NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F039237

Metagenome / Metatranscriptome Family F039237

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F039237
Family Type Metagenome / Metatranscriptome
Number of Sequences 164
Average Sequence Length 39 residues
Representative Sequence MDTNVMIMFASVLCTMTALSFMELRRIRKKLESKPESK
Number of Associated Samples 118
Number of Associated Scaffolds 164

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.10 %
% of genes near scaffold ends (potentially truncated) 23.78 %
% of genes from short scaffolds (< 2000 bps) 67.68 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (67.073 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(15.854 % of family members)
Environment Ontology (ENVO) Unclassified
(37.195 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.244 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 46.97%    β-sheet: 0.00%    Coil/Unstructured: 53.03%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 164 Family Scaffolds
PF00535Glycos_transf_2 10.98
PF00092VWA 4.27
PF01425Amidase 3.05
PF13519VWA_2 2.44
PF04011LemA 1.83
PF13432TPR_16 1.83
PF15780ASH 1.83
PF07238PilZ 1.83
PF03352Adenine_glyco 1.83
PF11645PDDEXK_5 1.22
PF13649Methyltransf_25 1.22
PF14559TPR_19 1.22
PF13847Methyltransf_31 1.22
PF00196GerE 1.22
PF02350Epimerase_2 0.61
PF00378ECH_1 0.61
PF02780Transketolase_C 0.61
PF01565FAD_binding_4 0.61
PF09972DUF2207 0.61
PF13414TPR_11 0.61
PF13668Ferritin_2 0.61
PF13533Biotin_lipoyl_2 0.61
PF10282Lactonase 0.61
PF12704MacB_PCD 0.61
PF02687FtsX 0.61
PF02308MgtC 0.61
PF05065Phage_capsid 0.61
PF02254TrkA_N 0.61
PF01791DeoC 0.61
PF02954HTH_8 0.61
PF028262-Hacid_dh_C 0.61
PF00764Arginosuc_synth 0.61
PF13620CarboxypepD_reg 0.61
PF00696AA_kinase 0.61
PF05598DUF772 0.61
PF01523PmbA_TldD 0.61
PF01979Amidohydro_1 0.61
PF02635DrsE 0.61
PF00501AMP-binding 0.61
PF08861DUF1828 0.61
PF13088BNR_2 0.61
PF10861DUF2784 0.61
PF00861Ribosomal_L18p 0.61
PF02585PIG-L 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 164 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 3.05
COG1704Magnetosome formation protein MamQ, lipoprotein antigen LemA familyCell wall/membrane/envelope biogenesis [M] 1.83
COG28183-methyladenine DNA glycosylase TagReplication, recombination and repair [L] 1.83
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.61
COG0256Ribosomal protein L18Translation, ribosomal structure and biogenesis [J] 0.61
COG0312Zn-dependent protease PmbA/TldA or its inactivated homologGeneral function prediction only [R] 0.61
COG0381UDP-N-acetylglucosamine 2-epimeraseCell wall/membrane/envelope biogenesis [M] 0.61
COG0707UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferaseCell wall/membrane/envelope biogenesis [M] 0.61
COG1285Magnesium uptake protein YhiD/SapB, involved in acid resistanceInorganic ion transport and metabolism [P] 0.61
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 0.61
COG3174Membrane component of predicted Mg2+ transport system, contains DUF4010 domainInorganic ion transport and metabolism [P] 0.61
COG4653Predicted phage phi-C31 gp36 major capsid-like proteinMobilome: prophages, transposons [X] 0.61


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms67.07 %
UnclassifiedrootN/A32.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c1016785All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1011Open in IMG/M
3300000546|LJNas_1000412All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7562Open in IMG/M
3300000567|JGI12270J11330_10035976All Organisms → cellular organisms → Bacteria2831Open in IMG/M
3300001593|JGI12635J15846_10153540All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1576Open in IMG/M
3300002907|JGI25613J43889_10075440All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300002917|JGI25616J43925_10012040All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3803Open in IMG/M
3300004080|Ga0062385_10088522Not Available1466Open in IMG/M
3300004092|Ga0062389_100102159Not Available2542Open in IMG/M
3300004092|Ga0062389_100553680Not Available1307Open in IMG/M
3300004092|Ga0062389_103653984Not Available577Open in IMG/M
3300004092|Ga0062389_103885211All Organisms → cellular organisms → Bacteria → Acidobacteria561Open in IMG/M
3300004121|Ga0058882_1636402Not Available581Open in IMG/M
3300004139|Ga0058897_10663211Not Available1289Open in IMG/M
3300004140|Ga0058894_1474283All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300004152|Ga0062386_100576107Not Available918Open in IMG/M
3300005534|Ga0070735_10045531All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2937Open in IMG/M
3300005541|Ga0070733_10061833All Organisms → cellular organisms → Bacteria2351Open in IMG/M
3300005556|Ga0066707_10054727All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2326Open in IMG/M
3300005591|Ga0070761_10000045All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae86756Open in IMG/M
3300005602|Ga0070762_10092876All Organisms → cellular organisms → Bacteria1734Open in IMG/M
3300005602|Ga0070762_10101795All Organisms → cellular organisms → Bacteria1664Open in IMG/M
3300005712|Ga0070764_10002716All Organisms → cellular organisms → Bacteria8053Open in IMG/M
3300005712|Ga0070764_10169872All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300005712|Ga0070764_10469076All Organisms → cellular organisms → Bacteria → Acidobacteria753Open in IMG/M
3300005712|Ga0070764_10954122Not Available539Open in IMG/M
3300006028|Ga0070717_10066110All Organisms → cellular organisms → Bacteria3007Open in IMG/M
3300006028|Ga0070717_10181805Not Available1833Open in IMG/M
3300006052|Ga0075029_100287706All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300006102|Ga0075015_100079202All Organisms → cellular organisms → Bacteria → Acidobacteria1616Open in IMG/M
3300006176|Ga0070765_100000305All Organisms → cellular organisms → Bacteria29348Open in IMG/M
3300006176|Ga0070765_100077645All Organisms → cellular organisms → Bacteria2806Open in IMG/M
3300006176|Ga0070765_100123021All Organisms → cellular organisms → Bacteria2278Open in IMG/M
3300006176|Ga0070765_100455666Not Available1199Open in IMG/M
3300006176|Ga0070765_100570528All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1066Open in IMG/M
3300009038|Ga0099829_10829580All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300009088|Ga0099830_11327879All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300009089|Ga0099828_10541514Not Available1049Open in IMG/M
3300009143|Ga0099792_10547458All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300009665|Ga0116135_1050864All Organisms → cellular organisms → Bacteria → Acidobacteria1440Open in IMG/M
3300010339|Ga0074046_10000016All Organisms → cellular organisms → Bacteria160573Open in IMG/M
3300010339|Ga0074046_10006699All Organisms → cellular organisms → Bacteria9011Open in IMG/M
3300010339|Ga0074046_10029946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3721Open in IMG/M
3300010339|Ga0074046_10089162All Organisms → cellular organisms → Bacteria1997Open in IMG/M
3300010339|Ga0074046_10428384All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300010341|Ga0074045_10130977All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1715Open in IMG/M
3300010341|Ga0074045_10889108All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300010343|Ga0074044_10478771All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae814Open in IMG/M
3300010379|Ga0136449_100639607Not Available1801Open in IMG/M
3300010859|Ga0126352_1128247All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300010860|Ga0126351_1222776Not Available857Open in IMG/M
3300011120|Ga0150983_13563915Not Available551Open in IMG/M
3300011120|Ga0150983_15466358All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300011269|Ga0137392_10051798All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3091Open in IMG/M
3300011270|Ga0137391_10167988All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1912Open in IMG/M
3300011271|Ga0137393_11130113Not Available666Open in IMG/M
3300011271|Ga0137393_11663822Not Available527Open in IMG/M
3300012096|Ga0137389_10822392Not Available798Open in IMG/M
3300012096|Ga0137389_11491161Not Available572Open in IMG/M
3300012202|Ga0137363_10059734All Organisms → cellular organisms → Bacteria2765Open in IMG/M
3300012202|Ga0137363_10821554All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300012211|Ga0137377_10568191All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1072Open in IMG/M
3300012683|Ga0137398_10036968Not Available2814Open in IMG/M
3300012683|Ga0137398_10576580Not Available777Open in IMG/M
3300012683|Ga0137398_10712546All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300012917|Ga0137395_10132537Not Available1691Open in IMG/M
3300012923|Ga0137359_10952658Not Available738Open in IMG/M
3300014169|Ga0181531_10007376All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6419Open in IMG/M
3300014501|Ga0182024_10124081All Organisms → cellular organisms → Bacteria3686Open in IMG/M
3300014654|Ga0181525_10311422All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300015054|Ga0137420_1491509All Organisms → cellular organisms → Bacteria6060Open in IMG/M
3300016750|Ga0181505_10424572Not Available1271Open in IMG/M
3300017822|Ga0187802_10104593All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1066Open in IMG/M
3300017823|Ga0187818_10000987All Organisms → cellular organisms → Bacteria11077Open in IMG/M
3300017931|Ga0187877_1273525All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300017933|Ga0187801_10226724Not Available746Open in IMG/M
3300017934|Ga0187803_10000606All Organisms → cellular organisms → Bacteria14220Open in IMG/M
3300017934|Ga0187803_10080423All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300017948|Ga0187847_10004118All Organisms → cellular organisms → Bacteria → Acidobacteria10790Open in IMG/M
3300017959|Ga0187779_11150667Not Available544Open in IMG/M
3300017972|Ga0187781_10083620All Organisms → cellular organisms → Bacteria → Acidobacteria2206Open in IMG/M
3300017975|Ga0187782_10371492All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300017999|Ga0187767_10279466Not Available561Open in IMG/M
3300018007|Ga0187805_10091291All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300018034|Ga0187863_10325977Not Available854Open in IMG/M
3300018038|Ga0187855_10697032All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300018042|Ga0187871_10043509All Organisms → cellular organisms → Bacteria → Acidobacteria2738Open in IMG/M
3300018085|Ga0187772_10100835All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300018088|Ga0187771_10051848All Organisms → cellular organisms → Bacteria → Acidobacteria3199Open in IMG/M
3300018088|Ga0187771_10121957All Organisms → cellular organisms → Bacteria2120Open in IMG/M
3300018088|Ga0187771_11851644All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300018090|Ga0187770_11626233All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300019260|Ga0181506_1402028All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300019284|Ga0187797_1809074All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300019284|Ga0187797_1829772All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300020579|Ga0210407_10247953All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1387Open in IMG/M
3300020579|Ga0210407_10419961All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300020579|Ga0210407_10544361All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium906Open in IMG/M
3300020580|Ga0210403_10002138All Organisms → cellular organisms → Bacteria18190Open in IMG/M
3300020580|Ga0210403_10012425All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6891Open in IMG/M
3300020581|Ga0210399_10029280All Organisms → cellular organisms → Bacteria4395Open in IMG/M
3300020582|Ga0210395_11298009Not Available533Open in IMG/M
3300020583|Ga0210401_10021892All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6121Open in IMG/M
3300021088|Ga0210404_10853127All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300021168|Ga0210406_10000783All Organisms → cellular organisms → Bacteria → Acidobacteria41702Open in IMG/M
3300021171|Ga0210405_10000310All Organisms → cellular organisms → Bacteria68334Open in IMG/M
3300021181|Ga0210388_11305784Not Available612Open in IMG/M
3300021401|Ga0210393_10742850Not Available800Open in IMG/M
3300021402|Ga0210385_10247851All Organisms → cellular organisms → Bacteria1308Open in IMG/M
3300021407|Ga0210383_11414361Not Available578Open in IMG/M
3300021420|Ga0210394_10892214Not Available774Open in IMG/M
3300021420|Ga0210394_11205892All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300021432|Ga0210384_10527573All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1062Open in IMG/M
3300021474|Ga0210390_10123134All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae2174Open in IMG/M
3300021478|Ga0210402_10120764All Organisms → cellular organisms → Bacteria2369Open in IMG/M
3300021559|Ga0210409_11526953All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium544Open in IMG/M
3300021861|Ga0213853_10444313All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300022499|Ga0242641_1041831Not Available534Open in IMG/M
3300022532|Ga0242655_10026143All Organisms → cellular organisms → Bacteria1295Open in IMG/M
3300022532|Ga0242655_10294227All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300024227|Ga0228598_1026705All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300025939|Ga0207665_10675886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium811Open in IMG/M
3300026320|Ga0209131_1167682All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300026551|Ga0209648_10105044All Organisms → cellular organisms → Bacteria2307Open in IMG/M
3300027439|Ga0209332_1000339All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae11418Open in IMG/M
3300027545|Ga0209008_1017085Not Available1701Open in IMG/M
3300027583|Ga0209527_1007289All Organisms → cellular organisms → Bacteria2302Open in IMG/M
3300027701|Ga0209447_10032027Not Available1465Open in IMG/M
3300027783|Ga0209448_10135839All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium822Open in IMG/M
3300027803|Ga0209910_10027822Not Available590Open in IMG/M
3300027829|Ga0209773_10236038Not Available764Open in IMG/M
3300027853|Ga0209274_10000352All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae30471Open in IMG/M
3300027854|Ga0209517_10063959All Organisms → cellular organisms → Bacteria2660Open in IMG/M
3300027869|Ga0209579_10477459Not Available677Open in IMG/M
3300027879|Ga0209169_10007065All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6430Open in IMG/M
3300027879|Ga0209169_10624368Not Available562Open in IMG/M
3300027898|Ga0209067_10052691All Organisms → cellular organisms → Bacteria2077Open in IMG/M
3300027908|Ga0209006_11481140Not Available515Open in IMG/M
3300027986|Ga0209168_10131227Not Available1278Open in IMG/M
3300028906|Ga0308309_10000600All Organisms → cellular organisms → Bacteria22596Open in IMG/M
3300028906|Ga0308309_10962987Not Available740Open in IMG/M
3300028906|Ga0308309_11880208Not Available505Open in IMG/M
3300030528|Ga0210277_10752327Not Available766Open in IMG/M
3300030598|Ga0210287_1122410All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300030688|Ga0311345_10712525Not Available805Open in IMG/M
3300031057|Ga0170834_102985487Not Available856Open in IMG/M
3300031708|Ga0310686_103734530Not Available635Open in IMG/M
3300031708|Ga0310686_104674283All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300031708|Ga0310686_109156106All Organisms → cellular organisms → Bacteria13485Open in IMG/M
3300031708|Ga0310686_113743447Not Available1385Open in IMG/M
3300031708|Ga0310686_117207515All Organisms → cellular organisms → Bacteria10136Open in IMG/M
3300031708|Ga0310686_118414104All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300031715|Ga0307476_10000131All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae74574Open in IMG/M
3300031715|Ga0307476_10300948Not Available1176Open in IMG/M
3300031715|Ga0307476_11027358Not Available606Open in IMG/M
3300031754|Ga0307475_10070780All Organisms → cellular organisms → Bacteria2666Open in IMG/M
3300031754|Ga0307475_10414907Not Available1082Open in IMG/M
3300032180|Ga0307471_101390904Not Available862Open in IMG/M
3300032515|Ga0348332_11139122Not Available802Open in IMG/M
3300032515|Ga0348332_13122933All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300032805|Ga0335078_10011012All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae13398Open in IMG/M
3300032805|Ga0335078_11014790Not Available981Open in IMG/M
3300033402|Ga0326728_10000688All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae129044Open in IMG/M
3300033402|Ga0326728_10003361All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae50007Open in IMG/M
3300034163|Ga0370515_0001544All Organisms → cellular organisms → Bacteria11539Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.85%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.59%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil10.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.10%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil5.49%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.49%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.27%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil4.88%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.66%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.66%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.44%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.83%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.83%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.22%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.22%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.22%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.22%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.22%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.22%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.61%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.61%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.61%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.61%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.61%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.61%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.61%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.61%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.61%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000546Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004121Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004140Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010859Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019260Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022499Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027803Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3SEnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030528Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030598Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_101678532228664022SoilMDTIVLIMFASVISTMTALSFIELRRIRKKLESKAEVAPA
LJNas_100041293300000546Quercus RhizosphereMDIIVMIMFGSVLCTMTALNFMELRRIRKKLEADQKNAK*
JGI12270J11330_1003597623300000567Peatlands SoilMDSIVMIMFGSVLCTMTALSFMELRKIRKKLETKQP*
JGI12635J15846_1015354013300001593Forest SoilMDTIVTTIFGSAPCTMTALTFIELRRIRKNLKSKGLSHCFEN
JGI25613J43889_1007544023300002907Grasslands SoilMDTSVMIMFASVLCTMTALNFMELRRIRKKLESKPESKPESK*
JGI25616J43925_1001204023300002917Grasslands SoilMDTGVMIMFASVLCTMTALNFMELRRIRKRLEAKPEAKPEAK*
Ga0062385_1008852223300004080Bog Forest SoilMDAKVMIMFASVICTMTALSFMELRRIRKKLESNTESKPESRAESK*
Ga0062389_10010215953300004092Bog Forest SoilMDTSVMILFASVLCTTTALSFMELRRIRKKLESKSESKPESK*
Ga0062389_10055368023300004092Bog Forest SoilMDTILMISFGSLLCAMTALSFMELRRIRKKMETKAGEPASK*
Ga0062389_10365398413300004092Bog Forest SoilMDAKVMIMFASVLCTMTALSFMELRRIRKRLESKLEPKAESKVESK*
Ga0062389_10388521113300004092Bog Forest SoilAPMDTIVMIMFASVICTTTALSFMELRRIRKKLESKDSK*
Ga0058882_163640213300004121Forest SoilMDAKVMIMFASVICTMTALSFMELRRIRKKLESNLESKPESRAESK*
Ga0058897_1066321123300004139Forest SoilMDISVMIMFASVLCTMTALCFMELRRIRKKLEGKPEAKVESK*
Ga0058894_147428323300004140Forest SoilGARAMDVNVMIMFASVLCTMTALSFMELRRIRKKLEAKPESKPEAK*
Ga0062386_10057610713300004152Bog Forest SoilMDTIVMIMFASVLCTMTALSFIELRRIRKRLETKPDSKAESK*
Ga0070735_1004553113300005534Surface SoilMDFRVMILFASVIATMTGLNFIELRRIRKNLERNQPKG*
Ga0070733_1006183323300005541Surface SoilMDSIVMIMFGSVLCTMTALNFMELRKIRKKLETKQS*
Ga0066707_1005472713300005556SoilMDTIVIIMFGSVLCSVTALSFIELRRIRKKLESNS
Ga0070761_10000045763300005591SoilMDTNVMIMFASVLCTMTALSFMELRRIRKRLEAKPEPKPEPKPEPK*
Ga0070762_1009287633300005602SoilMDSIVMIMFGSVLCTMTALNFIELRRIRKKLETKQS*
Ga0070762_1010179513300005602SoilMDTILMISFGSVLCAMTALSFMELRRIRKRMETKAGEPGSK*
Ga0070764_1000271673300005712SoilMDSIVMIMFGSLLCTMTALNFVELRRIRKKLDTKQS*
Ga0070764_1016987223300005712SoilMDSIVMIMFGSLLCTMTALNFMELRKIRKKLEAKQS*
Ga0070764_1046907613300005712SoilMDAKVMIMFASVLCTMTALSFMELRRIRKRLESKTESKPESK*
Ga0070764_1095412213300005712SoilASMDSIVMIMFGSVLCTMTALNFMELRRIRKKLETKQS*
Ga0070717_1006611023300006028Corn, Switchgrass And Miscanthus RhizosphereMDTSVIIMFASVLCTMTALNFMELRRIRKKLEAKPESKVESK*
Ga0070717_1018180513300006028Corn, Switchgrass And Miscanthus RhizosphereMIIMISFGSVMCAMTALSFIELRRIRKKLESKERN*
Ga0075029_10028770623300006052WatershedsMDTIVWIMFGSVLCTMTALNFIEIRRIRKKLDSKQ*
Ga0075015_10007920243300006102WatershedsMDAIVYIMFGSVLCTMTALNFMELRRIRKKLDSKQ*
Ga0070765_100000305273300006176SoilMDTNVMIMFASVLCTMTALSFMELRRIRKKLESKPESK*
Ga0070765_10007764523300006176SoilMDSIVMILFGSVLCTTSALTFMEIRRIRKKLEAK*
Ga0070765_10012302123300006176SoilMDSIVMIMFGSVLCTMTALNFMELRRIRKKLETKQS*
Ga0070765_10045566633300006176SoilMDAKVMIMFASVLCTMTALSFMELRRIRKRLESKPESKPESK*
Ga0070765_10057052833300006176SoilMDTNVMIMFASVLCTMTALSFMELRRIRKKLEAKPETKVESK*
Ga0099829_1082958013300009038Vadose Zone SoilMETIVMISFGSVLCAMTALSFIELRRIRKKLESK*
Ga0099830_1132787923300009088Vadose Zone SoilRSPRPMETIVMISFGSVLCAMTALSFIELRRIRKKLESK*
Ga0099828_1054151423300009089Vadose Zone SoilMIMFASVLCTMTALNFMELRRIRKKLEGKPESKPESK*
Ga0099792_1054745823300009143Vadose Zone SoilMIMFASVLCTMTALNFMELRRIRKKLESKPESKPESK*
Ga0116135_105086413300009665PeatlandMDMNVIIMFASVLCTMTALSFMELRRIRKKLEAKPASKPEPK*
Ga0074046_10000016473300010339Bog Forest SoilMIFMISFGSVLCATTALCFMELRRIRKKLESKLEPK*
Ga0074046_10006699103300010339Bog Forest SoilMDIIVFIMFGSVLCTVTALNFMELRRIRKKLESKPQS*
Ga0074046_1002994633300010339Bog Forest SoilMDTIMMISFGSVLCAVTALNFIELRRIRKKLESNSASK*
Ga0074046_1008916223300010339Bog Forest SoilMDMIILISFGSVLCAMTALSFMELRRIRKKMESK*
Ga0074046_1042838413300010339Bog Forest SoilMDVIVYIMFGSVICTMTALSFMELRRIRKKLESKPKS
Ga0074045_1013097723300010341Bog Forest SoilMDMILLISFGSVLCAMTALSFMELRRIRKKMESK*
Ga0074045_1088910823300010341Bog Forest SoilMDTIVMIMFASVICTTTALSFMELRRIRKKLESKDSK*
Ga0074044_1047877123300010343Bog Forest SoilMDSIMMILFGSVLCTTSALAFMELRRIRKKLEAK*
Ga0136449_10063960713300010379Peatlands SoilMETIVMISFGSVLCSMTALSFIELRRIRKKLESK*
Ga0126352_112824713300010859Boreal Forest SoilAHSMDANVMIMFASVLCTMTALSFMELRRIRKKLESKPEPKVESK*
Ga0126351_122277613300010860Boreal Forest SoilHSMDANVMIMFASVLCTMTALSFMELRRIRKKLESKPEPKVESK*
Ga0150983_1356391523300011120Forest SoilMMILFGSVLSAMTALSFIELRRIRKKLESKEANSK*
Ga0150983_1546635813300011120Forest SoilGARAMDVNVMIMFASVLCTMTALSFMELRRIRKKLEAKPESKPESK*
Ga0137392_1005179823300011269Vadose Zone SoilMIMFASVLCTMTALNFMELRRIRKKLEGKPDAKPEAK*
Ga0137391_1016798843300011270Vadose Zone SoilMEAIVMISFGSVLCAMTALSFIELRRIRKKLESK*
Ga0137393_1113011323300011271Vadose Zone SoilMDIIVMISFGSVLCAMSALNFIELRRIRKKLESK*
Ga0137393_1166382213300011271Vadose Zone SoilMETIVMISFGSVLCAMTALSFIELRRIRKKLESN*
Ga0137389_1082239213300012096Vadose Zone SoilGRSPRPMETIVMISFGSVLCAMTALSFIELRRIRKKLESK*
Ga0137389_1149116113300012096Vadose Zone SoilMDIIVMISFGSVLCAMSALNFIELRRIRKKLESN*
Ga0137363_1005973433300012202Vadose Zone SoilMDTGVMIMFASVLCTMTALNFMELRRIRKKLEAKPEAKPEAK*
Ga0137363_1082155423300012202Vadose Zone SoilMIMFASVLCTMTALNFMELRRIRKKLEAKPESKPESK*
Ga0137377_1056819123300012211Vadose Zone SoilMETIVMISFGSVLCAMTALSFIELRRIRKKLESR*
Ga0137398_1003696833300012683Vadose Zone SoilMIIMISFGSVMCAMTALSFIELRRIRKKMESKEKN*
Ga0137398_1057658023300012683Vadose Zone SoilLILDMIIMISFGSVMCAMTALSFIELRRIRKKLESKERI*
Ga0137398_1071254623300012683Vadose Zone SoilMDIIVIIMFGSVLCSVTALNFMELRRIRKKLESK*
Ga0137395_1013253713300012917Vadose Zone SoilMIIMISFASVMCAMTALSFIELRRIRKKLESKERN*
Ga0137359_1095265813300012923Vadose Zone SoilMDTSVMIMFASVLCTMTALNFMELRRIRKKLEAKPESKPESK*
Ga0181531_1000737633300014169BogMDTNVMIMFASVLCTMTALSFMELRRIRKKLEAKPEVKTESK*
Ga0182024_1012408123300014501PermafrostMDTIVMIMFGSVLCSVTGLCFMELRRIRKKLESK*
Ga0181525_1031142223300014654BogMDTNVMIMFASVLCTMTALSFMELRRIRKKLEAKPESKPEAK*
Ga0137420_1491509103300015054Vadose Zone SoilMIMFASVLCTMTALSFMELRRIRKSLESKPQAKPESK*
Ga0181505_1042457233300016750PeatlandMDAKVMIMFASVICTMTALSFMELRRIRKRLESKLESKPESK
Ga0187802_1010459323300017822Freshwater SedimentMDTILMVSFGSVLCAMTALSFMELRRIRKKLGSKPAEPSSR
Ga0187818_1000098793300017823Freshwater SedimentMDTIVMISFGSVLCAMTALSFMELRRIRKKLESKVKELDSK
Ga0187877_127352513300017931PeatlandPMDTILMISFGSGLCAMTALCFIELRRIRKKLESK
Ga0187801_1022672413300017933Freshwater SedimentMDSTVMIMFGSVLCTMSGLIFMELRKIRKRLEKAPNPSS
Ga0187803_10000606113300017934Freshwater SedimentMDTIVMISFGSVLCAMTALSFMELRRIRKKLEPKTAEPSSK
Ga0187803_1008042323300017934Freshwater SedimentMDMIVFIMFGSVLCTMTALSFMELRRIRKKLESKPKS
Ga0187847_10004118133300017948PeatlandMDTIVLISFGSVVCAMTALCFMELRRIRKKLESKPQPK
Ga0187779_1115066713300017959Tropical PeatlandMDTIVMIMFASVLCTMTALNFIELRRIRKKLDRSGAPPTSPKN
Ga0187781_1008362013300017972Tropical PeatlandMDSIVLIMFGSVLCTMTALNFMELRRIRKKLESKPQS
Ga0187782_1037149213300017975Tropical PeatlandMDTIVFIMFASVLCTVTALNFMELRRIRKKLDSKPQS
Ga0187767_1027946613300017999Tropical PeatlandMDNILMILFGSLLCTMTSLNFIELRRIRKKLDTKPSA
Ga0187805_1009129123300018007Freshwater SedimentMDTIIWIMFASVLCTMTALNFIEVRRIRKKLESKQ
Ga0187863_1032597723300018034PeatlandMDSILMIMFGSVLCTMTALTFMEARRIRKKLESKQQ
Ga0187855_1069703213300018038PeatlandMDSIVMIMFGSLLCTMTALNFMELRKIRKKLEAKQS
Ga0187871_1004350933300018042PeatlandDSIVMIMFGSLLCTMTALNFMELRKIRKKLEAKQS
Ga0187772_1010083533300018085Tropical PeatlandMDSIVMIMFGSVLCTMTALNFMELRRIRKKLESKPQS
Ga0187771_1005184843300018088Tropical PeatlandMDTNLFIVFASLLCAVTALNFMELRRIRKKLESKQKPDSKQ
Ga0187771_1012195723300018088Tropical PeatlandMDTIVFIMFGSVLCTMTALNFMELRRIRKKLESKPQS
Ga0187771_1185164423300018088Tropical PeatlandMDTNLFIVFASLLCAVTALNFMELRRIRKKLESKQKLDSNQ
Ga0187770_1162623323300018090Tropical PeatlandMDAIVFIMFGSVLCTVMALNFMELRRIRKKLESKP
Ga0181506_140202813300019260PeatlandPMDTNVTIMFASVLCTMTALSFMELRRIRKKLEAKPEVKTESK
Ga0187797_180907423300019284PeatlandSTRRKACTMDSIVMIMFGSVLCTMTALNFMELRRIRKKLESKPQS
Ga0187797_182977213300019284PeatlandIRLGEVTSTGRKACTMDSIVLIMFGSVLCTMTALNFMELRRIRKKLESKPQS
Ga0210407_1024795333300020579SoilMDTSVMIMFASVLCTVSALNFMELRRIRKKLEAKPESKPEPK
Ga0210407_1041996113300020579SoilVMIMFASVLCTVSALNFMELRRIRKKLEAKPESKPEPK
Ga0210407_1054436133300020579SoilMDAKVMIMFASVLCTMTALSFMELRRIRKRLESKTESKPESK
Ga0210403_1000213883300020580SoilMDMNVMIMFASVLCTITALSFMELRKIRKRLEVKPESKPESK
Ga0210403_1001242523300020580SoilMDSIVMIMFGSVLCTMTALNFIELRRIRKKLETKQS
Ga0210399_1002928033300020581SoilMDTNVMIMFASVLCTMTALCFMELRRIRKKLEAKPEVKVELK
Ga0210395_1129800913300020582SoilMDNIVLIMFGSVLCAMTALCFMELRRIRKKLESTVK
Ga0210401_1002189263300020583SoilMDSIVMIMFGSVLCTMTALNFMELRKIRKKLETKQS
Ga0210404_1085312723300021088SoilMDAKVMIMFASVLCTMTALSFMELRRIRKRLESKPESKPESK
Ga0210406_1000078313300021168SoilMDSIVIIMFGSVLCTMTALNFIELRRIRKKLETKQS
Ga0210405_10000310273300021171SoilMDISVMIMFASVLCTMTALCFMELRRIRKKLEGKPEAKVESK
Ga0210388_1130578423300021181SoilGGLRTMDSIVMILFGSVLCTTSALTFMEIRRIRKKLEAK
Ga0210393_1074285013300021401SoilMDTIVMIMFASVICTMTALSFMELRRIRKRLESPKLEPKAESK
Ga0210385_1024785133300021402SoilMDTILMISFGSVLCAMTALSFMELRRIRKRMETKAGEPGSK
Ga0210383_1141436123300021407SoilMDAKVMIMFASVLCTMTALSFMELRRIRKRLESKS
Ga0210394_1089221423300021420SoilHVVGAATLDTIVMIMFASVICTMTALSFMELRRIRKRLESPKLEPKAESK
Ga0210394_1120589223300021420SoilMDMNVLIMFASVLCTMTALSFMELRKIRKQLEAKPQSKPETK
Ga0210384_1052757323300021432SoilMDINVMIMFASVLCTMTALSFMELRKIRKQLEAKPESKPESK
Ga0210390_1012313413300021474SoilTMDAKVMIMFASVICTMTALSFMELRRIRKKLESNLESKPESRAESK
Ga0210402_1012076423300021478SoilMDSIVMIMFGSVLCTVTALNFMELRRIRKKLEAKQS
Ga0210409_1152695313300021559SoilMDTSVMIMFASVLCTVSALNFMELRRIRKKLEAKPESKPEP
Ga0213853_1044431323300021861WatershedsACKMDTIVWIMFASVLCTMTALNFIELRRIRKKLESKQ
Ga0242641_104183123300022499SoilMDAKVMIMFASVLCTMTALSFMELRRIRKWLESNLAPKAESKAESK
Ga0242655_1002614313300022532SoilPTSMDMNVMIMFASVLCTITALSFMELRKIRKRLEVKPESKPESK
Ga0242655_1029422713300022532SoilPSMDTSVMIMFASVLCTVSALNFMELRRIRKKLEAKPESKPEPK
Ga0228598_102670523300024227RhizospherePTSMDTNVMIMFASVLCTMTALSFMELRKIRKRLEAKPESKPESK
Ga0207665_1067588633300025939Corn, Switchgrass And Miscanthus RhizosphereMDSILMTMFAAVVATMTALTFVEIRRIRKKLENMQKTA
Ga0209131_116768223300026320Grasslands SoilMDTSVMIMFASVLCTMTALNFMELRRIRKKLESKPESKPESK
Ga0209648_1010504423300026551Grasslands SoilMDTGVMIMFASVLCTMTALNFMELRRIRKRLEAKPEAKPEAK
Ga0209332_1000339123300027439Forest SoilMDTIVLVMFGSVLCTMTALNFMELRRIRKHLESKKSSSPAPAHE
Ga0209008_101708513300027545Forest SoilMDTIVTMMSGSVLCTMTALSFIELRRIRKNLKSKQRKKSAAHE
Ga0209527_100728933300027583Forest SoilMDTIVLVMFGSVLCTMTALNFMELRRIRKNLESKKSTSPAPAQN
Ga0209447_1003202723300027701Bog Forest SoilMDAKVMIMFASVICTMTALSFMELRRIRKKLESNTESKPESRAESK
Ga0209448_1013583923300027783Bog Forest SoilMDTIVMIMFASVICTMTALSFMELRRIRKKLESKDPK
Ga0209910_1002782223300027803Thawing PermafrostMDTNVMIMFASVICTMTALSFMELRRIRKRLEAKPEVKTESK
Ga0209773_1023603813300027829Bog Forest SoilMDSIVMIMFGSLLCTMTALNFMELRRIRKKLETKQS
Ga0209274_1000035243300027853SoilMDTNVMIMFASVLCTMTALSFMELRRIRKRLEAKPEPKPEPKPEPK
Ga0209517_1006395933300027854Peatlands SoilMDSIVMIMFGSVLCTMTALSFMELRKIRKKLETKQP
Ga0209579_1047745923300027869Surface SoilMDNIVMICFASVITTMTALSFMELRRIRRRLEKTNPPIHLSAG
Ga0209169_1000706533300027879SoilMDSIVMIMFGSLLCTMTALNFVELRRIRKKLDTKQS
Ga0209169_1062436813300027879SoilDPASMDSIVMIMFGSVLCTMTALNFMELRRIRKKLETKQS
Ga0209067_1005269143300027898WatershedsMDAIVYIMFGSVLCTMTALNFMELRRIRKKLDSKQ
Ga0209006_1148114013300027908Forest SoilMDTIVMIMFGCVLCTMTALNFIELRRIRKKLETKQS
Ga0209168_1013122723300027986Surface SoilMDFRVMILFASVIATMTGLNFIELRRIRKNLERNQPKG
Ga0308309_1000060063300028906SoilMDTNVMIMFASVLCTMTALSFMELRRIRKKLESKPESK
Ga0308309_1096298723300028906SoilMDSIVMIMFGSVLCTMTALNFMELRRIRKKLETKQS
Ga0308309_1188020813300028906SoilMDTNVMIMFASVLCTMTALSFMELRRIRKKLEAKPETKVESK
Ga0210277_1075232723300030528SoilMIMFASVLCTMTALSFMELRKIRKRLEAKPESKPESK
Ga0210287_112241023300030598SoilMDTIVMIMFGSVLCTMTALSFIELRRIRKKLESRQGN
Ga0311345_1071252523300030688BogMDTIVMISFGSVVSAMTALCFMELRRIRKKLESKPESK
Ga0170834_10298548723300031057Forest SoilMDTIVMIMFGSVLCTMTALSFMELRRIRKKLESKPQPQPESK
Ga0310686_10373453023300031708SoilMDAIVMIMFASVLCTMTALSFMELRRIRKRLESKPESKPESKAEAK
Ga0310686_10467428323300031708SoilMDTNVMIMFASVLCAMTGLCFMELRRIRKKLEMKPAAKVESK
Ga0310686_10915610633300031708SoilMDTNVMIMFASVLCTMTALSFMELRKIRKQLEAKPGPKPESK
Ga0310686_11374344733300031708SoilDTIVMIMFASVICTMTVLSFMELRRIRKRLESPKLEPKAESK
Ga0310686_11720751563300031708SoilMDTNVMIMFASVLCTMTALSFMELRKIRKRLEAKPESKPESK
Ga0310686_11841410423300031708SoilMDMNVMIMFASVLCTITALSFMELRKIRKRLEAKPGSKQESK
Ga0307476_10000131523300031715Hardwood Forest SoilMDAIVMIMFASVLCTMTALSFMELRRIRKKLESKPESKAETK
Ga0307476_1030094823300031715Hardwood Forest SoilMDAIVMIMFASVLCTMTALSFMELRRIRKKLESKPESKAESKAEAK
Ga0307476_1102735823300031715Hardwood Forest SoilMDIIVLVMFGSVLCTMTALNFMELRRIRKNLESKKSTLPAPAQN
Ga0307475_1007078033300031754Hardwood Forest SoilMDTGVMIMFLSVLCTMTALSFMELRRIRKKLETKPEAKQESK
Ga0307475_1041490723300031754Hardwood Forest SoilMDVNVMIMFASVLCTMTALSFMELRRIRKKLEAKPESKPEAK
Ga0307471_10139090413300032180Hardwood Forest SoilMIIMISFGSVMCAMTALSFIELRRIRKKMESKEKS
Ga0348332_1113912213300032515Plant LitterAPMDTNVMIMFASVLCAMTGLCFMELRRIRKKLEMKPAAKVESK
Ga0348332_1312293313300032515Plant LitterPTSMDMNVMIMFASVLCTITALSFMELRKIRKRLEAKPGSKPESK
Ga0335078_1001101233300032805SoilMDSIVMIMFGSVLCTMTALNFMELRRIRKKLEAKQS
Ga0335078_1101479033300032805SoilMDTILMISFGSVLVAMSALSFIELRRIRKKMSTTPSV
Ga0326728_10000688223300033402Peat SoilMDSIVFIMFGSVLCTMTALSFMELRRIRKKLESKPQS
Ga0326728_10003361163300033402Peat SoilMDTIMMISFGSVLCAVTALNFIELRRIRKKLESNSASK
Ga0370515_0001544_3231_33593300034163Untreated Peat SoilMDTNVMIMFASVLCTMTALSFMELRRIRKKLEAKPDSKPETK


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