NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F039223

Metagenome / Metatranscriptome Family F039223

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F039223
Family Type Metagenome / Metatranscriptome
Number of Sequences 164
Average Sequence Length 62 residues
Representative Sequence MAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Number of Associated Samples 124
Number of Associated Scaffolds 164

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.18 %
% of genes near scaffold ends (potentially truncated) 20.73 %
% of genes from short scaffolds (< 2000 bps) 66.46 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (69.512 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(28.658 % of family members)
Environment Ontology (ENVO) Unclassified
(35.976 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.732 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 29.03%    Coil/Unstructured: 70.97%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 164 Family Scaffolds
PF09723Zn-ribbon_8 6.71
PF00296Bac_luciferase 5.49
PF00072Response_reg 3.66
PF09335SNARE_assoc 3.05
PF08734GYD 3.05
PF03150CCP_MauG 2.44
PF08242Methyltransf_12 2.44
PF00199Catalase 1.83
PF00005ABC_tran 1.83
PF01875Memo 1.22
PF04185Phosphoesterase 1.22
PF01594AI-2E_transport 1.22
PF13460NAD_binding_10 1.22
PF01494FAD_binding_3 1.22
PF00589Phage_integrase 1.22
PF00903Glyoxalase 1.22
PF04075F420H2_quin_red 1.22
PF01381HTH_3 0.61
PF04909Amidohydro_2 0.61
PF13520AA_permease_2 0.61
PF08241Methyltransf_11 0.61
PF13531SBP_bac_11 0.61
PF07883Cupin_2 0.61
PF10263SprT-like 0.61
PF10592AIPR 0.61
PF00171Aldedh 0.61
PF02899Phage_int_SAM_1 0.61
PF03928HbpS-like 0.61
PF04734Ceramidase_alk 0.61
PF13185GAF_2 0.61
PF07685GATase_3 0.61
PF03241HpaB 0.61
PF13361UvrD_C 0.61
PF00528BPD_transp_1 0.61
PF00067p450 0.61
PF07929PRiA4_ORF3 0.61
PF11154DUF2934 0.61
PF00174Oxidored_molyb 0.61
PF04055Radical_SAM 0.61
PF03364Polyketide_cyc 0.61
PF13561adh_short_C2 0.61
PF04392ABC_sub_bind 0.61
PF13458Peripla_BP_6 0.61
PF04471Mrr_cat 0.61
PF00582Usp 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 164 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 5.49
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 3.05
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 3.05
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 3.05
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 3.05
COG1858Cytochrome c peroxidasePosttranslational modification, protein turnover, chaperones [O] 2.44
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 2.44
COG0753CatalaseInorganic ion transport and metabolism [P] 1.83
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 1.22
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.22
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 1.22
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 1.22
COG1355Predicted class III extradiol dioxygenase, MEMO1 familyGeneral function prediction only [R] 1.22
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 1.22
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.61
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.61
COG2124Cytochrome P450Defense mechanisms [V] 0.61
COG2368Aromatic ring hydroxylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.61
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.61
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.61
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.61
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.61
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 0.61
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 0.61


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.51 %
UnclassifiedrootN/A30.49 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_101691199All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria836Open in IMG/M
3300002245|JGIcombinedJ26739_101175818All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300003994|Ga0055435_10056702All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium959Open in IMG/M
3300004463|Ga0063356_103946422Not Available639Open in IMG/M
3300004633|Ga0066395_10026096All Organisms → cellular organisms → Bacteria2384Open in IMG/M
3300005294|Ga0065705_10882258All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium582Open in IMG/M
3300005295|Ga0065707_11067144Not Available513Open in IMG/M
3300005332|Ga0066388_102616106All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium919Open in IMG/M
3300005332|Ga0066388_102957306Not Available868Open in IMG/M
3300005444|Ga0070694_101499971All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria571Open in IMG/M
3300005445|Ga0070708_100008316All Organisms → cellular organisms → Bacteria8334Open in IMG/M
3300005445|Ga0070708_100154669All Organisms → cellular organisms → Bacteria2134Open in IMG/M
3300005445|Ga0070708_100441213All Organisms → cellular organisms → Bacteria → Proteobacteria1228Open in IMG/M
3300005445|Ga0070708_100471348All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1184Open in IMG/M
3300005468|Ga0070707_100010066All Organisms → cellular organisms → Bacteria8803Open in IMG/M
3300005468|Ga0070707_101940349All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005518|Ga0070699_101022710All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium758Open in IMG/M
3300005578|Ga0068854_100251301All Organisms → cellular organisms → Bacteria1412Open in IMG/M
3300005578|Ga0068854_100934570All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra764Open in IMG/M
3300005713|Ga0066905_100472027All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1036Open in IMG/M
3300005843|Ga0068860_100339614All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1476Open in IMG/M
3300005921|Ga0070766_10366403All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300006057|Ga0075026_100976955All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria525Open in IMG/M
3300006176|Ga0070765_101391092All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria661Open in IMG/M
3300006845|Ga0075421_100070119All Organisms → cellular organisms → Bacteria4425Open in IMG/M
3300007255|Ga0099791_10118015All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300007255|Ga0099791_10192239All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria960Open in IMG/M
3300009012|Ga0066710_101285768All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300009038|Ga0099829_10004857All Organisms → cellular organisms → Bacteria → Proteobacteria8087Open in IMG/M
3300009038|Ga0099829_10262825All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300009090|Ga0099827_10181711All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1740Open in IMG/M
3300009090|Ga0099827_10713133All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium867Open in IMG/M
3300009147|Ga0114129_10011307All Organisms → cellular organisms → Bacteria12717Open in IMG/M
3300009792|Ga0126374_10633120All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium794Open in IMG/M
3300009792|Ga0126374_10997463Not Available657Open in IMG/M
3300009810|Ga0105088_1034289All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300010043|Ga0126380_10064830All Organisms → cellular organisms → Bacteria2043Open in IMG/M
3300010047|Ga0126382_10716155All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium842Open in IMG/M
3300010358|Ga0126370_11973593Not Available570Open in IMG/M
3300010366|Ga0126379_10054728Not Available3307Open in IMG/M
3300010376|Ga0126381_102532590All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium735Open in IMG/M
3300010391|Ga0136847_10963514All Organisms → cellular organisms → Bacteria2548Open in IMG/M
3300010391|Ga0136847_11410560All Organisms → cellular organisms → Bacteria → Proteobacteria12304Open in IMG/M
3300010391|Ga0136847_11778905Not Available914Open in IMG/M
3300010391|Ga0136847_12208475Not Available854Open in IMG/M
3300010398|Ga0126383_11807830Not Available699Open in IMG/M
3300010399|Ga0134127_10474650All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1256Open in IMG/M
3300011120|Ga0150983_14212062All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1269Open in IMG/M
3300011270|Ga0137391_10007394All Organisms → cellular organisms → Bacteria8619Open in IMG/M
3300012022|Ga0120191_10056888Not Available700Open in IMG/M
3300012096|Ga0137389_11048027All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium699Open in IMG/M
3300012203|Ga0137399_10070839All Organisms → cellular organisms → Bacteria2615Open in IMG/M
3300012203|Ga0137399_11208853All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300012204|Ga0137374_10011567All Organisms → cellular organisms → Bacteria → Proteobacteria10325Open in IMG/M
3300012349|Ga0137387_10804720All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium680Open in IMG/M
3300012351|Ga0137386_11057315Not Available575Open in IMG/M
3300012353|Ga0137367_10247213All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1283Open in IMG/M
3300012355|Ga0137369_10262308All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1300Open in IMG/M
3300012357|Ga0137384_10600847All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300012362|Ga0137361_10680658All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium940Open in IMG/M
3300012363|Ga0137390_10626224All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300012917|Ga0137395_10198990All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1394Open in IMG/M
3300012923|Ga0137359_10609350All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium957Open in IMG/M
3300012929|Ga0137404_10228986All Organisms → cellular organisms → Bacteria1587Open in IMG/M
3300012929|Ga0137404_11148774Not Available713Open in IMG/M
3300012930|Ga0137407_10452389All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300012931|Ga0153915_11063664All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300012931|Ga0153915_13576843Not Available503Open in IMG/M
3300012944|Ga0137410_10066201All Organisms → cellular organisms → Bacteria2609Open in IMG/M
3300012944|Ga0137410_10862709All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium764Open in IMG/M
3300012948|Ga0126375_10285179All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1138Open in IMG/M
3300012971|Ga0126369_10404205All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1404Open in IMG/M
3300014885|Ga0180063_1025031All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1646Open in IMG/M
3300015252|Ga0180075_1102777Not Available511Open in IMG/M
3300015259|Ga0180085_1118914All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium785Open in IMG/M
3300018000|Ga0184604_10024130All Organisms → cellular organisms → Bacteria1479Open in IMG/M
3300018000|Ga0184604_10221569All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium656Open in IMG/M
3300018027|Ga0184605_10119956All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1170Open in IMG/M
3300018028|Ga0184608_10219144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium MP-SAtl-SRR3965592-G1835Open in IMG/M
3300018053|Ga0184626_10134231All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1052Open in IMG/M
3300018056|Ga0184623_10008789All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4336Open in IMG/M
3300018061|Ga0184619_10348790All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium675Open in IMG/M
3300018063|Ga0184637_10034043All Organisms → cellular organisms → Bacteria → Proteobacteria3090Open in IMG/M
3300018076|Ga0184609_10012504All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3202Open in IMG/M
3300018084|Ga0184629_10248379Not Available929Open in IMG/M
3300018084|Ga0184629_10683830All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium518Open in IMG/M
3300018422|Ga0190265_10873332All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300019360|Ga0187894_10047951All Organisms → cellular organisms → Bacteria2537Open in IMG/M
3300019458|Ga0187892_10008881All Organisms → cellular organisms → Bacteria13492Open in IMG/M
3300019458|Ga0187892_10224697All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300019879|Ga0193723_1083294All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium915Open in IMG/M
3300019881|Ga0193707_1050938All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1319Open in IMG/M
3300020579|Ga0210407_10186803All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1608Open in IMG/M
3300020580|Ga0210403_10088450All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2504Open in IMG/M
3300021080|Ga0210382_10415331Not Available596Open in IMG/M
3300021178|Ga0210408_10612422All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300022694|Ga0222623_10158218All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium882Open in IMG/M
3300025324|Ga0209640_11108069All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300025535|Ga0207423_1007221All Organisms → cellular organisms → Bacteria1677Open in IMG/M
3300025885|Ga0207653_10147629Not Available863Open in IMG/M
3300025907|Ga0207645_10021617All Organisms → cellular organisms → Bacteria → Proteobacteria4194Open in IMG/M
3300025910|Ga0207684_10004049All Organisms → cellular organisms → Bacteria14002Open in IMG/M
3300025910|Ga0207684_10052915All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3446Open in IMG/M
3300025922|Ga0207646_10165627All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1995Open in IMG/M
3300025922|Ga0207646_11077897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium708Open in IMG/M
3300025922|Ga0207646_11627010All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300025981|Ga0207640_10266920All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300026320|Ga0209131_1209783All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium883Open in IMG/M
3300026360|Ga0257173_1005644All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300026371|Ga0257179_1020230All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium766Open in IMG/M
3300026371|Ga0257179_1041467All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria585Open in IMG/M
3300026508|Ga0257161_1131658Not Available525Open in IMG/M
3300027277|Ga0209846_1044870All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300027646|Ga0209466_1085192All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300027654|Ga0209799_1153165All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium525Open in IMG/M
3300027727|Ga0209328_10156372All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300027846|Ga0209180_10110788All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1569Open in IMG/M
3300027862|Ga0209701_10080180All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2058Open in IMG/M
3300027882|Ga0209590_10091684All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1798Open in IMG/M
3300027903|Ga0209488_10364813All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300027909|Ga0209382_10489558All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300027915|Ga0209069_10240169All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria939Open in IMG/M
(restricted) 3300028043|Ga0233417_10264034Not Available770Open in IMG/M
3300028828|Ga0307312_10440140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria858Open in IMG/M
3300028828|Ga0307312_10587599All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium737Open in IMG/M
3300028906|Ga0308309_11103306All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300031114|Ga0308187_10217129Not Available678Open in IMG/M
3300031720|Ga0307469_10082242All Organisms → cellular organisms → Bacteria2186Open in IMG/M
3300031740|Ga0307468_100019535All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2950Open in IMG/M
3300031820|Ga0307473_10101389All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1533Open in IMG/M
3300031997|Ga0315278_10630916Not Available1095Open in IMG/M
3300031997|Ga0315278_10863114All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300032180|Ga0307471_101640775All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium798Open in IMG/M
3300032180|Ga0307471_102786966All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300032401|Ga0315275_10820685All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1030Open in IMG/M
3300033417|Ga0214471_10898896Not Available686Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.66%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.15%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.66%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.44%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment2.44%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.44%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.83%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.22%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.22%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.22%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.22%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.22%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.22%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze1.22%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.22%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.61%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.61%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.61%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.61%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025535Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026371Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-BEnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300027277Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10169119913300000956SoilMAKPKPPARPQLRAGDVVVLRQSGEYVEGEIITILADGRFKVRWLTGLAYRDRIATVTIDEIHKKT*
JGI12053J15887_1058937313300001661Forest SoilRQSQEYVEGEIITVLGDGRYKVRWLTGSDYQGRVTTVTTEDVRKKS*
JGIcombinedJ26739_10117581813300002245Forest SoilRAGDVVVLRQSQDAVEGEIIAVLTDGHYKVRWLTGVDYQHRVTTVTTEEIRKKTELGRS*
JGI25617J43924_1036706023300002914Grasslands SoilSQEYVEGEIITVLGDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS*
Ga0055435_1005670213300003994Natural And Restored WetlandsMAKPKSPSPPPSQPRAGDVVVLRQSPEHVEGEIITVLGGGRYRVKWATGVDYRDRITTVTVDEIRKKTS*
Ga0063356_10394642223300004463Arabidopsis Thaliana RhizosphereMAKPKPPARPQLRAGDVVVQRQSGEHVEGEIIAIVADGRYKVRWLTGLAYRDRIATVTIDEIHKKT*
Ga0066395_1002609623300004633Tropical Forest SoilMAKSNSPPPLQPRAGDVVVLHQSQEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTANEIRKKV*
Ga0065705_1088225823300005294Switchgrass RhizospherePRPQLRAGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQSRVTTVATEEVRKK*
Ga0065707_1106714413300005295Switchgrass RhizosphereMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGADYQNRVTTVATEEVRKK*
Ga0066388_10261610633300005332Tropical Forest SoilMAKSKSPPPLQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTANEIRKKV*
Ga0066388_10295730613300005332Tropical Forest SoilMAKPKSPPPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRNRITTVTANEIRKKV*
Ga0066388_10409728023300005332Tropical Forest SoilVLRQSQEYVEGEIITVLMDGRYKVHWLTGSNYQDRVTTVAAEEIRRKI*
Ga0070694_10149997123300005444Corn, Switchgrass And Miscanthus RhizosphereMGKKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQNRVTTVTTEEVRKK*
Ga0070708_10000831693300005445Corn, Switchgrass And Miscanthus RhizosphereMAKPSPPPRPQLRAGDVVVLRQSHEYVEGEIITVLVDGRYKVRWLTGSDFQNRVTTVTTEEVRKKS*
Ga0070708_10015466943300005445Corn, Switchgrass And Miscanthus RhizosphereMAKRKPLPRPQPRAGDVVVLGQSQEYVEGEIITVLGAGRYRVKWATGLDYRDRIATVTVDEIRKKT*
Ga0070708_10044121323300005445Corn, Switchgrass And Miscanthus RhizosphereMAKPKPLPPPRPRAGDVVVLRQGPEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTADEIRKKL*
Ga0070708_10047134843300005445Corn, Switchgrass And Miscanthus RhizosphereMAKRKPPPRPQPRAGDVVVLCQGQEYVEGEIITVLGAGRYRVKWATGIDYRDRITTVTVDEIRKKT*
Ga0070707_10001006613300005468Corn, Switchgrass And Miscanthus RhizosphereMAKPKSPPPPRPQLRAGDVVVLRQSREYVEGEIITVLVDGRYKVHWLTGSNYQNRVTTVITEEVRKKS*
Ga0070707_10194034913300005468Corn, Switchgrass And Miscanthus RhizosphereMAKPKPPARPQLRAGDVVVLRQSGEYVEGEIITILADGRYKVRWLTGLAYRDRIATVTIDEIHKKT*
Ga0070699_10102271013300005518Corn, Switchgrass And Miscanthus RhizosphereLRAGDVAVLRQSQEHVEGEIITVLVDDRYKVRWLTVSDYRNRVSTVATEEIRRKTQLGRC
Ga0068854_10025130123300005578Corn RhizosphereLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGADYQNRVTTVATEEVRKK*
Ga0068854_10093457013300005578Corn RhizosphereLRAGDVVVQRQSGEHVEGEIIAIVADGRYKVRWLTGLAYRDRIATVTIDEIHKKT*
Ga0066905_10047202723300005713Tropical Forest SoilMAKSKSPPPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTANEIRKKV*
Ga0068860_10033961423300005843Switchgrass RhizosphereMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQNRVTTVTTEEVRKK*
Ga0070766_1036640323300005921SoilLAETTRKVLIMARPKPPPPRPQLRAGDVVVLRQSQESVEGEIIAVLQDGRYKVRWLTGSDYQNRVTTVTTEEIRKES*
Ga0070766_1042034123300005921SoilVVVLRQSQDAVEGEIIAVLTDGHYKVRWLTGVDYQHRVTTVTTEEIRKKTELGRS*
Ga0075026_10097695523300006057WatershedsMARPKPPPPRPQLRAGDVVVLRQSQDAVEGEIIAVLTDGHYKVRWLTGVDYQHRVTTVTTEEIRKKTELGRS*
Ga0070765_10139109223300006176SoilMARPKPPPPRPQLRAGDVVVLRQSQESVEGEIIAVLQDGRYKVRWLTGSDYQNRVTTVTTEEIRKES*
Ga0075421_10007011943300006845Populus RhizosphereMAKPSPPPRPQLRAGDVVVLRESQEHVEGEIITVLGDGRYKVRWLTGSDYQSRVTTVTTEEVRKK*
Ga0099791_1011801523300007255Vadose Zone SoilLRAGDVVVLRQSQEYVEGEIITVLVDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS*
Ga0099791_1019223923300007255Vadose Zone SoilLRAGDVVVLRQSPEDVEGEITTVLGDGRYKVHWLTGSTYQDRVTTVTAEEIRRKT*
Ga0099794_1012299713300007265Vadose Zone SoilIAVLMDGRYKVRWLTGADYQNRVTTVTTEEVRKKS*
Ga0066710_10128576833300009012Grasslands SoilMAKRKPLPLPQPRAGDVVVLCQSQEYVEGEITTVLGAGRYRVKWATGADDRDRITT
Ga0099829_1000485733300009038Vadose Zone SoilMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGADHQNRVTTVTTEEVRKK*
Ga0099829_1004041543300009038Vadose Zone SoilVLRQSQEYVEGEIITVLADGRYKVRWLTSNYQNRVTTVTMEEVRKKS*
Ga0099829_1026282523300009038Vadose Zone SoilMAKSSPPPRPQLRAGDVVVLRQSQEYVEGEIITALVDGRYKVRWLTGSDYQNRVTTVTTDEVRKKS*
Ga0099829_1098576623300009038Vadose Zone SoilLRAGDVVVLRQSQEDVEGEVITVLENGRYKVHWLSGSNYQDRVTTVTA
Ga0099830_1179557413300009088Vadose Zone SoilVVVLRQSQEDVEGEIITVLGDGRYKVHWLTGSNYQDRVTTVTAEAIRRKT*
Ga0099828_1059248223300009089Vadose Zone SoilAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGVDHRDRITTVTAEEIRKKL*
Ga0099827_1018171133300009090Vadose Zone SoilLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGSDYQNRVTTVTTEEVRKK*
Ga0099827_1071313313300009090Vadose Zone SoilMAKRKPLPRPQPRAGDVVVLCQSQEYVEGEIITVLGAGRYRVKWATGADYRDRITTVTVDEIRKKT*
Ga0114129_1001130763300009147Populus RhizosphereMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQGRVTTVTTEEVRKK*
Ga0126374_1063312023300009792Tropical Forest SoilMGSIRLQATREGLLMAKSKSPPPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVNYRDRITTVTANEIRKKV*
Ga0126374_1099746313300009792Tropical Forest SoilMGSIRLQATREALLMAKSNSPPPLQPRAGDVVVLHQSQEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTANEIRKKV*
Ga0105088_103428913300009810Groundwater SandMAKPKPPARPLLRAGDLVVLRQSGEYVEGEIITILADGRYKVRWLTGLAYRDRITTVTIDEIHKKT*
Ga0126380_1006483023300010043Tropical Forest SoilMGSIRLQATREGLLMAKSKSPPPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTANEIRKKV*
Ga0126382_1071615513300010047Tropical Forest SoilMGSIRLQATREALLMAKPKSPPPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRD
Ga0126370_1197359313300010358Tropical Forest SoilMGSIRLQATREALLMAKPKSPPPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRNRITTVTANEIRKKV*
Ga0126379_1005472813300010366Tropical Forest SoilMGSIRLQATREALLMAKSNSPPPLQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRNRITTVTANEIRKKV*
Ga0126381_10253259013300010376Tropical Forest SoilMGSIRLQATREGLLMAKSKSPRPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRDR
Ga0136847_1096351423300010391Freshwater SedimentMAKPKPPPPSQPRAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGADHRDRITTVTADEIRKKL*
Ga0136847_1141056013300010391Freshwater SedimentMGPPPQPRAGDVVFLRQSQEYVEGEIITVLGGGRYRVKCETGVGYRDRITTVTTDEIRKKP*
Ga0136847_1177890523300010391Freshwater SedimentMAKPKPLPPPQPRAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGVDHRDRITTVTAEEIRKKL*
Ga0136847_1220847513300010391Freshwater SedimentPRAGDVVFLRQSQEYVEGEIITVLGGGRYRVKWETGVAYRDRITTVTADEIRKKP*
Ga0126383_1180783023300010398Tropical Forest SoilAKPKPPSPLQPRAGDVVVLRQSQQYVEGEIITVLGEGLYRVKWNTGVDYRDRITTVTVAEIRKRT*
Ga0134127_1047465033300010399Terrestrial SoilSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGADHQNRVTTVTTEEVRKK*
Ga0150983_1421206223300011120Forest SoilLRAGDVVVLRQSQDAVEGEIIAVLTDGHYKVRWLTGVDYQHRVTTVTTEEIRKKTELGRS
Ga0137391_1000739433300011270Vadose Zone SoilLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGADHQNRVTTVTTEEVRKK*
Ga0137393_1167330313300011271Vadose Zone SoilLREGQEDVEGEIITVLGDGRYKVHWLTGSNYQDRVTTVTAEEIRRKT*
Ga0120191_1005688823300012022TerrestrialMAKPKPPARPQLRAGDVVVLRQSGECVEGEIITILADGRYQVRWLTGLAYRDRITTVTIDEIHKKT*
Ga0137389_1104802723300012096Vadose Zone SoilMAKSSPPPRPQLRAGDVVVLRQSQEYVEGEIITVLGDGRYKVRWLTGSDFQNRVTTVTTEEVRKKS*
Ga0137363_1054755123300012202Vadose Zone SoilVVLRQSQEEVEGEIITVLGDGRYKVHWLSGSNYQDRVTTVTTEEIHRKT*
Ga0137399_1007083943300012203Vadose Zone SoilLRAGDVVVLRQSQEYVEGEIITVLGDGRYKVRWLTGSDYQGRVTTVTTEDVRKKS*
Ga0137399_1120885323300012203Vadose Zone SoilPPRPQLRAGDVVVLRQSQEYVEGEIITVLVDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS
Ga0137374_10011567103300012204Vadose Zone SoilMAKATPFPRPQPRAGDVVVLRQSQEYVEGEIITVLGAGRYRVKWATGVDYRDRITTVTADEIRKKTLEDS*
Ga0137362_1044697123300012205Vadose Zone SoilLRAGDVVVLRQSQEYVEGEIITVLVDGRYKVHWLTGSNYQNRVTTVTT
Ga0137362_1121771523300012205Vadose Zone SoilVLRQSQEYVEGEIITVLVDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS*
Ga0137387_1080472023300012349Vadose Zone SoilMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGSDYQNRVTTVTTEEVRKK*
Ga0137386_1105731513300012351Vadose Zone SoilMAKRKPLPRPQPRSGDVVVLCQSQEYVEGEITTVLGAGRYRVKWATGADYRDRITTVTVDEIRKKT*
Ga0137367_1024721313300012353Vadose Zone SoilMAKATPFPRPQPRAGDVVVLRQSQEYVEGEIITVLGAGRYRVKWATGVDYRDRITTVTAD
Ga0137369_1026230843300012355Vadose Zone SoilMAKATPFPRPQPRAGDVVVLRQSQEYVEGEIITVLGAGRYKVKWATGVDYRNRITIVTADEIRKK
Ga0137369_1093645323300012355Vadose Zone SoilMLSCSAREEYVEGEIITVLGDGRYKVRWLTGPDYQGRVTTVTTEEVRKKS*
Ga0137384_1060084713300012357Vadose Zone SoilRAGDVVVLRQSQEYVEGEIITLLGGGRYRVKWETGVDHRDRITTVTAEEIRKKQ*
Ga0137361_1068065813300012362Vadose Zone SoilLRAGDVVVLRQSQEEVEGEIITVLGDGRYKVHWLSGSNYQDRVTTVTTEEIHRKT*
Ga0137390_1062622413300012363Vadose Zone SoilMAKRKPLPRPQPRAGDVVVLCQGQEYVEGEIITVLGAGRYRVKWATGADYRDRITTVTVDEIRKKT*
Ga0137390_1195153523300012363Vadose Zone SoilMLRQSQENVEGEIIMVLGAGRYKVRWLTGSEYQNRVTTVTTEEVRKKS*
Ga0137395_1019899023300012917Vadose Zone SoilLRAGDVVVLLHSQEDVEGEIITVLVDGRYKVHWLTGSNHQDRVTTVTAEEIRRKI*
Ga0137359_1060935023300012923Vadose Zone SoilLRAGDVVVLRQSQEEVEGEIITVLGDGRYKVHWLSGSNYQDRVTTVTAEAIRRKI*
Ga0137416_1128012223300012927Vadose Zone SoilLRAGDVVVLLHSQEDVEGEIITVLGNGRYKVHWLTGSNYQDRVTTVTAEEIRRKI*
Ga0137404_1022898623300012929Vadose Zone SoilMAKPKSPSPPPSQLRAGDVVVLRQGREHVEGEIITVMGGGRYRVKWATGVGYRDRITTVTVDEIRKKT
Ga0137404_1114877423300012929Vadose Zone SoilMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGADYQNRVTTVTTEEVRKK*
Ga0137407_1045238913300012930Vadose Zone SoilMAKPKSPSPPPSQLRAGDVVVLRQGREHVEGEIITVMGGGRYRVKWATGVGYRDRITTVTVDEIRKKTS*
Ga0153915_1106366423300012931Freshwater WetlandsMAKPKLPPPPQPRAGDVVFLRQSQEYVEGEIITVLGGGRYRVKWETGVDYRDRITTVTTDEIRKKP*
Ga0153915_1357684323300012931Freshwater WetlandsPIMAKPKPPLPPRPQWRAGDVVVLRQSQEYVEGDIITVLMDGRYKVRWLTGSNHQDRVTTVSAEEIRRKT*
Ga0137410_1006620153300012944Vadose Zone SoilLRAGDVVVLRQSPEDVEGEITTVLGDGRYKVHWLTGSNYQGRVTTVTTEEVRKKS
Ga0137410_1086270923300012944Vadose Zone SoilPPPRPQLRAGDVVVLRQSQEEVEGEIITVLGDGRYKVHWLSGSNYQDRVTTVTTEEIRRKT*
Ga0137410_1096205023300012944Vadose Zone SoilVVVPRQSQQDAEGEIITVEGDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS*
Ga0126375_1028517933300012948Tropical Forest SoilMGSIRLQATREGLLMAKSKSPPPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTANEIRKKG*
Ga0126369_1040420523300012971Tropical Forest SoilPPPPQPRAGDVVVLRQSQQYVEGEIITVLGEGLYRVKWNTGVDYRDRITTVTVAEIRKRT
Ga0180063_102503133300014885SoilMAKPSPPPRPQLRAGDVVVLRQSQEYAEGEIITVLGGGRYKVRWLTGSDYKNRVTTVTTEEVRKKS*
Ga0137405_130376423300015053Vadose Zone SoilMLSCSARSQEYVEGEIITVLGDGRYKVRWLTGSDYQGRVTTVTDGDVRKKS*
Ga0137409_1009825933300015245Vadose Zone SoilVVLRQSQEYVEGEIITVLVDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS*
Ga0180075_110277713300015252SoilMAKPKPPPPSQPRAGDVVFLRQSQEYVEGEIITVLGGGRYRVKWETGVDYRDRITTVTADEIRKKP*
Ga0180085_111891423300015259SoilMAKPSPPPRPQLRAGDVVVLRQSQEYAEGEIITVLGSGRYKVRWLTGSDYKNRVTTVTTEEVRKKS*
Ga0137403_1063252013300015264Vadose Zone SoilGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQNRVTTVTTEEVRKK*
Ga0184604_1002413023300018000Groundwater SedimentMAKPSPPPRPKLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGSEYQGRVTTVTTEDVRKKS
Ga0184604_1022156923300018000Groundwater SedimentMAKKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0184605_1011995623300018027Groundwater SedimentMAKKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWRTGSDYQGRVTTVTTEDVRKKS
Ga0184608_1021914423300018028Groundwater SedimentMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGSDHQGRVTTVTTEDVRKKS
Ga0184626_1013423123300018053Groundwater SedimentMPKPSPPPRPQLRAGDVVVLRQSQEYVEGEIITVLGDGRYKVRWLTGSDYQNRVTTVTTEEVRKKS
Ga0184623_1000878923300018056Groundwater SedimentMAKPSPPPRPQLRAGDVVVVRQSQEYVEGEIITVLVDGRYKVRWLTGSDYQSRVTTVTTEEVRKKS
Ga0184619_1034879023300018061Groundwater SedimentMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0184637_1003404323300018063Groundwater SedimentMAKPKPPPPLQPRAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGVDHRDRITTVTADEIRKKL
Ga0184609_1001250433300018076Groundwater SedimentMAKPSPPPRPELRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGSDYQGRVTTVTTEDVRKKS
Ga0184629_1024837933300018084Groundwater SedimentMAKPKPLPPPQPRAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGVDHRDRITTVTVDEIRKKL
Ga0184629_1068383023300018084Groundwater SedimentMAKSSPPPRPQLRAGDVVVLRKGPEYVEGEIITVLGDSRYKVRWLTGSDYQNRVTTVTTEEVRKKS
Ga0190265_1087333233300018422SoilMPKPSPPPRPQLRAGDVVVLHQSQEHVEGEIITVLGDGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0187894_1004795123300019360Microbial Mat On RocksMAKPSPPPRPQLRAGDVVVLRQSPEHVEGEIITVLGDGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0187892_1000888173300019458Bio-OozeMAKPSPPPQLRAGDVVVLRQSQEHVEGEIITVVGDGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0187892_1022469713300019458Bio-OozeMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0193723_108329423300019879SoilMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGADHQNRVTTVTTEEVRKK
Ga0193707_105093823300019881SoilMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGSDYQGRVTTVTTEDVRKKS
Ga0193707_114673223300019881SoilVVVHSQEDVEGEIITVLGDGRYKVRWLTGSDFQNRVTTVTTEEVRKKS
Ga0179594_1008889413300020170Vadose Zone SoilVLRQSQEHVEGEIITVLGAGRYKVRWLTGADYQNRVTTVTTEEVRKK
Ga0210407_1018680323300020579SoilMARPKPPPPRPQLRAGDVVVLRQSQESIEGEIIAVLADGRYKVRWLTGPDYQNRVTTVTTEEIRKKN
Ga0210403_1008845013300020580SoilMARPKPPPPRPQLRAGDVVVLRQSQDAVEGEIIAVLTDGHYKVRWLTGVDYQHRVTTVTTEEIRKKTEL
Ga0210382_1008259023300021080Groundwater SedimentEIITVLADGRYKVRWLTGSDYQGRVTTVTTEDVRKKS
Ga0210382_1041533113300021080Groundwater SedimentMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLADGRYKVRWLTGSDYQGRVTTVTTEDVRKKS
Ga0210408_1061242223300021178SoilMARPKPPPPRPQLRAGDVVVLRQSQDAVEGEIIAVLTDGHYKVRWLTGVDYQHRVTTVTTEEIRKKTELGRS
Ga0222623_1015821823300022694Groundwater SedimentMAKPSPPPRPELRAGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0209640_1110806913300025324SoilMAKPKPPPRPQPRAGDVVVLRQSQEYVEGEIITVLGGGRYKVKWATGVDYRDRITTVTADAIRKKT
Ga0207423_100722133300025535Natural And Restored WetlandsMAKPKSPSPPPSQPRAGDVVVLRQSPEHVEGEIITVLGGGRYRVKWATGVDYRDRITTVTVDEIRKKTS
Ga0207653_1014762923300025885Corn, Switchgrass And Miscanthus RhizosphereMGKKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGADYQNRVTTVATEEVRKK
Ga0207645_1002161753300025907Miscanthus RhizosphereMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGADYQNRVTTVATEEVRKK
Ga0207684_1000404963300025910Corn, Switchgrass And Miscanthus RhizosphereMAKPSPPPRPQLRAGDVVVLRQSHEYVEGEIITVLVDGRYKVRWLTGSDFQNRVTTVTTEEVRKKS
Ga0207684_1005291523300025910Corn, Switchgrass And Miscanthus RhizosphereLRAGDVAVLRQSQEHVEGEIITVLVDDRYKVRWLTVSDYQNRVSTVATEEIRRKTQLGRC
Ga0207646_1011563713300025922Corn, Switchgrass And Miscanthus RhizosphereLHSQEDVEGEIITVLRDGRYKVHWLTGSNYQDRVTTVTAEAIRRKT
Ga0207646_1016562733300025922Corn, Switchgrass And Miscanthus RhizosphereMAKPKSPPPPRPQLRAGDVVVLRQSREYVEGEIITVLVDGRYKVHWLTGSNYQNRVTTVITEEVRKKS
Ga0207646_1107789713300025922Corn, Switchgrass And Miscanthus RhizosphereMAKPKPLPPPRPRAGDVVVLRQGPEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTADEIRKKL
Ga0207646_1162701013300025922Corn, Switchgrass And Miscanthus RhizospherePSHSQATRGTAIMAKPKPPARPQLRAGDVVVLRQSGEYVEGEIITILADGRYKVRWLTGLAYRDRIATVTIDEIHKKT
Ga0207640_1026692023300025981Corn RhizosphereLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGADYQNRVTTVATEEVRKK
Ga0209131_120978323300026320Grasslands SoilMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGADYQNRVTTVTTEEVRKK
Ga0257173_100564413300026360SoilPQLRAGDVVVLRQSQEDVEGEIITVLGDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS
Ga0257179_102023013300026371SoilMAKPKSPPPPQPRAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGVGHRDRITTVTADEIRKKL
Ga0257179_104146713300026371SoilMAKPSPPPRPQLRAGDVVVLRQSQEYVEGEIITVLGDGRYKVRWLTGSDYQGRVTTVTTEEVRKKS
Ga0257169_105607313300026469SoilLRQSQEYVEGEIITVLVDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS
Ga0257161_113165813300026508SoilKPKSPPPPQPRAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGVGHRDRITTVTADEIRKKL
Ga0209846_104487013300027277Groundwater SandMAKPKPPARPLLRAGDLVVLRQSGEYVEGEIITILADGRYKVRWLTGLAYRDRITTVTIDEIHKKT
Ga0209466_108519223300027646Tropical Forest SoilRGPAHGQAEIASPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTANEIRKKV
Ga0209799_115316513300027654Tropical Forest SoilMAKSKSPPPPQPRAGDVVVLRQSQEHVEGEIITVLGGGRYRVKWETGVDYRDRITTVTANEIRKKV
Ga0209328_1015637233300027727Forest SoilPPPRPQLRAGDVVVLRQSQEYVEGEIITVLGDGRYKVHWLTGSNYQNRVTTVTTEEVRKK
Ga0209180_1001746343300027846Vadose Zone SoilVLRQSQEYVEGEIITVLADGRYKVRWLTSNYQNRVTTVTMEEVRKKS
Ga0209180_1011078823300027846Vadose Zone SoilMAKSSPPPRPQLRAGDVVVLRQSQEYVEGEIITALVDGRYKVRWLTGSDYQNRVTTVTTDEVRKKS
Ga0209701_1008018043300027862Vadose Zone SoilMAKSSPPPRPQLRAGDVVVLRQSQEYVEGEIITVLADGRYKVRWLTSNYQNRVTTVTMEEVRKKS
Ga0209590_1009168413300027882Vadose Zone SoilPKPPPRPRAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGVGHRDRITTVTADEIRKK
Ga0209488_1036481323300027903Vadose Zone SoilMAKPKPPPPLRPQLRAGDVVVLRQSQEYVEDEIITVLVDGRYKVHWLTGSNYQNRVTTVTTEEVRKKS
Ga0209382_1048955833300027909Populus RhizosphereMAKPSPPPRPQLRAGDVVVLRESQEHVEGEIITVLGDGRYKVRWLTGSDYQSRV
Ga0209069_1024016923300027915WatershedsMAKPKSPPPPRPQLRAGDVVVLRESQESIEGEIIAVMADGRYKVRWLTGSDYQNRVTTVTTEEIRKKN
(restricted) Ga0233417_1026403413300028043SedimentMRRFVPTPLRPRLRAGDAVVLLGSPEYIEGEIITVLTGDRYRARWTTGPGYESRVTTVTTDEVRKKSPS
Ga0268264_1197750523300028381Switchgrass RhizosphereHVEGEIITVLGDGRYKVRWLTGADHQNRVTTVTTEEVRKK
Ga0307312_1044014023300028828SoilSPPPPPQLRAGDVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGSDYQGRVTTVTTEDVRKKS
Ga0307312_1058759923300028828SoilMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0308309_1110330623300028906SoilMARPKPPPPRPQLRAGDVVVLRQSQESVEGEIIAVLQDGRYKVRWLTGSDYQNRVTTVTTEEIRKES
Ga0308187_1021712913300031114SoilLRAGDVVVLRQSQEHVEGEIITVLGAGRYKVRWLTGSDYRNRVTTVTTEEVRKK
Ga0307469_1008224223300031720Hardwood Forest SoilMARPKPLPPRPQLRAGDVVVLRQSQDAVEGEIIAVLTDGHYKVRWLTGVDYQHRVTTVTTEEIRKKTELGRS
Ga0307468_10001953543300031740Hardwood Forest SoilMAKPSPPPRPQLRAGDVVVLRQSQEHVEGEIITVLGEGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0307468_10023912443300031740Hardwood Forest SoilVVVLRQSQEHVEGEIITVLGDGRYKVRWLTGADHQNRVTTVTTEEVRKK
Ga0307473_1010138923300031820Hardwood Forest SoilMARPKPLPPRPQLRAGDVVVLRQSRDAVEGEIIAVLTDGRYKVRWLTGSDYQNRVTTVTTEEIRKKTELGRS
Ga0315278_1063091623300031997SedimentMAKPKPPPPAQLRAGDVVVLRQSQESVEGEIITVLGGSRYRVKWETGIDYRDRITTVTADEIRKKP
Ga0315278_1086311423300031997SedimentMAKPKPPLPPQPRAGDVVVLRQSQEYVEGEIITVLGGGRYRVKWETGVDHRDRITTVTADEIRTKL
Ga0307471_10164077513300032180Hardwood Forest SoilPQLRAGDVVVLRQSQEHVEGEIITVLGGGRYKVRWLTGSDYQNRVTTVTTEEVRKK
Ga0307471_10278696613300032180Hardwood Forest SoilRPKPPPPRPQLRAGDVVVLRQSQDAVEGEIIAVLTDGHYKVRWLTGVDYQHRVTTVTTEEIRKKTELGRS
Ga0315275_1082068513300032401SedimentMMAKPKPPPPAQLRAGDVVVLRQSQESVEGEIITVLGGSRYRVKWETGIDYRDRITTVTADEIRKKP
Ga0214471_1089889623300033417SoilPPPPQPRAGDVVFLRQSQEYVEGEIITVLGGGRYRVKWETGVDYRDRITTVTTDEIRKKP


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