Metagenome / Metatranscriptome Family F039215

Basic Information
Family ID	F039215
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	72 residues
Representative Sequence	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Number of Associated Samples	138
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.44 %
% of genes near scaffold ends (potentially truncated)	53.66 %
% of genes from short scaffolds (< 2000 bps)	90.85 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (73.171 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (32.927 % of family members)
Environment Ontology (ENVO)	Unclassified (39.634 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.341 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.68% Coil/Unstructured: 74.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF02586	SRAP	3.66
PF03401	TctC	1.22
PF08281	Sigma70_r4_2	1.22
PF13551	HTH_29	0.61
PF13340	DUF4096	0.61
PF13620	CarboxypepD_reg	0.61
PF07813	LTXXQ	0.61
PF04392	ABC_sub_bind	0.61
PF01551	Peptidase_M23	0.61
PF13442	Cytochrome_CBB3	0.61
PF03450	CO_deh_flav_C	0.61
PF00656	Peptidase_C14	0.61
PF13328	HD_4	0.61
PF04542	Sigma70_r2	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	3.66
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.44
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.22
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.61
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.61
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.61
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.61
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.61
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.61

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
All Organisms	root	All Organisms	26.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
cellular organisms	root	All Organisms → cellular organisms	26.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.05 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.22 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.61 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
unclassified Methylocystaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae	1.22 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	0.61 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1.22 %
Methylomonas koyamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas koyamae	0.61 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.61 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.61 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1.22 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.61 %
Methylomonas koyamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas koyamae	0.61 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.61 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102H5705	Not Available	532	Open in IMG/M
2170459005\|F1BAP7Q02HCIE5	Not Available	547	Open in IMG/M
2170459010\|GIO7OMY01ED423	Not Available	523	Open in IMG/M
2170459013\|GO6OHWN01DN6BO	Not Available	504	Open in IMG/M
3300001686\|C688J18823_10473316	Not Available	805	Open in IMG/M
3300002568\|C688J35102_120521657	Not Available	1141	Open in IMG/M
3300002568\|C688J35102_120912313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2254	Open in IMG/M
3300005093\|Ga0062594_103072903	Not Available	522	Open in IMG/M
3300005147\|Ga0066821_1006546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	758	Open in IMG/M
3300005163\|Ga0066823_10000722	All Organisms → cellular organisms → Bacteria → Proteobacteria	3585	Open in IMG/M
3300005165\|Ga0066869_10051647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	726	Open in IMG/M
3300005168\|Ga0066809_10046944	Not Available	959	Open in IMG/M
3300005168\|Ga0066809_10116501	Not Available	668	Open in IMG/M
3300005173\|Ga0066822_1008131	Not Available	644	Open in IMG/M
3300005328\|Ga0070676_10108756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1723	Open in IMG/M
3300005335\|Ga0070666_10713788	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005338\|Ga0068868_100105853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2281	Open in IMG/M
3300005355\|Ga0070671_100151339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1959	Open in IMG/M
3300005356\|Ga0070674_100955316	Not Available	750	Open in IMG/M
3300005356\|Ga0070674_101100537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300005367\|Ga0070667_100065460	Not Available	3086	Open in IMG/M
3300005367\|Ga0070667_100379105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1284	Open in IMG/M
3300005436\|Ga0070713_100189566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1852	Open in IMG/M
3300005456\|Ga0070678_100036202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3452	Open in IMG/M
3300005457\|Ga0070662_101330097	Not Available	618	Open in IMG/M
3300005458\|Ga0070681_11834607	Not Available	533	Open in IMG/M
3300005548\|Ga0070665_100237894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1821	Open in IMG/M
3300005548\|Ga0070665_100692193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032	Open in IMG/M
3300005548\|Ga0070665_100786624	Not Available	964	Open in IMG/M
3300005614\|Ga0068856_102359734	Not Available	540	Open in IMG/M
3300005616\|Ga0068852_101188590	Not Available	784	Open in IMG/M
3300005834\|Ga0068851_10213432	Not Available	1082	Open in IMG/M
3300006051\|Ga0075364_10187681	Not Available	1400	Open in IMG/M
3300006178\|Ga0075367_10347387	Not Available	936	Open in IMG/M
3300006195\|Ga0075366_11086708	Not Available	500	Open in IMG/M
3300006196\|Ga0075422_10161266	Not Available	902	Open in IMG/M
3300006353\|Ga0075370_10154611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1345	Open in IMG/M
3300006573\|Ga0074055_10007528	Not Available	777	Open in IMG/M
3300006581\|Ga0074048_10080577	Not Available	944	Open in IMG/M
3300006603\|Ga0074064_10000588	Not Available	596	Open in IMG/M
3300006605\|Ga0074057_11790212	Not Available	1110	Open in IMG/M
3300006881\|Ga0068865_100243647	Not Available	1416	Open in IMG/M
3300009011\|Ga0105251_10181241	Not Available	949	Open in IMG/M
3300009036\|Ga0105244_10253514	Not Available	820	Open in IMG/M
3300009101\|Ga0105247_10682060	Not Available	771	Open in IMG/M
3300009148\|Ga0105243_11142818	Not Available	789	Open in IMG/M
3300009156\|Ga0111538_11932526	Not Available	742	Open in IMG/M
3300009176\|Ga0105242_10133913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2143	Open in IMG/M
3300011119\|Ga0105246_12056684	Not Available	552	Open in IMG/M
3300012212\|Ga0150985_108764466	Not Available	796	Open in IMG/M
3300012212\|Ga0150985_121140315	Not Available	695	Open in IMG/M
3300012469\|Ga0150984_123240542	Not Available	1764	Open in IMG/M
3300012508\|Ga0157315_1052481	Not Available	552	Open in IMG/M
3300012515\|Ga0157338_1014077	Not Available	857	Open in IMG/M
3300012884\|Ga0157300_1032519	Not Available	751	Open in IMG/M
3300012904\|Ga0157282_10307721	Not Available	560	Open in IMG/M
3300012913\|Ga0157298_10367057	Not Available	536	Open in IMG/M
3300012914\|Ga0157297_10100066	Not Available	869	Open in IMG/M
3300012915\|Ga0157302_10189338	Not Available	730	Open in IMG/M
3300012915\|Ga0157302_10277928	Not Available	640	Open in IMG/M
3300012924\|Ga0137413_10413609	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300012939\|Ga0162650_100027602	Not Available	852	Open in IMG/M
3300012951\|Ga0164300_10366694	Not Available	779	Open in IMG/M
3300012955\|Ga0164298_10006922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4184	Open in IMG/M
3300012955\|Ga0164298_11385025	Not Available	543	Open in IMG/M
3300012957\|Ga0164303_10003135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4936	Open in IMG/M
3300012957\|Ga0164303_10008808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3407	Open in IMG/M
3300012958\|Ga0164299_10015448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2985	Open in IMG/M
3300012958\|Ga0164299_10087084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1585	Open in IMG/M
3300012960\|Ga0164301_10428388	Not Available	934	Open in IMG/M
3300012984\|Ga0164309_10304949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1150	Open in IMG/M
3300012985\|Ga0164308_10549445	Not Available	975	Open in IMG/M
3300012985\|Ga0164308_11449439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300012988\|Ga0164306_10136217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1655	Open in IMG/M
3300013100\|Ga0157373_11354244	Not Available	540	Open in IMG/M
3300013102\|Ga0157371_10395244	Not Available	1011	Open in IMG/M
3300013102\|Ga0157371_11017783	Not Available	632	Open in IMG/M
3300013296\|Ga0157374_10333688	Not Available	1504	Open in IMG/M
3300013297\|Ga0157378_10111968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2503	Open in IMG/M
3300013297\|Ga0157378_12478780	Not Available	571	Open in IMG/M
3300013306\|Ga0163162_11024913	Not Available	934	Open in IMG/M
3300013307\|Ga0157372_13007923	Not Available	539	Open in IMG/M
3300013308\|Ga0157375_10958133	Not Available	997	Open in IMG/M
3300014325\|Ga0163163_10924003	Not Available	936	Open in IMG/M
3300014326\|Ga0157380_10134104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	2117	Open in IMG/M
3300014969\|Ga0157376_10260111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1626	Open in IMG/M
3300015372\|Ga0132256_100586733	Not Available	1229	Open in IMG/M
3300015372\|Ga0132256_103305871	Not Available	542	Open in IMG/M
3300015373\|Ga0132257_100667981	Not Available	1289	Open in IMG/M
3300015374\|Ga0132255_103307861	Not Available	687	Open in IMG/M
3300015374\|Ga0132255_104193302	Not Available	611	Open in IMG/M
3300017965\|Ga0190266_10429219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	744	Open in IMG/M
3300017965\|Ga0190266_10547128	Not Available	687	Open in IMG/M
3300018000\|Ga0184604_10267852	Not Available	599	Open in IMG/M
3300018027\|Ga0184605_10457239	Not Available	562	Open in IMG/M
3300018031\|Ga0184634_10325846	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300018051\|Ga0184620_10125600	Not Available	813	Open in IMG/M
3300018051\|Ga0184620_10255382	Not Available	588	Open in IMG/M
3300018066\|Ga0184617_1096414	Not Available	821	Open in IMG/M
3300018067\|Ga0184611_1126056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas koyamae	900	Open in IMG/M
3300018071\|Ga0184618_10270700	Not Available	720	Open in IMG/M
3300018073\|Ga0184624_10389974	Not Available	619	Open in IMG/M
3300018074\|Ga0184640_10144094	Not Available	1059	Open in IMG/M
3300018429\|Ga0190272_12137601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300018469\|Ga0190270_10315993	Not Available	1401	Open in IMG/M
3300018481\|Ga0190271_11673420	Not Available	750	Open in IMG/M
3300018481\|Ga0190271_12787122	Not Available	587	Open in IMG/M
3300019873\|Ga0193700_1073907	Not Available	501	Open in IMG/M
3300019885\|Ga0193747_1141462	Not Available	554	Open in IMG/M
3300019996\|Ga0193693_1044735	Not Available	728	Open in IMG/M
3300020016\|Ga0193696_1025031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1600	Open in IMG/M
3300022694\|Ga0222623_10276336	Not Available	646	Open in IMG/M
3300022886\|Ga0247746_1194177	Not Available	531	Open in IMG/M
3300025898\|Ga0207692_10468412	Not Available	795	Open in IMG/M
3300025899\|Ga0207642_10704962	Not Available	636	Open in IMG/M
3300025900\|Ga0207710_10317289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	790	Open in IMG/M
3300025903\|Ga0207680_10342258	Not Available	1049	Open in IMG/M
3300025905\|Ga0207685_10079888	Not Available	1350	Open in IMG/M
3300025905\|Ga0207685_10829178	Not Available	511	Open in IMG/M
3300025918\|Ga0207662_10967110	Not Available	604	Open in IMG/M
3300025920\|Ga0207649_10422443	Not Available	1001	Open in IMG/M
3300025920\|Ga0207649_10842078	Not Available	717	Open in IMG/M
3300025933\|Ga0207706_10172662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1899	Open in IMG/M
3300025941\|Ga0207711_11888004	Not Available	540	Open in IMG/M
3300026067\|Ga0207678_10162904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1905	Open in IMG/M
3300026089\|Ga0207648_10234901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1631	Open in IMG/M
3300026118\|Ga0207675_100174068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2058	Open in IMG/M
3300026121\|Ga0207683_10691750	Not Available	945	Open in IMG/M
3300027288\|Ga0208525_1003146	Not Available	1678	Open in IMG/M
3300027560\|Ga0207981_1081953	Not Available	594	Open in IMG/M
3300027866\|Ga0209813_10470891	Not Available	517	Open in IMG/M
3300028707\|Ga0307291_1131636	Not Available	632	Open in IMG/M
3300028708\|Ga0307295_10022186	Not Available	1557	Open in IMG/M
3300028711\|Ga0307293_10104072	Not Available	901	Open in IMG/M
3300028714\|Ga0307309_10203464	Not Available	522	Open in IMG/M
3300028719\|Ga0307301_10060629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1172	Open in IMG/M
3300028720\|Ga0307317_10041236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1463	Open in IMG/M
3300028722\|Ga0307319_10092369	Not Available	967	Open in IMG/M
3300028755\|Ga0307316_10248243	Not Available	646	Open in IMG/M
3300028768\|Ga0307280_10192564	Not Available	718	Open in IMG/M
3300028778\|Ga0307288_10039267	Not Available	1597	Open in IMG/M
3300028803\|Ga0307281_10355684	Not Available	554	Open in IMG/M
3300028810\|Ga0307294_10014464	Not Available	2007	Open in IMG/M
3300028811\|Ga0307292_10216099	Not Available	790	Open in IMG/M
3300028811\|Ga0307292_10370214	Not Available	606	Open in IMG/M
3300028824\|Ga0307310_10117576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1199	Open in IMG/M
3300028828\|Ga0307312_10805946	Not Available	622	Open in IMG/M
3300028828\|Ga0307312_11085625	Not Available	529	Open in IMG/M
3300028875\|Ga0307289_10077682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1343	Open in IMG/M
3300028875\|Ga0307289_10256490	Not Available	719	Open in IMG/M
3300028878\|Ga0307278_10065056	Not Available	1645	Open in IMG/M
3300028884\|Ga0307308_10554438	Not Available	551	Open in IMG/M
3300028885\|Ga0307304_10028008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1961	Open in IMG/M
3300030990\|Ga0308178_1144202	Not Available	543	Open in IMG/M
3300031170\|Ga0307498_10000713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4540	Open in IMG/M
3300031170\|Ga0307498_10027379	Not Available	1369	Open in IMG/M
3300031547\|Ga0310887_10371324	Not Available	835	Open in IMG/M
3300031740\|Ga0307468_100790375	Not Available	808	Open in IMG/M
3300031740\|Ga0307468_102277913	Not Available	526	Open in IMG/M
3300032013\|Ga0310906_10093489	Not Available	1629	Open in IMG/M
3300032205\|Ga0307472_101708596	Not Available	622	Open in IMG/M
3300033551\|Ga0247830_11714850	Not Available	503	Open in IMG/M
3300034354\|Ga0364943_0162646	Not Available	809	Open in IMG/M
3300034447\|Ga0370544_18841	Not Available	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.59%
Host-Associated	Host-Associated	38.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.88%
Plants	Host-Associated → Plants	38.41%
Aquatic	Environmental → Aquatic	6.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.98%
Sediment	Environmental → Aquatic → Sediment	6.71%
Roots	Host-Associated → Plants → Roots	3.66%
Floodplain	Environmental → Terrestrial → Floodplain	0.61%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.71%
Loam	Environmental → Terrestrial → Soil → Loam	5.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.05%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.05%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.22%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.61%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.22%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.61%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	32.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.88%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.05%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.22%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.61%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_05618920	2170459002	Grass Soil	HSVARFTLLGEMIEDTAHRYYYRPHVGGEVTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
E41_11637050	2170459005	Grass Soil	MTTILRKYHSVARCTLLGEMIEDTAHHYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGKNSR
F62_05451630	2170459010	Grass Soil	RKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANRQHASSEE
N57_01603630	2170459013	Grass Soil	KYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPASQQRGSAVGTNSR
C688J18823_104733163	3300001686	Soil	TILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAFADKQSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
C688J35102_1205216573	3300002568	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQ
C688J35102_1209123131	3300002568	Soil	RGMTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0062594_1030729031	3300005093	Soil	LRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0066821_10065461	3300005147	Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0066823_100007227	3300005163	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAV
Ga0066869_100516472	3300005165	Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAV
Ga0066809_100469442	3300005168	Soil	RLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0066809_101165011	3300005168	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPASQQGGSAVGTNSR*
Ga0066822_10081311	3300005173	Soil	VARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0070676_101087564	3300005328	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEG*
Ga0070666_107137882	3300005335	Switchgrass Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0068868_1001058531	3300005338	Miscanthus Rhizosphere	LRGRVRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0070671_1001513391	3300005355	Switchgrass Rhizosphere	RLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0070674_1009553161	3300005356	Miscanthus Rhizosphere	RLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRLRANDELTFVDKQSPAIHTAPCPACPNWPASE*
Ga0070674_1011005371	3300005356	Miscanthus Rhizosphere	MTTILHKYHSVARCTLLGEMIEDTATRYYYRLRSSDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVG
Ga0070667_1000654604	3300005367	Switchgrass Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0070667_1003791052	3300005367	Switchgrass Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRPRFNGELNFVDKLSPAIHIAPCPACPDWLANQQHASSEE*
Ga0070713_1001895661	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSA
Ga0070678_1000362022	3300005456	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0070662_1013300971	3300005457	Corn Rhizosphere	VRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0070681_118346071	3300005458	Corn Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRLRANDELTFVDKQSPAIHTAPCPACPDWPASE*
Ga0070665_1002378942	3300005548	Switchgrass Rhizosphere	TTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0070665_1006921932	3300005548	Switchgrass Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRLRSSDELTFVEKSPAIHIAPCPACPDWLASQRHSSTEESAGTPR*
Ga0070665_1007866242	3300005548	Switchgrass Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAIADKESPAIHLTPCPACPDWPADQQHGGAVGTSSR*
Ga0068856_1023597341	3300005614	Corn Rhizosphere	RGRVRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0068852_1011885902	3300005616	Corn Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRLRANDELTFVDKQSPAIHTAPCPACPNWPASE*
Ga0068851_102134321	3300005834	Corn Rhizosphere	RVRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0075364_101876811	3300006051	Populus Endosphere	RLRGMTTILRKYHFVARCTLLGEMIEDTATRYYYRLRSSDELTFVDKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0075367_103473872	3300006178	Populus Endosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPDVGAEMTFVVKSRAIHLTPCPACPDWPAGALKDLDEDGRR*
Ga0075366_110867081	3300006195	Populus Endosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAFADKESPAIHLTPCPACPDWP
Ga0075422_101612661	3300006196	Populus Rhizosphere	SLRGGVRRLRGMTTILRKYQSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0075370_101546112	3300006353	Populus Endosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAFADKASPAIHLTPCPACPDWPADQQRGSALGTSCR*
Ga0074055_100075281	3300006573	Soil	YHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0074048_100805771	3300006581	Soil	VRRLRGMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0074064_100005881	3300006603	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPASQQRGSAVGTNSR*
Ga0074057_117902121	3300006605	Soil	ILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0068865_1002436474	3300006881	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQ
Ga0105251_101812411	3300009011	Switchgrass Rhizosphere	ILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0105244_102535141	3300009036	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVRTNSR*
Ga0105247_106820602	3300009101	Switchgrass Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTARRYYYRAHVGGELTFADKDSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0105243_111428183	3300009148	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTARRYYYRPHVGGELTFADKESPAIHLTPCPACPDWLASQRHSSPEE*
Ga0111538_119325261	3300009156	Populus Rhizosphere	MTTILRKYHSVARCTLLGDLIEDTATRYYYRPRFNGELTFVDKQSPAIHIAPCPACPDWLANQQHASSEG*
Ga0105242_101339131	3300009176	Miscanthus Rhizosphere	KCLAERNKSEGKGGMTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0105246_120566841	3300011119	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRLRSSDELTFVDKSPAIHITPCPACPDWLAGQQCSSDVVTNLRRHGPSS*
Ga0150985_1087644661	3300012212	Avena Fatua Rhizosphere	GMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0150985_1211403151	3300012212	Avena Fatua Rhizosphere	KYHSVDRCTLLGEMIEDTATRYYYRLRSSDELTFVEKSPAIHIAPCPACPDWLASQRHSSPEE*
Ga0150984_1232405421	3300012469	Avena Fatua Rhizosphere	PAMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAFADKQSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0157315_10524811	3300012508	Arabidopsis Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPGQQRGSAVGTNSR*
Ga0157338_10140771	3300012515	Arabidopsis Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRLRSSDELTFAEKSPAIHLTPCPACPDWPAGQQRGSAVGTTGD
Ga0157300_10325191	3300012884	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPADQQHGSAVGTCSR*
Ga0157282_103077212	3300012904	Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYHLRANDELTFVDKQSPAIHTAPCPACPNWPASE*
Ga0157298_103670572	3300012913	Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQ
Ga0157297_101000662	3300012914	Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYRLRANDELTFVDKQSPAIHTAPCPACPDWLANQQHASSEE*
Ga0157302_101893381	3300012915	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAIADKESPAIHLTPCPACPDWPAGALKDLDEDGRR*
Ga0157302_102779281	3300012915	Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYRLRANDELTFVDKQSPAIHTAPCPACPDW
Ga0137413_104136092	3300012924	Vadose Zone Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYRQCVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0162650_1000276022	3300012939	Soil	MTTILRKYHFVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR*
Ga0164300_103666941	3300012951	Soil	MTTILRKYHSVARCTLLGEMVEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0164298_100069223	3300012955	Soil	MTTILRKYHSAARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0164298_113850251	3300012955	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVVRESPAIHLTPCPACPDWPADQQRGSAVGTNAR*
Ga0164303_100031353	3300012957	Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWPANQQHASSEE*
Ga0164303_100088081	3300012957	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQPGSAVGTNSR*
Ga0164299_100154482	3300012958	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTARPACPDWPAGQQRGSAAGTNSR*
Ga0164299_100870842	3300012958	Soil	MTTILRKYHSVARCTLLGEMIEDTAARYYYRQRANNELTFVDKQSPAIHLAPCPACPDWLADSDTHPALQK*
Ga0164301_104283883	3300012960	Soil	MATILRKYHSVARCTLLGEMIEDTATRYYYRPHLGAELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNS*
Ga0164309_103049492	3300012984	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAFADKESPAIHLTPCPACPDWPGQQRGSAVGTNSR*
Ga0164308_105494451	3300012985	Soil	RLRGMTTILRKYHSVARCTLLGEMIEDTAARYYYRQRANNELTFVDKQSPAIHLAPCPACPDWLADSDTHPALQK*
Ga0164308_114494392	3300012985	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAIADKESPAIHLTPCPACPDWPAD
Ga0164306_101362171	3300012988	Soil	HARAGPPVARQASAPAMTTILRKYHSVARCTLLGEMIEDTAARYYYRQRANNELTFVDKQSPAIHLAPCPACPDWLADSDTHPALQK*
Ga0157373_113542442	3300013100	Corn Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPDWLA
Ga0157371_103952441	3300013102	Corn Rhizosphere	ARCTLLGEMIEDTAHRYYYRPDVGAEMTFVVKSRAIHLTPCPACPDWLAGQQRGSAVRINSR*
Ga0157371_110177832	3300013102	Corn Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRPRFNGELTFVDKQSPAIHIAPCPACPDWP
Ga0157374_103336883	3300013296	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYGQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0157378_101119684	3300013297	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSAE*
Ga0157378_124787801	3300013297	Miscanthus Rhizosphere	TILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPAIHLTPCPACQDWPASQQRGSAVRTNSR*
Ga0163162_110249131	3300013306	Switchgrass Rhizosphere	MTTILRKYHSVARCTRLGEMIEDTATRYYYRLRSSDELTFVDKSPAIHITPCPACPDWLAGQQCSSDVVTNLRRHGPSS*
Ga0157372_130079231	3300013307	Corn Rhizosphere	MTTILRKYHSVAGCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE*
Ga0157375_109581334	3300013308	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPAGQRRVSAVGTNSR*
Ga0163163_109240031	3300014325	Switchgrass Rhizosphere	MTTILRKYHSVARCTLLGELIEDTAIRYYYRPHLGAELTFVDKQSPAIHLTPCPACPDWPPCRPKGEANLDSGKISGV*
Ga0157380_101341045	3300014326	Switchgrass Rhizosphere	VTTILRKYHSVARCTLLGEMIEDTATRYYYRLRSSDELTFVEKSPAINLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0157376_102601114	3300014969	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPDWPAGQQRGSAVGTNSR*
Ga0132256_1005867334	3300015372	Arabidopsis Rhizosphere	RKYHSVARCTLLGEMIEDTAHGYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR*
Ga0132256_1033058711	3300015372	Arabidopsis Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGVELAFADKESPAIHLTPCPACPDWPADQQHGSAVGTSSR*
Ga0132257_1006679811	3300015373	Arabidopsis Rhizosphere	LRGMTTILRKYHFVARCTLLGEIIEDTATRYYYRLRSSDELTFAEKSPAIHIAPCPACPDWPAGQQRGSAVGTNSR*
Ga0132255_1033078612	3300015374	Arabidopsis Rhizosphere	ILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGAELTFVDKSPAIHLTPCPACPDWPAIQQRGSAVGTNSR*
Ga0132255_1041933021	3300015374	Arabidopsis Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRLRSSDELTFVDKSPAIHLTPCPACPDWPAGQQRGSA
Ga0190266_104292192	3300017965	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAFADKQSPAIHLTPCPACPDWPAGQQ
Ga0190266_105471281	3300017965	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0184604_102678521	3300018000	Groundwater Sediment	TILRKYHSVARCTLLGEMIEDTAHRYYYRPHLGAELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0184605_104572391	3300018027	Groundwater Sediment	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0184634_103258461	3300018031	Groundwater Sediment	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNS
Ga0184620_101256002	3300018051	Groundwater Sediment	MTTILRQYHSVARCTLLGEIIEDTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPASQQRGIAVGTNSR
Ga0184620_102553822	3300018051	Groundwater Sediment	MTTILRKYHSVARCTLLGEMIEDTAHGYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0184617_10964142	3300018066	Groundwater Sediment	MTTILRKYHFVARCTLLGEMIEDTAHRYYYRPHAGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0184611_11260561	3300018067	Groundwater Sediment	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAG
Ga0184618_102707001	3300018071	Groundwater Sediment	MTTILRKYHSVARCTLLGEIIEDTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0184624_103899741	3300018073	Groundwater Sediment	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPDWPAGQQRGSAVGTNSR
Ga0184640_101440942	3300018074	Groundwater Sediment	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGT
Ga0190272_121376012	3300018429	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELAFADKRSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0190270_103159931	3300018469	Soil	GMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPAIHLTPCPACQDWPASQQRGSAVRTNSR
Ga0190271_116734202	3300018481	Soil	MTTILRKYHSVARCTLLGEMVEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPAGQPRGSAVGTNPR
Ga0190271_127871221	3300018481	Soil	VRRLRGMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKLPAIHIAPCPACPDWPAGQQRGSAVGTNSR
Ga0193700_10739071	3300019873	Soil	MTTILRKYHSVARCTLLGEIIENTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0193747_11414622	3300019885	Soil	MTTILRQYHSVARCTLLGEIIEDTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPASQ
Ga0193693_10447351	3300019996	Soil	MTTILRKYHSVARCTLLGEIIEDTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPASQQRGIAVGTNSR
Ga0193696_10250314	3300020016	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAFADKQSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0222623_102763363	3300022694	Groundwater Sediment	RCTLLGEMIEDTAHGYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0247746_11941771	3300022886	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPRVGGELAIADKESPAIHLTPCPACPDWPADQQHGSAVGTCSR
Ga0207692_104684121	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LRRGVRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRPRFNGELNFVDKLSPAIHIAPCPACPDWLANQQHASSEE
Ga0207642_107049621	3300025899	Miscanthus Rhizosphere	LRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0207710_103172892	3300025900	Switchgrass Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0207680_103422583	3300025903	Switchgrass Rhizosphere	VWQKGTNLRGRVRRLRGMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0207685_100798882	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMVEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPASQQGGSAVGTNSR
Ga0207685_108291781	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	YHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0207662_109671102	3300025918	Switchgrass Rhizosphere	VWQKGTNLRGRVRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0207649_104224431	3300025920	Corn Rhizosphere	LRKYHSVTRCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE
Ga0207649_108420781	3300025920	Corn Rhizosphere	AMTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0207706_101726623	3300025933	Corn Rhizosphere	LRKYHSVARCTLLAEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE
Ga0207711_118880041	3300025941	Switchgrass Rhizosphere	VRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRPRFNGELNFVDKLSPAIHIAPCPACPDWLANQQHASSEE
Ga0207678_101629045	3300026067	Corn Rhizosphere	TTTILRKYHSVCRCTLLGEMIEDTAHRYYYRPRGGAELTFVDKESPAIHLRPCPACPDWPAVQQRAIGTRS
Ga0207648_102349016	3300026089	Miscanthus Rhizosphere	NLRGRVRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0207675_1001740681	3300026118	Switchgrass Rhizosphere	TNLRGRVRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRSRFNDELTFVDKQSPAIHIAPCPACPDWLANQQHASSEE
Ga0207683_106917502	3300026121	Miscanthus Rhizosphere	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPDVGAEMTFVVKSRAIHLTPCPACPDWPAGALKDLDEDGRR
Ga0208525_10031464	3300027288	Soil	MTTILRKYHSVARCTLLGEIVEDTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPAGQQRG
Ga0207981_10819533	3300027560	Soil	RGMTTILRKYHSVARCTLLGEMIEDTATRYYYRQRVNDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0209813_104708911	3300027866	Populus Endosphere	TSLRGGVWRLRGMMTTILRKYHSVARCTLLGEMIEDTATRYYYRLRANDELTFVDKQSPAIHTAPCPACPDWPASE
Ga0307291_11316361	3300028707	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSA
Ga0307295_100221862	3300028708	Soil	MTTILRKYHFVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307293_101040721	3300028711	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSA
Ga0307309_102034642	3300028714	Soil	GRVRRLRGMTTILRKYHSVARCTLLGEIIEDTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGMNSR
Ga0307301_100606293	3300028719	Soil	VARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307317_100412364	3300028720	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307319_100923693	3300028722	Soil	MTTILRKYHSVARCTLLGEIIEDTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPNWPAGQQRGSAVGTNSR
Ga0307316_102482432	3300028755	Soil	MTTILRKYHSVARCTLLGEMIEDTAHGYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQ
Ga0307280_101925641	3300028768	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPACQQRRSAVRTDSR
Ga0307288_100392671	3300028778	Soil	MTTILRKYHSVARCTLLGEIIENTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPASQQRGIAVGTNSR
Ga0307281_103556842	3300028803	Soil	RLRGMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPAIHLTPCPACQDWPASQQRGSAVRTNSR
Ga0307294_100144642	3300028810	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPASQQRGSAVGMNSR
Ga0307292_102160992	3300028811	Soil	RLSGMTTILRKYHFVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307292_103702142	3300028811	Soil	IWQQGTSLRGGVRRLRGMTTILRKYHSVARCTLLGEMIEDTATRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0307310_101175761	3300028824	Soil	MTTILRKYHSVARCTLLGEMIEDSAHRYYYRSHVGGELAFADKQSPAIHLTPCPACPDWPAGGQQRGSAVGTSSR
Ga0307312_108059462	3300028828	Soil	MTTILRKYHSVARCTLLGEMIEDTAHGYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAG
Ga0307312_110856252	3300028828	Soil	SVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0307289_100776821	3300028875	Soil	RRLRGMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307289_102564901	3300028875	Soil	MTTILRKYHSVARCTLLGEIIENTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGMNSR
Ga0307278_100650567	3300028878	Soil	MTTILRKYHSVARCTLLGEMIEDTAHGYYYRPHVGGELTFADKESPAIHLTPCPTCPDWPAGQQRGSAVGTNSR
Ga0307308_105544381	3300028884	Soil	RLRGMTTILRKYHFVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307304_100280083	3300028885	Soil	RKYHSVARCTLLGEIIENTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0308178_11442022	3300030990	Soil	ARCTLLGEMIEDTAHRYYYRPHAGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307498_100007135	3300031170	Soil	MTTILRKYHSVARCTLLGEIVEDTATRYYYRLRSGDELTFVEKSPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0307498_100273794	3300031170	Soil	MTTILRKYHSVARCTLLGEMIEDTAHGYYYRPHVGGELTFADKESPAIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0310887_103713243	3300031547	Soil	TSLRGGVRRLRGMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0307468_1007903752	3300031740	Hardwood Forest Soil	MTTILRKYHSVARCTLLGEMIEDTATRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307468_1022779132	3300031740	Hardwood Forest Soil	MFGAKEQDSHGGVRRLRGMTTILRKYHSVARCTLLGEMVEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCP
Ga0310906_100934892	3300032013	Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPLGTELTFVDKESPAIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0307472_1017085962	3300032205	Hardwood Forest Soil	MTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKESPAIHLTPCPACPDWPASQQRGSAVGTNSR
Ga0247830_117148503	3300033551	Soil	GMTTILRKYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0364943_0162646_565_789	3300034354	Sediment	MTTILRKYHSVARCTLLGEMIEDTAHGYYYRPHIGGELTFADKESPAIHLTPCPACPDWPAGQQRGSAVGTNSR
Ga0370544_18841_280_501	3300034447	Soil	MTTILRRYHSVARCTLLGEMIEDTAHRYYYRPHVGGELTFVDKSPSIHLTPCPACPDWPASQQRGSAVGTNSR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039215

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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