Metagenome / Metatranscriptome Family F039271

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039271
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	59 residues
Representative Sequence	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Number of Associated Samples	86
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.39 %
% of genes near scaffold ends (potentially truncated)	38.41 %
% of genes from short scaffolds (< 2000 bps)	79.88 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.683 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.610 % of family members)
Environment Ontology (ENVO)	Unclassified (44.512 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.951 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.14% β-sheet: 6.90% Coil/Unstructured: 68.97%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF00239	Resolvase	3.66
PF04392	ABC_sub_bind	3.05
PF00589	Phage_integrase	2.44
PF00571	CBS	1.83
PF13505	OMP_b-brl	1.83
PF00313	CSD	1.22
PF07885	Ion_trans_2	1.22
PF13531	SBP_bac_11	1.22
PF13975	gag-asp_proteas	1.22
PF07045	DUF1330	1.22
PF01453	B_lectin	1.22
PF03703	bPH_2	1.22
PF04613	LpxD	0.61
PF01527	HTH_Tnp_1	0.61
PF09351	DUF1993	0.61
PF04355	SmpA_OmlA	0.61
PF13936	HTH_38	0.61
PF13460	NAD_binding_10	0.61
PF04964	Flp_Fap	0.61
PF00211	Guanylate_cyc	0.61
PF03404	Mo-co_dimer	0.61
PF09990	DUF2231	0.61
PF04226	Transgly_assoc	0.61
PF00293	NUDIX	0.61
PF00912	Transgly	0.61
PF00891	Methyltransf_2	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	3.66
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	3.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.05
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	1.22
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	1.22
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.22
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.61
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.61
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.61
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.61
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	0.61
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.61
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.61
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
All Organisms	root	All Organisms	32.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
cellular organisms	root	All Organisms → cellular organisms	32.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.51 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.22 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.59 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.22 %
Holosporales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales	1.22 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.61 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.54 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.22 %
Candidatus Paracaedibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae	1.22 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.22 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.61 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.54 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.22 %
Candidatus Odyssella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella	1.22 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.22 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.61 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
unclassified Candidatus Odyssella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella	1.22 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.22 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.22 %
Sphingobium fuliginis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium fuliginis	0.61 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.61 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.68 %
Candidatus Odyssella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	1.22 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.22 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.22 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.61 %
Sphingobium fuliginis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium fuliginis	0.61 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10341738	Not Available	829	Open in IMG/M
3300005332\|Ga0066388_100311059	Not Available	2221	Open in IMG/M
3300005332\|Ga0066388_101062509	Not Available	1365	Open in IMG/M
3300005332\|Ga0066388_101379562	Not Available	1222	Open in IMG/M
3300005332\|Ga0066388_103145627	Not Available	843	Open in IMG/M
3300005332\|Ga0066388_105591258	Not Available	636	Open in IMG/M
3300005332\|Ga0066388_105873272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300005332\|Ga0066388_106881044	Not Available	572	Open in IMG/M
3300005332\|Ga0066388_108519304	Not Available	510	Open in IMG/M
3300005436\|Ga0070713_100668831	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005436\|Ga0070713_101983575	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005764\|Ga0066903_100429636	All Organisms → cellular organisms → Bacteria	2193	Open in IMG/M
3300005764\|Ga0066903_101540550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1257	Open in IMG/M
3300005764\|Ga0066903_101551111	Not Available	1253	Open in IMG/M
3300005764\|Ga0066903_101553129	Not Available	1252	Open in IMG/M
3300005764\|Ga0066903_103180277	Not Available	888	Open in IMG/M
3300005764\|Ga0066903_104234162	Not Available	767	Open in IMG/M
3300005764\|Ga0066903_104716775	Not Available	725	Open in IMG/M
3300005764\|Ga0066903_104960911	Not Available	706	Open in IMG/M
3300005764\|Ga0066903_106248232	Not Available	622	Open in IMG/M
3300005764\|Ga0066903_107076389	Not Available	581	Open in IMG/M
3300005764\|Ga0066903_107210152	Not Available	575	Open in IMG/M
3300006028\|Ga0070717_11828267	Not Available	549	Open in IMG/M
3300006041\|Ga0075023_100166269	Not Available	825	Open in IMG/M
3300006086\|Ga0075019_10543857	Not Available	724	Open in IMG/M
3300006174\|Ga0075014_100018272	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300006755\|Ga0079222_10980606	Not Available	723	Open in IMG/M
3300009792\|Ga0126374_10244655	Not Available	1167	Open in IMG/M
3300010046\|Ga0126384_11511135	Not Available	630	Open in IMG/M
3300010048\|Ga0126373_10050373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3700	Open in IMG/M
3300010048\|Ga0126373_10063830	All Organisms → cellular organisms → Bacteria	3307	Open in IMG/M
3300010048\|Ga0126373_10109578	Not Available	2567	Open in IMG/M
3300010048\|Ga0126373_10195756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1956	Open in IMG/M
3300010048\|Ga0126373_10409022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium fuliginis	1383	Open in IMG/M
3300010048\|Ga0126373_10698549	Not Available	1072	Open in IMG/M
3300010048\|Ga0126373_11218204	Not Available	819	Open in IMG/M
3300010048\|Ga0126373_11705346	Not Available	694	Open in IMG/M
3300010358\|Ga0126370_10011684	All Organisms → cellular organisms → Bacteria	4730	Open in IMG/M
3300010358\|Ga0126370_10505366	Not Available	1022	Open in IMG/M
3300010359\|Ga0126376_10666338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	995	Open in IMG/M
3300010359\|Ga0126376_11186674	Not Available	777	Open in IMG/M
3300010359\|Ga0126376_11314690	Not Available	744	Open in IMG/M
3300010361\|Ga0126378_11350803	Not Available	806	Open in IMG/M
3300010361\|Ga0126378_13386120	Not Available	506	Open in IMG/M
3300010376\|Ga0126381_100433640	Not Available	1839	Open in IMG/M
3300010376\|Ga0126381_100846720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1314	Open in IMG/M
3300010376\|Ga0126381_100879483	Not Available	1289	Open in IMG/M
3300010376\|Ga0126381_102205988	Not Available	792	Open in IMG/M
3300010376\|Ga0126381_102923476	Not Available	680	Open in IMG/M
3300010376\|Ga0126381_103029140	Not Available	667	Open in IMG/M
3300010376\|Ga0126381_103827123	Not Available	588	Open in IMG/M
3300010398\|Ga0126383_10784420	Not Available	1035	Open in IMG/M
3300010398\|Ga0126383_12348617	Not Available	619	Open in IMG/M
3300010863\|Ga0124850_1002844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	5155	Open in IMG/M
3300010863\|Ga0124850_1022005	Not Available	2044	Open in IMG/M
3300010863\|Ga0124850_1025285	Not Available	1906	Open in IMG/M
3300012971\|Ga0126369_10274113	Not Available	1673	Open in IMG/M
3300015371\|Ga0132258_10801454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2375	Open in IMG/M
3300016270\|Ga0182036_10981130	Not Available	696	Open in IMG/M
3300016270\|Ga0182036_11701760	Not Available	532	Open in IMG/M
3300016294\|Ga0182041_10157911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1759	Open in IMG/M
3300016319\|Ga0182033_11058310	Not Available	723	Open in IMG/M
3300016341\|Ga0182035_10296252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1325	Open in IMG/M
3300016341\|Ga0182035_10598000	Not Available	953	Open in IMG/M
3300016341\|Ga0182035_11455920	Not Available	616	Open in IMG/M
3300016357\|Ga0182032_10258392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1357	Open in IMG/M
3300016357\|Ga0182032_11299526	Not Available	628	Open in IMG/M
3300016371\|Ga0182034_12023349	Not Available	509	Open in IMG/M
3300016387\|Ga0182040_10866571	Not Available	747	Open in IMG/M
3300016404\|Ga0182037_10598267	Not Available	936	Open in IMG/M
3300016422\|Ga0182039_10724402	Not Available	878	Open in IMG/M
3300016422\|Ga0182039_12204829	Not Available	508	Open in IMG/M
3300016445\|Ga0182038_10214993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1523	Open in IMG/M
3300016445\|Ga0182038_10352073	Not Available	1220	Open in IMG/M
3300016445\|Ga0182038_10381795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	1176	Open in IMG/M
3300016445\|Ga0182038_11154321	Not Available	689	Open in IMG/M
3300016445\|Ga0182038_11315893	Not Available	646	Open in IMG/M
3300017936\|Ga0187821_10214216	Not Available	744	Open in IMG/M
3300017955\|Ga0187817_11019992	Not Available	530	Open in IMG/M
3300017959\|Ga0187779_10585114	Not Available	746	Open in IMG/M
3300017970\|Ga0187783_10005370	All Organisms → cellular organisms → Bacteria	9456	Open in IMG/M
3300017970\|Ga0187783_10008442	All Organisms → cellular organisms → Bacteria → Proteobacteria	7562	Open in IMG/M
3300017970\|Ga0187783_11040855	Not Available	590	Open in IMG/M
3300017994\|Ga0187822_10155127	Not Available	738	Open in IMG/M
3300018064\|Ga0187773_10733116	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300018085\|Ga0187772_10727135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	713	Open in IMG/M
3300021171\|Ga0210405_10555512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	897	Open in IMG/M
3300021560\|Ga0126371_10064476	All Organisms → cellular organisms → Bacteria → Proteobacteria	3544	Open in IMG/M
3300021560\|Ga0126371_10070346	Not Available	3402	Open in IMG/M
3300021560\|Ga0126371_10632383	Not Available	1219	Open in IMG/M
3300021560\|Ga0126371_11026003	Not Available	966	Open in IMG/M
3300021560\|Ga0126371_11150388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300021560\|Ga0126371_11777781	Not Available	738	Open in IMG/M
3300021560\|Ga0126371_12594757	Not Available	614	Open in IMG/M
3300021560\|Ga0126371_13241458	Not Available	550	Open in IMG/M
3300025928\|Ga0207700_10197939	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300026823\|Ga0207759_105021	Not Available	1112	Open in IMG/M
3300026896\|Ga0207730_1009782	Not Available	832	Open in IMG/M
3300026910\|Ga0207840_1027543	Not Available	555	Open in IMG/M
3300027042\|Ga0207766_1028253	Not Available	630	Open in IMG/M
3300027680\|Ga0207826_1014633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2136	Open in IMG/M
3300027703\|Ga0207862_1093830	Not Available	903	Open in IMG/M
3300027874\|Ga0209465_10046799	Not Available	2064	Open in IMG/M
3300027874\|Ga0209465_10296317	Not Available	810	Open in IMG/M
3300027911\|Ga0209698_10457486	Not Available	992	Open in IMG/M
3300030855\|Ga0075374_10926288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	723	Open in IMG/M
3300031543\|Ga0318516_10034276	Not Available	2696	Open in IMG/M
3300031544\|Ga0318534_10088564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1765	Open in IMG/M
3300031546\|Ga0318538_10028973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2562	Open in IMG/M
3300031573\|Ga0310915_10090287	Not Available	2053	Open in IMG/M
3300031573\|Ga0310915_10111871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1857	Open in IMG/M
3300031573\|Ga0310915_10134359	Not Available	1700	Open in IMG/M
3300031679\|Ga0318561_10079808	Not Available	1693	Open in IMG/M
3300031680\|Ga0318574_10030553	Not Available	2719	Open in IMG/M
3300031682\|Ga0318560_10035011	Not Available	2402	Open in IMG/M
3300031708\|Ga0310686_117549664	Not Available	968	Open in IMG/M
3300031719\|Ga0306917_11219521	Not Available	584	Open in IMG/M
3300031719\|Ga0306917_11245118	Not Available	577	Open in IMG/M
3300031724\|Ga0318500_10022126	All Organisms → cellular organisms → Bacteria	2446	Open in IMG/M
3300031724\|Ga0318500_10740061	Not Available	503	Open in IMG/M
3300031744\|Ga0306918_10483668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300031744\|Ga0306918_10652572	Not Available	824	Open in IMG/M
3300031744\|Ga0306918_10866489	Not Available	704	Open in IMG/M
3300031753\|Ga0307477_10105628	Not Available	1959	Open in IMG/M
3300031768\|Ga0318509_10155144	Not Available	1264	Open in IMG/M
3300031770\|Ga0318521_10118415	Not Available	1477	Open in IMG/M
3300031771\|Ga0318546_10346369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1033	Open in IMG/M
3300031781\|Ga0318547_10850436	Not Available	569	Open in IMG/M
3300031833\|Ga0310917_10276750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1132	Open in IMG/M
3300031846\|Ga0318512_10317317	Not Available	776	Open in IMG/M
3300031879\|Ga0306919_10555448	Not Available	886	Open in IMG/M
3300031879\|Ga0306919_10562439	Not Available	880	Open in IMG/M
3300031879\|Ga0306919_10749467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	751	Open in IMG/M
3300031879\|Ga0306919_11511713	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031890\|Ga0306925_10165166	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300031910\|Ga0306923_10090091	All Organisms → cellular organisms → Bacteria	3450	Open in IMG/M
3300031910\|Ga0306923_10101298	Not Available	3250	Open in IMG/M
3300031910\|Ga0306923_11516890	Not Available	700	Open in IMG/M
3300031910\|Ga0306923_11753417	Not Available	639	Open in IMG/M
3300031912\|Ga0306921_10797933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1078	Open in IMG/M
3300031912\|Ga0306921_11884188	Not Available	640	Open in IMG/M
3300031941\|Ga0310912_10516673	Not Available	931	Open in IMG/M
3300031942\|Ga0310916_10187331	Not Available	1726	Open in IMG/M
3300031942\|Ga0310916_10265618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1448	Open in IMG/M
3300031942\|Ga0310916_10497630	Not Available	1038	Open in IMG/M
3300031945\|Ga0310913_10039958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3025	Open in IMG/M
3300031945\|Ga0310913_10319262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1097	Open in IMG/M
3300031954\|Ga0306926_10192597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2530	Open in IMG/M
3300031959\|Ga0318530_10058649	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300031962\|Ga0307479_10712140	Not Available	982	Open in IMG/M
3300031981\|Ga0318531_10035861	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300032052\|Ga0318506_10003728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4422	Open in IMG/M
3300032067\|Ga0318524_10382097	Not Available	733	Open in IMG/M
3300032068\|Ga0318553_10474969	Not Available	655	Open in IMG/M
3300032076\|Ga0306924_10030675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5831	Open in IMG/M
3300032076\|Ga0306924_11869289	Not Available	623	Open in IMG/M
3300032090\|Ga0318518_10717143	Not Available	508	Open in IMG/M
3300032094\|Ga0318540_10418795	Not Available	647	Open in IMG/M
3300032261\|Ga0306920_100047806	All Organisms → cellular organisms → Bacteria → Proteobacteria	6210	Open in IMG/M
3300032261\|Ga0306920_100054178	Not Available	5837	Open in IMG/M
3300032261\|Ga0306920_100430729	Not Available	1960	Open in IMG/M
3300032261\|Ga0306920_100871068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	1318	Open in IMG/M
3300033289\|Ga0310914_10528431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1066	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.39%
Host-Associated	Host-Associated	0.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.12%
Aquatic	Environmental → Aquatic	4.27%
Plants	Host-Associated → Plants	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.12%
Sediment	Environmental → Aquatic → Sediment	2.44%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.12%
Loam	Environmental → Terrestrial → Soil → Loam	21.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.66%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_103417381	3300004633	Tropical Forest Soil	MRMLIVTLSAVLMLLSIPPQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMNVPQ*
Ga0066388_1003110593	3300005332	Tropical Forest Soil	MRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ*
Ga0066388_1010625093	3300005332	Tropical Forest Soil	MRLLIVTLSAGLMLLSSAPQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPR*
Ga0066388_1013795622	3300005332	Tropical Forest Soil	MARLIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCCCMNVSR*
Ga0066388_1031456272	3300005332	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDV
Ga0066388_1055912582	3300005332	Tropical Forest Soil	MARLIVTLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVSR*
Ga0066388_1058732721	3300005332	Tropical Forest Soil	MRMLIVTLSATLMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDVPR*
Ga0066388_1068810441	3300005332	Tropical Forest Soil	MARLIVMQSAALMLLSIAPQAGAAKSQLRCGGDNLQCGSLAKVCNPKNRKCCCMDVSR*
Ga0066388_1085193042	3300005332	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQAGVAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVPR*
Ga0070713_1006688311	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRMLIVTLSAPLMLLLIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKN
Ga0070713_1019835751	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTTLKGEKGSQIMRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ*
Ga0066903_1004296361	3300005764	Tropical Forest Soil	QIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0066903_1015405501	3300005764	Tropical Forest Soil	QIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGNLAKVCNLRNGKCCCMNVSR
Ga0066903_1015511112	3300005764	Tropical Forest Soil	MAHFALVRGEGSQIMRMLIITLSAALMLLSIAPQAGAAKSHFKCGGDNLQCGNLAKVCNPKNGKCCCMDVPR*
Ga0066903_1015531292	3300005764	Tropical Forest Soil	MRIRIVTLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ*
Ga0066903_1031802771	3300005764	Tropical Forest Soil	MARLIVMQSAALMLLSIAPQAGAAKSQLRCGGDNLQCGSLAKVCNPKNGKCCCMDVSR*
Ga0066903_1042341623	3300005764	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCMDV
Ga0066903_1047167752	3300005764	Tropical Forest Soil	MRMLIVTLSATLMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ*
Ga0066903_1049609112	3300005764	Tropical Forest Soil	MARLIVTLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDV
Ga0066903_1062482321	3300005764	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGTLAKVCNPKNGKCCCMEVPR*
Ga0066903_1070763892	3300005764	Tropical Forest Soil	EPNKGSQIMRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGENLQCGSLAKVCNPKNGKCCCMNVPQ*
Ga0066903_1072101521	3300005764	Tropical Forest Soil	MRILIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCC
Ga0070717_118282671	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTTLKGEKGSQIMRMLIVTLSAALMLLSIPPQAGAAKSQLKRGGDHLQCGSLAKVCNPKNGKCCCMNVPQ*
Ga0075023_1001662693	3300006041	Watersheds	MRMLIVTLSAALILLSIVPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH
Ga0075019_105438572	3300006086	Watersheds	SQIMRMLIVTLSAALMLLSIVPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH*
Ga0075014_1000182723	3300006174	Watersheds	MRMLIVTLSAALMLLSIVPQARAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH
Ga0079222_109806062	3300006755	Agricultural Soil	MRMLIVTLSAPLMLLLIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR*
Ga0126374_102446552	3300009792	Tropical Forest Soil	MLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVSQ*
Ga0126384_115111352	3300010046	Tropical Forest Soil	MLIVTLSAALMLLSIAPQQAGAAKSHLKCGGDNLQCGSLARVCNPKNGKCCCMDVSR*
Ga0126373_100503737	3300010048	Tropical Forest Soil	MLIVTLSAALMLLSIAPQASAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVS
Ga0126373_100638306	3300010048	Tropical Forest Soil	MLIVTLSAVLMLLSIPPQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMNVPQ*
Ga0126373_101095781	3300010048	Tropical Forest Soil	MARLIVMLSAALMLLSIAPQAGAAKSQLECGGDNLQCGSLAKVCNPKNGKCCCMDVSR*
Ga0126373_101957561	3300010048	Tropical Forest Soil	MLIVTLSAALMLLSITPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCC
Ga0126373_104090222	3300010048	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKACNPKNGKCCCMDVSR*
Ga0126373_106985491	3300010048	Tropical Forest Soil	MECGEWSDDQGLKGKKGSQIMRMLIVTLSAALMLLSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ*
Ga0126373_112182042	3300010048	Tropical Forest Soil	MIIVTLSAALMLLSFAPQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPQ*
Ga0126373_117053461	3300010048	Tropical Forest Soil	MRILIVTLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDVPR*
Ga0126370_100116843	3300010358	Tropical Forest Soil	MLIVTLSAALMLLSITPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMNVSQ*
Ga0126370_105053662	3300010358	Tropical Forest Soil	MLIVLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCCCMNVSR*
Ga0126376_106663382	3300010359	Tropical Forest Soil	MAHFALVRAEGSQIMRMLIITLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMNVSQ*
Ga0126376_111866741	3300010359	Tropical Forest Soil	MRLLIVTLSATLMLLSFALQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPR*
Ga0126376_113146901	3300010359	Tropical Forest Soil	MLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ*
Ga0126378_113508031	3300010361	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDV
Ga0126378_122126283	3300010361	Tropical Forest Soil	MLIITLSAALMLLSIAPQAGAAKSRFKCGGDNLQCGNLAKVCNPKN
Ga0126378_133861201	3300010361	Tropical Forest Soil	MRTLIVTLSAAMMLLSIAPQAGAAKSHLKCDGDNLQCGSLAKVCNPKNGKCCCMDVSR*
Ga0126381_1004336402	3300010376	Tropical Forest Soil	MLIVTLSAALMLLSIAPQASAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSP*
Ga0126381_1008467202	3300010376	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR*
Ga0126381_1008794832	3300010376	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSQLKCGGNNLQCGSLAKVCNPKNGKCCCMDVPQ*
Ga0126381_1022059882	3300010376	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCCCMNVSR*
Ga0126381_1029234762	3300010376	Tropical Forest Soil	MTNGLKGEGSQIMRMLIVTLSATLMLLSIPPQAGAAKSQFKCGGDNLQCGSLAKVCNLKSGKCCCMNVPQ*
Ga0126381_1030291401	3300010376	Tropical Forest Soil	MARLIVTLSAALMLLSIAPQAGAAKSQLKCGGNDLQCGNLAKVCNPKNGKCCCMDVSR*
Ga0126381_1038271231	3300010376	Tropical Forest Soil	MARLIVTLSAALMLLSITPQTGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPQ*
Ga0126383_107844202	3300010398	Tropical Forest Soil	MLIVTLSAALMLLSITPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR*
Ga0126383_123486172	3300010398	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCC
Ga0124850_10028446	3300010863	Tropical Forest Soil	MLIVTLSAALMLLSITPQASAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMNVSQ*
Ga0124850_10220051	3300010863	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCAA*
Ga0124850_10252851	3300010863	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKSGKCCCMDVSR*
Ga0126369_102741132	3300012971	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVPR*
Ga0132258_108014543	3300015371	Arabidopsis Rhizosphere	MRILIVTVSAALMLLSIAPQAGAAKSQLKCGGENLQCGSLAKVCNPKNGKCCCMNVSQ*
Ga0182036_109811301	3300016270	Soil	GSQIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0182036_117017601	3300016270	Soil	MLIVTLSATLMLLSIALQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMNVQQ
Ga0182041_101579113	3300016294	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSNLKCGGDNLQCGSLDKVCNPKNGKCCCMDVSR
Ga0182033_110583101	3300016319	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMD
Ga0182035_102962521	3300016341	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSNLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0182035_105980001	3300016341	Soil	LGDRTGSQIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDHLQCGSLAKVCNTKNGKCCCMNVSR
Ga0182035_114559201	3300016341	Soil	GEGSQIMRMLIVTLSAALMLLSNAPQAGAAKSQFKCGGDNLQCGNLAKVCNPKNGKCCCMNVQQ
Ga0182032_102583923	3300016357	Soil	SAALMLLSIAPQAGAAKSHLKCGGDHLQCGSLAKVCNTKNGKCCCMNVSR
Ga0182032_112995261	3300016357	Soil	MAHFALVGGEGSQIMRMLIVTLSATLMLLSIAPQAGAAKSHFKCGGDNLQCGNLAKVCNPKNGKCCCLDVPR
Ga0182034_120233492	3300016371	Soil	MRMLIVTLSAALMLLSNAPQAGAAKSQFKCGGDNLQCGNLAKVCNPKNGKCCCMNV
Ga0182040_108665711	3300016387	Soil	EGSQIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLHCGSLAKVCNPKNGKCCCMDVSR
Ga0182037_105982671	3300016404	Soil	QIMRMLIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCCCMNVSW
Ga0182039_107244021	3300016422	Soil	MRTLIVTLSAVLMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKC
Ga0182039_122048292	3300016422	Soil	MRMLIVALSAAPMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0182038_102149931	3300016445	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKC
Ga0182038_103520734	3300016445	Soil	LVREEGSQIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0182038_103817951	3300016445	Soil	MRMLIVTLSAALMLLSIAPQTGAAKSHFKCGGDNLQCGSLAKVCNLRNGKCCCMN
Ga0182038_111543211	3300016445	Soil	AALMLLSILPQAGAAKSHLKCGGDNLQCGSLVKVCNLRNGKCCCMNVPEPR
Ga0182038_113158931	3300016445	Soil	KFTEPDRGEGSQIMRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGENLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0187821_102142162	3300017936	Freshwater Sediment	MRMLIVTLSAALMLLSIVPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH
Ga0187817_110199922	3300017955	Freshwater Sediment	LSAALMLLSILPQARAAKSHLKCGGDKLQCGNLAKVCNPKNGKCCCASYGTYY
Ga0187779_105851141	3300017959	Tropical Peatland	MRMLIVTLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0187783_100053706	3300017970	Tropical Peatland	MRMLIVTLSAALMLLSIVPQAVAAKRHLKCGGDDLQCGNLAKVCNPKNGKCCCAHYGTYR
Ga0187783_100084429	3300017970	Tropical Peatland	MRMLIVTLSAALMLLSIVPQAGAAKRHLKCGGDDLQCGDLAKVCNPKNGKCCCAHYGTYH
Ga0187783_110408552	3300017970	Tropical Peatland	MRTLIVALSAALLMLTAITSQAGAAESHHKSHHKSHLKCGGDNLQCGSLARVCNPKNGRCCCASYGTYH
Ga0187822_101551273	3300017994	Freshwater Sediment	MLIVTLSAALMLLSIVPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH
Ga0187773_107331162	3300018064	Tropical Peatland	MRMLIVTLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDVS
Ga0187772_107271352	3300018085	Tropical Peatland	MRMLIVTLSAALTLLSIVPQAVAAKRHLKCGGDDLQCGNLAKVCNPKNGKCCCAHY
Ga0210405_105555122	3300021171	Soil	MPMLIVTLSAALMLLSIVPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH
Ga0126371_100644766	3300021560	Tropical Forest Soil	MRMLIVTLSAVLMLLSIPPQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMNVPQ
Ga0126371_100703466	3300021560	Tropical Forest Soil	MRMLIVTLSAALMLLSITPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMNVSQ
Ga0126371_106323831	3300021560	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQASAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMD
Ga0126371_110260032	3300021560	Tropical Forest Soil	MRILIVTLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDVPR
Ga0126371_111503882	3300021560	Tropical Forest Soil	MARLIVMLSAALMLLSIAPQAGAAKSQLECGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0126371_117777812	3300021560	Tropical Forest Soil	MRSLIVTLSVGLMLLSSAPQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMNVPQ
Ga0126371_125947571	3300021560	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKC
Ga0126371_132414581	3300021560	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVP
Ga0207700_101979393	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRMLIVTLSAPLMLLLIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0207759_1050211	3300026823	Tropical Forest Soil	MLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0207730_10097822	3300026896	Tropical Forest Soil	MRTLIVTLSAVLMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMNVSR
Ga0207840_10275431	3300026910	Tropical Forest Soil	MRMLIVTLSSALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNLKNGKCCCMDVSR
Ga0207766_10282532	3300027042	Tropical Forest Soil	MRMLIVTLSSALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCIDVRR
Ga0207826_10146333	3300027680	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNLKNGKCCCMDVSR
Ga0207862_10938301	3300027703	Tropical Forest Soil	MRMLIVTLSSALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCCCMNVSR
Ga0209465_100467991	3300027874	Tropical Forest Soil	MRMLIVTLSAALMLLSITPQAGAAKSHLKCDGDNLQCGSLAKVCNPKNGKCCCMNVSQ
Ga0209465_102963172	3300027874	Tropical Forest Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0209698_104574861	3300027911	Watersheds	HVDDIMGGGSQIMRMLIVTLSAALMLLSIVPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH
Ga0075374_109262881	3300030855	Soil	MRMLIVTLSATLMLLSIVPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH
Ga0318516_100342765	3300031543	Soil	MRMLIVTLSAALMLLSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318534_100885642	3300031544	Soil	MRMLIVMLSAALMLLSILPQAGAAKSHLKCGGDNLQCGSLVKVCNLRNGKCCCMNVPEPR
Ga0318538_100289731	3300031546	Soil	MRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0310915_100902872	3300031573	Soil	MLIVTLSAALMLLSNAPQAGAAKSQFKCGGDNLQCGNLAKVCNPKNGKCCCMNVQQ
Ga0310915_101118713	3300031573	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDHLQCGSLAKVCNTKNGKCCCMNVSR
Ga0310915_101343593	3300031573	Soil	VVAEESESAVHWGEGSQIMRMLIVTLSAALMLLSIAPQAGAAKSQFKCGGDDLQCGSLAKVCNPKNGKCCCMNVSR
Ga0318561_100798084	3300031679	Soil	MECGEWSDDQGLKGKKGSQIMRMLIVTLSAALMLLSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318574_100305534	3300031680	Soil	MRMLIVTLSAALMLLSTPPQAGAAESQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318560_100350114	3300031682	Soil	MECGGWSDDQGLKGKKGSQIMRMLIVTLSAALMLLSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0310686_1175496641	3300031708	Soil	MRMLIVTLSAALMLLSNEPQAGAAKSHLKCGGDNLQCGNLAKVCNPKNGKCCCLSYGTYH
Ga0306917_112195212	3300031719	Soil	MRRRSSPGEGSQIMRMLIVTLSATLMLLSIALQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPR
Ga0306917_112451181	3300031719	Soil	ALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVPR
Ga0318500_100221262	3300031724	Soil	MECGEWSDDQGLKGKKGSQIMRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318500_107400611	3300031724	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNLKNGKCCCMDVSRDVHCRELNFD
Ga0306918_104836683	3300031744	Soil	MRMLIVTLSAALMLLSIPPQAGAAKSHLKCGGDNLQCGSLAKVCNLRNGKCCCMNVSR
Ga0306918_106525721	3300031744	Soil	MRMLIVTLSAALMLLSNAPQAGAAKSHYKCGGDNLQCGSLAKVCNMRNGKCCCMDVPEPR
Ga0306918_108664891	3300031744	Soil	AGEGSQIMRMLIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCCCMNVSW
Ga0307477_101056283	3300031753	Hardwood Forest Soil	MRMLIVALSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0318509_101551444	3300031768	Soil	LIVMLSAALMLLSILPQAGAAKSHLKCGGDNLQCGSLVKVCNLRNGKCCCMNVPEPR
Ga0318521_101184154	3300031770	Soil	MECGEWSDDQGLKGKKGSQIMRMLIVTLSAALMLMSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318546_103463691	3300031771	Soil	SQIMRMLIVTLSAALMLLSTPPQAGAAESQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVP
Ga0318547_108504361	3300031781	Soil	IMRMLIVTLSATLMLLSIALQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPR
Ga0310917_102767502	3300031833	Soil	QGLKGKKGSQIMRMLIVTLSAALMLLSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318512_103173172	3300031846	Soil	KKGSQIMRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0306919_105554482	3300031879	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCCCMNVSW
Ga0306919_105624392	3300031879	Soil	MARLIVMLSAALMLLSIALQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0306919_107494671	3300031879	Soil	SAALMLLSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0306919_115117132	3300031879	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKN
Ga0306925_101651664	3300031890	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVR
Ga0306923_100900912	3300031910	Soil	MLIVTLSATLMLLSIALQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPR
Ga0306923_101012986	3300031910	Soil	WLVRGEGSQIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0306923_115168901	3300031910	Soil	MRMLIVTLSAALMLLSNAPQAGAAKSQFKCGGDNLQCGNLAKVCNPKNGKCCCMNVQQ
Ga0306923_117534172	3300031910	Soil	MLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVR
Ga0306921_107979333	3300031912	Soil	LSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNQRNGKCCCMDVPR
Ga0306921_118841882	3300031912	Soil	SATLMLLSIALQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPR
Ga0310912_105166732	3300031941	Soil	MARLIVMLSAALMLLSIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0310916_101873311	3300031942	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCM
Ga0310916_102656183	3300031942	Soil	DRTGSQIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDHLQCGSLAKVCNTKNGKCCCMNVSR
Ga0310916_104976301	3300031942	Soil	CLGGEGSQIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSR
Ga0310913_100399581	3300031945	Soil	IGGEGSQIMRMLIVMLSAALMLLSILPQAGAAKSHLKCGGDNLQCGSLVKVCNLRNGKCCCMNVPEPR
Ga0310913_103192623	3300031945	Soil	AALMLLSIAPQAGAAKSHLKCGGDHLQCGSLAKVCNTKNGKCCCMNVSR
Ga0306926_101925974	3300031954	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNQRNGKCCCMDVPR
Ga0318530_100586491	3300031959	Soil	AYRTECGEWSDDQGLKGKKGSQIMRMLIVTLSAALMLLSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0307479_107121402	3300031962	Hardwood Forest Soil	MRMLIVALSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMDVSP
Ga0318531_100358614	3300031981	Soil	AYRMECGGWSDDQGLKGKKGSQIMRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318506_100037286	3300032052	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318524_103820971	3300032067	Soil	GGEGGQIMRMLIVMLSAALMLLSILPQAGAAKSHLKCGGDNLQCGSLVKVCNLRNGKCCCMNVPEPR
Ga0318553_104749691	3300032068	Soil	LKGKKGSQIMRMLIVTLSAALMLLSIPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0306924_1003067513	3300032076	Soil	MRMLIVMLSAALMLLSILPQAGAAKSHLKCGGDNLQCGSLVKVCNLRNGK
Ga0306924_118692891	3300032076	Soil	IAGEGSQIMRMLIVTLSAALMLLSNAPQAGAAKSQFKCGGDNLQCGNLAKVCNPKNGKCCCMNVQQ
Ga0318518_107171431	3300032090	Soil	AYRMECGEWSDDQGLKGKKGSQIMRMLIVTLSAALMLLSTPPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0318540_104187951	3300032094	Soil	PGEGSQIMRMLIVTLSATLMLLSIALQAGAAKSQLKCGGDNLQCGNLAKVCNPKNGKCCCMDVPR
Ga0306920_10004780610	3300032261	Soil	MRMLIVTLSAALMLLSNAPQAGAAKSHYKCGGDNLQCGSLAKVCNMRNGKCCCMNVSQ
Ga0306920_1000541787	3300032261	Soil	MRMLIVTLSAALMLLSIAPQAGAAKSQLKCGGDDLQCGSLAKVCNPKNGKCCCMNVSR
Ga0306920_1004307295	3300032261	Soil	MRMLIVTLSAAMLLLIAPQAGAAKSQLKCGGDNLQCGSLAKVCNPKNGKCCCMNVPQ
Ga0306920_1008710682	3300032261	Soil	MRMLIVTLSAALMLLSIAPQTGAAKSHFKCGGDNLQCGSLAKVCNLRNGKCCCMNASR
Ga0310914_105284311	3300033289	Soil	HYRGWVRGEGSQIMRMLIVTLSAALMLLSIAPQAGAAKSHLKCGGDNLQCGSLAKVCNQRNGKCCCMDVPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039271

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences