Metagenome / Metatranscriptome Family F039120

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039120
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	59 residues
Representative Sequence	MGLAVVTVAAGGLPVVDVTATTPKLGMPVTEAANGRGVAVTKVVGKPGLPVTFVVPPL
Number of Associated Samples	129
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.34 %
% of genes near scaffold ends (potentially truncated)	25.61 %
% of genes from short scaffolds (< 2000 bps)	76.22 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.341 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (15.244 % of family members)
Environment Ontology (ENVO)	Unclassified (46.951 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.634 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 29.07% Coil/Unstructured: 70.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF01833	TIG	21.34
PF13884	Peptidase_S74	1.22
PF07729	FCD	0.61
PF00343	Phosphorylase	0.61
PF13676	TIR_2	0.61
PF00291	PALP	0.61
PF01391	Collagen	0.61
PF13640	2OG-FeII_Oxy_3	0.61
PF13619	KTSC	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.61
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.61
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.56 %
Unclassified	root	N/A	27.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.34 %
Unclassified	root	N/A	27.44 %
Viruses	superkingdom	All Organisms → Viruses	1.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.34 %
Unclassified	root	N/A	27.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.71 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	6.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.44 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	6.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.49 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.22 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	6.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.05 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.22 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.61 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	6.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.22 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.61 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.61 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.61 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	6.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.22 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.61 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	6.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.22 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.61 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	6.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.22 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.61 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102HK3LO	Not Available	502	Open in IMG/M
2170459008\|GA8OVOZ01EKUAD	Not Available	520	Open in IMG/M
2170459010\|GIO7OMY02G6FHY	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300000559\|F14TC_100087484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7181	Open in IMG/M
3300000559\|F14TC_101022194	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300000858\|JGI10213J12805_10433744	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300000956\|JGI10216J12902_107098323	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	706	Open in IMG/M
3300004114\|Ga0062593_100300374	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1367	Open in IMG/M
3300004114\|Ga0062593_100316828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1340	Open in IMG/M
3300004114\|Ga0062593_101758021	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300004479\|Ga0062595_102384793	Not Available	524	Open in IMG/M
3300005160\|Ga0066820_1003716	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005331\|Ga0070670_101816995	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005333\|Ga0070677_10367224	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	750	Open in IMG/M
3300005335\|Ga0070666_10050316	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300005337\|Ga0070682_100293875	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300005347\|Ga0070668_101758560	Not Available	570	Open in IMG/M
3300005355\|Ga0070671_101214957	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005356\|Ga0070674_100112035	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300005364\|Ga0070673_100110747	All Organisms → cellular organisms → Bacteria	2276	Open in IMG/M
3300005456\|Ga0070678_100238730	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300005459\|Ga0068867_100853230	Not Available	816	Open in IMG/M
3300005543\|Ga0070672_100298852	Not Available	1364	Open in IMG/M
3300005543\|Ga0070672_101451340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300005764\|Ga0066903_100001800	All Organisms → cellular organisms → Bacteria	16116	Open in IMG/M
3300005764\|Ga0066903_100181113	All Organisms → cellular organisms → Bacteria	3107	Open in IMG/M
3300005841\|Ga0068863_100638450	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300005937\|Ga0081455_10033845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4585	Open in IMG/M
3300006606\|Ga0074062_11731584	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006852\|Ga0075433_11682339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300006854\|Ga0075425_101959337	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300006904\|Ga0075424_100376750	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300006953\|Ga0074063_10230033	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009081\|Ga0105098_10259703	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300009093\|Ga0105240_11053087	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300009094\|Ga0111539_10047394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5135	Open in IMG/M
3300009094\|Ga0111539_10244153	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300009094\|Ga0111539_10868372	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300009101\|Ga0105247_10221851	Not Available	1280	Open in IMG/M
3300009146\|Ga0105091_10064465	All Organisms → cellular organisms → Bacteria → Proteobacteria	1643	Open in IMG/M
3300009146\|Ga0105091_10574516	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009148\|Ga0105243_11241688	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300009168\|Ga0105104_10018299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4150	Open in IMG/M
3300009168\|Ga0105104_10087958	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300009176\|Ga0105242_10029305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4389	Open in IMG/M
3300009176\|Ga0105242_10744969	Not Available	964	Open in IMG/M
3300009177\|Ga0105248_11975861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300009527\|Ga0114942_1154963	Not Available	801	Open in IMG/M
3300009553\|Ga0105249_12978444	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	544	Open in IMG/M
3300009597\|Ga0105259_1030678	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300009610\|Ga0105340_1043649	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300010047\|Ga0126382_11759035	Not Available	581	Open in IMG/M
3300010358\|Ga0126370_11313415	Not Available	679	Open in IMG/M
3300010362\|Ga0126377_12909481	Not Available	552	Open in IMG/M
3300010376\|Ga0126381_100485227	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1740	Open in IMG/M
3300010397\|Ga0134124_10479217	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300010397\|Ga0134124_11122500	Not Available	803	Open in IMG/M
3300010398\|Ga0126383_10837826	Not Available	1004	Open in IMG/M
3300010403\|Ga0134123_11533080	Not Available	712	Open in IMG/M
3300011400\|Ga0137312_1019127	Not Available	956	Open in IMG/M
3300011400\|Ga0137312_1034085	Not Available	789	Open in IMG/M
3300011405\|Ga0137340_1097477	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300011412\|Ga0137424_1000482	All Organisms → Viruses → Predicted Viral	3250	Open in IMG/M
3300011412\|Ga0137424_1000987	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300011412\|Ga0137424_1003897	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1637	Open in IMG/M
3300011412\|Ga0137424_1010684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1223	Open in IMG/M
3300011415\|Ga0137325_1025089	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300011415\|Ga0137325_1052166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300011415\|Ga0137325_1068393	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300011417\|Ga0137326_1065835	Not Available	802	Open in IMG/M
3300011420\|Ga0137314_1010748	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300011422\|Ga0137425_1013955	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1643	Open in IMG/M
3300011422\|Ga0137425_1061976	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300011429\|Ga0137455_1036893	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300011432\|Ga0137428_1020677	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300011438\|Ga0137451_1000143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21626	Open in IMG/M
3300011438\|Ga0137451_1036559	Not Available	1430	Open in IMG/M
3300011439\|Ga0137432_1016107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2128	Open in IMG/M
3300011440\|Ga0137433_1218835	Not Available	624	Open in IMG/M
3300011443\|Ga0137457_1177717	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012122\|Ga0137332_1030538	Not Available	627	Open in IMG/M
3300012212\|Ga0150985_112529084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3042	Open in IMG/M
3300012913\|Ga0157298_10017623	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300012971\|Ga0126369_10875721	Not Available	983	Open in IMG/M
3300012984\|Ga0164309_10201780	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300013306\|Ga0163162_11251960	Not Available	842	Open in IMG/M
3300013308\|Ga0157375_10042938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4381	Open in IMG/M
3300013308\|Ga0157375_13267648	Not Available	540	Open in IMG/M
3300014969\|Ga0157376_10885086	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300014969\|Ga0157376_11961133	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300015077\|Ga0173483_10024136	Not Available	2171	Open in IMG/M
3300015371\|Ga0132258_10074643	All Organisms → cellular organisms → Bacteria	7877	Open in IMG/M
3300015372\|Ga0132256_101921650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	699	Open in IMG/M
3300017792\|Ga0163161_10115426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2012	Open in IMG/M
3300017792\|Ga0163161_10748562	Not Available	817	Open in IMG/M
3300017965\|Ga0190266_10000032	All Organisms → cellular organisms → Bacteria → Proteobacteria	21936	Open in IMG/M
3300017965\|Ga0190266_10004859	Not Available	2995	Open in IMG/M
3300017965\|Ga0190266_10148662	Not Available	1049	Open in IMG/M
3300018031\|Ga0184634_10036636	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300018067\|Ga0184611_1100208	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300018067\|Ga0184611_1174783	Not Available	763	Open in IMG/M
3300018081\|Ga0184625_10294273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300018083\|Ga0184628_10218758	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300018083\|Ga0184628_10504656	Not Available	625	Open in IMG/M
3300018469\|Ga0190270_10000635	All Organisms → cellular organisms → Bacteria	15434	Open in IMG/M
3300018469\|Ga0190270_10264494	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300018476\|Ga0190274_11511574	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300018476\|Ga0190274_12192030	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300018481\|Ga0190271_13760687	Not Available	508	Open in IMG/M
3300022886\|Ga0247746_1001068	All Organisms → cellular organisms → Bacteria	4388	Open in IMG/M
3300022908\|Ga0247779_1039219	All Organisms → Viruses → Predicted Viral	1259	Open in IMG/M
3300023062\|Ga0247791_1017460	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300023072\|Ga0247799_1040650	Not Available	755	Open in IMG/M
3300023169\|Ga0247762_1033152	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300023263\|Ga0247800_1034845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300024177\|Ga0247686_1001143	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3210	Open in IMG/M
3300024177\|Ga0247686_1021706	Not Available	728	Open in IMG/M
3300024181\|Ga0247693_1026340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	791	Open in IMG/M
3300024232\|Ga0247664_1057725	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300024246\|Ga0247680_1052381	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300024251\|Ga0247679_1069210	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300025903\|Ga0207680_10284575	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300025914\|Ga0207671_10196616	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300025918\|Ga0207662_10110817	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300025930\|Ga0207701_10524597	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1012	Open in IMG/M
3300025934\|Ga0207686_10000218	All Organisms → cellular organisms → Bacteria	43784	Open in IMG/M
3300025934\|Ga0207686_10429604	Not Available	1012	Open in IMG/M
3300025935\|Ga0207709_11308097	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300025937\|Ga0207669_10136501	Not Available	1695	Open in IMG/M
3300025938\|Ga0207704_10961530	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	721	Open in IMG/M
3300025960\|Ga0207651_10625213	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300025972\|Ga0207668_11090039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	716	Open in IMG/M
3300026088\|Ga0207641_10015685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	6208	Open in IMG/M
3300026088\|Ga0207641_10515907	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300026121\|Ga0207683_10932073	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300027573\|Ga0208454_1096303	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300027675\|Ga0209077_1062232	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300027743\|Ga0209593_10061957	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300027907\|Ga0207428_10004138	All Organisms → cellular organisms → Bacteria	13910	Open in IMG/M
3300027907\|Ga0207428_10264004	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300027907\|Ga0207428_10559726	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300028138\|Ga0247684_1001471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3936	Open in IMG/M
3300028138\|Ga0247684_1019150	Not Available	1078	Open in IMG/M
3300028589\|Ga0247818_10880079	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300028802\|Ga0307503_10286705	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300028802\|Ga0307503_10913416	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300028803\|Ga0307281_10086878	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300031170\|Ga0307498_10443286	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300031366\|Ga0307506_10015136	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300031716\|Ga0310813_10196469	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300031720\|Ga0307469_10001762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8434	Open in IMG/M
3300031820\|Ga0307473_10460157	Not Available	849	Open in IMG/M
3300031962\|Ga0307479_10120465	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300032076\|Ga0306924_12637265	Not Available	501	Open in IMG/M
3300032180\|Ga0307471_102618069	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300034147\|Ga0364925_0144949	Not Available	860	Open in IMG/M
3300034148\|Ga0364927_0214070	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300034150\|Ga0364933_135705	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	633	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.68%
Host-Associated	Host-Associated	32.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	43.90%
Plants	Host-Associated → Plants	32.32%
Aquatic	Environmental → Aquatic	23.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.39%
Sediment	Environmental → Aquatic → Sediment	18.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.93%
Freshwater	Environmental → Aquatic → Freshwater	4.88%
Floodplain	Environmental → Terrestrial → Floodplain	1.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.22%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.27%
Loam	Environmental → Terrestrial → Soil → Loam	4.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.22%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.22%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.22%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.22%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.49%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.22%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.22%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.22%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459008	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012122	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT200_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_06790050	2170459002	Grass Soil	VASGGLPVVDVTAIAPKAGLAVTEATNGKGTAVTKVVGKPGLPVVYV
F48_01540890	2170459008	Grass Soil	MALAVVTVASGGLPVVDVTATFPKLGMPVTEAASGRGVPVTKVTPLAATGMPPGLPVTYVTPAV
F62_04619660	2170459010	Grass Soil	AVVTVATGGLPVVDVTATFPKLGMPVTEAASGRGVPITKVTTVPGLPVTYVTPAVGGLP
F14TC_1000874843	3300000559	Soil	MALPVVTIAAGGMPVVDVTATKPLLGMAVTEAANGRGLAVTKVVGKPGLPVTFVVPPL*
F14TC_1010221943	3300000559	Soil	MALPVVTVASGGIAVVDVTAVPPVPSLPVSEAAAGKGLAVTKVVGKPGLAVTYVAP*
JGI10213J12805_104337441	3300000858	Soil	VASGGMPVVDVTPIASMTPNKYGVAVTEAANGKGVPVTKVVGKPGTPVVYVVPPL*
JGI10216J12902_1070983233	3300000956	Soil	MAMVALPVVTVVSGGTPVVDVTATKPLLGAPVTEATNGRGIAVTKVAAGKPGVAVTFVT*
Ga0062593_1003003743	3300004114	Soil	VALAVVTVASGGMPVADVTATTPKLGMAISEAANGKGIAVTKVAAGKPGLAVVYVVPPP*
Ga0062593_1003168282	3300004114	Soil	MGLAVVTVASGGMPVVDVTAIAPRSGLPVTEAANGCGIAVTKVTGGKPGLPVIFVVPPL*
Ga0062593_1017580212	3300004114	Soil	MGLAVVTVASGGLPVVDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL*
Ga0062595_1023847932	3300004479	Soil	MATPVVTIASGGLPVVETPLGKPVSEAANGRGVAVTKVIGKPGLPVVYVAAAGPLKGSG*
Ga0062594_1022545883	3300005093	Soil	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEAANGRGIAVTKVSLAIGGLPVTFVAATIQTASDGGINRSRAGEVARQAS
Ga0066820_10037161	3300005160	Soil	MHMGVSVVTVASGGLPVIDVTATTPKLGLPVTEDTAGRGIAVTKVTLPKGGLPVTFVVPPL*
Ga0070690_1001241641	3300005330	Switchgrass Rhizosphere	MGLAVVTVASGGLPVVDVTGIAPRTGTPVTEATNGYGVPVTKVAALGMPVVF
Ga0070670_1018169952	3300005331	Switchgrass Rhizosphere	MGVAVVTVPSGGMPVIDVTATTPRLGVPVTEAANGRGIPVTKVTLPVGGLPVTFVVPPL*
Ga0070677_103672241	3300005333	Miscanthus Rhizosphere	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEATNGRGIAVTKVSLAIGGLPVTFVAA
Ga0070666_100503165	3300005335	Switchgrass Rhizosphere	MGMPVVTVAAGGMPVVDVTATKPGLGMPVTEAANKYGVAVTKVAVYGLPVTFV
Ga0070682_1002938751	3300005337	Corn Rhizosphere	MAQPVVTVASGGLPVVDVTATKPLLGKAVTEAANGIGRAVTKQTGGKPGIPVTFVTPAVGAP*
Ga0070668_1017585603	3300005347	Switchgrass Rhizosphere	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEATHGRGIAVTKVSLAVGGLPVTFVA
Ga0070671_1012149573	3300005355	Switchgrass Rhizosphere	VASGGMPVADVTATTPKLGMAVSEAANGRGIAVTKVAAGKPGLAVVYVVPPP*
Ga0070674_1001120353	3300005356	Miscanthus Rhizosphere	MGVPVVTVPSGGIPVVDVTATTPKLGFPVTEAANKYGIAVTKVAAGKLGLAVTYVVPPL*
Ga0070673_1001107471	3300005364	Switchgrass Rhizosphere	GYTAPQTGEQEEVMGLAVVTVASGGLPVVDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL*
Ga0070678_1002387303	3300005456	Miscanthus Rhizosphere	MPMGIPVVTKASGGLPVIDVTATKPGLGVPVTEAANGKGIAVTKVNLAIGGLPVTFAA*
Ga0068867_1008532301	3300005459	Miscanthus Rhizosphere	MGVPVVTVPSGGIPVVDVTATTPKLGFPVTEAANKYGIAVTKVAAGKLGLAVTY
Ga0070672_1002988524	3300005543	Miscanthus Rhizosphere	MGVAVVTVAAGGLPVIDVTATKPALGVPVTEAVNGRGIPVTKVSLAVGGVPVTYVATTLQREATS
Ga0070672_1014513401	3300005543	Miscanthus Rhizosphere	MGLAVVTVASGGMPVVDVTAVAPKLGVPVTEAANGCGIAVTKVTGGKPGLPVIFVVPPL*
Ga0066903_1000018008	3300005764	Tropical Forest Soil	MATPVVTVAAGGIPVVDVTSIAPKTGMPVTEAANGLGVAVTKVVGKPGLPVVYATTPP*
Ga0066903_1001811133	3300005764	Tropical Forest Soil	MPLPVVTVASGGLPVVDVTATPPNTGLPVKEAANGRGIAVTKVTGKPGLPVVYAP*
Ga0068863_1006384501	3300005841	Switchgrass Rhizosphere	MGQPVVTVAAGGLPVVDVTSVAPKTGLPVTEAANGYGIAVTKVVGKPGLPVVYGPP*
Ga0081455_100338456	3300005937	Tabebuia Heterophylla Rhizosphere	MAVAVVTVASGGLPVVDVTATFPKNGMAVTEAANGRGIPVTKVTPIVVGGRGGIAVTFVVPAIGNP*
Ga0074062_117315842	3300006606	Soil	MPLPVVTTAKGGIPVVDVTAVAPKIGLPVREAANGYGVAVTKVASGGTPVVYS*
Ga0075433_116823392	3300006852	Populus Rhizosphere	MSTPVVTVAAGGIAVVDVTATTPKLGLPVSEAANGRGVAVTKVTAGKPGLAVTFVVPPP*
Ga0075425_1019593372	3300006854	Populus Rhizosphere	MGLAVVTVASGGLPVVDVTATTPTRGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL*
Ga0075424_1003767503	3300006904	Populus Rhizosphere	MGLAVVTVASGGLPVVDVTATTPTRGVSVTEATNGRGIAVTKVVAKPGLPVTFVVPPL*
Ga0074063_102300331	3300006953	Soil	GNRRATETENKMSLPVVTVASGGLPVVDVTAIAPRTGLPVIEATNGRGIAVTKVVGKPGLPVVYG*
Ga0105098_102597032	3300009081	Freshwater Sediment	MGMPVVTVAAGGMPVVDVSAIAPRTGMPVTEAANGRGVAVTKVVGKPGMPVVYVAATVQ*
Ga0105240_110530871	3300009093	Corn Rhizosphere	VASGGMPVADVTATTPKLGMAISEAANGKGIAVTKVAAGKPGLAVVYVVPPP*
Ga0111539_100473944	3300009094	Populus Rhizosphere	MSTPVVTVATGGMPVVDVTATTPKLGLPVTEATNGYGLAVTKVVGKPGLAVTFTVPPSP*
Ga0111539_102441534	3300009094	Populus Rhizosphere	MALPVVTVASGGLPVVEVTNGRGLPVTEATNGRGLPVTKVTGGKPGLPVIYVP*
Ga0111539_108683722	3300009094	Populus Rhizosphere	VNDMALAVVTVAAGGLPVVDVTATKPLLGMPVTEAANGYGVAVTKVVGKPGLPVTFVVPPL*
Ga0105245_123998732	3300009098	Miscanthus Rhizosphere	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEATNGRGIAVTKVSLAIGGLPVTFVAATIQMASDGGIDR
Ga0105247_102218511	3300009101	Switchgrass Rhizosphere	MGLAVVTVASGGLPVVDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVP
Ga0105091_100644652	3300009146	Freshwater Sediment	MGMPVVTVAAGGVPVVDVSAIAPRTGMPVTEAANGRGVAVTKVVGKPGMPVVYVAATVQ*
Ga0105091_105745161	3300009146	Freshwater Sediment	MALPVVTVAAGGLAVVDVTATKPALGAPVSEVAGGRGTPVTKVVGKPGLAVTFVVPAVGRP*
Ga0105243_112416882	3300009148	Miscanthus Rhizosphere	MALPVVTVAAGGRPVVDVTATTPKLGLGVSEAANGRGVPVTKVTAPAAGLAVTYVVPPP*
Ga0105104_100182992	3300009168	Freshwater Sediment	MALPVVTVAAGGLAVVDVTATTPALGAPVSEAAAGRGTPVTKVVGKPGLPVTFVVPTVARP*
Ga0105104_100879583	3300009168	Freshwater Sediment	MGMPVVTVAAGGLPVVDVTAIAPRTGLPVTEAANGRGVPVTKVTGKPGLPVVFVVPPLL*
Ga0105242_100293053	3300009176	Miscanthus Rhizosphere	MALAVVTVASGGMPVADVTATTPKLGMAVSEAANGRGIAVTKVAAGKPGLAVVYVVPPP*
Ga0105242_107449693	3300009176	Miscanthus Rhizosphere	MGMPVVTVPSGGIPVVDVTATTPKLGFPVTEAANKYGVAVTKVAAGKLGLAVTYVVPPL*
Ga0105248_119758611	3300009177	Switchgrass Rhizosphere	MGMPVVTVAAGGLPVVDVTAIAPRTGLPVTEAANGRGVPVTKVTGKPGL
Ga0114942_11549632	3300009527	Groundwater	MGIPVVTVASGGMPVVDVSAIAAMTPIKYGLPVTEALNGMGVAVTLVVDKPGLPVIFVVPPL*
Ga0105249_129784441	3300009553	Switchgrass Rhizosphere	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEATNGRGIAVTKVSLAIGGLPVTFVAAT
Ga0105259_10306783	3300009597	Soil	MGMAVVTVASGGMPVVDVTPIASMTPIKYGTPVTEAANGKGVAVTKVVGKPGLPVIYVVPPL*
Ga0105340_10436493	3300009610	Soil	MGMAVVTVASGGMPVVDVTPIASMTPNKYGVAVTEAANGKGVPVTKVVGKPGTPVVYVVPPL*
Ga0126382_117590352	3300010047	Tropical Forest Soil	MGMPVVTKASGGLPVIDVSATTKVGLPVSEAANGYGRAVTKVTSGGMPVVYTTAPLLRETDGQVD
Ga0126370_113134152	3300010358	Tropical Forest Soil	LPVVDVTADAGAPQKFGVPVSEAANGFGVPVTKVTPPKGGTPVIYVTPPP*
Ga0126377_129094811	3300010362	Tropical Forest Soil	MAMPVVTVAAGGIPVVDVTAVAPKTGLPVTEAANGRGVAVTKQTGGKPGMPVVYS*
Ga0126381_1004852273	3300010376	Tropical Forest Soil	MALPVVTVASGGLAVVDVTAGSKVGLPVTEATNARGIAVTKVVPDPVTGKPAGMPVVYV*
Ga0134124_104792173	3300010397	Terrestrial Soil	VALAVVTVASGGMPVADVTATTPKLGMAVSEAANGRGIAVTKVAAGKPGLAVVYVVPPP*
Ga0134124_111225001	3300010397	Terrestrial Soil	VALAVVTVASGGMPVADVTATTPKLGMAISEAANGKGIAVTKVAAGKPGLAVVYVVPP
Ga0126383_108378262	3300010398	Tropical Forest Soil	MALAVVTVASGGLPVVDVTSTTPTYGMAVSEASNGRGIAVTKQTGGKGGLAVTYVVPAIGNP*
Ga0134123_115330803	3300010403	Terrestrial Soil	MATPVVTVAAGGLPVVDVTSLAPKLGLPVTEALNGRGIAVTKVAANGLPVT
Ga0105246_114880222	3300011119	Miscanthus Rhizosphere	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEATNGRGIAVTKVGLAIGGLPVTFVAATIQTASDGGINRSRAGEVARQAS
Ga0137312_10191272	3300011400	Soil	MGMAVVTVASGGMPVVDVTPIASMTPIKYGTPVTEAANGYGIAVTKVVGKPGLPVIYVVPPL*
Ga0137312_10340852	3300011400	Soil	MGIPVVTVAAGGMPVVDVTATKPNLGVPVTEATNKYGRPVTKVVGKPGLPVTFVVPPL*
Ga0137340_10974771	3300011405	Soil	MGMAVVTVASGGMPVVDVTPIASMTPIKYGTPVTEAANGKGVAVTKVPKYGMPVIYVVPPL*
Ga0137424_10004824	3300011412	Soil	MGMAVVTVASGGMPVVDVTPIASMTPIKYGTPVTEAANGKGIRVTKVPKYGMPVIYVVPPL*
Ga0137424_10009875	3300011412	Soil	MGMPVVTVAAGGMPVVDVTPIASMTPIKYGTPVTEAANGKGVAVTKVPKYGMPVIYVVPPL*
Ga0137424_10038972	3300011412	Soil	MGIPVVTVVTGGMPVVDVTATKPNLGVPVTEATNGYGRPVTKVVGKPGMPVTFVVPPL*
Ga0137424_10106842	3300011412	Soil	MALAVVTVATGGLPVVDVTATTPKLGAPVSEAPRGIAVTKVVGKPGLAVTFVVPPP*
Ga0137325_10250892	3300011415	Soil	MGMPVVTVAAGGMPVVDVTSIAPRTGVPVTKVVGKPGMPVVYVVAPL*
Ga0137325_10521662	3300011415	Soil	MGMPVVTVAAGGMPVVDVTATTPKLGVPVSEAARGVAVTKVVGKPGLPVTFV
Ga0137325_10683932	3300011415	Soil	MAVVTVASGGMPVVDVTPIASMTPVKYGTPVTEAANGKGVAVTKVPKYGMPVIYVVPPL*
Ga0137326_10658353	3300011417	Soil	MGMPVVTVAAGGMPVVDVTPIASMTPIKYGTPVTEAANGKGIRVTKVPKYGMPVIYVVPPL*
Ga0137314_10107485	3300011420	Soil	MGMAVVTVASGGMPVVDVTPIASMTPIKYGTPVTEAANGKGIAVTKVVGKPGLPVIYVVPPL*
Ga0137425_10139553	3300011422	Soil	PVVDVTATTPKLGAPVSEAPRGIAVTKVVGKPGLAVTFVVPPP*
Ga0137425_10619763	3300011422	Soil	MGMPVVTVAAGGMPVVDVTSIAPRTGVPVTEAANGRGVPVTKVVGKPGMPVVYVVAPL*
Ga0137455_10368931	3300011429	Soil	MATPVVTVAAGGLPVVDVTATTPKFGAPVTEAAAGKGTSVTKVAALGVPVTFVVPPP*
Ga0137428_10206772	3300011432	Soil	MGMPVVTVAAGGMPVVDVTPIASMTPIKYGTPVTEAANGKGTPVTKVVGKPGLPVVYVVPPL*
Ga0137451_100014315	3300011438	Soil	MAFAVVTVAAGGLPVVDVTATKPLLGMPVTEATRGLAVTKGSVGLPVTFIVVSTTGGNPK
Ga0137451_10365594	3300011438	Soil	MATPVVTVASGGLPVVDVTATTPKYGLPVTEATRGIAVTKVASRGTPVSFVSATG
Ga0137432_10161074	3300011439	Soil	MGMPVVTVAAGGMPVVDVTATTPKLGVPVSEAARGVAVTKVVGKPGLPVTFVVPPP*
Ga0137433_12188352	3300011440	Soil	MGIPVVTVAAGGMPVVDVTATKPNLGVPVTEATNGYGRPVTKVVGKPGLPVTFVVPPL*
Ga0137457_11777172	3300011443	Soil	MALAVVTVATGGLPVVDVTATTPKLGLPVSEAPRGIAVTKVVGKPGLAVTFVVPPP*
Ga0137332_10305382	3300012122	Soil	MAVVTVASGGMPVVDVTPIASMTPIKYGTPVTEAANGKGIRVTKVPKYGMPVIYVVPPL*
Ga0150985_1125290842	3300012212	Avena Fatua Rhizosphere	MATPVVTVAAGGLPVVETPLGKPVSEAANGFGVAVTKVIGGKPGLPVVYVAAVGPLKGSG
Ga0157298_100176234	3300012913	Soil	MGLAVVTVAAGGLPVIDVTATTPKLGIPVSEAANGRGIAVTKVTLPKGGIPVTFVVPPL*
Ga0126369_108757213	3300012971	Tropical Forest Soil	VAAGGIPVVDVTSIAPKTGMPVTEAANGLGVAVTKVVGKPGLPVVYATTPP*
Ga0164309_102017803	3300012984	Soil	MPLPVVTTAKGGIPVVDVTAVAPKTGLPVREAANGYGVAVTKVASGGTPVVYS*
Ga0163162_112519602	3300013306	Switchgrass Rhizosphere	MALPVVTVAAGGRPVVDVTATTPKLGLGVSDAADGRGVPVTKVTAPAAGLAVTYVVPPP*
Ga0157375_100429382	3300013308	Miscanthus Rhizosphere	MALPVVTVAAGGLPVVDVSATTPKLGLGVSEAANGRGVPVTKVTAPAAGLAVTYVVPPP*
Ga0157375_132676482	3300013308	Miscanthus Rhizosphere	MGVPVVTVPSGGIPVVDVTATAPKQGLPVTEAANKYGIAVTKVAAGRLGLAVTYVVPPL*
Ga0157376_108850862	3300014969	Miscanthus Rhizosphere	MGVPVVTVATGGIPVVDVTATAPKQGLPVTESTSTPKYGIKVTKVAAGQLGLAVTYVVPPL*
Ga0157376_119611333	3300014969	Miscanthus Rhizosphere	EQEEVMGLAVVTVASGGLPVVDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL*
Ga0173483_100241365	3300015077	Soil	MGMPVVTVAAGGMPVVDVTATKPGLGMPVTEAANKYGVAVTKVAVYGLPVTFVAPPLVSRETNDS
Ga0132258_100746437	3300015371	Arabidopsis Rhizosphere	MGMSVVTVAAGGMPVVDVTATKPGLGMPVIEAANKYGVAVTKVAVYGLPVTFVSPPP*
Ga0132256_1019216503	3300015372	Arabidopsis Rhizosphere	MAQPVVTVASGGLPVVDVTGVSPKIGMAVSEATRGIAVTKVVGKPGLPVVYVVPPP*
Ga0163161_101154263	3300017792	Switchgrass Rhizosphere	MALPVVTVAAGGRPVVDVTATTPKLGLGVSEAANGRGVPVTKVTAPAAGLAVTYVVPPP
Ga0163161_107485621	3300017792	Switchgrass Rhizosphere	MALAVVTVASGGLPVVDVTSTTPQFGMPVSEVANGFGVPVTKVTAPLQGLPVLYAVDAGGGG
Ga0190266_1000003213	3300017965	Soil	MGMAVVTVASGGMPVVDVTPIASMTPNKYGVAVTEAANGKGVPVTKVVGKPGTPVVYVVPPL
Ga0190266_100048592	3300017965	Soil	MGVAVVTVASGGLPVVDVTPIASMTPIKYGLAVTEAANKYGIAVTKVVGAPGLPVIYVVPPL
Ga0190266_101486621	3300017965	Soil	MALPVVTVAAGGLPVIDVTATAPRLGLPVTEASNGRGTAVTKVAANGLPVTYSTV
Ga0184634_100366362	3300018031	Groundwater Sediment	MGLAVVTVAAGGLPVVDVTATTPKLGMPVTEAANGRGVAVTKVVGKPGLPVTFVVPPL
Ga0184611_11002082	3300018067	Groundwater Sediment	MALPVVTVAAGGLAVVDVTATKPALGAPVSEVAGGRGTPVTKVTGKPGLAVTFVVPAVGR
Ga0184611_11747832	3300018067	Groundwater Sediment	MGMPVVTVAAGGLPVVDVTAIAPRTGLPVTEAANGRGVPVTKVTGKPGLPVVFVVPPLL
Ga0184625_102942732	3300018081	Groundwater Sediment	MAWPVVTVAAGGLPVIDVTGTFPRLGVPVSEAANGRGTPVTKVVAPRMALAVTFVVPPL
Ga0184628_102187582	3300018083	Groundwater Sediment	MGLPVVTVATGGIPVVDVTATSPKLGFPVTEAANKYGIAVTKVAAGQLGLAVTYVSPPL
Ga0184628_105046561	3300018083	Groundwater Sediment	VGLPVVTVASGGMPVVEAANGYGTPVSEAANKFGIPVTKVVGKPGLPVIFVVPPLRRGSP
Ga0190270_100006353	3300018469	Soil	MGMAVVTVASGGVPVVDVTPIASMTPIKYGVAVTEVAAGKGVAVTKVVGKPGLPVIYVVPPL
Ga0190270_102644943	3300018469	Soil	MGMPVVTVAAGGMPVVDVTSIAPRTGVPVTEAANGRGVPVTKVVGKPGMPVVYVVAPL
Ga0190274_115115742	3300018476	Soil	MGLAVVTVPAGGLPVIDVTATKPSLGFPVTEATNGNGIAVTKVVTNGVPVTFVVPPL
Ga0190274_121920303	3300018476	Soil	SGGMPVVDVTAIAPRSGLPVTEAANGCGIAVTKVTGGKPGLPVIFVVPPL
Ga0190271_137606871	3300018481	Soil	MGLAVVTVAAGGLPVVDVTATTPKLGLPVTEAANGRGIPVTKVTLPKGGLPVTFVVPPP
Ga0210406_109260421	3300021168	Soil	CSRRCIEEGAMAKAVVTVAAGGLPVVDMTATKPGLGLPVSEAASGIGLRVTKVIAPAAGLAVSYVVPPP
Ga0210392_101296173	3300021475	Soil	MAKAVVTVAAGGLPVVDMTATKPGLGLPVSEAASGIGLRVTKVIAPAAGLAVSYVVPPP
Ga0247746_10010684	3300022886	Soil	MGLAVVTVASGGMPVVDVTAIAPRSGLPVTEAANGCGIAVTKVTGGKPGLPVIFVVPPL
Ga0247779_10392193	3300022908	Plant Litter	MGIPVVTVATGGVPVVDVTATAPKQGLPVTEAANGYGIRVTKVAAGQLGLAVTFVVPPL
Ga0247791_10174603	3300023062	Soil	MGLAVVTVASGGLPVVDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL
Ga0247799_10406501	3300023072	Soil	MGMPVVTVAAGGMPVVDVTATKPDLGMPVTEAANKYGVAVTKVAVYGLPVTFVAPPLVSRETNDSE
Ga0247762_10331523	3300023169	Plant Litter	MGLAVVTVAAGGLPVIDVTATTPKLGIPVSEAANGRGIAVTKVTLPKGGIPVTFVVPPL
Ga0247800_10348452	3300023263	Soil	MGMPVVTVAAGGLPVVDVTAIAPRTGLPVTEAANGRGVPVTKVTGKPGLPVVFVVPPLRA
Ga0247686_10011432	3300024177	Soil	MATPVVTIASGGLPVVETPLGKPVSEAANGRGTPVTKVVGKPGLPVVYVVAAGPLKGSG
Ga0247686_10217062	3300024177	Soil	MAMPVVSVASGGLPVVETPLGKPVSEAANGRGVAVTKVVGRPGLPVVYVAAAGPLKGSG
Ga0247693_10263402	3300024181	Soil	MATPVVTIASGGLPVVETPLGKPVSEAANGRGVAVTKVIGKPGLPVVYVAAAGPLKGSG
Ga0247664_10577252	3300024232	Soil	MSTPVVTVASGGMPVVDVTATVPLRGMAVTEALNGRGIAVTKVAGGGIPVTFVVVSTTGGNPK
Ga0247680_10523812	3300024246	Soil	MGQPVVTVAAGGLPVVDVTSVAPKTGLPVTEAANGYGIAVTKVVGKPGLPVVYVVPPL
Ga0247679_10692102	3300024251	Soil	MGQPVVTVAAGGLPVVDVTSVAPKTGLPVTEAANGYGIAVTKVTGKPGLPVVYTAP
Ga0207680_102845751	3300025903	Switchgrass Rhizosphere	LAVVTVASGGLPVVDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL
Ga0207671_101966163	3300025914	Corn Rhizosphere	VALAVVTVASGGMPVADVTATTPKLGMAISEAANGKGIAVTKVAAGKPGLAVVYVVPPP
Ga0207662_101108174	3300025918	Switchgrass Rhizosphere	VVTVASGGLPVFDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL
Ga0207701_105245971	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEATNGRGIAVTKVGLAIGGLPVTF
Ga0207686_1000021865	3300025934	Miscanthus Rhizosphere	MALAVVTVASGGMPVADVTATTPKLGMAVSEAANGRGIAVTKVAAGKPGLAVVYVVPPP
Ga0207686_104296042	3300025934	Miscanthus Rhizosphere	MPVVTVPSGGIPVVDVTATTPKLGFPVTEAANKYGVAVTKVAAGKLGLAVTYVVPPL
Ga0207709_113080971	3300025935	Miscanthus Rhizosphere	RTQAEEGYTAPQTGEQEEVMGLAVVTVASGGLPVVDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL
Ga0207669_101365012	3300025937	Miscanthus Rhizosphere	MGVPVVTVPSGGIPVVDVTATTPKLGFPVTEAANKYGIAVTKVAAGKLGLAVTYVVPPL
Ga0207704_109615301	3300025938	Miscanthus Rhizosphere	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEATNGRGIAVTKVGLAIGGLPVT
Ga0207651_106252131	3300025960	Switchgrass Rhizosphere	EVMGLAVVTVASGGLPVVDVTATTPKLGVSVTEATNGRGIAVTKVVAKPGLAVTFVVPPL
Ga0207668_110900393	3300025972	Switchgrass Rhizosphere	MAIAVVTKASGGMPVIDVTATKPGLGVPVTEATNGRGIAVTKVSLAIGGLPVTFVAATIQTASDG
Ga0207641_100156851	3300026088	Switchgrass Rhizosphere	LAVVTVASGGMPVADVTATTPKLGMAISEAANGKGIAVTKVAAGKPGLAVVYVVPPP
Ga0207641_105159074	3300026088	Switchgrass Rhizosphere	MGQPVVTVAAGGLPVVDVTSVAPKTGLPVTEAANGYGIAVTKVVGKPGLPVVYGPP
Ga0207683_109320732	3300026121	Miscanthus Rhizosphere	MPMGIPVVTKASGGLPVIDVTATKPGLGVPVTEAANGKGIAVTKVSLAIGGLPVTFTA
Ga0208454_10963033	3300027573	Soil	VVDVTPIASMTPIKYGTPVTEAANGKGIAVTKVVGKPGLPVIYVVPPL
Ga0209077_10622322	3300027675	Freshwater Sediment	MGMPVVTVAAGGVPVVDVSAIAPRTGMPVTEAANGRGVAVTKVVGKPGMPVVYVAATVQ
Ga0209593_100619573	3300027743	Freshwater Sediment	MALPVVTVAAGGLAVVDVTATTPALGAPVSEAAAGRGTPVTKVVGKPGLPVTFVVPTVAR
Ga0207428_1000413824	3300027907	Populus Rhizosphere	MSTPVVTVATGGMPVVDVTATTPKLGLPVTEATNGYGLAVTKVVGKPGLAVTFTVPPSP
Ga0207428_102640043	3300027907	Populus Rhizosphere	MSTPVVTVAAGGIAVVDVTATTPKLGLPVSEAANGRGVAVTKVTAGKPGLAVTFVVPPP
Ga0207428_105597262	3300027907	Populus Rhizosphere	MALAVVTVAAGGLPVVDVTATKPLLGMPVTEAANGYGVAVTKVVGKPGLPVTFVVPPL
Ga0247684_10014714	3300028138	Soil	MGQPVVTVAAGGLPVVDVTSVAPKTGLPVTEAANGYGIAVTKVTGKPGLPVVYVVPPL
Ga0247684_10191503	3300028138	Soil	VALAVVTVASGGMPVADVSATTPKLGMAVSEATKGIAVTKVAAGKPGLAVVYVVPPP
Ga0247818_108800792	3300028589	Soil	MGMPVVTVATGGMPVVDVTATKPLLGVAVTEVANGRGVAVTKVTGKPGLPVTFVVPPL
Ga0307503_102867052	3300028802	Soil	MGLAVVTVAAGGLAVIDVTATTPKLGVPVTEAANGKGIPVTKVTLPKGGLPVTFVVPPL
Ga0307503_109134162	3300028802	Soil	MGLPVVTVAAGGLPVVDVTATTPKFGVPVTEAANGRGIAVTKVVGKPGMPVTFVVPPL
Ga0307281_100868782	3300028803	Soil	MATPVVTVAAGGLPVVDVTATTPKFGAPVTEAAAGKGTSVTKVAALGVPVTFVVPPP
Ga0307498_104432861	3300031170	Soil	MAFPVVTVASGGLPVVDVTATTPKLGVPVSEAANGRGIAVTKVTLPRGGLPVTYVVPPP
Ga0307506_100151362	3300031366	Soil	MGLAVVTVAAGGLPVVDVTATTPKLGVSVTEAANGRGIAVTKVVGKPGMPVTFVVPPL
Ga0310813_101964693	3300031716	Soil	VALAVVTVASGGMPVADVSATTPKLGMAISEAANGKGIAVTKVAAGKPGLAVVYVVPPP
Ga0307469_100017623	3300031720	Hardwood Forest Soil	MAIPVVTVAAGGLPVVNVTATTGIGLPVREAANGRGIAVTQVVGKPGLPVVYVVSAGPL
Ga0307473_104601573	3300031820	Hardwood Forest Soil	MAAPQAALPVVMVAAGGLPVVGVAAGLPVTEAANGKGLAVTLVTAPKGGLGVTYVVPG
Ga0307479_101204652	3300031962	Hardwood Forest Soil	MGMPVVTVAAGGLAVIDVTAVAPKTGTPVEEASNGFGRAITKVTSRGIPVVYVTAPLVRAENGQADRG
Ga0306924_126372651	3300032076	Soil	MGWPVVTIAAGGLPVVDVSATTKIGMPVSEASNKFGVAVTKVAQYGMPVVYVGAPLLAQK
Ga0307471_1026180692	3300032180	Hardwood Forest Soil	MPVASVPVVTLASGGLPVVEVAAGKLALPVTEATNGRGLAVTKVTLPKGGLAVVYVAPG
Ga0364925_0144949_56_238	3300034147	Sediment	MAVVTVASGGMPVVDVTPIASMTPVKYGTPVTEAANGKGVAVTKVVGKPGLPVIYVVPPL
Ga0364927_0214070_279_467	3300034148	Sediment	MGMAVVTVAAGGLPVVDVTPIASMTPIKYGTPVTEAANGKGTPVTKVVGKPGLPVVYVVPPL
Ga0364933_135705_3_158	3300034150	Sediment	MGMPVVTVAAGGMPVVEVATGGMPVDEATNGYGIPVTKVVGKPGMPVKYGAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039120

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences