Metagenome Family F039016

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F039016
Family Type	Metagenome
Number of Sequences	164
Average Sequence Length	44 residues
Representative Sequence	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRGAA
Number of Associated Samples	84
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	71.34 %
% of genes from short scaffolds (< 2000 bps)	64.63 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (70.732 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.854 % of family members)
Environment Ontology (ENVO)	Unclassified (76.220 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.537 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.43% β-sheet: 0.00% Coil/Unstructured: 48.57%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF02518	HATPase_c	1.83
PF00119	ATP-synt_A	1.83
PF04392	ABC_sub_bind	1.83
PF00873	ACR_tran	1.22
PF03734	YkuD	1.22
PF06348	DUF1059	1.22
PF13185	GAF_2	0.61
PF03466	LysR_substrate	0.61
PF06863	DUF1254	0.61
PF03330	DPBB_1	0.61
PF04909	Amidohydro_2	0.61
PF01381	HTH_3	0.61
PF00239	Resolvase	0.61
PF00664	ABC_membrane	0.61
PF09361	Phasin_2	0.61
PF11339	DUF3141	0.61
PF02586	SRAP	0.61
PF13396	PLDc_N	0.61
PF02040	ArsB	0.61
PF13545	HTH_Crp_2	0.61
PF13410	GST_C_2	0.61
PF05239	PRC	0.61
PF01520	Amidase_3	0.61
PF02627	CMD	0.61
PF00072	Response_reg	0.61
PF13645	YkuD_2	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	1.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.83
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.22
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.22
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.61
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.61
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.61
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.61
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.61
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.61
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.61
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.61
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
All Organisms	root	All Organisms	29.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
cellular organisms	root	All Organisms → cellular organisms	29.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.20 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.27 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.61 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.61 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.27 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.88 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.61 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.61 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.61 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.44 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.61 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.61 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.61 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.61 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.27 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.61 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.61 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.61 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.61 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.61 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.27 %
Methylobacterium sp. 17Sr1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 17Sr1-1	0.61 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.61 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.61 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.61 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.61 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.61 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_100367541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2340	Open in IMG/M
3300005764\|Ga0066903_108309351	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_108861265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300006162\|Ga0075030_101515267	Not Available	525	Open in IMG/M
3300006893\|Ga0073928_11110724	Not Available	535	Open in IMG/M
3300010048\|Ga0126373_10881450	Not Available	959	Open in IMG/M
3300010376\|Ga0126381_102338081	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300010376\|Ga0126381_103132924	Not Available	655	Open in IMG/M
3300010376\|Ga0126381_104891457	Not Available	514	Open in IMG/M
3300012961\|Ga0164302_10584974	Not Available	806	Open in IMG/M
3300012971\|Ga0126369_11407036	Not Available	787	Open in IMG/M
3300016270\|Ga0182036_11387393	Not Available	588	Open in IMG/M
3300016294\|Ga0182041_10385370	Not Available	1188	Open in IMG/M
3300016294\|Ga0182041_10435425	Not Available	1123	Open in IMG/M
3300016294\|Ga0182041_11185559	Not Available	696	Open in IMG/M
3300016294\|Ga0182041_11376910	Not Available	647	Open in IMG/M
3300016294\|Ga0182041_11557028	Not Available	609	Open in IMG/M
3300016294\|Ga0182041_11678369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300016294\|Ga0182041_12067611	Not Available	531	Open in IMG/M
3300016319\|Ga0182033_10488340	Not Available	1056	Open in IMG/M
3300016319\|Ga0182033_10949236	Not Available	763	Open in IMG/M
3300016319\|Ga0182033_11304228	Not Available	652	Open in IMG/M
3300016319\|Ga0182033_11984473	Not Available	530	Open in IMG/M
3300016341\|Ga0182035_11048871	Not Available	724	Open in IMG/M
3300016341\|Ga0182035_11980217	Not Available	529	Open in IMG/M
3300016357\|Ga0182032_10119394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1899	Open in IMG/M
3300016371\|Ga0182034_10756546	Not Available	829	Open in IMG/M
3300016371\|Ga0182034_11120087	Not Available	683	Open in IMG/M
3300016371\|Ga0182034_11533168	Not Available	584	Open in IMG/M
3300016387\|Ga0182040_10417028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1057	Open in IMG/M
3300016404\|Ga0182037_10145317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1779	Open in IMG/M
3300016404\|Ga0182037_11355622	Not Available	628	Open in IMG/M
3300016422\|Ga0182039_11332642	Not Available	651	Open in IMG/M
3300016422\|Ga0182039_12276460	Not Available	500	Open in IMG/M
3300016445\|Ga0182038_10424927	Not Available	1119	Open in IMG/M
3300016445\|Ga0182038_10470200	Not Available	1067	Open in IMG/M
3300016445\|Ga0182038_10785474	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300016445\|Ga0182038_11740006	Not Available	562	Open in IMG/M
3300017822\|Ga0187802_10448659	Not Available	512	Open in IMG/M
3300017924\|Ga0187820_1034503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1324	Open in IMG/M
3300017930\|Ga0187825_10104543	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300017936\|Ga0187821_10142654	Not Available	902	Open in IMG/M
3300017942\|Ga0187808_10145998	Not Available	1041	Open in IMG/M
3300017943\|Ga0187819_10746489	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300017959\|Ga0187779_10174117	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300017959\|Ga0187779_10766673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300017970\|Ga0187783_10147454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1734	Open in IMG/M
3300017974\|Ga0187777_10345153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1023	Open in IMG/M
3300017995\|Ga0187816_10062519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1569	Open in IMG/M
3300020579\|Ga0210407_10923616	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300020582\|Ga0210395_10872810	Not Available	669	Open in IMG/M
3300021405\|Ga0210387_10850093	Not Available	805	Open in IMG/M
3300025928\|Ga0207700_10803390	Not Available	841	Open in IMG/M
3300026810\|Ga0207801_109197	Not Available	619	Open in IMG/M
3300026865\|Ga0207746_1011113	Not Available	786	Open in IMG/M
3300031543\|Ga0318516_10030062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2857	Open in IMG/M
3300031564\|Ga0318573_10004137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5614	Open in IMG/M
3300031679\|Ga0318561_10720136	Not Available	549	Open in IMG/M
3300031682\|Ga0318560_10368491	Not Available	776	Open in IMG/M
3300031708\|Ga0310686_101553693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2259	Open in IMG/M
3300031708\|Ga0310686_102027910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1744	Open in IMG/M
3300031713\|Ga0318496_10067767	Not Available	1876	Open in IMG/M
3300031719\|Ga0306917_10358619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300031723\|Ga0318493_10783480	Not Available	537	Open in IMG/M
3300031724\|Ga0318500_10109864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1263	Open in IMG/M
3300031744\|Ga0306918_10482546	Not Available	970	Open in IMG/M
3300031744\|Ga0306918_10482947	Not Available	969	Open in IMG/M
3300031744\|Ga0306918_10612952	Not Available	853	Open in IMG/M
3300031748\|Ga0318492_10020209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2884	Open in IMG/M
3300031748\|Ga0318492_10427157	Not Available	698	Open in IMG/M
3300031768\|Ga0318509_10468563	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031768\|Ga0318509_10699804	Not Available	562	Open in IMG/M
3300031771\|Ga0318546_10102300	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300031771\|Ga0318546_10847264	Not Available	643	Open in IMG/M
3300031798\|Ga0318523_10134526	Not Available	1225	Open in IMG/M
3300031819\|Ga0318568_10427579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	825	Open in IMG/M
3300031879\|Ga0306919_10151412	Not Available	1691	Open in IMG/M
3300031879\|Ga0306919_11120498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	599	Open in IMG/M
3300031880\|Ga0318544_10199430	Not Available	772	Open in IMG/M
3300031890\|Ga0306925_10149438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	2513	Open in IMG/M
3300031890\|Ga0306925_10477778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1329	Open in IMG/M
3300031896\|Ga0318551_10151130	Not Available	1267	Open in IMG/M
3300031897\|Ga0318520_10585489	Not Available	693	Open in IMG/M
3300031910\|Ga0306923_10120802	All Organisms → cellular organisms → Bacteria → Proteobacteria	2972	Open in IMG/M
3300031910\|Ga0306923_10844807	Not Available	1007	Open in IMG/M
3300031910\|Ga0306923_11451546	Not Available	720	Open in IMG/M
3300031912\|Ga0306921_10848908	Not Available	1040	Open in IMG/M
3300031912\|Ga0306921_10906776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1000	Open in IMG/M
3300031912\|Ga0306921_12078780	Not Available	602	Open in IMG/M
3300031941\|Ga0310912_10061129	All Organisms → cellular organisms → Bacteria	2681	Open in IMG/M
3300031942\|Ga0310916_10015649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5214	Open in IMG/M
3300031942\|Ga0310916_11109450	Not Available	657	Open in IMG/M
3300031942\|Ga0310916_11628517	Not Available	523	Open in IMG/M
3300031945\|Ga0310913_11188345	Not Available	531	Open in IMG/M
3300031946\|Ga0310910_10112336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2039	Open in IMG/M
3300031946\|Ga0310910_10287060	Not Available	1292	Open in IMG/M
3300031947\|Ga0310909_10173604	Not Available	1782	Open in IMG/M
3300031954\|Ga0306926_10306208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 17Sr1-1	1966	Open in IMG/M
3300031954\|Ga0306926_10620756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1318	Open in IMG/M
3300031954\|Ga0306926_10854461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1093	Open in IMG/M
3300031981\|Ga0318531_10282103	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300032001\|Ga0306922_12106148	Not Available	546	Open in IMG/M
3300032001\|Ga0306922_12118293	Not Available	544	Open in IMG/M
3300032035\|Ga0310911_10019683	All Organisms → cellular organisms → Bacteria	3230	Open in IMG/M
3300032035\|Ga0310911_10078503	All Organisms → cellular organisms → Bacteria	1776	Open in IMG/M
3300032059\|Ga0318533_10485398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	905	Open in IMG/M
3300032060\|Ga0318505_10154851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1063	Open in IMG/M
3300032063\|Ga0318504_10212423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300032076\|Ga0306924_11146591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	844	Open in IMG/M
3300032091\|Ga0318577_10012143	All Organisms → cellular organisms → Bacteria	3419	Open in IMG/M
3300032261\|Ga0306920_100427564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1969	Open in IMG/M
3300032261\|Ga0306920_100854377	Not Available	1333	Open in IMG/M
3300032261\|Ga0306920_102652086	Not Available	686	Open in IMG/M
3300032261\|Ga0306920_104045100	Not Available	531	Open in IMG/M
3300033289\|Ga0310914_10347847	Not Available	1340	Open in IMG/M
3300033289\|Ga0310914_10407802	Not Available	1230	Open in IMG/M
3300033289\|Ga0310914_10474913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1132	Open in IMG/M
3300033290\|Ga0318519_10567049	Not Available	688	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.51%
Aquatic	Environmental → Aquatic	5.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.51%
Freshwater	Environmental → Aquatic → Freshwater	4.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.61%
Sediment	Environmental → Aquatic → Sediment	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.76%
Loam	Environmental → Terrestrial → Soil → Loam	6.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.05%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	78.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.05%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.61%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026810	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 16 (SPAdes)	Environmental	Open in IMG/M
3300026865	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1042788551	3300005332	Tropical Forest Soil	MKLLRTTALTAALIAIAVPSLTSSAQAWRLRGHGWRAAAVGAAVVGGA
Ga0066903_1003675416	3300005764	Tropical Forest Soil	MKLLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRA
Ga0066903_1048415412	3300005764	Tropical Forest Soil	MKLLRTAALTTALIAVAVPSLTSSAHAWRGWRAGGWGWRGAALGAAAVGT
Ga0066903_1083093511	3300005764	Tropical Forest Soil	MKLLRTTALTAVLLTAAVPSLTSPAHAWRGGGWGWGG
Ga0066903_1088612652	3300005764	Tropical Forest Soil	MKLLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAAAV
Ga0075030_1015152672	3300006162	Watersheds	MQVPRLRTAALTAALMTAAVPALPTSANAWGWGHGGW
Ga0073928_111107241	3300006893	Iron-Sulfur Acid Spring	MQVPRLRTAALTAALMTAAVPALPSSAHAWGHGGWGWGG
Ga0126373_108814503	3300010048	Tropical Forest Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWGWGGVGLGLAA
Ga0126373_122536942	3300010048	Tropical Forest Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRWRGVGWRGAALGAAAVGTALAARSYYGGYGY
Ga0126379_115372792	3300010366	Tropical Forest Soil	MKLLRTTALTAVLMTAAIPLLTSDAQAWRGWRGAGWGWRGAALGAAAVGTALAARSY
Ga0126381_1023380811	3300010376	Tropical Forest Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWGW
Ga0126381_1024020702	3300010376	Tropical Forest Soil	MKLLRTTAFTAALMTAAVTSLTSPAQAQAALAWGWRGGGWGWPGASVGALATEA
Ga0126381_1031329242	3300010376	Tropical Forest Soil	MKLLRTTALTAVLMTAAIPLLTSDAQAWRWRGAGWRAAAVGAA
Ga0126381_1048914571	3300010376	Tropical Forest Soil	MKLLRTTALTAALITAAVPLLTSSAEAWRGGGWRGGGWRGAAVGWR
Ga0164302_105849741	3300012961	Soil	MNLRTTALATALVAASAPSLPASANAAHWGRGWGWGGVGLGLLA
Ga0126369_114070362	3300012971	Tropical Forest Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWGWGGV
Ga0182036_107807881	3300016270	Soil	MKLLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAAAVGAAVVGG
Ga0182036_113873932	3300016270	Soil	MRLFRTAALTAALMAAAVPLLTSQAQAWRWRGAGLGW
Ga0182041_103853701	3300016294	Soil	MRLLRTTALTAALMTAAVPSLTSPAHAWGWRGGGWG
Ga0182041_104354253	3300016294	Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWG
Ga0182041_111855593	3300016294	Soil	MKLLRTTALTAVLITAAVPILTSSAEAWRGGGWRGGGWR
Ga0182041_113769101	3300016294	Soil	MKLLRTTALTAALITAAVPLLTSSAEAWRGGGWRGGGWRG
Ga0182041_115570281	3300016294	Soil	MRLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGW
Ga0182041_116783691	3300016294	Soil	MKLLRTTSFTAALMTAAVMSLTSPALAQDWGWGWRGGGW
Ga0182041_120676112	3300016294	Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWR
Ga0182033_104883403	3300016319	Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWGWRGAALGAAA
Ga0182033_109492361	3300016319	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRGA
Ga0182033_113042281	3300016319	Soil	LEIIMKLLHTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAAAV
Ga0182033_119844731	3300016319	Soil	MKLLPPTAFTAALMTATVMSLTSPALAQDWGWGWRGGGWG
Ga0182035_100509037	3300016341	Soil	MKLLHTTALTAALMTAAVMSVTSPAQAQAALAWGWRGGGWGWPGASVGALATE
Ga0182035_110488712	3300016341	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGRGWGWGGVGL
Ga0182035_119802171	3300016341	Soil	MTVRREVFMRLLRTTALTAALMAVALPLLTSPADAWRGGGFRGARVG
Ga0182032_101193945	3300016357	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWRAAAVGA
Ga0182034_107565464	3300016371	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWR
Ga0182034_111200872	3300016371	Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGW
Ga0182034_115331683	3300016371	Soil	MKLLRTTALTAVLITAAVPILTSSAEAWRGGGWRGGGWRG
Ga0182040_102875894	3300016387	Soil	MKLLRTTALTAALIAIAVPSLTSSAQAWRGWRGGGWRGAAVGAAVVGGALAARSY
Ga0182040_104170282	3300016387	Soil	MKLLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAAAVGAAV
Ga0182037_101453171	3300016404	Soil	MKLLHTTALTAALMTAAVMSVTSPAQAQAALAWGWRGGGWGW
Ga0182037_113556222	3300016404	Soil	MKLLRTTALTAALITAAVPILTSSAEAWRGGGWRG
Ga0182039_110191053	3300016422	Soil	MKLLRTTALTAALITAAVPLLTSDAKAWRGWRGGGWGWRGAALGAAAVGTALAA
Ga0182039_113326421	3300016422	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGRGWGW
Ga0182039_122764602	3300016422	Soil	VFVGKLLRTTALAAALITVAVPLLTSSAEAWRGGGWRGGGWRGAAV
Ga0182038_104249271	3300016445	Soil	MKLLHTTALTAALMTAAVMSVTSPAQAQAALAWGWRGGGWGWPGASVGA
Ga0182038_104702001	3300016445	Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWGWRGAAL
Ga0182038_107854742	3300016445	Soil	MKLLPTTAFTVALMSAAVMSLTSPALAQDWGWGWR
Ga0182038_117400061	3300016445	Soil	MRLIRTTALTAALIAVAVPSLTSSALAWRGGGWRGAAVGWRG
Ga0187802_104486591	3300017822	Freshwater Sediment	MKLLRTTALSAALMTAAVPSLTSPAQAFGWGWRGGGWGWGGA
Ga0187820_10345033	3300017924	Freshwater Sediment	MKLLRTTALTAALMTAAVPSLTSPAHAWGWGWRGAG
Ga0187825_101045431	3300017930	Freshwater Sediment	MKPLRTITLTAALMTAAVASLTSPGDAWDLDWGGWGWGGVTVGL
Ga0187821_101426541	3300017936	Freshwater Sediment	MKLLRTTALTAALMTAAVPSLTSPAHAWGWGWRGAGLGLAAAAVVGTAL
Ga0187808_101459982	3300017942	Freshwater Sediment	MKLLRTTALTAALMTAAVPSLTSPAHAWGWGWRGAGLGLA
Ga0187819_107464891	3300017943	Freshwater Sediment	LEGFMKPLRTITLTAALMTAAVASLTSPGHAWDLDWGGWGWGGVTV
Ga0187779_101741171	3300017959	Tropical Peatland	MKLLRTTALTAALMTAAVPSLTSPAHAWGWGRAGWGWGG
Ga0187779_107666732	3300017959	Tropical Peatland	MKLLRTSALTAALMTAAVPSLTTPAHAWGWGWRGAGWGWGGAALGLA
Ga0187779_108865231	3300017959	Tropical Peatland	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGWRGAALGAAVVGSAIAA
Ga0187783_101474542	3300017970	Tropical Peatland	MKLLRTTALTAALMAVAVPSLTTPANAWGWGRGWGWGGVGLGLATAAVVG
Ga0187777_103451531	3300017974	Tropical Peatland	MKLLRTTALSAALMTAAVPSLTTPANAWGWGWRGGAGWGGVGLGL
Ga0187816_100625191	3300017995	Freshwater Sediment	MKLLHTTALTAALMTAAVPSLTSPANAWGLGWGGGWGWGG
Ga0210407_109236161	3300020579	Soil	MKLLRTTALSAALMTAAVPMLTSPAHAWGLGWGWR
Ga0210395_108728101	3300020582	Soil	MKLLRTTALTAALMTAAVPMLTSPAHAWGWGGSALTAILRLRL
Ga0210387_108500932	3300021405	Soil	MKLLRTTALTAALMTAAVPMLTSPAHAWGWGGSALTA
Ga0207700_108033902	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWGWGGVG
Ga0207801_1091972	3300026810	Tropical Forest Soil	MKLLRTTALTAALITAAVPLLTSSAEAWRGGGWRGG
Ga0207746_10111131	3300026865	Tropical Forest Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWGWRGAALGA
Ga0207776_10115143	3300027035	Tropical Forest Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWRAAAVGAAVVGGAIAARSYYGGY
Ga0207806_10213982	3300027049	Tropical Forest Soil	MKLLRTTALTAALMTAAVPLLTSQAQAWRGWRGGWRGAALGAAVVGSAIAARNYYGYG
Ga0207826_12040371	3300027680	Tropical Forest Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGGGWGWRGAALGAAAVGTALAA
Ga0318516_100300621	3300031543	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWG
Ga0318541_100593345	3300031545	Soil	MKLLRTTALTAVLMTAAVPLLTSQTQAWRWRGAGLGWRGAAVGAAVVGSAIA
Ga0318573_100041371	3300031564	Soil	MKLLRTTAFTAALMTAAVTSLTSPAQAQAALAWGWR
Ga0318573_100164331	3300031564	Soil	MKVLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWRAAAVGAAVVGGAI
Ga0318561_103938161	3300031679	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRGAALGAAAVGT
Ga0318561_107201361	3300031679	Soil	MKLLRTTAFTAALMTAAVTSLTSPAQAQAALAWGWRGGGWGWPGAS
Ga0318572_108754021	3300031681	Soil	MKLLRTTALTAALITAAVPLLTNSAQAWRGWRGGGWGWRGAALGAAAVGTALAARSY
Ga0318560_101602692	3300031682	Soil	MKLLRTTAFTAALMTAAVTSLTSPAQAQAALAWGWRGGGWGWPGASVGALATEAAVS
Ga0318560_103684912	3300031682	Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGAGWGW
Ga0310686_1015536935	3300031708	Soil	MKLLRTTALSAALMTAAVPSLTSPAHAWGLGWGWGGAAVGLAAG
Ga0310686_1020279102	3300031708	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGWRGAGWGWGGGPQWGLQPER
Ga0318496_100677671	3300031713	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWGWG
Ga0306917_103586191	3300031719	Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWR
Ga0306917_108995782	3300031719	Soil	MKLLHTTALTAALMTAAVMSVTSPAQAQAALAWGWRGGGWGWPGASVGALATEA
Ga0306917_109484961	3300031719	Soil	MKPLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAAAVGAAVIG
Ga0318493_107834802	3300031723	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRGAALGAA
Ga0318493_108466482	3300031723	Soil	MKILRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWRAAAVGAAVVGGAIAARSYYGGYGYGS
Ga0318500_101098641	3300031724	Soil	MKLLRTTALTRVLMTAAVPSLTSSVHAWDWAWRGGGWGGVSVG
Ga0306918_104825463	3300031744	Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWGWR
Ga0306918_104829471	3300031744	Soil	MKLLRTTALTAALITAAVPLLTSSAEAWRGGGWRGGGWRGAAVG
Ga0306918_106129523	3300031744	Soil	MKLLRTTALTAALMTAAVMSLTSPALAQDWGWGWRGGGWG
Ga0306918_108975073	3300031744	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWRAAAVGAAVVGSAI
Ga0318502_106102852	3300031747	Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWGWPGAALGAAAVG
Ga0318492_100202098	3300031748	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWGWGGVGLG
Ga0318492_104271572	3300031748	Soil	MKLLRTTAFTAALMTAAVTSLTSPAQAQAALAWGWRGGGWGWPGASVGAL
Ga0318492_105674141	3300031748	Soil	MKLLRTTALTAALITAAVPILTSSAEAWRGWRGGGWRGAAVGAAVVGGALAARSYY
Ga0318509_104685631	3300031768	Soil	MKLLRTTALTAVLMTAAVPSLTSSAHAWDWAWRGGGWGWGGVSVGEA
Ga0318509_106998041	3300031768	Soil	MKLLHTTALTAALVTAAVPLLTSDAQAWRWRGAGW
Ga0318509_108587921	3300031768	Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWGWRGAALGAAAVGT
Ga0318546_101023003	3300031771	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGWRGGW
Ga0318546_108472642	3300031771	Soil	MKLLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAA
Ga0318523_101345263	3300031798	Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWG
Ga0318523_101377313	3300031798	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWRGAAVGAAVVGGAL
Ga0318568_104275792	3300031819	Soil	MKVLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWRAAAVGAA
Ga0310917_110653932	3300031833	Soil	MKLLRTTAFTAALMTAAVMSLASPALAQDWGWGWRG
Ga0306919_101514123	3300031879	Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWGWPGAAL
Ga0306919_110576171	3300031879	Soil	MKVLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWRAAAVGAAVVGGAIAAR
Ga0306919_111204982	3300031879	Soil	MKLLRTTALTAVLMTAAVPSLTSSAHAWDWAWRGGGWGWGGVSVGE
Ga0318544_101994301	3300031880	Soil	MKLLRTTALTAALITAAVPILTSSAEAWRGGGWRGGGWRG
Ga0306925_101494381	3300031890	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRG
Ga0306925_104777781	3300031890	Soil	MKLLRTTALTAALIAIAVPSLTSSAQAWRGWRGGGWRGA
Ga0306925_106237684	3300031890	Soil	MKLLRTTALTAALIAIAVPSLTSSAQAWRGWRGGGWRGAAVGAAIVGGALAARS
Ga0318551_101511301	3300031896	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWGWGGVGLGLA
Ga0318520_105854891	3300031897	Soil	MKLLHTTALTAALMTAAVMSVTSPAQAQAALAWGWRGGGWGWPG
Ga0306923_101208024	3300031910	Soil	MKLLRTTALTAVLMTAAVPSLTSSAHAWDWAWRGDGWGWGGVSVGEAAGA
Ga0306923_108448071	3300031910	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGHGGWGWGGVGL
Ga0306923_113007342	3300031910	Soil	MKLLHTTALTAALMTAAIPLLTSDAQAWRGWRGGGWGWRGAALGAAAVGTALAA
Ga0306923_114473132	3300031910	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWRAAAVGAAVVGSA
Ga0306923_114515463	3300031910	Soil	MKLLRTTALTAALITAAVPILTSSAEAWRGGGWRGG
Ga0306921_108489081	3300031912	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGRGWGWGGVGLGLAAAA
Ga0306921_109067763	3300031912	Soil	MKPLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAAAVG
Ga0306921_114284791	3300031912	Soil	MKLLRTTAFTAALMTAAVTSLTSPAQAQAALAWGWRGGGWGWPGASVGALATE
Ga0306921_120787802	3300031912	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWRAAAV
Ga0310912_100611291	3300031941	Soil	MKLLRTTALTRVLMTAAVPSLTSSVHAWDWAWRGGGWGWGGVSVGEA
Ga0310916_100156491	3300031942	Soil	MKLLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAAAVGAA
Ga0310916_110029062	3300031942	Soil	MKLLRTTAFTAALITAAVPLLTSQAQAWRGWRGGWRGAALGAAVVGGAIA
Ga0310916_111094502	3300031942	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGRGWGWGGVGLGLAAAAVV
Ga0310916_116285171	3300031942	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWRAA
Ga0310913_100407541	3300031945	Soil	MKLLRTTALTAALIAIAVPSLTSSAQAWRGWRGGGWRGAAVGAAVVGGALA
Ga0310913_111883451	3300031945	Soil	MKLLRTTALTAALITAAVPILTSSAEAWRGGGWRGGGWRGA
Ga0310913_112391001	3300031945	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRGAALGAAAVGTALAARSYYGG
Ga0310910_101123361	3300031946	Soil	MKLLRTTALTAALIAVAVPSLTSSAQAWRWRGAGWG
Ga0310910_102870601	3300031946	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGW
Ga0310909_101736041	3300031947	Soil	MRLLRTTALTAALMTAAVPSLTSPAHAWGWRGGGWGWG
Ga0306926_103062085	3300031954	Soil	MKLLRTTALTAALMTAAVPLLTGEAQAWRWRGAGWR
Ga0306926_106207563	3300031954	Soil	MKLLRTTALTAALITAAVPLLTSDAQAWRGWRGGGWGWRGAALGAA
Ga0306926_108544613	3300031954	Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWRAAA
Ga0306926_115700401	3300031954	Soil	MKLLRTTALTAALITAAIPLLTSDAQAWRGWRGGGWRGAAVGAAVVGGALAARSYYGG
Ga0306926_116838681	3300031954	Soil	MKLLRTTALTAALIAIAVPSLTSSAQAWRGWRGGGWRGAAVGAAVVGGALAARSYYG
Ga0318531_102821031	3300031981	Soil	MKLLRTTAFTAALMTAAVMSLTSPALAQDWGWGWRGGGW
Ga0306922_121061481	3300032001	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWG
Ga0306922_121182931	3300032001	Soil	MKLLRITALTAALIAIAVPSLTSSAQAWRGWRGGGW
Ga0310911_100196835	3300032035	Soil	MKLLRTTALTAALMTAAVPSLTSPAHAWGWRGGGWGWGGVGV
Ga0310911_100785031	3300032035	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRWRGAGWRAAAVGAA
Ga0318549_100066261	3300032041	Soil	MKLLRTTAFTAALMTAAVMSLTSPALAQDWGWGWRGGG
Ga0318533_101111856	3300032059	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRGAAVGAAVVGSALAARSYY
Ga0318533_104853981	3300032059	Soil	MKLLRTTALTAVLMTAAVPSLTSSAHAWDWAWRGG
Ga0318505_101155023	3300032060	Soil	LLEGIMKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWGWPGAALGAAAVGTALAARSYYGYG
Ga0318505_101548512	3300032060	Soil	MKLLRTTALTAVLMTAAVPSLTSSAHAWDWAWRGGGWGWGGVSVGEAAGALI
Ga0318505_106091601	3300032060	Soil	MKLLRTTAFTAALITAAVPLLTSQAQAWRGWRGGWRGAALGAAVVGGAIAARNYYG
Ga0318504_102124232	3300032063	Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWRGAA
Ga0318510_102344882	3300032064	Soil	MKVLRTTALTAALMTAAIPLLTSDAQAWRGWRGGGWRAAAVGAAVVGGAIAARSYYGGYGYG
Ga0318513_104780422	3300032065	Soil	MKLLRTTALTAALMTAAIPLLTSDAQAWRGWRGGWRGAALGAAVVGGAIAARNYYGYGYG
Ga0306924_111465912	3300032076	Soil	MKLLRTTALTAALVTAAVPLLTSDAQAWRWRGAGWRAAAVG
Ga0318577_100121436	3300032091	Soil	MKLLRTTALTAVLMTAAVPSLTSSAHAWDWAWRGGGWGWGGVSVGEAAG
Ga0306920_1004275641	3300032261	Soil	MKLLRTTALTAALITAAVPLLTSDAKAWRGWRGGGWGWRGAALGAAAVGTALAARSYYGG
Ga0306920_1008543774	3300032261	Soil	MKLLRTTALTAALMTAAVPSLTTPANAWGWGRGWG
Ga0306920_1013272281	3300032261	Soil	MKLLPPTAFTAALMTATVMSLTSPALAQDWGWRGGGWGWPGASVGALATRAVVGNAA
Ga0306920_1025367052	3300032261	Soil	MRLLRITALTAVVITAAVPLLTSDAQAWRWRGGGWRAAAVGAAVVGSAIAARSYYGGYGY
Ga0306920_1026520862	3300032261	Soil	MKLLRTTALTATLMTAAVPSLTSSANAWEWGRRGAGWD
Ga0306920_1040451002	3300032261	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRGAA
Ga0310914_103478475	3300033289	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRGWRGGGWGWRGAAVGA
Ga0310914_104078021	3300033289	Soil	MKLLRTTALTAALIAIAVPSLTSSAQAWRLRGHGWRAAAV
Ga0310914_104749131	3300033289	Soil	MKLLRTTALTAALIAIAVPSLTSSAQAWRGWRGGGWRGAAV
Ga0310914_107367222	3300033289	Soil	MKLLRTTALTAALMTAAVPLLTSEAQAWRWRGAGWRAAAVGAAVVGSA
Ga0318519_105670491	3300033290	Soil	MRLLRTTALTAALMTAAVPSLTSPAHAWGWRGGGWGWGGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F039016

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences