Metagenome / Metatranscriptome Family F039355

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039355
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	73 residues
Representative Sequence	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQD
Number of Associated Samples	131
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.66 %
% of genes near scaffold ends (potentially truncated)	73.17 %
% of genes from short scaffolds (< 2000 bps)	92.07 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.024 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.902 % of family members)
Environment Ontology (ENVO)	Unclassified (31.098 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.415 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF00264	Tyrosinase	23.17
PF03928	HbpS-like	6.10
PF03061	4HBT	4.27
PF10518	TAT_signal	1.83
PF03401	TctC	1.22
PF00313	CSD	1.22
PF07690	MFS_1	1.22
PF04392	ABC_sub_bind	1.22
PF01872	RibD_C	1.22
PF00589	Phage_integrase	1.22
PF00805	Pentapeptide	0.61
PF00027	cNMP_binding	0.61
PF03330	DPBB_1	0.61
PF01266	DAO	0.61
PF09335	SNARE_assoc	0.61
PF08327	AHSA1	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.22
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.22
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.22
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.22
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.61
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.61
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.61
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.63 %
Unclassified	root	N/A	10.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.63 %
Unclassified	root	N/A	10.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.02 %
Unclassified	root	N/A	10.37 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.05 %
Unclassified	root	N/A	10.37 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.32 %
Unclassified	root	N/A	10.37 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.49 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.88 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.61 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.66 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.61 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Pseudooceanicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola	0.61 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Malpighiales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Euphorbiaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Acalyphoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Acalypheae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae → Acalypheae	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Ricinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae → Acalypheae → Ricinus	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Ricinus communis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae → Acalypheae → Ricinus → Ricinus communis	0.61 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17193175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	1095	Open in IMG/M
3300000559\|F14TC_100760299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1055201	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10011824	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10098458	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300000955\|JGI1027J12803_100094547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300001661\|JGI12053J15887_10242803	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300002906\|JGI25614J43888_10028546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1766	Open in IMG/M
3300002910\|JGI25615J43890_1067427	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300002914\|JGI25617J43924_10095493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067	Open in IMG/M
3300004157\|Ga0062590_101319264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300004629\|Ga0008092_11237879	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300005172\|Ga0066683_10269827	All Organisms → cellular organisms → Bacteria → Proteobacteria	1056	Open in IMG/M
3300005186\|Ga0066676_10673149	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005187\|Ga0066675_11149834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005332\|Ga0066388_101248558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1275	Open in IMG/M
3300005332\|Ga0066388_101905502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1061	Open in IMG/M
3300005332\|Ga0066388_103730778	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300005332\|Ga0066388_103831225	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005332\|Ga0066388_104787526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300005332\|Ga0066388_104789725	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005332\|Ga0066388_107242240	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300005332\|Ga0066388_107976442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300005347\|Ga0070668_101231823	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300005435\|Ga0070714_102108227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300005437\|Ga0070710_10067223	Not Available	2056	Open in IMG/M
3300005439\|Ga0070711_100016943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4633	Open in IMG/M
3300005439\|Ga0070711_101881564	Not Available	526	Open in IMG/M
3300005445\|Ga0070708_101291651	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005451\|Ga0066681_10465632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300005467\|Ga0070706_101885211	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300005471\|Ga0070698_101360546	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005552\|Ga0066701_10404524	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300005557\|Ga0066704_10025443	All Organisms → cellular organisms → Bacteria → Proteobacteria	3551	Open in IMG/M
3300005561\|Ga0066699_10985371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300005568\|Ga0066703_10239707	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300005575\|Ga0066702_10984938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300005587\|Ga0066654_10754291	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300005713\|Ga0066905_100161081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1630	Open in IMG/M
3300005713\|Ga0066905_101247054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300005764\|Ga0066903_101884955	Not Available	1145	Open in IMG/M
3300005764\|Ga0066903_101999252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1113	Open in IMG/M
3300005764\|Ga0066903_103866309	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300005764\|Ga0066903_104384370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300005764\|Ga0066903_107722453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300005764\|Ga0066903_108357671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300006031\|Ga0066651_10076003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1639	Open in IMG/M
3300006046\|Ga0066652_100477421	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300006049\|Ga0075417_10203460	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300006050\|Ga0075028_100434994	Not Available	756	Open in IMG/M
3300006163\|Ga0070715_10983069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300006604\|Ga0074060_10013758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300006880\|Ga0075429_101863027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300006904\|Ga0075424_102276287	Not Available	570	Open in IMG/M
3300006914\|Ga0075436_101155366	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300009012\|Ga0066710_100634964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1623	Open in IMG/M
3300010043\|Ga0126380_10338619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1089	Open in IMG/M
3300010043\|Ga0126380_10887111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300010046\|Ga0126384_10618811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300010046\|Ga0126384_11651131	Not Available	605	Open in IMG/M
3300010047\|Ga0126382_10247231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1304	Open in IMG/M
3300010047\|Ga0126382_10833503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300010301\|Ga0134070_10046326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1461	Open in IMG/M
3300010326\|Ga0134065_10413065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300010333\|Ga0134080_10297862	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300010337\|Ga0134062_10216032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880	Open in IMG/M
3300010359\|Ga0126376_10109392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2128	Open in IMG/M
3300010360\|Ga0126372_10560329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300010366\|Ga0126379_11197294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300010398\|Ga0126383_10164957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2085	Open in IMG/M
3300010398\|Ga0126383_10551508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1218	Open in IMG/M
3300010398\|Ga0126383_10918041	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300010398\|Ga0126383_11181266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300010398\|Ga0126383_12197126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300010399\|Ga0134127_11732569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300010400\|Ga0134122_10755507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M
3300010868\|Ga0124844_1047403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1491	Open in IMG/M
3300010868\|Ga0124844_1069768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300012022\|Ga0120191_10007691	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300012208\|Ga0137376_10046744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3522	Open in IMG/M
3300012285\|Ga0137370_10408434	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300012354\|Ga0137366_10550659	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300012357\|Ga0137384_10889969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300012359\|Ga0137385_11447654	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300012360\|Ga0137375_10159941	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Euphorbiaceae → Acalyphoideae → Acalypheae → Ricinus → Ricinus communis	2187	Open in IMG/M
3300012922\|Ga0137394_10901559	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300012930\|Ga0137407_10143171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2104	Open in IMG/M
3300012957\|Ga0164303_10504135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300012958\|Ga0164299_10226296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1101	Open in IMG/M
3300012960\|Ga0164301_10381466	Not Available	980	Open in IMG/M
3300012961\|Ga0164302_10327678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300012961\|Ga0164302_10520569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	844	Open in IMG/M
3300012961\|Ga0164302_10680775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300012971\|Ga0126369_13109911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300012984\|Ga0164309_10087053	Not Available	1933	Open in IMG/M
3300012985\|Ga0164308_10406345	Not Available	1115	Open in IMG/M
3300012989\|Ga0164305_10220227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1349	Open in IMG/M
3300012989\|Ga0164305_10516851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300012989\|Ga0164305_11495020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300015372\|Ga0132256_102279408	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300016371\|Ga0182034_11952601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300016387\|Ga0182040_10105758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1920	Open in IMG/M
3300016445\|Ga0182038_11734019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300018482\|Ga0066669_10553822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300020579\|Ga0210407_10225532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1458	Open in IMG/M
3300020581\|Ga0210399_10982470	Not Available	681	Open in IMG/M
3300021168\|Ga0210406_10018409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6567	Open in IMG/M
3300021377\|Ga0213874_10267970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300021405\|Ga0210387_10606875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300021444\|Ga0213878_10107791	Not Available	1134	Open in IMG/M
3300021478\|Ga0210402_11063656	Not Available	736	Open in IMG/M
3300021559\|Ga0210409_11251131	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300025910\|Ga0207684_10259849	All Organisms → cellular organisms → Bacteria → Proteobacteria	1498	Open in IMG/M
3300025915\|Ga0207693_10155027	Not Available	1801	Open in IMG/M
3300025915\|Ga0207693_10785999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300025916\|Ga0207663_11118879	Not Available	633	Open in IMG/M
3300025928\|Ga0207700_11693644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300026498\|Ga0257156_1114991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300026547\|Ga0209156_10457572	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300026557\|Ga0179587_10520338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300026557\|Ga0179587_10746215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300026899\|Ga0209326_1019184	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300027071\|Ga0209214_1035257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300027576\|Ga0209003_1029382	All Organisms → cellular organisms → Bacteria → Proteobacteria	927	Open in IMG/M
3300027655\|Ga0209388_1192212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300027874\|Ga0209465_10388856	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300027909\|Ga0209382_10592040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1209	Open in IMG/M
3300028710\|Ga0307322_10147357	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300028819\|Ga0307296_10472131	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300028824\|Ga0307310_10074652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1464	Open in IMG/M
3300028878\|Ga0307278_10133124	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300029636\|Ga0222749_10293166	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300031544\|Ga0318534_10456104	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300031545\|Ga0318541_10069558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1843	Open in IMG/M
3300031679\|Ga0318561_10241752	All Organisms → cellular organisms → Bacteria → Proteobacteria	983	Open in IMG/M
3300031713\|Ga0318496_10279384	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300031720\|Ga0307469_11157712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300031724\|Ga0318500_10326802	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300031744\|Ga0306918_10468767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300031747\|Ga0318502_10409902	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300031763\|Ga0318537_10221993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300031763\|Ga0318537_10352858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300031765\|Ga0318554_10689068	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031778\|Ga0318498_10102074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1300	Open in IMG/M
3300031782\|Ga0318552_10093146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1480	Open in IMG/M
3300031782\|Ga0318552_10316573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300031794\|Ga0318503_10115893	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300031796\|Ga0318576_10190731	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300031831\|Ga0318564_10056568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1713	Open in IMG/M
3300031831\|Ga0318564_10525208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300031833\|Ga0310917_10172020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1439	Open in IMG/M
3300031846\|Ga0318512_10008929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3785	Open in IMG/M
3300031890\|Ga0306925_10264567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1853	Open in IMG/M
3300031894\|Ga0318522_10025274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1966	Open in IMG/M
3300031910\|Ga0306923_10099017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3289	Open in IMG/M
3300031945\|Ga0310913_11263211	Not Available	513	Open in IMG/M
3300032041\|Ga0318549_10375916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300032064\|Ga0318510_10153818	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300032068\|Ga0318553_10248598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	929	Open in IMG/M
3300032076\|Ga0306924_11587072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300032174\|Ga0307470_10278830	Not Available	1121	Open in IMG/M
3300032180\|Ga0307471_102772533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300032261\|Ga0306920_103069613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.12%
Host-Associated	Host-Associated	4.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.51%
Plants	Host-Associated → Plants	4.88%
Aquatic	Environmental → Aquatic	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.27%
Sediment	Environmental → Aquatic → Sediment	0.61%
Roots	Host-Associated → Plants → Roots	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.34%
Loam	Environmental → Terrestrial → Soil → Loam	23.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.61%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.61%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.61%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.61%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03724760	2088090014	Soil	IPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATAPQTGVSRERKR
F14TC_1007602992	3300000559	Soil	MIPLAVPIAFAVLALVAWRYDARVRRAYEATLSASDKRXFRALRRIHPSRWRAVMALKHAEAAVAASQEAGSRKPEKTSQR
AF_2010_repII_A01DRAFT_10552011	3300000580	Forest Soil	MIPLAVPVAFAVLALFAWRYDTRARRAYEATLSGAEKRQFRALRRVHPSKWRAAIALNR
AF_2010_repII_A1DRAFT_100118241	3300000597	Forest Soil	MIPLALPIAFAVLALAAWRYDARARRAYEATLSPAEKRQFRALRRVHPSRWRGAIALNEA
AF_2010_repII_A1DRAFT_100984581	3300000597	Forest Soil	MIPLALPIAFAVLALFAWRYDARARRAYEATLSPAEKRQFRALRRVHPSKWRGTIALNEAETSVTAVQNPGSRQPKKKSQK
JGI1027J12803_1000945471	3300000955	Soil	MIPLAVPIAFAVLALVAWGYDARARRAYEATLSAAEKRQFRALRRVHPARWRGLMALKDAETAVAASPDRELQVAKRTTRS
JGI12053J15887_102428031	3300001661	Forest Soil	MIPLAVPIVYAVLALVAWRYEARGRRAYEATLSAEEKRQFRALRRIDPLKWRAVIALRQAEAAASRGR
JGI25614J43888_100285461	3300002906	Grasslands Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKXAEATAT
JGI25615J43890_10674272	3300002910	Grasslands Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKHAEATAT
JGI25617J43924_100954931	3300002914	Grasslands Soil	MIPLAVPIVFAVVALVAWRYEARARRAYEATLSEAEKRQFRALRRVHPSKWRAAIALKQAEAAVAASQDVES
Ga0062590_1013192641	3300004157	Soil	MIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAERRQFRALRRVNPSKWRAAIALKQAGIAATAPQTGVSRERKR*
Ga0008092_112378792	3300004629	Tropical Rainforest Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAGPRR
Ga0066683_102698271	3300005172	Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAGRASRE
Ga0066676_106731491	3300005186	Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDA
Ga0066675_111498342	3300005187	Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSAAQQAENGRKTPA*
Ga0066388_1012485582	3300005332	Tropical Forest Soil	MVPFVPIAFAVLAILAWRYDARERRAYEAALSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTAQQAESGRKTPA*
Ga0066388_1019055022	3300005332	Tropical Forest Soil	MVPIVPIAFAVLAILAWRYDARERRAYEATLSEGEKRQFRALRRVHPAKWRAAIALKQAETKSAAQQAENGRKTPA*
Ga0066388_1037307781	3300005332	Tropical Forest Soil	WHMIPFVPIAFAVLALLAWRYDARERRAYEAMLSEAEKRQFRALRRVHPAKWRAAIALKQAETKSTAQQVENGRKTPA*
Ga0066388_1038312251	3300005332	Tropical Forest Soil	MIPFVPIAFAVLALLAWRYDARERRAHEATLSEAEKRQLRALRRVHPAKWRAAIALNQAEVNPPPNKPRTAARRPRDTLGGQRALVDEGGAK*
Ga0066388_1047875261	3300005332	Tropical Forest Soil	VIPFVPIAFAVPALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSAAQQAENGRKTPA*
Ga0066388_1047897252	3300005332	Tropical Forest Soil	MRLRPDLCYPAGMIPLAVPVAFAVLALFAWCYDTRARRAYEATLSGAEKRQFRALRRVHPSKWRAAIALN
Ga0066388_1072422402	3300005332	Tropical Forest Soil	MIPLVVPIAFAVLALFAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAETAATAAQ
Ga0066388_1079764422	3300005332	Tropical Forest Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQA
Ga0070668_1012318232	3300005347	Switchgrass Rhizosphere	MIPFVPIAFAVLALFAWRYDTRARRAYEATLSGAEKRQFRALRRVHPSQWRATIALKHAETGIASTQD
Ga0070714_1021082271	3300005435	Agricultural Soil	MIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAEIALKQAGIAAASQ
Ga0070710_100672232	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTPA*
Ga0070711_1000169432	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQSGIAATASQAGVLRERKR*
Ga0070711_1018815641	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ERARRAYEATLSEAEKRQFRALRRVDPSKWRAAIALKQAGIAATAPQTGASRERKR*
Ga0070708_1012916512	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIPLAVPIAFAVLALVAWGYDARARRAYEATLSAAEKRQFRALRRVHPSRSRAIIALKEAETAV
Ga0066681_104656322	3300005451	Soil	LAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSAAQQAENGRKTPA*
Ga0070706_1018852112	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVPFVPIAFAVLALLAWRYDLRARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAE
Ga0070698_1013605462	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATAT
Ga0066701_104045241	3300005552	Soil	MIPLAVPIAFAVLALVAWRYDARVRRAYEATLSAPDKRQFRALRRIHPSRWRAVMALKHAEAAVAAAQEAG
Ga0066704_100254434	3300005557	Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATA
Ga0066699_109853712	3300005561	Soil	MIPLAVPIAFAVLALVAWRYEARAQRAYEATLSAAEKRQFRALRRIHPLRWRAAIALKQAEAAV
Ga0066703_102397071	3300005568	Soil	MIPLAVPIAFAVLALVAWGYEARARRAYEATLSAAEKRQFRALRRVHPSRSRAIIALKEAET
Ga0066702_109849382	3300005575	Soil	MIPLAVPVAFAVLALFAWRYDTRARRAYEATLSGAEKRQFRALRRVHPSQWRATIALNHAETGIAAAQEVE
Ga0066654_107542912	3300005587	Soil	MIPLAVPIAFAVLALVAWGYEARARRAYEATLSAAEKRQFRALRRVNPSRSRAIVALKEAETAVAASPDLELQAAK
Ga0066905_1001610811	3300005713	Tropical Forest Soil	MIPLAVPIAFAVLALVAWGYDARARRAYEATLSAAEKRQFRALRRVHPARWRGLMALKDAETAVAASPDRELQ
Ga0066905_1012470541	3300005713	Tropical Forest Soil	MIPLALPIAFAVLALVAWRYDARARRAYEATLSPAEKRQFRALRRVHPSRWRGAIALNEAETTVTAVQNSEPRQPKKEKPGAHAALRKAK*
Ga0066903_1015639393	3300005764	Tropical Forest Soil	LHLPCWRFSLGANDTRERRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEIKSTAQQAENGGKTPA*
Ga0066903_1018849553	3300005764	Tropical Forest Soil	MIPLAVPIGFAAFALVAWRYESRARRAYVATLSAEEKRQLRALRRIDPLKWRAVIALRQAEAAVAASQG
Ga0066903_1019992522	3300005764	Tropical Forest Soil	MGWFFGVCTAVPTVSYNRQDIVIDWHMIPIVPIAFAVLAFLAWRYDASERRAYEATLSKAEKRQFRALRRVHPAKWRAAIALKQAETKSAGQQAETGRKTPA*
Ga0066903_1038663091	3300005764	Tropical Forest Soil	MLPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATA
Ga0066903_1043843702	3300005764	Tropical Forest Soil	MVPFVPIAFAVLAILAWRYDARERRAYEAILSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTVQRAESCRKTPA*
Ga0066903_1077224531	3300005764	Tropical Forest Soil	FAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTAQQAESGRKTPA*
Ga0066903_1083576711	3300005764	Tropical Forest Soil	VLALLAWRYDARERRAYEATLNEEEKRQLRALRRVHPAKWRAAIALKQAETLGTAAQDAAGRPRKIRSKSTVHTGRNTPA
Ga0066651_100760031	3300006031	Soil	LTTPLALLAWRYDARERRAYEATLSEAAKRQFRALRRIHPAKWRAAIALKQAETNPPPPKAENGRKTPA*
Ga0066652_1004774212	3300006046	Soil	MIPLAVPIAFAVLALVAWRYDARVRRAYEATLSAPDKRQFRALRRIHPSRWRAVMALKHAEAAVAAAQEAGSRKPEKT
Ga0075417_102034602	3300006049	Populus Rhizosphere	MIPLAVPIAFAVLALVAWQYDARVRRAYEATLSAADKRQFRALRRIHPSRWRAVMALKHAEAAVAASQE
Ga0075028_1004349941	3300006050	Watersheds	TYEHMIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATASQAGVSRERKR*
Ga0070715_109830693	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTP
Ga0074060_100137581	3300006604	Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAA
Ga0075429_1018630271	3300006880	Populus Rhizosphere	MIPLAVPIAFAVLALVAWQYDARVRRAYEATLSAADKRQFRALRRIHPSRWRAVMALKHAEAAVAASQEAGSRKPEKTS
Ga0075424_1022762871	3300006904	Populus Rhizosphere	AVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATASRTGVSRERKR*
Ga0075436_1011553662	3300006914	Populus Rhizosphere	MIPLAIPVAFAVLALFAWRYDRRARRAYEATLSGAEKRQFRALRRVHPSQWRAAIALNHA
Ga0066710_1006349642	3300009012	Grasslands Soil	MVPFVPIAFAVLALLAWRYEARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQHAVPRRPKRS
Ga0126380_103386191	3300010043	Tropical Forest Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKLQFRALRRVHPAKWRAAIALKQAETLATAAQDAVPRPRKIRRQPE*
Ga0126380_108871111	3300010043	Tropical Forest Soil	MIPLAVPIAFAVLALVAWGYDARARRAYEATLSAAEKRQFRALRRVHPARWRGLMALKDAETAVAASPDRELQAAKRMPRSRN
Ga0126384_106188112	3300010046	Tropical Forest Soil	MIPIVPIAFAVLALLAWRHDTRERRAYEATLSEAEKRQLRALRRVHPAKWRAVVALKQAETLATAAQDAAPRPRKKRRKSTAQQAESGRKTPA*
Ga0126384_116511311	3300010046	Tropical Forest Soil	MIPLAVPIGFAAFALVAWRYESRARRAYVATLSAEEKRQLRALRRIDPLKWRAVIALRQAEAAVA
Ga0126382_102472313	3300010047	Tropical Forest Soil	MVPFVPIAFAVLALLAWRHDARARRAYEATLSEAEKLQFRALRRVHPAKWRAAIALKQAETLATAAQDAAPRPRKIRRQPE*
Ga0126382_108335031	3300010047	Tropical Forest Soil	MIPLALPIAFAVLALAAWRYDARARRAYEATLSPAEKRQFRALRRVHPSRWRGAIALNEAETTVTAVQNSEPRQPKKKSQK
Ga0134070_100463261	3300010301	Grasslands Soil	MIPLAVPIAFAVLALVAWGYEARARRAYEATLSAAEKRQFRALRRVNPSRSRAIVALKEAETAVAASPDL
Ga0134065_104130652	3300010326	Grasslands Soil	MIPLAVPVAFAVLALFAWRYDTRARRAYEATLSGAEKRQFRALRRVHPSQWRATIALNHAETGIAAAQEVETRA
Ga0134080_102978621	3300010333	Grasslands Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAGR
Ga0134062_102160322	3300010337	Grasslands Soil	MVPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETNPAQQAENGRKTPA*
Ga0126376_101093923	3300010359	Tropical Forest Soil	MIPLVVPIAFAVLALFAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAETAATAAQDAG
Ga0126372_105603292	3300010360	Tropical Forest Soil	MVPFVPIAFAVLALLPWRYDARARRAYEATLSEAEKLQFRALRRVHPAKWRAAIALKQAETLATAAQDAVPRPRKIRRQPE*
Ga0126379_111972942	3300010366	Tropical Forest Soil	MIPIVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQLRALRRVHPAKWRAVVAVKLAETLATAAQDAAPRPRKKRRKSTAQQAENGPKTPA*
Ga0126383_101649573	3300010398	Tropical Forest Soil	MIPLVVPIAFAVLALFAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAETAATAAQD
Ga0126383_105515083	3300010398	Tropical Forest Soil	MIPLAVPVAFAVLALFAWRYDTRARRAYEATLSGAEKRQFRALRRVHPSQWRAAIALNHAETGIAAAQEA
Ga0126383_109180412	3300010398	Tropical Forest Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEILQFRALRRVHPSKWRAAIALKQAEATATAAQH
Ga0126383_111812663	3300010398	Tropical Forest Soil	PFVPIAFAVLALLAWRYDARARRAYEATLSEAEKLQFRALPRVHPAKWRAAIALKQAETLATAAQDAVPRPRKIRRQPE*
Ga0126383_121971262	3300010398	Tropical Forest Soil	MIPFVPIAFAVLALLAWRWDARERRAYEATLSEAEKRQLRALRRVHPAKWRAVVALKQAETLATAAQDAAPRPRKKRRKSTAQQAESGRKTPERPGNRERGVPIGSPSPGR*
Ga0134127_117325692	3300010399	Terrestrial Soil	MIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQSGIAATAS
Ga0134122_107555071	3300010400	Terrestrial Soil	MIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIA
Ga0124844_10474031	3300010868	Tropical Forest Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKLQFRALPRVHPAKWRAAIALKQAETLATAAQDAVPRPRKIRRQPE*
Ga0124844_10697683	3300010868	Tropical Forest Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKLQFRVLRRVHPAKWRAAIALKQAETLATAAQDAVPRPRKIRRQPE*
Ga0120191_100076912	3300012022	Terrestrial	MIPLAVPIAFAVLALVAWRYDARVRRAYEATLSASDKRQFRALRRIHPSRWRAVMALKHAEAAVEHAAGGHRIDVRAHHH
Ga0137376_100467441	3300012208	Vadose Zone Soil	MIPLVPIAFAVLALLAWRYEARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQHAAPRRPKR*
Ga0137370_104084341	3300012285	Vadose Zone Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAETKSAAQQAENGRKTPA*
Ga0137366_105506592	3300012354	Vadose Zone Soil	MIPLAVPIAFAVLALVAWRYDARVRRAYEATLSASDRRQFRALRRIHPSRWRAVMALKHAEAAVAAAQEA
Ga0137384_108899692	3300012357	Vadose Zone Soil	MIPLVVPIAFAVLALVAWRYEARARRAYEATLSAAEKRQFRALRRIHPLKWRAAIALKQAEAAVTASQDVESREPK
Ga0137385_114476542	3300012359	Vadose Zone Soil	MIPLAVPIAFAVLALVAWRYDARVRRAYEATLSASDKRQFRALRRIHPSRWRAVMAL
Ga0137375_101599413	3300012360	Vadose Zone Soil	MIPLVVPIAFAVLALFAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEAAATTAQDAGPRRPKKRG
Ga0137394_109015591	3300012922	Vadose Zone Soil	MIPFAVPIAFAVLALVAWRYDARARRAYEATLSEAEKRQFRALRRVHPSKWRAAIALKQAEAAAAASQDVEP
Ga0137407_101431713	3300012930	Vadose Zone Soil	MIPLVVPIAFAVLALFAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEAAATA
Ga0164303_105041352	3300012957	Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAQKRQFRALRRVHPAKWRAAIALKQSEATAAQDAAPRPRKTRPKSTAQQADNGRKAPA*
Ga0164299_102262962	3300012958	Soil	MIPFVPIAFAVVALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALNQSEIKSTANKPRTGARRPRDAR*
Ga0164301_103814663	3300012960	Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALNQSEIKSTANKPRTAARRPPDAR*
Ga0164302_103276782	3300012961	Soil	LIARTRERRVIPLAVPIAFAVLALIAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAETKSAGQQAETGRKTLA*
Ga0164302_105205692	3300012961	Soil	MIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATASQTGVSRERKR*
Ga0164302_106807752	3300012961	Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALNQSEIKSTANKPRTGARRPRDAR*
Ga0126369_131099112	3300012971	Tropical Forest Soil	MVPLVPIAFAVLALLAWRYDARERRAYEAMLSEAEKRQFRALRRVHPAKWRAAIALKQAETKSAAQQAENGRKTPA*
Ga0164309_100870533	3300012984	Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKPAETKSAAQQAENGRKTPA*
Ga0164308_104063452	3300012985	Soil	RCLHGSSDSVIALHMIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTPA*
Ga0164305_102202272	3300012989	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQA
Ga0164305_105168513	3300012989	Soil	AWHMIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALNQSEIKSTANKPRTGARRPRDAR*
Ga0164305_114950202	3300012989	Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLNEAEKRQLRALRRVHPAKWRAAIALKQAETLATAAQD
Ga0132256_1022794081	3300015372	Arabidopsis Rhizosphere	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATGAQ
Ga0182034_119526011	3300016371	Soil	MIPFVPIAFAVLAFLAWRYDARARRAYEATLSEAEKRQFRALRRVHPSKWRAAIALKQAETAAAQE
Ga0182040_101057581	3300016387	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAE
Ga0182038_117340193	3300016445	Soil	MIPFVPIAFAVLAFLAWRYDARARRAYEATLSEAEKRQFRALRRVHPSKWRAAIALKQAETAAAQELAPRQPRRI
Ga0066669_105538221	3300018482	Grasslands Soil	AFAVLALVAWQYDARARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATGSQAGVSREGKR
Ga0210407_102255321	3300020579	Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQSEATAAQDAAPRPRKTRPKSTAQQADNGRKAPA
Ga0210399_109824702	3300020581	Soil	PLAVPIAFAVLALVAWRYDELARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATAPQTGVLRERKR
Ga0210406_100184099	3300021168	Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTPA
Ga0213874_102679701	3300021377	Plant Roots	MIPFVPIAFAVLALLAWRYDARERRAHEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTPA
Ga0210387_106068752	3300021405	Soil	TAVPTVCVLHRRDSVIAWHMIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQSEATAAQDAAPRPRKTRPKSTAQQADNGRKAPA
Ga0213878_101077912	3300021444	Bulk Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQD
Ga0210402_110636561	3300021478	Soil	DSVIALHMIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTPA
Ga0210409_112511311	3300021559	Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQA
Ga0207684_102598491	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAETTATAAQYAAPRAPKR
Ga0207693_101550271	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTP
Ga0207693_107859991	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATAPQTGVLRERKR
Ga0207663_111188791	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	IAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTPA
Ga0207700_116936441	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIPLAVPIAFAVLALVAWRYEARARRAYEATLSAAEKRQFRALRRIHPLKWRAAIALKQAEAAVTASQ
Ga0257156_11149911	3300026498	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAGATATA
Ga0209156_104575722	3300026547	Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSA
Ga0179587_105203382	3300026557	Vadose Zone Soil	MIPLAVPIAFAVLALVAWRYDERARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATASQAGV
Ga0179587_107462151	3300026557	Vadose Zone Soil	MALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKHAEATATAAQDAGP
Ga0209326_10191841	3300026899	Forest Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAE
Ga0209214_10352571	3300027071	Forest Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAGPPR
Ga0209003_10293821	3300027576	Forest Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATGAQ
Ga0209388_11922121	3300027655	Vadose Zone Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKHAEATATAAQDAGPRQPG
Ga0209465_103888561	3300027874	Tropical Forest Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAA
Ga0209382_105920403	3300027909	Populus Rhizosphere	MIPFVPIAFAVLALFAWRYDTRARRAYEATLSGAEKRQFRALRRVHPSQWRAAIALNHAEQE
Ga0307322_101473572	3300028710	Soil	MIPFAAPIALAVFAVLAWRYETRTWRAYEATLSPAEKRQFRAFRRTHPSKWRAFIALQQA
Ga0307296_104721312	3300028819	Soil	MIPFVPIAFAVLALFAWRYDTRAQRAYEATLSGAEKRQFRALRRVHPSQWRATIALKHAEKGI
Ga0307310_100746523	3300028824	Soil	MIPFAAPIALAVFAVLAWRYETRTWRAYEATLSPAEKRQFRAFRRTHPSKWRAFIALQQAERVARTRP
Ga0307278_101331241	3300028878	Soil	MIPFAVPIAFAVLALVAWRYDARARRAYEATLSEAEKRQFRALRRVHPSKWRAAIALKQAEAAAAASQDVEPRAPKR
Ga0222749_102931662	3300029636	Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQA
Ga0318534_104561041	3300031544	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAGPRQP
Ga0318541_100695582	3300031545	Soil	MIPLAVPIAFAVLALVAWRYDARARRAYEATLSAAEKRQFRALRRVHPLRWRAIIVLKQAEAAVTAAQDVESREPKKVSQRRAG
Ga0318561_102417522	3300031679	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAVQD
Ga0318496_102793842	3300031713	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAAPRQ
Ga0307469_111577122	3300031720	Hardwood Forest Soil	MIPFVPIAFAVLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALNQSEIKSTANKPRTGARRPRDAR
Ga0318500_103268021	3300031724	Soil	MIPLVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAARER
Ga0306918_104687672	3300031744	Soil	MIPLAAPIAFAALALVACRYDARARRAYEATLSAAEKRELLALRRVDPLRWRAIIALKQAEAAVMASQDVESRGSNI
Ga0318502_104099021	3300031747	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATAMAA
Ga0318537_102219933	3300031763	Soil	VIAWDMIPFVPIAFAVLALLAWRWDARERRAYEATLSEAEKRQLRALRRVHPAKWRVAIALGQAETLATAAQDAAPRPR
Ga0318537_103528581	3300031763	Soil	MIPLAAPIAFAALALVAWRYDARARRAYEATLSAAEKRELLALRRVDPLRWRAIIALKQAEAAVMASQDVESRGSNI
Ga0318554_106890681	3300031765	Soil	MIPLALPIAFAVLALAAWRYDARARRAYEATLSPAEKRQFRALRRVHPSRWRGAIALNEAETTVTAVQN
Ga0318498_101020742	3300031778	Soil	MIPLVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAGPRRPKGSN
Ga0318552_100931461	3300031782	Soil	MIPLVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAGPRRPK
Ga0318552_103165731	3300031782	Soil	IPLAVPIAFAVLALVAWRYDARARRAYEATLSAAEKRQFRALRRVHPLRWRAIIVLKQAEAAVTAAQDVESREPKKVSQRRAG
Ga0318503_101158932	3300031794	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAA
Ga0318576_101907312	3300031796	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQ
Ga0318564_100565681	3300031831	Soil	MIPLVVPIAFAVLALVAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIAL
Ga0318564_105252082	3300031831	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVNPAKWRAAIALKQAEATATAAQDAGPRQPGRI
Ga0310917_101720204	3300031833	Soil	MIPFVPIAFAVLALLAWRWDARERRAYEATLSEAEKRQLRALRRVHPAKWRVAIALGQAETLATAAQDAAPR
Ga0318512_100089295	3300031846	Soil	MIPLVVPIAFAVLALVAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAETAATAARAHHI
Ga0306925_102645671	3300031890	Soil	VIAWHMIPFVPIAFAVLALLAWRWDARERRAYEATLSEAEKRQLRALRRVHPAKWRAVVALKQAETLATAAQDAAPRPRKKRRKSTAQQAESGRKTPA
Ga0318522_100252742	3300031894	Soil	MIPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVHPAKWRAAIALKQAEATATAAQDAGPRRPK
Ga0306923_100990171	3300031910	Soil	MIPLALPIAFAVLALAAWRYDARARRAYEATLSPAEKRQFRALRRVHPSRWRGAIALNEAETTV
Ga0310913_112632111	3300031945	Soil	FAVLALLAWRYDARARRAYEATLSDAEKRQFRALRRVHPEKWRAAIALKQAETLATAAQDAAPRPRKIRRQPDELEE
Ga0318549_103759163	3300032041	Soil	MIPFVPIAFAVLALLAWRWDARERRAYEATLSEAEKRQLRALRRVHPAKWRVAIALGQAETLATAA
Ga0318510_101538181	3300032064	Soil	MVPFVPIAFAVLALLAWRYDARARRAYEATLSEAEKRQFRALRRVNPAKWRAAIALKQAEATATAAQDAGPRQ
Ga0318553_102485981	3300032068	Soil	MIPLAVPIAFAVLALVAWRYDARARRAYEATLSAAEKRQFRALRRVHPLRWRAIIVLKQA
Ga0306924_115870722	3300032076	Soil	MIPFVPIAFAVLALLAWRWDARERRAYEATLSEAEKRQLRALRRVHPAKWRAVVALKQAETLATAAQDAAPRP
Ga0307470_102788302	3300032174	Hardwood Forest Soil	VLALLAWRYDARERRAYEATLSEAEKRQFRALRRIHPAKWRAAIALKQAETKSTQQAENGRKTPA
Ga0307471_1027725331	3300032180	Hardwood Forest Soil	MIPLAVPTAIAVLALVAWRYDARARRAYEATLSEAEKRQFRALRRVNPSKWRAAIALKQAGIAATASQAGVLRERKR
Ga0306920_1030696133	3300032261	Soil	PIAFAVLALLAWRWDARERRAYEATLSEAEKRQLRALRRVHPAKWRAVVALKQAETLATAAQDAAPRPRKKRRKSTAQQAESGRKTPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039355

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences