Metagenome / Metatranscriptome Family F039038

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039038
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	84 residues
Representative Sequence	MTYISHREILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Number of Associated Samples	149
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.83 %
% of genes near scaffold ends (potentially truncated)	39.02 %
% of genes from short scaffolds (< 2000 bps)	76.83 %
Associated GOLD sequencing projects	135
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.073 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (39.024 % of family members)
Environment Ontology (ENVO)	Unclassified (40.854 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (47.561 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.92% β-sheet: 0.00% Coil/Unstructured: 39.08%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF00463	ICL	43.90
PF02201	SWIB	18.29
PF02775	TPP_enzyme_C	7.32
PF02776	TPP_enzyme_N	4.27
PF10431	ClpB_D2-small	3.05
PF07973	tRNA_SAD	2.44
PF02824	TGS	1.22
PF05198	IF3_N	1.22
PF02391	MoaE	0.61
PF03447	NAD_binding_3	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG2224	Isocitrate lyase	Energy production and conversion [C]	43.90
COG5531	DNA-binding SWIB/MDM2 domain	Chromatin structure and dynamics [B]	18.29
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	1.22
COG0314	Molybdopterin synthase catalytic subunit MoaE	Coenzyme transport and metabolism [H]	0.61

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.07 %
Unclassified	root	N/A	32.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.07 %
Unclassified	root	N/A	32.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.07 %
Unclassified	root	N/A	32.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.27 %
Unclassified	root	N/A	32.93 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	36.59 %
Unclassified	root	N/A	32.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.66 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	36.59 %
Unclassified	root	N/A	32.93 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	3.66 %

Name	Rank	Taxonomy	Distribution
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	35.37 %
Unclassified	root	N/A	32.93 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	3.66 %

Name	Rank	Taxonomy	Distribution
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	35.37 %
Unclassified	root	N/A	32.93 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	3.66 %

Name	Rank	Taxonomy	Distribution
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	35.37 %
Unclassified	root	N/A	32.93 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	3.66 %

Name	Rank	Taxonomy	Distribution
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	35.37 %
Unclassified	root	N/A	32.93 %
Pseudomonas syringae group genomosp. 2	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2	3.66 %

Name	Rank	Taxonomy	Distribution
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	35.37 %
Unclassified	root	N/A	32.93 %
Pseudomonas savastanoi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	3.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000736\|JGI12547J11936_1003789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4195	Open in IMG/M
3300000882\|FwDRAFT_10026472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1249	Open in IMG/M
3300000929\|NpDRAFT_10047610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3709	Open in IMG/M
3300002408\|B570J29032_108761561	Not Available	504	Open in IMG/M
3300003277\|JGI25908J49247_10010338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2908	Open in IMG/M
3300003388\|JGI25910J50241_10072473	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300003393\|JGI25909J50240_1004621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3490	Open in IMG/M
3300003394\|JGI25907J50239_1118869	Not Available	513	Open in IMG/M
3300003412\|JGI25912J50252_10013138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2723	Open in IMG/M
3300003413\|JGI25922J50271_10001937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5991	Open in IMG/M
3300003429\|JGI25914J50564_10007120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3636	Open in IMG/M
3300003616\|JGI25928J51866_1008862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2926	Open in IMG/M
3300004789\|Ga0007752_10154570	Not Available	693	Open in IMG/M
3300004792\|Ga0007761_10126840	Not Available	526	Open in IMG/M
3300004810\|Ga0007757_10062184	Not Available	536	Open in IMG/M
3300005517\|Ga0070374_10249583	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005517\|Ga0070374_10390401	Not Available	700	Open in IMG/M
3300005582\|Ga0049080_10263472	Not Available	560	Open in IMG/M
3300005583\|Ga0049085_10019148	All Organisms → cellular organisms → Bacteria → Proteobacteria	2602	Open in IMG/M
3300006805\|Ga0075464_10098799	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300006805\|Ga0075464_10508393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	738	Open in IMG/M
3300007545\|Ga0102873_1219964	Not Available	570	Open in IMG/M
3300007545\|Ga0102873_1222094	Not Available	567	Open in IMG/M
3300007546\|Ga0102874_1054655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1286	Open in IMG/M
3300007547\|Ga0102875_1073850	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300007547\|Ga0102875_1134771	Not Available	780	Open in IMG/M
3300007548\|Ga0102877_1116263	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300007548\|Ga0102877_1182189	Not Available	592	Open in IMG/M
3300007548\|Ga0102877_1209445	Not Available	549	Open in IMG/M
3300007549\|Ga0102879_1087629	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300007549\|Ga0102879_1094237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	934	Open in IMG/M
3300007549\|Ga0102879_1138589	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300007550\|Ga0102880_1006342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3328	Open in IMG/M
3300007553\|Ga0102819_1041272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	781	Open in IMG/M
3300007557\|Ga0102821_1018847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1869	Open in IMG/M
3300007558\|Ga0102822_1130958	Not Available	592	Open in IMG/M
3300007561\|Ga0102914_1113891	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300007585\|Ga0102916_1181847	Not Available	570	Open in IMG/M
3300007593\|Ga0102918_1232217	Not Available	563	Open in IMG/M
3300007597\|Ga0102919_1236120	Not Available	570	Open in IMG/M
3300007600\|Ga0102920_1174391	Not Available	690	Open in IMG/M
3300007606\|Ga0102923_1039995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1473	Open in IMG/M
3300007617\|Ga0102897_1136419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	749	Open in IMG/M
3300007618\|Ga0102896_1063057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1227	Open in IMG/M
3300007618\|Ga0102896_1121798	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300007624\|Ga0102878_1027251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1794	Open in IMG/M
3300007625\|Ga0102870_1175991	Not Available	612	Open in IMG/M
3300007627\|Ga0102869_1021698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1810	Open in IMG/M
3300007629\|Ga0102895_1170892	Not Available	565	Open in IMG/M
3300007630\|Ga0102903_1101100	Not Available	798	Open in IMG/M
3300007632\|Ga0102894_1167507	Not Available	583	Open in IMG/M
3300007644\|Ga0102902_1004836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3980	Open in IMG/M
3300007649\|Ga0102912_1006865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3160	Open in IMG/M
3300007649\|Ga0102912_1236819	Not Available	524	Open in IMG/M
3300007653\|Ga0102868_1050705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	911	Open in IMG/M
3300007670\|Ga0102862_1019319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1566	Open in IMG/M
3300007706\|Ga0102899_1186603	Not Available	521	Open in IMG/M
3300007708\|Ga0102859_1220552	Not Available	566	Open in IMG/M
3300007716\|Ga0102867_1217957	Not Available	528	Open in IMG/M
3300007860\|Ga0105735_1002172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2504	Open in IMG/M
3300007972\|Ga0105745_1037746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1288	Open in IMG/M
3300007974\|Ga0105747_1110247	Not Available	865	Open in IMG/M
3300007992\|Ga0105748_10283176	Not Available	701	Open in IMG/M
3300008052\|Ga0102893_1037762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1474	Open in IMG/M
3300008995\|Ga0102888_1060161	Not Available	742	Open in IMG/M
3300008996\|Ga0102831_1137355	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300009024\|Ga0102811_1068842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1330	Open in IMG/M
3300009051\|Ga0102864_1018910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1789	Open in IMG/M
3300009056\|Ga0102860_1040241	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300009058\|Ga0102854_1233409	Not Available	528	Open in IMG/M
3300009059\|Ga0102830_1132901	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300009068\|Ga0114973_10524545	Not Available	612	Open in IMG/M
3300009151\|Ga0114962_10077676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2111	Open in IMG/M
3300009152\|Ga0114980_10740620	Not Available	549	Open in IMG/M
3300009155\|Ga0114968_10470581	Not Available	678	Open in IMG/M
3300009158\|Ga0114977_10120247	All Organisms → cellular organisms → Bacteria → Proteobacteria	1583	Open in IMG/M
3300009159\|Ga0114978_10127002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1660	Open in IMG/M
3300009164\|Ga0114975_10169385	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300009180\|Ga0114979_10741713	Not Available	554	Open in IMG/M
3300009185\|Ga0114971_10028208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3604	Open in IMG/M
3300009185\|Ga0114971_10800090	Not Available	511	Open in IMG/M
3300009684\|Ga0114958_10267845	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300010309\|Ga0102890_1008998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2002	Open in IMG/M
3300010312\|Ga0102883_1113687	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300011009\|Ga0129318_10001971	Not Available	3387	Open in IMG/M
3300011995\|Ga0153800_1027060	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300012345\|Ga0157139_1000890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1300	Open in IMG/M
3300012665\|Ga0157210_1011354	All Organisms → cellular organisms → Bacteria → Proteobacteria	1559	Open in IMG/M
3300013004\|Ga0164293_10924066	Not Available	548	Open in IMG/M
3300018815\|Ga0187845_1210304	Not Available	623	Open in IMG/M
3300020151\|Ga0211736_10936713	All Organisms → cellular organisms → Bacteria → Proteobacteria	1405	Open in IMG/M
3300020159\|Ga0211734_10635544	All Organisms → cellular organisms → Bacteria → Proteobacteria	1467	Open in IMG/M
3300020172\|Ga0211729_10671272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3113	Open in IMG/M
3300020495\|Ga0208720_1004094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2158	Open in IMG/M
3300020512\|Ga0207936_1003225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2996	Open in IMG/M
3300020537\|Ga0208722_1030640	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300020563\|Ga0208082_1038051	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300020565\|Ga0208718_1084027	Not Available	569	Open in IMG/M
3300021108\|Ga0214162_1043413	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300021336\|Ga0210307_1339131	Not Available	590	Open in IMG/M
3300021516\|Ga0194045_1073115	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300021519\|Ga0194048_10070526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1376	Open in IMG/M
3300021600\|Ga0194059_1228689	Not Available	557	Open in IMG/M
3300021961\|Ga0222714_10590624	Not Available	556	Open in IMG/M
3300021963\|Ga0222712_10624468	Not Available	619	Open in IMG/M
3300023184\|Ga0214919_10671081	Not Available	594	Open in IMG/M
3300024343\|Ga0244777_10336156	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300024346\|Ga0244775_10107860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2364	Open in IMG/M
3300024348\|Ga0244776_10017418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	6007	Open in IMG/M
3300024348\|Ga0244776_10439051	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300024862\|Ga0256317_1005038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2436	Open in IMG/M
3300025451\|Ga0208426_1051725	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300025896\|Ga0208916_10032454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2103	Open in IMG/M
3300027084\|Ga0208443_1096227	Not Available	565	Open in IMG/M
3300027124\|Ga0255116_1023023	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300027127\|Ga0255071_1029376	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300027128\|Ga0255099_1030975	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300027139\|Ga0255082_1017693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1198	Open in IMG/M
3300027143\|Ga0255105_1000244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	14796	Open in IMG/M
3300027145\|Ga0255114_1005918	All Organisms → cellular organisms → Bacteria → Proteobacteria	2741	Open in IMG/M
3300027147\|Ga0255113_1000539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	11253	Open in IMG/M
3300027152\|Ga0255100_1076883	Not Available	591	Open in IMG/M
3300027153\|Ga0255083_1074028	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300027205\|Ga0208926_1019683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1017	Open in IMG/M
3300027212\|Ga0208554_1011354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1439	Open in IMG/M
3300027221\|Ga0208557_1042796	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300027227\|Ga0208929_1043324	All Organisms → cellular organisms → Bacteria → Proteobacteria	959	Open in IMG/M
3300027232\|Ga0208803_1089070	Not Available	536	Open in IMG/M
3300027235\|Ga0208804_1005690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1439	Open in IMG/M
3300027244\|Ga0208173_1008203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2185	Open in IMG/M
3300027246\|Ga0208931_1006378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2652	Open in IMG/M
3300027320\|Ga0208923_1027982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1002	Open in IMG/M
3300027489\|Ga0255095_1055811	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300027529\|Ga0255077_1017974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1271	Open in IMG/M
3300027531\|Ga0208682_1003659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4457	Open in IMG/M
3300027594\|Ga0255120_1009685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2162	Open in IMG/M
3300027595\|Ga0255122_1055667	Not Available	674	Open in IMG/M
3300027596\|Ga0255119_1022835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1308	Open in IMG/M
3300027608\|Ga0208974_1005769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4233	Open in IMG/M
3300027720\|Ga0209617_10055893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1649	Open in IMG/M
3300027733\|Ga0209297_1079688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1431	Open in IMG/M
3300027757\|Ga0208671_10009952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3626	Open in IMG/M
3300027763\|Ga0209088_10375628	Not Available	555	Open in IMG/M
3300027764\|Ga0209134_10004671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3995	Open in IMG/M
3300027777\|Ga0209829_10104513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1366	Open in IMG/M
3300027782\|Ga0209500_10013205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5016	Open in IMG/M
3300027797\|Ga0209107_10288479	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300027808\|Ga0209354_10015023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3087	Open in IMG/M
3300027892\|Ga0209550_10480145	Not Available	751	Open in IMG/M
3300027892\|Ga0209550_10823286	Not Available	518	Open in IMG/M
3300028393\|Ga0304728_1088114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1207	Open in IMG/M
3300031784\|Ga0315899_10353349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1440	Open in IMG/M
3300033980\|Ga0334981_0050359	All Organisms → cellular organisms → Bacteria → Proteobacteria	2172	Open in IMG/M
3300033984\|Ga0334989_0595747	Not Available	531	Open in IMG/M
3300033984\|Ga0334989_0626467	Not Available	512	Open in IMG/M
3300034020\|Ga0335002_0069984	All Organisms → cellular organisms → Bacteria → Proteobacteria	2465	Open in IMG/M
3300034022\|Ga0335005_0253760	All Organisms → cellular organisms → Bacteria → Proteobacteria	1065	Open in IMG/M
3300034050\|Ga0335023_0108742	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300034060\|Ga0334983_0185507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 2 → Pseudomonas savastanoi	1298	Open in IMG/M
3300034104\|Ga0335031_0397136	Not Available	868	Open in IMG/M
3300034104\|Ga0335031_0767723	Not Available	544	Open in IMG/M
3300034107\|Ga0335037_0363626	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300034110\|Ga0335055_0049201	All Organisms → cellular organisms → Bacteria → Proteobacteria	1956	Open in IMG/M
3300034167\|Ga0335017_0296203	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	53.05%
Marine	Environmental → Aquatic → Marine	46.95%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	39.02%
Lake	Environmental → Aquatic → Freshwater → Lake	23.17%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.29%
River	Environmental → Aquatic → Freshwater → River	9.15%
Coastal	Environmental → Aquatic → Marine → Coastal	5.49%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.61%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.61%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	39.02%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	23.17%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.80%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	9.15%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.49%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.88%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.83%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.61%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	39.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.37%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.76%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	9.15%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.54%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.66%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.05%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.44%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.44%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.83%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.83%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	1.22%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.22%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.22%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.61%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.61%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.61%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.61%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.61%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.61%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M
3300004789	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004792	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004810	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007553	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007558	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007627	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02	Environmental	Open in IMG/M
3300007629	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-3	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007632	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007649	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007860	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3um	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008995	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010309	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-3	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental	Open in IMG/M
3300012345	Freshwater microbial communities from Burnt River, Ontario, Canada - S22	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300018815	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_68	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020495	Freshwater microbial communities from Lake Mendota, WI - 20APR2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020512	Freshwater microbial communities from Lake Mendota, WI - 19NOV2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020537	Freshwater microbial communities from Lake Mendota, WI - 21SEP2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020563	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020565	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021108	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021516	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021600	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024862	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025451	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027084	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02 (SPAdes)	Environmental	Open in IMG/M
3300027124	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8h	Environmental	Open in IMG/M
3300027127	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8h	Environmental	Open in IMG/M
3300027128	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8d	Environmental	Open in IMG/M
3300027139	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8h	Environmental	Open in IMG/M
3300027143	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_8h	Environmental	Open in IMG/M
3300027145	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8h	Environmental	Open in IMG/M
3300027147	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027152	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8d	Environmental	Open in IMG/M
3300027153	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8h	Environmental	Open in IMG/M
3300027205	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3 (SPAdes)	Environmental	Open in IMG/M
3300027212	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 (SPAdes)	Environmental	Open in IMG/M
3300027221	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3 (SPAdes)	Environmental	Open in IMG/M
3300027227	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02 (SPAdes)	Environmental	Open in IMG/M
3300027232	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02 (SPAdes)	Environmental	Open in IMG/M
3300027235	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-3 (SPAdes)	Environmental	Open in IMG/M
3300027244	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02 (SPAdes)	Environmental	Open in IMG/M
3300027246	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027489	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8d	Environmental	Open in IMG/M
3300027529	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8h	Environmental	Open in IMG/M
3300027531	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02 (SPAdes)	Environmental	Open in IMG/M
3300027594	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepA_8h	Environmental	Open in IMG/M
3300027595	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepC_8h	Environmental	Open in IMG/M
3300027596	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8h	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12547J11936_10037893	3300000736	Freshwater And Sediment	MTYLSHYEILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK*
FwDRAFT_100264723	3300000882	Freshwater And Marine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
NpDRAFT_100476101	3300000929	Freshwater And Marine	MTYISHREILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
B570J29032_1087615612	3300002408	Freshwater	MYCISHSEILFLILRKNDAAQQVNISYCENKFQYQNACIERIESNKWPRLSNMNALREGYLQQQGEKIFTSPRKQRVS
JGI25908J49247_100103382	3300003277	Freshwater Lake	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK*
JGI25910J50241_100724731	3300003388	Freshwater Lake	LRKNDAAQQVYISYCKNIFQHQNACIERIESNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPENKFPAA
JGI25909J50240_10046214	3300003393	Freshwater Lake	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
JGI25907J50239_11188692	3300003394	Freshwater Lake	SEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
JGI25912J50252_100131383	3300003412	Freshwater Lake	LRKNDAAQQVYISYCKNKFQHHNACIERIESNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQP
JGI25922J50271_100019372	3300003413	Freshwater Lake	MYCISHSEILFLILRKNDAAQQVNISYCENKFQYQNACIERIESNKWPRLSNMNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK*
JGI25914J50564_100071202	3300003429	Freshwater Lake	MTYISHCGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK*
JGI25928J51866_10088623	3300003616	Freshwater Lake	MTYISHRGILFLILRKIDAMQQVFISYCENKFQDQNACLAKIQTIKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0007752_101545701	3300004789	Freshwater Lake	MTHISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0007761_101268401	3300004792	Freshwater Lake	MTYISHRGILFLILRKINAMQQALFRIVKINFNIKTHAWQKFKPTSTRQSNANALREENLQQQGEKIFTTPRKQRVSPVACAQPDK*
Ga0007757_100621841	3300004810	Freshwater Lake	MTYISHCGILFLILRKINAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0070374_102495831	3300005517	Freshwater Lake	LRKNDAAQQVYISYCKNKFQHHNACIERIESNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPENKFPAANQL
Ga0070374_103904012	3300005517	Freshwater Lake	MNHISHSEILFLILRKNDAMQQVNISYCENKFQYQTACLKGIQNNKWSCLSNANALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0049080_102634721	3300005582	Freshwater Lentic	MIDISHSEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0049085_100191482	3300005583	Freshwater Lentic	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTTPRKQRVSPVACAQPDK*
Ga0075464_100987992	3300006805	Aqueous	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTYPWKQRVSPVACAQPDK*
Ga0075464_105083932	3300006805	Aqueous	LRKNDAAQQVYISYCKNKFQHHNACIERIESNKWPRLSNMNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102873_12199641	3300007545	Estuarine	MTYISYYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRV
Ga0102873_12220941	3300007545	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRV
Ga0102874_10546552	3300007546	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRK
Ga0102875_10738502	3300007547	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACALQDK*
Ga0102875_11347711	3300007547	Estuarine	MTYISHCEILFLILRKNDAMQQVFISYYENKFQYQNACLTRIQNIKHTCQSNTNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102877_11162632	3300007548	Estuarine	KNQYLMTYISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102877_11821891	3300007548	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREENLQQHGEKIFTSPRKQRVSPVACAQPDK*
Ga0102877_12094451	3300007548	Estuarine	MNYISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCASLSNPNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102879_10876292	3300007549	Estuarine	MTYISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPR
Ga0102879_10942371	3300007549	Estuarine	LMTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102879_11385891	3300007549	Estuarine	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVAC
Ga0102880_10063422	3300007550	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102819_10412722	3300007553	Estuarine	MTYISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102821_10188471	3300007557	Estuarine	HISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102822_11309582	3300007558	Estuarine	MTYLSHYEILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102914_11138912	3300007561	Estuarine	MTYISHYEILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102916_11818472	3300007585	Estuarine	MYCISHSEILFLILRKNDAAQQVYISYCENKFQYQNACIERIESNKWPRLSNMNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102918_12322171	3300007593	Estuarine	MTYISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQ
Ga0102919_12361201	3300007597	Estuarine	MTYISHCGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRV
Ga0102920_11743912	3300007600	Estuarine	MNNISHGEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0102923_10399952	3300007606	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQANANALREGNLQQQGEKIFTSPRKQRVSPVACAQPD
Ga0102897_11364192	3300007617	Estuarine	MNYISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKRRVSPVACAQPDK*
Ga0102896_10630572	3300007618	Estuarine	MNYISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0102896_11217981	3300007618	Estuarine	MTYISYYEILFLILRKIDAMQQAFISYCENKFQQQNACLAKIQTNKHPRQANANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102878_10272511	3300007624	Estuarine	MTYISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102870_11759911	3300007625	Estuarine	MYCISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0102869_10216982	3300007627	Estuarine	MTYISHRGILFLILRKIDAMQQVFISHCDNKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102895_11708922	3300007629	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACVQSDK*
Ga0102903_11011002	3300007630	Estuarine	MNNISHGEILFLILRKNDATQQVYISYYESKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0102894_11675072	3300007632	Estuarine	MTYISHYEILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSP
Ga0102902_10048364	3300007644	Estuarine	MTYISHYEILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102912_10068651	3300007649	Estuarine	ILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102912_12368192	3300007649	Estuarine	MNNISHSEILFLILRKNDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFT
Ga0102868_10507052	3300007653	Estuarine	MTYISHYEILFLILRKIDAMQQAFISYCENKFQQQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102862_10193191	3300007670	Estuarine	MTYISHYEILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102899_11866031	3300007706	Estuarine	MTYISHCEILFLILRKIGAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRV
Ga0102859_12205522	3300007708	Estuarine	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0102867_12179571	3300007716	Estuarine	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACA*
Ga0105735_10021722	3300007860	Estuary Water	MTYISYYEILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0105745_10377463	3300007972	Estuary Water	MYCISHSEILFLILRKNDAAQQVYISYCKNKCQHHNACIERIESNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0105747_11102471	3300007974	Estuary Water	MHFISHSEILFLISRKNDAAQQVYISYCENKFQHQTACIKRIQSNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0105748_102831762	3300007992	Estuary Water	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQANKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102893_10377622	3300008052	Estuarine	MTYISHRGILFLILRKIDAMQQDFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102888_10601612	3300008995	Estuarine	MTYISYYEILFLILRKIDAMQQAFISYCENKFQQQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPWKQRVSPVACTQPDK*
Ga0102831_11373552	3300008996	Estuarine	MTYISHCGILFLILRKIDAMQQVYISYCENKFQYQNACIERIESNKWPRLSNMNALREGYLQQQGEKIFTSPRKQRVSPV
Ga0102811_10688423	3300009024	Estuarine	MTYLSHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102864_10189102	3300009051	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENRFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102860_10402411	3300009056	Estuarine	MHFISHSEILFLILRKNDAAQQVNISYCENKFQYQNACIERIESNKWPRLSNMNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102854_12334091	3300009058	Estuarine	YQQLMNHIPHSEILFLILRKNNAMQQGYISYCESKFQYQTACLTGIQNNKWPRLSNANAFREGYLQQQGEKIFTSPRKQRVSPVACSQPDK*
Ga0102830_11329012	3300009059	Estuarine	MNHISHSEILFLILRKNDAMQQVFISYCENKFQYQNACLTRIQNIKHTCQSNTNALREGYLQQQGEKIFTSPRK
Ga0114973_105245451	3300009068	Freshwater Lake	MTYISHRGILFLILRKINAMQQVFISYCENKFQHQNACLAKIQTNKHPRQANANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0114962_100776762	3300009151	Freshwater Lake	MNNISHSEILFLILRKNDATQQDNISYYKNKFQKESVHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0114980_107406201	3300009152	Freshwater Lake	MNHISHSEILFLILRKNDATQQAYISYYKNKFQLQTTRFTRIQSNKWPRLSNANALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0114968_104705812	3300009155	Freshwater Lake	MNNISHSEILFLILRKNDATQQDDISYYENKFQKESVHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0114977_101202472	3300009158	Freshwater Lake	MNNISHSEILFLILRKNDATQQDYISYYENKFQKQSAHAIRIQNNKCASLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0114978_101270022	3300009159	Freshwater Lake	MNNISHSEILFLILRKNDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0114975_101693851	3300009164	Freshwater Lake	MNHISHSEILFLILRKNDATQQAYISYYKNKFQLQTTRFTRIQSNKWPRLSNANALREGYLQQQGEKIFTSPWKQRVSPVACAQ
Ga0114979_107417131	3300009180	Freshwater Lake	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCASLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0114971_100282082	3300009185	Freshwater Lake	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQANANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0114971_108000902	3300009185	Freshwater Lake	MNHISHSEILFLILRKNDAMQQAYISYCENKFQYQTACLTGIQNNKWSCLSNANALREGYLQQQGEKIFTSPWKQRVSPVACAQP
Ga0114958_102678451	3300009684	Freshwater Lake	MNNISHSEILFLILRKNDATQQDNISYYKNKFQKESVHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPWKQRVSPVAFAQPDK*
Ga0102890_10089983	3300010309	Estuarine	MTYISHRGILFLILRKINAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0102883_11136871	3300010312	Estuarine	MTYISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRV
Ga0129318_100019713	3300011009	Freshwater To Marine Saline Gradient	MNYISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0153800_10270601	3300011995	Freshwater	SHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK*
Ga0157139_10008903	3300012345	Freshwater	MNNISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK*
Ga0157210_10113541	3300012665	Freshwater	MYCISHSEILFLILRKNDAAQQVYISYCKNKFQHHNACIERIESNKWPRLSNVNALREGFLQQQGEKIFTSP
Ga0164293_109240661	3300013004	Freshwater	LRKIDAVQQLNISQCKTKFRSLLVPLTGIQNINSARLSNSNALREGYLQQQGEKIFTSPWKRRVSPVACAQPDK*
Ga0187845_12103041	3300018815	Freshwater	MTYISHCGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKQPRQANANALIEGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0211736_109367132	3300020151	Freshwater	MHFISHSEILFLISRKNDAAQQVYISYCENKFQHQTACIKRIQSNKWPRLSNVNALREGYLQQQGEKIFT
Ga0211734_106355441	3300020159	Freshwater	MVLISHSEILFLILRKNDAMQQVFISYYENKFQYQNACLTRIQNIKHTCQSNTNALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0211729_106712723	3300020172	Freshwater	LRKIDAVQQLNISQCKTKFRSLLVPLTGIQNINSARLSNSNALREGYLQQQGEKIFTSPWKERVSPVACAQPDK
Ga0208720_10040942	3300020495	Freshwater	MLISHSEIIFLILRKNDAMQQTFISYYENKFQDQNPCATRIRNIKHTPLSNTNSLREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0207936_10032253	3300020512	Freshwater	MIISHSEIIFLILRKNDAMQQTFISYYENKFQDQNPCATRIRNIKHTPLSNTNSLREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208722_10306401	3300020537	Freshwater	VISHSEIIFLILRKNDAMQQTFISYYENKFQDQNPCATRIRNIKHTPLSNTNSLREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208082_10380511	3300020563	Freshwater	MVISHNEIIFLILRKNDAMQQTFISYYENKFQDQNPCATRIRNIKHTPLSNTNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208718_10840271	3300020565	Freshwater	MTYISHCEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQANANALREGNLQQQGEKIFTSPRKQRVSP
Ga0214162_10434132	3300021108	Freshwater	YISHCGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQANANALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0210307_13391311	3300021336	Estuarine	MTYISHRGILFLILRKINAMQQVFISYCEKKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0194045_10731152	3300021516	Anoxic Zone Freshwater	MNNISHSEILFLILRKNDATQQDNISYYENKFHKQSAHAIRIQNNKCASLSNPNALREGYLQQQGEKIFTSPWKQRVSPVA
Ga0194048_100705262	3300021519	Anoxic Zone Freshwater	MNNISHSEILFLILRKNDATQQDNISYYKNKFQKESVHAFRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0194059_12286891	3300021600	Anoxic Zone Freshwater	MNNISHSEILFLILRKNDATQQDNISYYKNKFQKESVHAFRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQ
Ga0222714_105906242	3300021961	Estuarine Water	MTYISHRGILFLILRKIDAMQQVFISYCENKFQYQTACSTRIQNIKHTCQSNTNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0222712_106244682	3300021963	Estuarine Water	MNNISHSEILFLILRKNDATQQAYISYCKNKFQLQTTSFTRIQSNKWPRLSNANALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0214919_106710812	3300023184	Freshwater	MNNISHSEILFLILRKNDATQQVNISYYKNKFQRQSTRTTRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQLVSPVACAQPDK
Ga0244777_103361562	3300024343	Estuarine	LRKIDAVQQLNISQCKTKFRSLLVPLTGIQNINSARLSNSNALREGYLQQQGEKIFTSPWKRRVSPVAC
Ga0244775_101078602	3300024346	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0244776_100174186	3300024348	Estuarine	YLFIKNQYLMTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0244776_104390511	3300024348	Estuarine	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0256317_10050383	3300024862	Freshwater	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALKEENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208426_10517252	3300025451	Aqueous	LMNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0208916_100324543	3300025896	Aqueous	MNYISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0208443_10962272	3300027084	Estuarine	MNYISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNSNALREGYLQQQGEKIFT
Ga0255116_10230231	3300027124	Freshwater	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255071_10293761	3300027127	Freshwater	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRLSNMNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255099_10309753	3300027128	Freshwater	MYCISHSEILFLILRKNDAAQQVYISYCENKFQHQTACIKRIQSNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255082_10176933	3300027139	Freshwater	MYCISHSEILFLILRKNDAAQQVYISYCENKFQYQNACIERIESNKWPRLSNMNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255105_100024414	3300027143	Freshwater	FISHSGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255114_10059183	3300027145	Freshwater	MVISHSEIIFLILRKNDAMQQTFISYYENKFQDQNPCATRIRNIKHTPLSNTNSLREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255113_10005391	3300027147	Freshwater	EILFLILRKNDAAQQVYISYCKNKFQHHNACIERIESNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255100_10768831	3300027152	Freshwater	LMYCISHSEILFLILRKNDAAQQVYISYCKNKFQHHNACIERIESNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255083_10740282	3300027153	Freshwater	LMTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208926_10196833	3300027205	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQAREKIFTSPRKQRVSPVACAQPDK
Ga0208554_10113543	3300027212	Estuarine	NHISHSEILFLILRKNDAAQQAYISYCENKFQYQTACLTKIQNNKWPRLSNANAFREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208557_10427962	3300027221	Estuarine	SHRGILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208929_10433241	3300027227	Estuarine	MTYISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208803_10890701	3300027232	Estuarine	MTYISHYEILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208804_10056902	3300027235	Estuarine	MTYISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208173_10082033	3300027244	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVS
Ga0208931_10063783	3300027246	Estuarine	MTYISHYEILFLILRKIDAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208923_10279823	3300027320	Estuarine	INAMQQVFISYCENKFQHQNPCLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255095_10558112	3300027489	Freshwater	ILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255077_10179742	3300027529	Freshwater	MHFISHSEILFLISRKNDAAQQVYISYCENKFQHQTACIKRIQSNKWPRLSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208682_10036591	3300027531	Estuarine	MTYISHYEILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQR
Ga0255120_10096851	3300027594	Freshwater	LITYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255122_10556671	3300027595	Freshwater	LMTYISHCGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNVNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0255119_10228351	3300027596	Freshwater	QYLMTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0208974_10057691	3300027608	Freshwater Lentic	MTYISHCGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRV
Ga0209617_100558931	3300027720	Freshwater And Sediment	HISHYEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0209297_10796882	3300027733	Freshwater Lake	MNHISHSEILFLILRKNDATQQAYISYYKNKFQLQTTRFTRIQSNKWPRLSNANALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0208671_100099522	3300027757	Estuarine	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0209088_103756281	3300027763	Freshwater Lake	MTYISHRGILFLILRKINAMQQVFISYCENKFQHQNACLAKIQTNKHPRQANANALREGNLQQQGEKIFTSPRKQRVSPVACA
Ga0209134_100046712	3300027764	Freshwater Lake	MNYISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCASLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0209829_101045132	3300027777	Freshwater Lake	MNNISHSEILFLILRKNDATQQDNISYYKNKFQKESVHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPWKQRVSPVAFAQPDK
Ga0209500_100132052	3300027782	Freshwater Lake	MKFISYREIKFLILRKIDAVQQFNISQYETKFRRILGHQMTIQNINCARLSNSNALREGYLQQQGEKIFTSPWKRRVSPVACAQPDK
Ga0209107_102884791	3300027797	Freshwater And Sediment	ILFLILRKINAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0209354_100150231	3300027808	Freshwater Lake	ISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0209550_104801451	3300027892	Freshwater Lake	MNHISHSEILFLILRKNDAMQQVNISYCENKFQYQTACLKGIQNNKWSCLSNANALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0209550_108232862	3300027892	Freshwater Lake	MILFSHSEILFLISRKNDAMQQVFISYCENKFQYQTACSTRIQNIKHTCQSNTNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0304728_10881141	3300028393	Freshwater Lake	MNNISHSEILFLILRKNDATQQDNISYYKNKFQKESVHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0315899_103533492	3300031784	Freshwater	MTYISHRGILFLILRKINAMQQVFISYCENKFQHQNACLAKIQTNKHPRQSNANALREENLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0334981_0050359_526_786	3300033980	Freshwater	MIISHSEIIFLILRKNDAMQQTFISYYENKFQDQNPCATRIRNTKHTPLSNTNSLREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0334989_0595747_42_305	3300033984	Freshwater	MTYISHCEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQANANALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0334989_0626467_74_337	3300033984	Freshwater	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0335002_0069984_1066_1326	3300034020	Freshwater	MIISHSEIIFLILRKNDAMQQTFISYYENKFQDQNPCATRIRNIKHTPLSNTNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0335005_0253760_619_882	3300034022	Freshwater	MTYISHCEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQANANALREGNLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0335023_0108742_582_806	3300034050	Freshwater	LRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPWKQRVSPVACAQPDK
Ga0334983_0185507_3_245	3300034060	Freshwater	MTYISHCEILFLILRKIDAMQQAFISYCENKFQHQNACLAKIQTNKHPRQANANALREGYLQQQGEKIFTSPRKQRVSPVA
Ga0335031_0397136_312_575	3300034104	Freshwater	MIAISHSEILFLILRKNDAMQQVFISYYENKFQYQNACLTRIQNIKHTCQSNTNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0335031_0767723_3_233	3300034104	Freshwater	MTYISHRGILFLILRKIDAMQQVFISYCENKFQHQNACLAKIQTNKQPRQANANALREGNLQQQGEKIFTSPRKQRV
Ga0335037_0363626_562_783	3300034107	Freshwater	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNPNALREGYLQQQGEKIFTSPWK
Ga0335055_0049201_834_1094	3300034110	Freshwater	MLISHSEIMFLILRKNDAMQQTFISYYENKFQDQNPCATRIRNIKHTPLSNTNALREGYLQQQGEKIFTSPRKQRVSPVACAQPDK
Ga0335017_0296203_2_220	3300034167	Freshwater	MNHISHSEILFLILRKIDATQQDYISYYENKFQKQSAHAIRIQNNKCARLSNSNALREGYLQQQGEKIFTSPW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039038

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences