Metagenome / Metatranscriptome Family F039318

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F039318
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	66 residues
Representative Sequence	MREERRLVWRVLRHWKEIADGGRFPRRDEIDPWLRGEDGANCLLIAVGWSIELSHLIVVGVNL
Number of Associated Samples	114
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.79 %
% of genes near scaffold ends (potentially truncated)	61.59 %
% of genes from short scaffolds (< 2000 bps)	58.54 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (75.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.585 % of family members)
Environment Ontology (ENVO)	Unclassified (33.537 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.829 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.07% β-sheet: 16.48% Coil/Unstructured: 49.45%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF13419	HAD_2	5.49
PF03746	LamB_YcsF	3.05
PF12804	NTP_transf_3	2.44
PF08327	AHSA1	1.22
PF00872	Transposase_mut	1.22
PF16861	Carbam_trans_C	1.22
PF08241	Methyltransf_11	1.22
PF09723	Zn-ribbon_8	0.61
PF00924	MS_channel	0.61
PF08352	oligo_HPY	0.61
PF14602	Hexapep_2	0.61
PF07769	PsiF_repeat	0.61
PF02543	Carbam_trans_N	0.61
PF01139	RtcB	0.61
PF01425	Amidase	0.61
PF00941	FAD_binding_5	0.61
PF00126	HTH_1	0.61
PF03466	LysR_substrate	0.61
PF02515	CoA_transf_3	0.61
PF01547	SBP_bac_1	0.61
PF03713	DUF305	0.61
PF04909	Amidohydro_2	0.61
PF08867	FRG	0.61
PF00180	Iso_dh	0.61
PF00589	Phage_integrase	0.61
PF00211	Guanylate_cyc	0.61
PF13701	DDE_Tnp_1_4	0.61
PF16576	HlyD_D23	0.61
PF05443	ROS_MUCR	0.61
PF05598	DUF772	0.61
PF04120	Iron_permease	0.61
PF13432	TPR_16	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG1540	5-oxoprolinase subunit A	Amino acid transport and metabolism [E]	3.05
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.22
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.61
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.61
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.61
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.61
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.61
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	0.61
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.61
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.61
COG4957	Predicted transcriptional regulator	Transcription [K]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
All Organisms	root	All Organisms	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
cellular organisms	root	All Organisms → cellular organisms	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.02 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.61 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.76 %
Candidatus Aenigmarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota	0.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.61 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.44 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	1.22 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.61 %
unclassified Aenigmarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota	0.61 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	1.22 %
Rhodovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.61 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.61 %
Desulfurellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales	0.61 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Micavibrio aeruginosavorus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus	1.22 %
unclassified Desulfurellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales	0.61 %
Erythrobacter/Porphyrobacter group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group	0.61 %
Rhodovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio	0.61 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Micavibrio aeruginosavorus ARL-13	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus → Micavibrio aeruginosavorus ARL-13	1.22 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.61 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	0.61 %
Rhodovibrio salinarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio salinarum	0.61 %
Erythrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Micavibrio aeruginosavorus ARL-13	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus → Micavibrio aeruginosavorus ARL-13	1.22 %
unclassified Erythrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter	0.61 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.61 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	0.61 %
Rhodovibrio salinarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio salinarum	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Micavibrio aeruginosavorus ARL-13	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus → Micavibrio aeruginosavorus ARL-13	1.22 %
Erythrobacter sp. JL475	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp. JL475	0.61 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.61 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	0.61 %
Rhodovibrio salinarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio salinarum	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.61 %
Candidatus Aenigmarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	0.61 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18402IO10Q	Not Available	505	Open in IMG/M
3300002245\|JGIcombinedJ26739_101830296	Not Available	508	Open in IMG/M
3300002914\|JGI25617J43924_10326432	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005435\|Ga0070714_101736103	Not Available	609	Open in IMG/M
3300005435\|Ga0070714_102450028	Not Available	507	Open in IMG/M
3300005437\|Ga0070710_10258968	Not Available	1121	Open in IMG/M
3300005439\|Ga0070711_100947701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio salinarum	736	Open in IMG/M
3300005439\|Ga0070711_101165482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Erythrobacter/Porphyrobacter group → Erythrobacter → unclassified Erythrobacter → Erythrobacter sp. JL475	666	Open in IMG/M
3300005471\|Ga0070698_100315694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1493	Open in IMG/M
3300005568\|Ga0066703_10462256	Not Available	759	Open in IMG/M
3300005764\|Ga0066903_105672671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	656	Open in IMG/M
3300006028\|Ga0070717_10342196	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300006172\|Ga0075018_10637529	Not Available	570	Open in IMG/M
3300006175\|Ga0070712_100534247	Not Available	986	Open in IMG/M
3300006175\|Ga0070712_101640167	Not Available	563	Open in IMG/M
3300006176\|Ga0070765_101284476	Not Available	690	Open in IMG/M
3300006755\|Ga0079222_10820989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300006852\|Ga0075433_11590644	Not Available	564	Open in IMG/M
3300006954\|Ga0079219_11221315	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300007255\|Ga0099791_10511389	Not Available	584	Open in IMG/M
3300009792\|Ga0126374_11314857	Not Available	585	Open in IMG/M
3300010048\|Ga0126373_10104722	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300010361\|Ga0126378_12396415	Not Available	603	Open in IMG/M
3300010366\|Ga0126379_11150626	Not Available	882	Open in IMG/M
3300010396\|Ga0134126_11959548	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300011270\|Ga0137391_10257180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1512	Open in IMG/M
3300012203\|Ga0137399_11713643	Not Available	517	Open in IMG/M
3300012582\|Ga0137358_10321623	Not Available	1049	Open in IMG/M
3300012582\|Ga0137358_10742492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300012971\|Ga0126369_10039219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3963	Open in IMG/M
3300012971\|Ga0126369_11865739	Not Available	690	Open in IMG/M
3300016270\|Ga0182036_10065416	All Organisms → cellular organisms → Bacteria	2348	Open in IMG/M
3300016294\|Ga0182041_10798763	Not Available	843	Open in IMG/M
3300016319\|Ga0182033_11899886	Not Available	541	Open in IMG/M
3300016319\|Ga0182033_12073539	Not Available	518	Open in IMG/M
3300018433\|Ga0066667_11476178	Not Available	600	Open in IMG/M
3300020579\|Ga0210407_10087234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2357	Open in IMG/M
3300020579\|Ga0210407_10703342	Not Available	783	Open in IMG/M
3300020580\|Ga0210403_10065056	All Organisms → cellular organisms → Bacteria	2925	Open in IMG/M
3300020580\|Ga0210403_10235318	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300020581\|Ga0210399_10246000	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300020582\|Ga0210395_10689141	Not Available	765	Open in IMG/M
3300020583\|Ga0210401_10465661	Not Available	1126	Open in IMG/M
3300021088\|Ga0210404_10162151	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300021168\|Ga0210406_10274441	Not Available	1377	Open in IMG/M
3300021170\|Ga0210400_10160906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	1812	Open in IMG/M
3300021170\|Ga0210400_10312222	Not Available	1291	Open in IMG/M
3300021170\|Ga0210400_11446761	Not Available	546	Open in IMG/M
3300021170\|Ga0210400_11451919	Not Available	545	Open in IMG/M
3300021178\|Ga0210408_11368291	Not Available	534	Open in IMG/M
3300021180\|Ga0210396_10204103	Not Available	1765	Open in IMG/M
3300021407\|Ga0210383_11001049	Not Available	709	Open in IMG/M
3300021420\|Ga0210394_10676492	Not Available	905	Open in IMG/M
3300021474\|Ga0210390_10137310	Not Available	2056	Open in IMG/M
3300021477\|Ga0210398_11326811	Not Available	565	Open in IMG/M
3300021478\|Ga0210402_10299481	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300021478\|Ga0210402_10848298	Not Available	839	Open in IMG/M
3300021559\|Ga0210409_10675327	Not Available	903	Open in IMG/M
3300022557\|Ga0212123_10371399	Not Available	970	Open in IMG/M
3300025905\|Ga0207685_10245090	Not Available	864	Open in IMG/M
3300025915\|Ga0207693_10451788	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon	1004	Open in IMG/M
3300025915\|Ga0207693_10573761	Not Available	879	Open in IMG/M
3300025916\|Ga0207663_10551773	Not Available	901	Open in IMG/M
3300025929\|Ga0207664_10662743	Not Available	938	Open in IMG/M
3300026312\|Ga0209153_1096851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300026355\|Ga0257149_1054622	Not Available	579	Open in IMG/M
3300027297\|Ga0208241_1080128	Not Available	524	Open in IMG/M
3300028906\|Ga0308309_10220462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1573	Open in IMG/M
3300029636\|Ga0222749_10119431	Not Available	1257	Open in IMG/M
3300031573\|Ga0310915_10748884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus → Micavibrio aeruginosavorus ARL-13	688	Open in IMG/M
3300031679\|Ga0318561_10143183	Not Available	1280	Open in IMG/M
3300031719\|Ga0306917_10587717	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300031720\|Ga0307469_11278915	Not Available	696	Open in IMG/M
3300031723\|Ga0318493_10554004	Not Available	638	Open in IMG/M
3300031753\|Ga0307477_10155613	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300031753\|Ga0307477_11148706	Not Available	505	Open in IMG/M
3300031754\|Ga0307475_10864171	Not Available	715	Open in IMG/M
3300031796\|Ga0318576_10252742	Not Available	831	Open in IMG/M
3300031820\|Ga0307473_10107046	Not Available	1504	Open in IMG/M
3300031821\|Ga0318567_10288281	Not Available	925	Open in IMG/M
3300031832\|Ga0318499_10113459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300031833\|Ga0310917_10418532	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300031879\|Ga0306919_10018232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4178	Open in IMG/M
3300031879\|Ga0306919_10067843	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300031879\|Ga0306919_10718479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio → Micavibrio aeruginosavorus → Micavibrio aeruginosavorus ARL-13	769	Open in IMG/M
3300031879\|Ga0306919_11280589	Not Available	555	Open in IMG/M
3300031890\|Ga0306925_10043702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4646	Open in IMG/M
3300031890\|Ga0306925_10066534	All Organisms → cellular organisms → Bacteria	3786	Open in IMG/M
3300031890\|Ga0306925_10914101	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300031897\|Ga0318520_10282898	Not Available	996	Open in IMG/M
3300031910\|Ga0306923_11536937	Not Available	695	Open in IMG/M
3300031910\|Ga0306923_11654478	Not Available	663	Open in IMG/M
3300031912\|Ga0306921_10457366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1487	Open in IMG/M
3300031912\|Ga0306921_11343653	Not Available	788	Open in IMG/M
3300031941\|Ga0310912_10737664	Not Available	762	Open in IMG/M
3300031941\|Ga0310912_10863023	Not Available	697	Open in IMG/M
3300031941\|Ga0310912_10964836	Not Available	654	Open in IMG/M
3300031962\|Ga0307479_11143800	Not Available	743	Open in IMG/M
3300031962\|Ga0307479_11596070	Not Available	608	Open in IMG/M
3300031962\|Ga0307479_11929684	Not Available	540	Open in IMG/M
3300031981\|Ga0318531_10359285	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300032041\|Ga0318549_10184508	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300032076\|Ga0306924_10983700	Not Available	927	Open in IMG/M
3300032090\|Ga0318518_10549897	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300032091\|Ga0318577_10112667	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300032094\|Ga0318540_10026523	All Organisms → cellular organisms → Bacteria	2470	Open in IMG/M
3300032261\|Ga0306920_102403238	Not Available	727	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.78%
Host-Associated	Host-Associated	1.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.95%
Aquatic	Environmental → Aquatic	1.83%
Plants	Host-Associated → Plants	1.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.95%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.22%
Sediment	Environmental → Aquatic → Sediment	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.61%
Loam	Environmental → Terrestrial → Soil → Loam	21.34%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.44%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.66%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.61%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_06707830	2124908009	Soil	MKEERRLAWRVLRHWTEIAQGGRLPRRDEIEGWMVGEDAANCVLIGVESPIELSYFVSVGLNLATALCSADTLAGSAFVANTTGGFGAPRIGG
JGIcombinedJ26739_1000924224	3300002245	Forest Soil	MEEERRLIYRVLRHWTEIARGGRLPRRDEINPYIRGDDAANCLLIAVRSPIERSHFV
JGIcombinedJ26739_1018302962	3300002245	Forest Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHFVEVGVNLAVALCPTDTLA
JGI25617J43924_103264321	3300002914	Grasslands Soil	MREERRLAWRVLRHWTEIAQGGRLPRRNEVERWMLGEDGANCVLIGVESPIELSYFLSVGVNLAVALCSA
Ga0066388_1010868832	3300005332	Tropical Forest Soil	MQEERRLVWRILRQWQEISAGGRFPRRDEIDPWLRGEDGKNCLLIAVESPIERGLRSL*
Ga0070714_1017361031	3300005435	Agricultural Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHFVEVGVNLAVALCPTD
Ga0070714_1024500281	3300005435	Agricultural Soil	MKEERRLVWRVLRRWTEISDGGRFPRRDQIDPWMRGEDGANTLLIAVESPMELSHFVVVGVNLAIALC
Ga0070713_1007619542	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKEERRLVWRVLRHWKEIADSGRFPRRDEIDAWMRGEDGANCLLIVVEWSIELS
Ga0070710_102589681	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRERRLVWRVLRHWREIANGGRFPCRDEIEPWMRGEDGVNCLLITVESPIELSHFLTVGMSLGIALCPTDTLAGVLLS
Ga0070710_111158821	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKEERRLVWRVLRNWTEIAHGGRFPRCEEIDPWMRGQDGPNCVLIAVEWS
Ga0070711_1009477011	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKEERRLVWRVLRNWTEIAHGGRFPRCEEIDRWMRGEDGANCVLIAVEWSIELSHFVVVGVNLAVALC
Ga0070711_1011654821	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MREERRLVWRVLRNWTEIAQGGRFPRCEEIDPWMRGEDGPNCVLIAVEWSIELSHFVVVGVNLA
Ga0070698_1003156944	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKAELRLVWRVLRHWEEIADSGRFPRRDEIEPWFLSEDGANCVLIAVEWPIKLSHFVVVGVNL
Ga0066703_104622561	3300005568	Soil	MREERRLVWRVLRHWKEIADGGRFPRRDEIDPWLQGEDGANCLLIAVRWSIELSHFIVVGVNLAGALC
Ga0070762_110831381	3300005602	Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHF
Ga0066903_1010475665	3300005764	Tropical Forest Soil	MKEERRLVWRVPCHWNDTADGGRFPRRDEIDPWFLCEDGANCLLIAVEWPGSSFRISSSSE*
Ga0066903_1015214451	3300005764	Tropical Forest Soil	MIKQERRLVWRVLRRWKEIELRGHIPRRDEVDHFLRGEDGANCLLIAVGWSIERSH
Ga0066903_1018819732	3300005764	Tropical Forest Soil	MEEERRLVYRVLRHWTEIARGGCLPRRDEINPYLVGEDGANCLLIAVGWSI
Ga0066903_1039722432	3300005764	Tropical Forest Soil	MKEERRLVSRVLRSWKEIADGGRFPRCDEITAWMQGEDGANCLLITVER
Ga0066903_1056726712	3300005764	Tropical Forest Soil	MEEERRLAHRVLRHWTGIARGGCLPRRDEINPYLVGEDGANCLLIAVGWSIELSHFVVVGVNLAVALCPT
Ga0070717_103421961	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMKEERRLVWRVLRRWTEISDGGRFPRRDQIDPWMRGEDGANTLLIAVESPIELSHFVVVGVNLAIALCPTDTLAGVLLSQ
Ga0070717_118428041	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTEERRLAWRVLRHWTEIAQFGRLPRRAEIERFMLGEDGANCVLIGVESPIELSYFVSVF
Ga0075018_106375292	3300006172	Watersheds	VPSHNIYRARLTERIDEERRLVWRVLRHWKEIADGGRFPCRDEIESWVRGEDGPNLLVIAVQSPIKLSNFVVVAVNLTVVLCPTASL
Ga0070716_1014267272	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VLRNWTEIAHGGRFPRCEEIDPWMRGEDGANCVLIAVEWSIEL
Ga0070712_1005342471	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKEERRLVWRVLRRWKETADSGRFLGRDEVDPWLQGEDGANLLLIAVQSPIELSHFVAVGVNLAVALCPTDTLAGVLLSHALGIGN*
Ga0070712_1014833851	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKEERRLVRRVLRNWTEIAHGGRFPRCEEIDCWMRGEDGANCVLIAVEWSIELS
Ga0070712_1016401671	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MEEERRLVWRVLRHWSEMKAGGRFPRVDDIGPWMFGEDGPNCLLIAVEAPIELSHFVSVGVNLAV
Ga0070712_1019922352	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKEERRLVWRVLRHWKEIADSGRFPRRDEINAWMRGEDGANCLLIVVEWSIELS
Ga0070765_1011532541	3300006176	Soil	MREERRLVWRVLRRWRGIANRGRVPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHF
Ga0070765_1012844761	3300006176	Soil	MKEERRLVWRVLRRWTEISDGGRFPRRDQIDPWMRGEDGANTLLIAVESPIELSHFVVVGVNLAIALCPTDTLAG
Ga0079222_108209892	3300006755	Agricultural Soil	MREERRLVWRVLRNWTEIAHGGRFPCRDEIDPWLRGEDGANCLLITVEWSIELSHFVVVGVNLAVALC
Ga0075433_115906441	3300006852	Populus Rhizosphere	MREERRLVWRVLRHWEEIKDGGRFPHREEVDPWLQGEDGANCLLIAVESPIELSYLVAVGVNLAIALCSPDTLAGVLLS
Ga0073928_102547242	3300006893	Iron-Sulfur Acid Spring	MKEERRLVWRVLRNWTEIAHGGRFPCREEIDPWLRGEDGANCLLITVEWSIELSH
Ga0079219_112213151	3300006954	Agricultural Soil	MREERRLVWRVLRQWKDIAGGGRFPRRDDIEPWILGEDGPNCLLIEAQSPIELSRFVSVGVNLAVALCRTDTLAGVLLSR
Ga0075435_1015162572	3300007076	Populus Rhizosphere	MREERRLVWRALRHWKEIKDRGRFPRRDEVDPWLQGEDGANCLLIAVE
Ga0099791_105113891	3300007255	Vadose Zone Soil	MRAERRLVWRVLRHWTEMVNGRGCPRRDDIDPWILGEDWVNCLLIAVQSPVELSHFISVGENLAVALSPKDTLAGVLLSHLPRV
Ga0099793_105027332	3300007258	Vadose Zone Soil	MTEERRLAWRVLRHWTEIAQFGRLPRRAEIERFMLGEDGANCVLIGVESPIELSYFVSVG
Ga0099792_100930501	3300009143	Vadose Zone Soil	MKEERRLVGRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHF
Ga0099792_107262742	3300009143	Vadose Zone Soil	MKEERRLVWRVLRNWTEIAHGGRFPRCEEIDPWMRGEDGANCVLSAVEWSIELSHFVVVG
Ga0099792_110780041	3300009143	Vadose Zone Soil	MREERRLVWRVLRHWRGITNRGRLPRRDDIEPWLLGEDGRNCLLVAVQSP
Ga0126374_113148571	3300009792	Tropical Forest Soil	MHEERRLVWRVLRHWTEIANEGRLPRRDEIDLWLRTKDGPDCLLIAVESPIELSHFVAVGVNVAIALCHTDTLAG
Ga0126373_101047221	3300010048	Tropical Forest Soil	MQEERRLVWRVLHRWKEISDSGCFPRRDEIDPWLRGEDGKNCLLIAVESPIELSYFVAVGVNLAIALCRTDTLAGVLLSRAPRVA
Ga0126378_123964151	3300010361	Tropical Forest Soil	MQEERRLVWRVLHRWKEISDSGCFPRRDEIDPWLRGEDGKNCLLIAVESPIELSYFVAVGVNL
Ga0126379_111506262	3300010366	Tropical Forest Soil	MDGERRLVWRVLRRSTEIANEGRFPRRDEIGLWMRTKDRPNCLLIAVGSPIELSHFVAVG
Ga0126381_1002197841	3300010376	Tropical Forest Soil	MEEERRLVHRVLRHWTGIARGGCLPRRDEINPYLVGEDGANCLLIAVGWSI
Ga0126381_1016176991	3300010376	Tropical Forest Soil	MQQERRLVWRVLRQWKEIADSGRLPRRDEIESWLQGEDGANCLLIA
Ga0134126_119595482	3300010396	Terrestrial Soil	ERRLVWRVLRHWSEMKAGGRFPRVDDIGPWMFGEDGPNCLLIAVEAPIELSHFVSVGVNLAVALCKTDTLASMIWSKRWA*
Ga0137391_102571803	3300011270	Vadose Zone Soil	MREERRLVWRVLRHWEEMVGGRSCPRRDEIDPWMLGDDWANCLLIAVQSPVELSHFITVGENLAVALCPKDTLAGVLLSH
Ga0137382_101181631	3300012200	Vadose Zone Soil	MKEERRLVWRVLRQWKEIADGGRLPRRDEIYPWLQGEDGANCLLIAVESSI
Ga0137399_117136431	3300012203	Vadose Zone Soil	MREERRLVWRVLRHWEEMVGGRSCPRRDEIDPWMLGEDWANCLLIAVQSPVELSHFITVGENLAVALCPKDTLAGV
Ga0137358_103216232	3300012582	Vadose Zone Soil	MKEERRLVWRVLRNWTEIAHGGCFPRCEEIDSWMRGEDGANCVLIAVEWSIELSHFVVVGVTLAVALCPPDTLAGTLLSSVP*
Ga0137358_107424921	3300012582	Vadose Zone Soil	MEEERRLVYRVLRHWTEIARGGRLPRRDEINSYIRGADAANCLLIAVRTPIERSHFVTIGVSLAVALCPTNTVAGMLLSRPSR
Ga0126369_100392191	3300012971	Tropical Forest Soil	MREERRLVWRVLRHWKEIADEGRFPRRDEIDPWMQGDDGANCVLIAVGWSIELSHFVVVGVNLAV
Ga0126369_117977941	3300012971	Tropical Forest Soil	MKEERRLVWRVPCHWNDTADGGRFPHRDEIDPWFLCEDGANCLLIAVEWPGSSFRISSSS
Ga0126369_118657391	3300012971	Tropical Forest Soil	MQEERRLVWRVLRQWKEIADSGRLPRRDEIESWLQGEDGANCLLIAVGWSVEHSQLIVVGVNLAAAVCATDTLAELFLSRVL
Ga0182036_100654161	3300016270	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLRGQDGANCLLIAVGWSVELSQTVVVGVNLAAAL
Ga0182041_107987631	3300016294	Soil	VREERRLIWRVLRHWKDIADGGRLPRRDEIDPWLQGEDGANCLLIAIGWSIELSHFIVVGVNLAG
Ga0182033_118998861	3300016319	Soil	MKEERRLVWRVLRHWTEISHSGRFPRRDQIDPWMRGEDGANCLVITVESPIELSHFVVVGVNLAIALCPTDTLAGVLL
Ga0182033_120735391	3300016319	Soil	VCAAGKYDQAVMREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNL
Ga0182034_107379411	3300016371	Soil	VWRVLRQWKGIADGERFPRRDEIDPWLQGQDGANCLLIAVGWSVELS
Ga0066667_114761781	3300018433	Grasslands Soil	MQEERRLVWRVLRHWKEIADGGRLPRREIYPWLQGEDGANCLLIAVEWSIELSHFVVVGVNLAVALCSTDTLAGVLLSSVPQVVS
Ga0210407_100872341	3300020579	Soil	MKEERRLVWRVLRNWTEIAHGGRFPRCEEIDRWMRGEDGANCVLIAVEWSIELSHFVVVGVNLAVALCSTDTLAGTL
Ga0210407_107033421	3300020579	Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHFVEVGVNLAVALCPTDTLAGVLLSQLPR
Ga0210403_100650565	3300020580	Soil	MKEERRLVWRVLRRWKEIAESGRLPLRDEVDPWLQGEDGANCLLIAVESPIELSHFVVVGVNLAVTLC
Ga0210403_102353183	3300020580	Soil	MREERRLVWRVLRHWRGITNRGRLPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCATDTLAGVLL
Ga0210399_102460003	3300020581	Soil	MREERRLVWRVLRHWRGIVSRGRLPRCDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCATDTLA
Ga0210395_106891411	3300020582	Soil	MKEERRLVGRVLRNWTQIAHGGRFPRCEEIDRWMRGEDGANCVLIAVEWSIELSHFVVVGVNLAVALCSTDTLAGTLLRL
Ga0210401_104656613	3300020583	Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHFVEVGVNLAVALCPTDTLAGVLLSQ
Ga0210404_101621512	3300021088	Soil	MREERRLVWRVLRHWRGIANRGRVPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAV
Ga0210406_102744411	3300021168	Soil	MDEERRLVWRVLRHWKEIADGGRFPCRDEIESWVRGEDGPNLLLIAVQSPIKLSYFVVVAVNLTVVLCPTASLGGALLSRLPRVVSARCGL
Ga0210400_101609061	3300021170	Soil	MREERRLVWRVLRHWRGIANRGRVPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCATDTPAGVLLS
Ga0210400_103122222	3300021170	Soil	MDEERRLVWRVLRHWKEIADGGRFPCRDEIESWVRGEDGPNLLLIAVQSPIKLSYFVVVGVNLTVVLCPTASLAGV
Ga0210400_114467611	3300021170	Soil	MKEERRLVWRMLRRWKEIAESGRFPLRGEVDPWLQGEDGANCLLIAVESPIELSHFVVVGVNLAVAL
Ga0210400_114519192	3300021170	Soil	MREERRLVWRVLRHWKEIADCGRFPRRDEIDPWLRGGDGANCLLIAVGWSIELSHFIVVGVNL
Ga0210405_101407521	3300021171	Soil	MKEERRLVWRVLRHWTEIANGGRFPRRVEIDPLMLGEDGANLVLMAVQSPIEL
Ga0210408_106575832	3300021178	Soil	MKEERRLVRRVLRNWTEIAHGGRFPRCEEIDSWMRGEDGANCVLIAVEWSIELSHFVVVG
Ga0210408_113682911	3300021178	Soil	MKKERRLAWRVLRHWTEIAQGGRLPRRDEIEGWMVGEDAANCLLIGVESPIELSYFVSVGLNLATALCSADTLAGVLLSLTPQV
Ga0210396_102041031	3300021180	Soil	MDEERRLVWRVLRHWKEIADGGRFPCRDEIESWVRGEDGPNLLLIAVQSPIKLSNFVVVAVNLTVVLCPTASLAGV
Ga0210389_104685421	3300021404	Soil	MKEERRLVGRVLRNWTEIAHDGRFPRCEEIDPWMRGEDGANCVLIAVEWSIELSHFVVVG
Ga0210383_110010492	3300021407	Soil	MDEERRLVWRVLRHWKEIADGGRFPCRDEIESWVRGEDGPNLLLIAVQSPIKLSYFVVVAVNLTVVLCPTTSLG
Ga0210394_106764922	3300021420	Soil	MREERRLVWRVLRHWRGITNRGRLPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCATDTLAGVL
Ga0210390_101373103	3300021474	Soil	MKEERRLVGRVLRNWTEIAHGGRFPRCEEIDRWMRGEDGANCVLIAVEWSIELSHFVVVGVNLAVRS
Ga0210390_113733931	3300021474	Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQ
Ga0210398_113268111	3300021477	Soil	MREERRLVWRVLRHWRGIASRGRVPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCATDTLAGVL
Ga0210402_102994811	3300021478	Soil	MREERRLVWRVLRHWRGITNRGRLPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCATDTR
Ga0210402_108482981	3300021478	Soil	MREERRLVWRVLRHWRGIASRGRVPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCATDTLAGV
Ga0210409_106753271	3300021559	Soil	MKEERRLVWRVLRNWTEIAHDGRFPRCEEIDPWMRGEDGANCVLIAVEWSIELSHFVVVGVNLAVALCSTDTLAGTL
Ga0126371_105228851	3300021560	Tropical Forest Soil	MQEERRLVWRILRQWQEISAGGGLPRGDEIDPRMRGEDGKNCLLIAVESPIELSYFVA
Ga0126371_132074391	3300021560	Tropical Forest Soil	MQEERRLVWRILRQWQEISAGGRFPRRDEIDPWLRGENGKNCLLIAVESPIELSYFVA
Ga0212123_103713992	3300022557	Iron-Sulfur Acid Spring	MKEERRLVWRVLRNWTEIAHGGRFPCREEIDPWLRGEDGANCVLIAVEWSIELSHFVVVGVNLAVALCSTDTL
Ga0207685_102450901	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKEERRLVWRVLRHWKVIADSGRFPRRDEIDSWMRGEDGANCLLIVVEWSIELSHFVVVGVNLAVALCPTDTLAG
Ga0207693_104517881	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKEERRLVWRVLRHWTEISHSGRFPRRDQIGPWMQGEGGANSLLIAVESPIELSHFVVVGVNLAIALCPT
Ga0207693_105737611	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MREERRLVWRVLRHWKEIADGGRFPRRDEIDPWLRGEDGANCLLIAVGWSIELSHFIVVGVNLAGALCATDTLAGVLL
Ga0207663_105517731	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRAERRLVWRVLRHWTEMVNGRGCPRRDEIDPWILGEDWVNCLLIAVQSPVKLSHFISVGENLAVALCPKDTLAGVL
Ga0207664_106627431	3300025929	Agricultural Soil	MKEERRLVWRVLRNWTEIAQGGRFPRCEEIDPWMRGEDGPNCVLIAVEWSIELSHFVVVGVNLAVALCSTDTLAGTLLSSV
Ga0209153_10968511	3300026312	Soil	MKEERRLVWRVLRNWTEIAHCGRFPRCEEIDPWMRGEDGANCVLIAVEWSIELSHFVVVGVNLA
Ga0257149_10546221	3300026355	Soil	MKEERRLVGRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHFLLVGVNLAVALCATDTLAGVLLSH
Ga0179587_111573791	3300026557	Vadose Zone Soil	MKEERRLVGRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPI
Ga0208241_10801281	3300027297	Forest Soil	MKEERRLVWRVLRHWTEIANGGRFPRRVEIDPLMLGEDGANLVLMAVQSPIELSHFVVVGVNLA
Ga0209275_109080172	3300027884	Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHFVE
Ga0209488_108773671	3300027903	Vadose Zone Soil	MKEERRLVWRVLRQWKEIADGGRLPRRDEIYPWLQGEDGANGLLIAVESSIEAFAFRRGVVRD
Ga0209006_104704161	3300027908	Forest Soil	MKEERRLVWRVLRRWKEIAESGRLPLRDEVDPWLQGEDGANCLLIAVESPI
Ga0308309_102204621	3300028906	Soil	MREERRLVWRVLRHWKEIADGGRFPRRDEIDPWLRGEDGANCLLIAVGWSIELSHLIVVGVNL
Ga0222749_101194311	3300029636	Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQSPIELSHFVQVGVN
Ga0318538_106555161	3300031546	Soil	MREERRLVWRVLRQWKEIADGGRFPHRDEIDPWLQGEDGANCLLIAVGW
Ga0310915_107488841	3300031573	Soil	VCAAAKYDQAVMREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAIGWSVELSQTVVVGVNLAAALCPTDTL
Ga0318555_101631231	3300031640	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLRIAVGWSVEL
Ga0318561_101431832	3300031679	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNLE
Ga0318560_101719763	3300031682	Soil	MKEERRLVWRVLRNWTEIAHGGCFPRCEEIDPWMRGEDGANCVLIAVEWSIELRISSWSE
Ga0306917_105877172	3300031719	Soil	MQEERRLVWRVARRWMEIGHDGRLPRRDEIDRCVMGEDWENCLLIAVQSPIEYSRFVSVGVNLAVALCPTDTL
Ga0307469_112789151	3300031720	Hardwood Forest Soil	MRAERRLVWRVLRHWTEMVSGRGCPRRDEIDPWMLGEDWVNCLLIAVQSPVELSHFITVGENLAVALCPKDTLAGVLLSHL
Ga0318493_105540041	3300031723	Soil	MEKERRLVYRVLRRWTEIARGGRMPRRNEINPYILGEDGANCLLIAVRSPIERSHFVMVGVNLTLALRPTDTLTGVL
Ga0318494_105344411	3300031751	Soil	MREERRLAWRVLRQWKEIADGGRFPHRDEIDPWLQGEDGANCLLIAVGWSVEFSQTVVVG
Ga0307477_101556131	3300031753	Hardwood Forest Soil	MKEERRLVWRVLRHWTEISHSGRFPRRDQIDPWMQGEGGANSLLIAVESPIELSHFVVVGVNLAIALCPTDTLAGVLLSQ
Ga0307477_111487061	3300031753	Hardwood Forest Soil	MREERRLVWRVLRHWRGIANRGRVPRRGDVEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCA
Ga0307475_108641713	3300031754	Hardwood Forest Soil	MKDERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGVNLVLMAVQSPIELSHFVEVGVN
Ga0318508_11055401	3300031780	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVV
Ga0318548_104347012	3300031793	Soil	RVPCHWNDTADGGRFPRRDEIDPWFLCEDGANCLLIAVEWPGSSFRISSSSE
Ga0318576_102527421	3300031796	Soil	MEKERRLVYRVLRRWTEIARGGRMPRRNEINPYILGEDGANCLLIAVRSPIERSHFVMVGVN
Ga0307473_101070461	3300031820	Hardwood Forest Soil	MKEERRLVWRVLRRWKETADSGRFLGRDEVDPWLQGEDGANLLLIAVQSPIELSHFVAVGVNLAVALCPTDTLAGVLLSHVPDGKPIFAPDFCAS
Ga0318567_102882812	3300031821	Soil	MNVERRLVWRVLRHWEEIADSGRFPRRDEIEPWFLGEDGANCLLIAVESPIELSHFVVVGVNLAVALPYRHVG
Ga0318499_101134593	3300031832	Soil	MRHWTKIARRGRFPRRDEIDPYLIGEDGANCLLIAVEAPIELSHFVMVGVNL
Ga0310917_102762362	3300031833	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLRIAVGWSVE
Ga0310917_104185322	3300031833	Soil	MQEERRLVWRVARRWMEIGHDGRLPRRDEIDRCVMGEDWENCLLIAVQSPIEYSRFVSVGVNLAVALCPTDTLAGV
Ga0318511_104178751	3300031845	Soil	MKEERRLVWRVLRYWKEMAHGGRFPRRDEIEPWVQGEDGANLLLIAVQSPIE
Ga0318512_104821622	3300031846	Soil	MKEERRLVWRVLRQWKGIADGGRFPHRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVN
Ga0306919_100182325	3300031879	Soil	MRHWTKIARRGRFPRRDEIDPYLIGEDGANCLLIAVEAPIELSHFVMVGVNLAVALC
Ga0306919_100678434	3300031879	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNLAAAL
Ga0306919_107184791	3300031879	Soil	VARLAQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNLAAAL
Ga0306919_112805892	3300031879	Soil	MREERRLVWRVLRQWKGIADRGRFPHRDEIDPWLQGEDGANCLLIAVGWSVEFSQAVVVGVNLAAALCPT
Ga0306925_100437021	3300031890	Soil	MREERRLVWRVLRQWKEIADGGRFPCRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNLAA
Ga0306925_100665347	3300031890	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVN
Ga0306925_109141011	3300031890	Soil	MQEERRLVWRVARRWMEIGHDGRLPRRDEIDRCVMGEDWENCLLIAVQSPIEYSRFVSVGVNLAVALCPTDT
Ga0306925_121555761	3300031890	Soil	MKEERRLVWRVPCHWNDTADGGRFPRRDEIDPWFLCEDGANCLLIAVEWPGSSFRISSSS
Ga0318520_102828982	3300031897	Soil	MEKERRLVYRVLRRWTEIARGGRMPRRNEINPYILDEDGANCLLIAVRSPIERSHFVMV
Ga0306923_109440281	3300031910	Soil	MREERRLAWRVLRQWKEIADGGRFPHRDEIDPWLQGEDGANCLLIAVGWS
Ga0306923_115369371	3300031910	Soil	VCAAGKYDQAVMREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGHDGANCLLIAVGWSVELSQ
Ga0306923_116544781	3300031910	Soil	VCAAAKYDQAVMREERRLVWRVLRQWKEIADGGRFPCRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNLAA
Ga0306921_104573664	3300031912	Soil	MKVERRLVWRVLRRWEEIADSGRFPRRDEIELWFLGEDGANCLLIAVESPIELSHFVVVGVNLAIALCPTDTLAGML
Ga0306921_107410631	3300031912	Soil	MAIVGLNFNKNSTNPLPVCAAAKYDQAVMREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAIGWSVELSQTVVVGVN
Ga0306921_113436532	3300031912	Soil	VCAAAKYDQAVMREERRLVWRVLRQWKEIADGGRFPCRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNLAAALC
Ga0310912_104017111	3300031941	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLRIAVGWSV
Ga0310912_107376642	3300031941	Soil	VYAAAKFDQAEMREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGEDGANCLLIAVGWSVEFSRTV
Ga0310912_108630231	3300031941	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNLAAALCPTDTLA
Ga0310912_109648362	3300031941	Soil	MREERRLVWRVLRQWKEIADGGRFPCRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNLAAALCPTDTLA
Ga0310913_103666282	3300031945	Soil	MREERRLVWRVLRQWKGIADRGRFPHRDEIDPWLQGEDGANCLLIAVG
Ga0310909_105096612	3300031947	Soil	MQEERRLVWRVARRWMEIGHDGRLPRRDEIDRCVMGEDWENCLLIAV
Ga0307479_111438002	3300031962	Hardwood Forest Soil	MREERRLVWRVLRHWRGIANRGRVPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLAVALCATDT
Ga0307479_115960701	3300031962	Hardwood Forest Soil	MREERRLVWRVLRHWKEIADGGRFPRRDEIDPWLQGEDGANCLLVAVGWSIELSHFVVVGVNLASALCAADTFAGVLLSSVSQVV
Ga0307479_119296841	3300031962	Hardwood Forest Soil	MREERRLVWRVLRRWRGIANRGRVPRRDDIEPWLLGEDGRNCLLVAVQSPIELSHFLLVGVNLA
Ga0318531_103592852	3300031981	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVG
Ga0318549_101845081	3300032041	Soil	MQEERRLVWRVARRWMEIGHDGRLPRRDEIDRCVMGEDWENCLLIAVQSPIEYSRFVSVGVNLAVALCPTDTLA
Ga0318533_100252161	3300032059	Soil	MEEERRLVWRVMRHWTKIARRGRFPRRDEIDPYLIGEDGANCLLIAVE
Ga0318533_109745532	3300032059	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGW
Ga0318514_101513333	3300032066	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLRIALG
Ga0306924_109837001	3300032076	Soil	VCAAGKYDQAVMREERRLVWRVLRQWKGIADGGCFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVV
Ga0318518_105498972	3300032090	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLLIAVGWSVELSQTVVVGVNL
Ga0318577_101126673	3300032091	Soil	MREERRLVWRVLRQWKGIADGGRFPRRDEIDPWLQGQDGANCLRIAVGWSVELSQTVVVGVNLAAALCPTDT
Ga0318577_104371362	3300032091	Soil	MREERRLVWRVLRQWKGIADRGRFPHRDEIDPWLQGEDGANCLLIAVGWSVEFSQ
Ga0318540_100265233	3300032094	Soil	MEKERRLVYRVLRRWTEIARGGRMPRRNEINPYILGEDGANCLLIAVRSPIERSHFVMVGVNLTLALR
Ga0307470_101770193	3300032174	Hardwood Forest Soil	MKEERRLVWRVLRHWTEIANGGRFPRRDEIDPWMLGEDGANLVLMAVQS
Ga0307472_1016509962	3300032205	Hardwood Forest Soil	MKEERRLVWRVLRRWTEISDGGRFPRRDQIDPWMRGEDGANTLLIAVE
Ga0306920_1006853731	3300032261	Soil	MKEERRLVWRVLRHWTEISHSGRFPRRDQIDPWMRGEDGANCLVITVESPIELSHFVVVG
Ga0306920_1024032381	3300032261	Soil	VREERRLIWRVLRHWKDIADGGRLPRRDEIDPWLQGEDGANCLLIAIGWSIELSHFIVVGVNLAGALCATDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039318

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences