATGPSDQPKPSFDEGQGARN
Ga0209464_1006770723300027778Wetland SedimentMSRTTTKWLAIVTLTLAALTSAACTRTDATGPSESSAPAFETQGANN
Ga0209798_10000773183300027843Wetland SedimentMPRSTTKWLVLASLALAGLTSTACTRGDATGPSEQPAPSFEGQGSNN
Ga0209382_1014663733300027909Populus RhizosphereMSRTATKWIVLASLTLAAFGSAACTRSDATGPSDQPAPSFEAQGANN
Ga0307317_1018701623300028720SoilMSSTTKWLAIASLTLATLTSAACTRSDATGPSESTTPAFENQGSNN
Ga0307320_1008743713300028771SoilPTPRRQLKGNIMSRSTTKWLAIVSLTLATLTSAACTRSDATGPSESTTPVFENQGSNN
Ga0307282_1001465263300028784SoilMSRTTTKWLAIASLTLATLTSAACTRSDATGPSESVTPSFEGQ
Ga0307284_1000601363300028799SoilMPRSTTKWLVIASLAAATVTSAACTRTDATGPSEQSAPSFENQGSNN
Ga0307284_1045370623300028799SoilMSRSTTKWLAIASLTLAALTSAACTHSDATGPSESTTPAFEQQGGNN
Ga0307302_1013645923300028814SoilMSRSTTKWLAIVSLTLATLTSAACTRSDATGPSESTTPVFENQGSNN
Ga0307310_1006586813300028824SoilPRSTTKWLVIASLAAATVTSAACTRTDATGPSEQSAPSFENQGSNN
Ga0307310_1055932213300028824SoilMPRSTTKWLAIASLTLATLTSAACTRSDATGPSESITPAFEGQGSNN
Ga0307277_1045575323300028881SoilMPRSTTKWLVIASLAAATVTSAACTRTDATGPSEQSAPSFENQGANN
Ga0307304_1020150623300028885SoilMPRRTTKWLVIVSLAAATLTSAACTRTDATGPSDQPAPSFETQGSNN
Ga0308198_105342413300030904SoilTHLKGPPMSHPTTKWLVIASLAAATLTSAACTRTDATGPSEQQAPSFETQGSNN
Ga0308198_106249813300030904SoilPDSMSPERDYPMPRSTTKWLVIASLAAATLTSAACTRTDATGPSDQPAPSLEMQGSNN
Ga0308178_110701233300030990SoilSSERNPPMPRTTTKWLVIASLAVATLSSAACTRTDATGPSEQQAPSFETQGSNN
Ga0308190_114834723300030993SoilMHRSTTKWLVIVSLAAATLTSAACTRTDATGPSEQQAPSFETQGSNN
Ga0308197_1023886423300031093SoilMPRTTTKWLVIASLAAATLTSAACTRTDATGPSEQQAPSFETQGSNN
Ga0308197_1031304123300031093SoilMTRTSTKWFALASLTLATLTSAACTRSDATGPSDQPAPSFEAQGANN
Ga0308199_110410213300031094SoilRLLKGKIMTRTSTKWFALASLTLATLTSAACTRSDATGPSDQPAPSFEAQGANN
Ga0308191_104453423300031098SoilKWLVIASLAAATLTSAACTRTDATGPSDQPAPSFEMQGSNN
Ga0308187_1016355323300031114SoilSERDSPMPRSTTKWLVIASLAAATVTSAACTRTDATGPSEQSAPSFENQGANN
Ga0308187_1021798213300031114SoilRRQLKGNIMSRSTTKWLAIVSLTLATLTSAACTRSDATGPSESTTPVFENQGSNN
(restricted) Ga0255310_1023006623300031197Sandy SoilMSRTTSKWLAIVTLALATLTSAACTRTDATGPSESSAPAFETQGANN
Ga0308194_1019723413300031421SoilMSHPTTKWLVIASLAAATLTSAACTRTDATGPSEQQAPSFETQGSNN
Ga0307408_10004306353300031548RhizosphereMARSTTKWLAIASLTLATLTSAACTRSDATGPSEPITPAFENQGSNN
Ga0307408_10017079423300031548RhizosphereMSRTTTKWFVLASLALATLTSAACTRNDATGPSDQSAPSFDEGQGSNN
Ga0307469_1087815223300031720Hardwood Forest SoilMKGLAMSRTTTKWLVLASLALAGWTTTACTRSDATGPSDQPQPSFEGQGANN
Ga0307405_1184127023300031731RhizosphereVATDLKGNPMSRTTTKWFVLASLALATLTSAACTRNDATGPSDQSAPSFDEGQGSNN
Ga0307413_1004149523300031824RhizosphereMSRATTKWIMIASLILASATTACTRSDATGPSDQPAASFDEAQGSNN
Ga0307413_1025718823300031824RhizosphereAIASLTLATLTSAACTRSDATGPSEPVAPAFENQGSNN
Ga0307410_1001922143300031852RhizosphereMSRKTTKWVAIVSLTLATVTSTACTRTDATGPSEPVAPAFENQGSNN
Ga0307407_1139479923300031903RhizosphereMSRATTKWIMIASLILASATTACTRSDATGPSDQPAASFDEAQGANN
Ga0307407_1146064323300031903RhizospherePGRQLKGNPMSRKTTKWVAIVSLTLATVTSTACTRTDATGPSEPVAPAFENQGSNN
Ga0308175_10000918983300031938SoilMSRITTKWLVLASLTIAGLTSAACTRSDATGPSDQPKPSFEGQGSYN
Ga0308175_10063453123300031938SoilMSRTTTKWILLASLTIAGITSAACTRNDAMGPSDQTAPAFENQGSNN
Ga0308174_1197538023300031939SoilMSRTTTRWILLASLTIAGITSAACTRNDAMGPSDQTAPAFENQGSNN
Ga0326597_10004202183300031965SoilMSRTTTRWFAIALLALGAITSAACTRTDSTGPSDQPTASFESQGGNN
Ga0326597_1026736323300031965SoilMTRSTTKWLVLASLALAGMTSAACTRSDTTGPSEQPAPSFEGQGSGN
Ga0307416_10039496823300032002RhizosphereMARSTTKWLAIASLTLATLTSAACTRNDATGPSEPITPAFENQGSNN
Ga0310810_10014411103300033412SoilMSRITTKWLVLASLTLAGLTTSACTRNDATGPSDQPKPSFEGQGSNT
Ga0247830_1025179123300033551SoilMSRMTTQWLAIASLTLATLTSAACTRSDTTGPSDPITPAFESQGSGN
Ga0373902_025939_192_3353300034099Sediment SlurryMPRLTTKWLAIASLTLAAAATTACTRSDATGPSDQPAPAFENQGSNN
Ga0370548_125214_1_1383300034644SoilRSTTKWLVIVSLAAATLTSAACTRTDATGPSEQQAPSFETQGSNN


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