Metagenome / Metatranscriptome Family F038880

Basic Information
Family ID	F038880
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	74 residues
Representative Sequence	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Number of Associated Samples	147
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.29 %
% of genes near scaffold ends (potentially truncated)	40.61 %
% of genes from short scaffolds (< 2000 bps)	89.70 %
Associated GOLD sequencing projects	140
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (64.848 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.091 % of family members)
Environment Ontology (ENVO)	Unclassified (34.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.212 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.69% β-sheet: 0.00% Coil/Unstructured: 18.31%
Feature Viewer

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Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF04828	GFA	40.61
PF11769	DUF3313	3.03
PF13533	Biotin_lipoyl_2	1.82
PF03976	PPK2	1.21
PF00211	Guanylate_cyc	1.21
PF03401	TctC	0.61
PF00486	Trans_reg_C	0.61
PF06325	PrmA	0.61
PF13669	Glyoxalase_4	0.61
PF00293	NUDIX	0.61
PF02586	SRAP	0.61
PF16576	HlyD_D23	0.61
PF12698	ABC2_membrane_3	0.61
PF03466	LysR_substrate	0.61
PF00144	Beta-lactamase	0.61
PF01590	GAF	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	40.61
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.21
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	1.21
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.61
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.61
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.61
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.61
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.61
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.61
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.61
COG3897	Protein N-terminal and lysine N-methylase, NNT1/EFM7 family	Posttranslational modification, protein turnover, chaperones [O]	0.61

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.85 %
Unclassified	root	N/A	35.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.85 %
Unclassified	root	N/A	35.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.85 %
Unclassified	root	N/A	35.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.42 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.64 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	2.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.64 %
Frateuria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria	2.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.15 %
Frateuria defendens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria → Frateuria defendens	2.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.21 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01A3VSW	Not Available	510	Open in IMG/M
2166559005\|cont_contig78600	Not Available	688	Open in IMG/M
2170459005\|F1BAP7Q02HK0GM	Not Available	516	Open in IMG/M
2170459005\|F1BAP7Q02I2ZDE	Not Available	512	Open in IMG/M
2170459010\|GIO7OMY01BHY0I	Not Available	500	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0698758	Not Available	1579	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100533152	Not Available	1216	Open in IMG/M
3300000787\|JGI11643J11755_11429385	Not Available	893	Open in IMG/M
3300000789\|JGI1027J11758_12400513	Not Available	626	Open in IMG/M
3300001661\|JGI12053J15887_10009216	All Organisms → cellular organisms → Bacteria	5363	Open in IMG/M
3300002568\|C688J35102_118939960	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300002568\|C688J35102_119665951	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300004081\|Ga0063454_101190039	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300004114\|Ga0062593_102475859	Not Available	587	Open in IMG/M
3300004479\|Ga0062595_101798954	Not Available	582	Open in IMG/M
3300005163\|Ga0066823_10012986	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300005168\|Ga0066809_10184634	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005169\|Ga0066810_10042564	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005328\|Ga0070676_11027559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria → Frateuria defendens	620	Open in IMG/M
3300005329\|Ga0070683_101595035	Not Available	627	Open in IMG/M
3300005335\|Ga0070666_10895842	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005337\|Ga0070682_100625771	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300005337\|Ga0070682_100659826	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300005343\|Ga0070687_100082246	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300005344\|Ga0070661_100502498	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005344\|Ga0070661_101589918	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005364\|Ga0070673_101605271	Not Available	614	Open in IMG/M
3300005436\|Ga0070713_101416890	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005440\|Ga0070705_100718058	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005456\|Ga0070678_101508083	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005458\|Ga0070681_11701704	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005459\|Ga0068867_101103310	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005543\|Ga0070672_101130878	Not Available	696	Open in IMG/M
3300005545\|Ga0070695_101127202	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005547\|Ga0070693_101458629	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005549\|Ga0070704_100156013	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300006028\|Ga0070717_10836695	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300006042\|Ga0075368_10227169	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300006048\|Ga0075363_100796119	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006163\|Ga0070715_10519425	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006178\|Ga0075367_10077446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2007	Open in IMG/M
3300006237\|Ga0097621_100208083	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300006573\|Ga0074055_11849463	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300006604\|Ga0074060_11822632	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300006953\|Ga0074063_14197576	Not Available	606	Open in IMG/M
3300009036\|Ga0105244_10412017	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300009098\|Ga0105245_10030830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4743	Open in IMG/M
3300009156\|Ga0111538_10199513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2538	Open in IMG/M
3300009156\|Ga0111538_13714812	Not Available	529	Open in IMG/M
3300009553\|Ga0105249_12184472	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010042\|Ga0126314_11516319	Not Available	503	Open in IMG/M
3300010373\|Ga0134128_10799576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1045	Open in IMG/M
3300010397\|Ga0134124_12312552	Not Available	578	Open in IMG/M
3300010399\|Ga0134127_12869080	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010401\|Ga0134121_12172555	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300010403\|Ga0134123_12204650	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300010403\|Ga0134123_12304200	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300011000\|Ga0138513_100036621	Not Available	726	Open in IMG/M
3300011106\|Ga0151489_1281511	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300011444\|Ga0137463_1369396	Not Available	512	Open in IMG/M
3300012203\|Ga0137399_10347404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1232	Open in IMG/M
3300012212\|Ga0150985_113166774	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012683\|Ga0137398_11112400	Not Available	543	Open in IMG/M
3300012908\|Ga0157286_10150107	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012941\|Ga0162652_100070396	Not Available	596	Open in IMG/M
3300012951\|Ga0164300_10896743	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012957\|Ga0164303_10036394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2072	Open in IMG/M
3300012958\|Ga0164299_10782707	Not Available	678	Open in IMG/M
3300012987\|Ga0164307_11829080	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300013306\|Ga0163162_11111476	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300013307\|Ga0157372_13419572	Not Available	505	Open in IMG/M
3300014326\|Ga0157380_10401183	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300014745\|Ga0157377_10017159	All Organisms → cellular organisms → Bacteria	3740	Open in IMG/M
3300014969\|Ga0157376_11568268	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300015201\|Ga0173478_10359100	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300015371\|Ga0132258_10946471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2176	Open in IMG/M
3300015372\|Ga0132256_101755213	Not Available	729	Open in IMG/M
3300015373\|Ga0132257_100816048	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300015374\|Ga0132255_100195989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2853	Open in IMG/M
3300015374\|Ga0132255_100728487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1474	Open in IMG/M
3300017792\|Ga0163161_10147198	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300017965\|Ga0190266_10101424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1184	Open in IMG/M
3300018031\|Ga0184634_10015198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2824	Open in IMG/M
3300018051\|Ga0184620_10047643	Not Available	1194	Open in IMG/M
3300018066\|Ga0184617_1271728	Not Available	509	Open in IMG/M
3300018067\|Ga0184611_1025648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1852	Open in IMG/M
3300018073\|Ga0184624_10465771	Not Available	553	Open in IMG/M
3300018076\|Ga0184609_10403760	Not Available	635	Open in IMG/M
3300018081\|Ga0184625_10057357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1959	Open in IMG/M
3300018081\|Ga0184625_10134466	Not Available	1289	Open in IMG/M
3300018082\|Ga0184639_10092371	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300018465\|Ga0190269_10234841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1021	Open in IMG/M
3300018466\|Ga0190268_12252743	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300018469\|Ga0190270_10468911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1189	Open in IMG/M
3300018476\|Ga0190274_10784154	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300018476\|Ga0190274_11554131	Not Available	754	Open in IMG/M
3300018476\|Ga0190274_13909331	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300019356\|Ga0173481_10530126	Not Available	606	Open in IMG/M
3300019876\|Ga0193703_1005734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1807	Open in IMG/M
3300020016\|Ga0193696_1032099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1404	Open in IMG/M
3300020016\|Ga0193696_1127996	Not Available	640	Open in IMG/M
3300021082\|Ga0210380_10031806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2258	Open in IMG/M
3300021082\|Ga0210380_10238588	Not Available	824	Open in IMG/M
3300022756\|Ga0222622_10811063	Not Available	684	Open in IMG/M
3300024055\|Ga0247794_10331558	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300025893\|Ga0207682_10549997	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300025904\|Ga0207647_10149679	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300025923\|Ga0207681_11437899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria → Frateuria defendens	578	Open in IMG/M
3300025925\|Ga0207650_10249599	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300025930\|Ga0207701_10983913	Not Available	703	Open in IMG/M
3300025933\|Ga0207706_11330301	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300025937\|Ga0207669_10344010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1149	Open in IMG/M
3300025938\|Ga0207704_10024612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3269	Open in IMG/M
3300025942\|Ga0207689_10073994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2799	Open in IMG/M
3300025961\|Ga0207712_10369742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1197	Open in IMG/M
3300025972\|Ga0207668_10272828	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300026041\|Ga0207639_10324964	All Organisms → cellular organisms → Bacteria → Proteobacteria	1367	Open in IMG/M
3300026067\|Ga0207678_11047647	Not Available	722	Open in IMG/M
3300026142\|Ga0207698_12094221	Not Available	579	Open in IMG/M
3300027310\|Ga0207983_1038267	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300027383\|Ga0209213_1012742	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300027388\|Ga0208995_1000772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4817	Open in IMG/M
3300027546\|Ga0208984_1020238	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300027669\|Ga0208981_1019149	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300028379\|Ga0268266_12172572	Not Available	527	Open in IMG/M
3300028704\|Ga0307321_1089156	Not Available	618	Open in IMG/M
3300028707\|Ga0307291_1087496	Not Available	771	Open in IMG/M
3300028707\|Ga0307291_1103897	Not Available	709	Open in IMG/M
3300028710\|Ga0307322_10001713	All Organisms → cellular organisms → Bacteria → Proteobacteria	4509	Open in IMG/M
3300028716\|Ga0307311_10014291	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300028719\|Ga0307301_10079309	Not Available	1029	Open in IMG/M
3300028721\|Ga0307315_10034442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1365	Open in IMG/M
3300028754\|Ga0307297_10069537	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300028754\|Ga0307297_10246842	Not Available	634	Open in IMG/M
3300028755\|Ga0307316_10040593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1544	Open in IMG/M
3300028768\|Ga0307280_10293246	Not Available	592	Open in IMG/M
3300028778\|Ga0307288_10314924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria → Frateuria defendens	625	Open in IMG/M
3300028782\|Ga0307306_10069310	Not Available	905	Open in IMG/M
3300028793\|Ga0307299_10014016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2845	Open in IMG/M
3300028793\|Ga0307299_10174381	Not Available	809	Open in IMG/M
3300028796\|Ga0307287_10179554	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300028796\|Ga0307287_10259713	Not Available	657	Open in IMG/M
3300028796\|Ga0307287_10385749	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300028802\|Ga0307503_10012854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2538	Open in IMG/M
3300028803\|Ga0307281_10176155	Not Available	761	Open in IMG/M
3300028810\|Ga0307294_10323952	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300028824\|Ga0307310_10204109	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300028875\|Ga0307289_10186613	Not Available	853	Open in IMG/M
3300028878\|Ga0307278_10469466	Not Available	550	Open in IMG/M
3300028880\|Ga0307300_10097717	Not Available	883	Open in IMG/M
3300028889\|Ga0247827_10569319	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300030903\|Ga0308206_1109740	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031093\|Ga0308197_10069032	Not Available	968	Open in IMG/M
3300031164\|Ga0307502_10163134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria → Frateuria defendens	512	Open in IMG/M
3300031226\|Ga0307497_10069567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1293	Open in IMG/M
3300031226\|Ga0307497_10405875	Not Available	652	Open in IMG/M
3300031231\|Ga0170824_121635771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1086	Open in IMG/M
3300031469\|Ga0170819_15979628	Not Available	794	Open in IMG/M
3300031720\|Ga0307469_11212797	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031740\|Ga0307468_100172966	Not Available	1422	Open in IMG/M
3300031847\|Ga0310907_10573078	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031892\|Ga0310893_10197143	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300032174\|Ga0307470_11719863	Not Available	529	Open in IMG/M
3300034149\|Ga0364929_0174296	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.33%
Host-Associated	Host-Associated	26.06%
Engineered	Engineered	0.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.45%
Plants	Host-Associated → Plants	26.06%
Aquatic	Environmental → Aquatic	7.88%
Modeled	Engineered → Modeled	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.48%
Sediment	Environmental → Aquatic → Sediment	6.67%
Roots	Host-Associated → Plants → Roots	2.42%
Freshwater	Environmental → Aquatic → Freshwater	1.21%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.21%
Floodplain	Environmental → Terrestrial → Floodplain	0.61%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.52%
Loam	Environmental → Terrestrial → Soil → Loam	12.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.03%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.21%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.21%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.61%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.61%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.82%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.21%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.21%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.61%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.09%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.42%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.21%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.21%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.61%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_617530	2040502001	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASTSDEATAPGWRAGPVREASAAEE
cont_0600.00005020	2166559005	Simulated	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
E41_11184890	2170459005	Grass Soil	LVSRNFDVGADFGLFGSDWIGERNMVSRNPLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
E41_07336660	2170459005	Grass Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRA
F62_08103480	2170459010	Grass Soil	MVSRNLLALTVLPCTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAG
ICChiseqgaiiDRAFT_06987582	3300000033	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEAXAPGXRAGXVREASAAEE*
INPhiseqgaiiFebDRAFT_1005331521	3300000364	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYDRYQASQASASEEATAPGWRAGPVREASAAEE*
JGI11643J11755_114293852	3300000787	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE*
JGI1027J11758_124005131	3300000789	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASXEATAPGWRAGPVREASAAEE*
JGI12053J15887_100092164	3300001661	Forest Soil	MVGRHLLTLTVLACTGVLIAVLSGHLWGRHVQVTDALEFGKTYERYQASQASASDEETAPPWRAGVREASALEE*
C688J35102_1189399602	3300002568	Soil	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
C688J35102_1196659512	3300002568	Soil	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0063454_1011900392	3300004081	Soil	TGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQGSTDDAPIWRAGVREASALEE*
Ga0062593_1024758591	3300004114	Soil	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQGSADDAPIWRAGVREASALEE*
Ga0062595_1017989541	3300004479	Soil	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVR
Ga0066823_100129862	3300005163	Soil	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADEAAPIWRAGVREASALEE*
Ga0066809_101846342	3300005168	Soil	ITLMVLACAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0066810_100425642	3300005169	Soil	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVSEALEFGKTYDRYQASQASADDAPTWRAGAREASALEE*
Ga0070676_110275592	3300005328	Miscanthus Rhizosphere	WEVGTSGVGAHFRFGGPWSGERGMGGRKFITLTVLAGTGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0070683_1015950351	3300005329	Corn Rhizosphere	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAG
Ga0070666_108958422	3300005335	Switchgrass Rhizosphere	RGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0070682_1006257712	3300005337	Corn Rhizosphere	MVGRKLITLTVLACAGALVVVLSGHLWGRYLQVTEALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE*
Ga0070682_1006598262	3300005337	Corn Rhizosphere	MVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQGSADDAPIWRAGVREASALEE*
Ga0070687_1000822463	3300005343	Switchgrass Rhizosphere	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0070661_1005024981	3300005344	Corn Rhizosphere	GGNLGGRRGFLIQGSMVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0070661_1015899181	3300005344	Corn Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE*
Ga0070673_1016052712	3300005364	Switchgrass Rhizosphere	MVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAP
Ga0070713_1014168902	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LLCGGNLGGRRGFLIQGSMVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0070705_1007180581	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQGSTDDAPIWRAGVREASALEE*
Ga0070678_1015080831	3300005456	Miscanthus Rhizosphere	MGGRKFITLTVLAGTGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE*
Ga0070681_117017041	3300005458	Corn Rhizosphere	VLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0068867_1011033101	3300005459	Miscanthus Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDVPIWRAGVREASALEE*
Ga0070672_1011308781	3300005543	Miscanthus Rhizosphere	LIQGSMVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0070695_1011272022	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0070693_1014586292	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MVGRKLIILTVLAGTGGLVAVLSGHLWGRYLQVADALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE*
Ga0070704_1001560131	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADDAAPIWRTGVREASALEE*
Ga0070717_108366952	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPTWRAGAREASALEE*
Ga0075368_102271691	3300006042	Populus Endosphere	MIGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQGSTDDAPIWRAGVREASALEE*
Ga0075363_1007961192	3300006048	Populus Endosphere	TVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQAAAAEEAAAPTWRTGVREASALEE*
Ga0070715_105194252	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MVGRKLITLMVLACAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0075367_100774461	3300006178	Populus Endosphere	MVGERGMVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQGSADDAPIWRAGVREASALEE*
Ga0097621_1002080833	3300006237	Miscanthus Rhizosphere	MGGRKFITLTVLAGTGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPTWRAGAREASALEE*
Ga0074055_118494631	3300006573	Soil	AGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0074060_118226322	3300006604	Soil	GMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0074063_141975762	3300006953	Soil	VWRELRGSARISDSGSMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDA
Ga0105244_104120171	3300009036	Miscanthus Rhizosphere	MVGERGMVVRKLITVIFLVCAGALVVVLSVHLWGRYLQVAVALEFGKTYDRYQASQASADDAPTWRAGAREASALEE*
Ga0105245_100308303	3300009098	Miscanthus Rhizosphere	MVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0111538_101995132	3300009156	Populus Rhizosphere	MVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0111538_137148121	3300009156	Populus Rhizosphere	MVGRKLITLTVLAGTGALVAVLSSHLWGRYLQVTEAMEFGKTYDRYQASQGSADDAPIWRAGVREASALEE*
Ga0105249_121844721	3300009553	Switchgrass Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRDLQVTKAVEFGKTYDRYQASQGSADDAPIWRAGVREASALEE*
Ga0126314_115163191	3300010042	Serpentine Soil	MVGRKLITLTVLAGTGALGAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0134128_107995762	3300010373	Terrestrial Soil	MVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADEAAPIWRAGVREASALEE*
Ga0134124_123125522	3300010397	Terrestrial Soil	MVGRKLITLMVLACAGALVAVLSGHLWGRYLQVTDALEFGKTYDRYQASQASAADEATAPTWRAGVREASALEE*
Ga0134127_128690801	3300010399	Terrestrial Soil	MVGRKLITLTVLACAGALVVVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0134121_121725551	3300010401	Terrestrial Soil	MVGRKLITLMVLACAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADAAAPIWRAGVREASALEE*
Ga0134123_122046501	3300010403	Terrestrial Soil	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0134123_123042002	3300010403	Terrestrial Soil	MVGRKLITLTVLAGTGALVAVLSGHLWGRYLHVTEAMEFGKTYDRYQASQGSTDDAPIWRAGVREASALEE*
Ga0138513_1000366211	3300011000	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYDRYQASQAPADDAPIWRAGVREASARSS
Ga0151489_12815111	3300011106	Soil	QGSMVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0137463_13693962	3300011444	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASGEATAPGWRPEPV
Ga0137399_103474041	3300012203	Vadose Zone Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGSRAGPVREASAAEE*
Ga0150985_1131667741	3300012212	Avena Fatua Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASVADDSAPLWRAGVREASALEE*
Ga0137398_111124001	3300012683	Vadose Zone Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQAPASDEATAPGSRAGPVREASAAEE*
Ga0157286_101501072	3300012908	Soil	TGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE
Ga0162652_1000703961	3300012941	Soil	RNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE*
Ga0164300_108967431	3300012951	Soil	SHSYRRLLCGGNLGGRRGFLIQGSMVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0164303_100363943	3300012957	Soil	MVGRKLITLMVLACAGALVAVLSGHLWGRYLKVTEALEFGKTYDRYQASQASAADDAAPIWRTGVREASALEE*
Ga0164299_107827072	3300012958	Soil	MVGRKLITLMVLACAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADAAAPAWRAGVREASALEE*
Ga0164307_118290802	3300012987	Soil	MVGRKLITLTVLAGTGALVAVLSGHLWGRHLQVTEAMEFGKTYDRYQASQGSADDAPIWRAGVREASALEE*
Ga0163162_111114762	3300013306	Switchgrass Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPTWRAGAREASALEE*
Ga0157372_134195721	3300013307	Corn Rhizosphere	MVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVTEAMEFGKTYDRYQASQGSADDAPIWRAGVREASAL
Ga0157380_104011831	3300014326	Switchgrass Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0157377_100171591	3300014745	Miscanthus Rhizosphere	MVGERGMVARKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE*
Ga0157376_115682682	3300014969	Miscanthus Rhizosphere	MVGRKLITLMVLACAGALVVVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE*
Ga0173478_103591001	3300015201	Soil	MIGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQASADDAPVWRAGVREAAALEE*
Ga0132258_109464713	3300015371	Arabidopsis Rhizosphere	MVGRKLITLMVLACAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADAAAPVWRAGVREASALEE*
Ga0132256_1017552131	3300015372	Arabidopsis Rhizosphere	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASTSDEATAPGWRAGPVREASAAEE*
Ga0132257_1008160482	3300015373	Arabidopsis Rhizosphere	MVGERGMLVRKLITVIVLVCAGALVVVLSGHLWGRYLQVTEALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE*
Ga0132255_1001959891	3300015374	Arabidopsis Rhizosphere	MVGRKLITLMVLACAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADAAAPAWRAGVREASALEE*
Ga0132255_1007284872	3300015374	Arabidopsis Rhizosphere	MVSRNLLALTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGSVREASAAEE*
Ga0163161_101471983	3300017792	Switchgrass Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE
Ga0190266_101014242	3300017965	Soil	MVVRKLITVTVLVCAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASVADDSAPLWRAGVREASALEE
Ga0184634_100151983	3300018031	Groundwater Sediment	MVSRNLLMLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0184620_100476432	3300018051	Groundwater Sediment	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGSRAGPVREASAAEE
Ga0184617_12717281	3300018066	Groundwater Sediment	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQAPASDEATAPGWRAGPVREASAAEE
Ga0184611_10256484	3300018067	Groundwater Sediment	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASVADDSAPLWRAGVREASALEE
Ga0184624_104657711	3300018073	Groundwater Sediment	MVSRNLLMLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEAI
Ga0184609_104037601	3300018076	Groundwater Sediment	MVSRNLLTLTVLACTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0184625_100573571	3300018081	Groundwater Sediment	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGP
Ga0184625_101344661	3300018081	Groundwater Sediment	MVSRNLLMLTVLACTGALIIVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0184639_100923712	3300018082	Groundwater Sediment	MVGRKLITLTVLACAGALVAVLSGLLWGRYLQVTEALEFGKTYDRYQASQAPADDAPIWRAGVREASALEE
Ga0190269_102348411	3300018465	Soil	GSARILDSGSMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0190268_122527432	3300018466	Soil	MVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQASAADEATTAPTWRAGVREASALEE
Ga0190270_104689112	3300018469	Soil	MVVRKLITVTVLACAAALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADEAAPVWRAGVREASALEE
Ga0190274_107841541	3300018476	Soil	ILDSGSMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0190274_115541311	3300018476	Soil	VRRELWGSARILDSGSMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASVADDSAPLW
Ga0190274_139093312	3300018476	Soil	DSGSMVGERGMVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQASAADEATAPTWRAGVREASALEE
Ga0173481_105301261	3300019356	Soil	LIQGSMVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE
Ga0193703_10057341	3300019876	Soil	GERGMVVRKLITVTVLVCAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASVADDSAPLWRAGVREASALEE
Ga0193696_10320993	3300020016	Soil	TVTVLVCAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASVADDSAPLWRAGVREASALEE
Ga0193696_11279961	3300020016	Soil	MIGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0210380_100318064	3300021082	Groundwater Sediment	MVVRKLITVTVLVCAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQAPADDAPIWRAGVREASALEE
Ga0210380_102385881	3300021082	Groundwater Sediment	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASGEATAPGWRPEPVREASAAEE
Ga0222622_108110631	3300022756	Groundwater Sediment	LIRGSMVGERGMVVRKLITVTVLVCAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASVADDSAPLWRAGVREASALEE
Ga0247794_103315581	3300024055	Soil	SMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE
Ga0207682_105499971	3300025893	Miscanthus Rhizosphere	ASPRPAKVSPNSHSCRRLLCGGNLGGRRGFLIQGSMVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE
Ga0207647_101496791	3300025904	Corn Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE
Ga0207681_114378991	3300025923	Switchgrass Rhizosphere	LGGRRGFLIQGSMVGERGMVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE
Ga0207650_102495993	3300025925	Switchgrass Rhizosphere	MVGRKLITLTVLAGTGALVAVLSSHLWGRYLQVTEAMEFGKTYDRYQASQASADDAPVWRAGVREASALEE
Ga0207701_109839131	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VWREPWGSARILDSGSMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0207706_113303011	3300025933	Corn Rhizosphere	QLQETSVRREPWGSARILDSGSMVGERGMVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE
Ga0207669_103440103	3300025937	Miscanthus Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0207704_100246121	3300025938	Miscanthus Rhizosphere	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREAS
Ga0207689_100739944	3300025942	Miscanthus Rhizosphere	MVVRKLITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADEAAPIWRAGVREASALEE
Ga0207712_103697421	3300025961	Switchgrass Rhizosphere	SDSGTMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0207668_102728283	3300025972	Switchgrass Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKSYDRYQASQASADDAPIWRAGVREASALEE
Ga0207639_103249642	3300026041	Corn Rhizosphere	MVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0207678_110476471	3300026067	Corn Rhizosphere	MGGRKFITLTVLAGTGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASLASAAEEAAAPTWRAGVREASALEE
Ga0207698_120942211	3300026142	Corn Rhizosphere	MVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQGSADDAPIWRAGVREASALEE
Ga0207983_10382672	3300027310	Soil	LITVIVLVCAGALVVVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE
Ga0209213_10127423	3300027383	Forest Soil	MVGRHLLTLTVLACTGVLIAVLSGHLWGRHVQVTDALEFGKTYERYQASQASASDEETAPPWRAGVREASALEE
Ga0208995_10007723	3300027388	Forest Soil	MVGRHLLTLTVLACTGVLIAVLSGHLWGRHVQVTDALEFGKTYERYQASQASADEAAPIWRAGGREASALEE
Ga0208984_10202383	3300027546	Forest Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEETAPPWRAGVREASALEE
Ga0208981_10191491	3300027669	Forest Soil	MVGRHLLTLTVLACTGVLTAVLSGHLWGRHVQVTDALEFGKTYERYQASQASASDEETAPPWRAGVREASALEE
Ga0268266_121725722	3300028379	Switchgrass Rhizosphere	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPTWRAGAREASALEE
Ga0307321_10891562	3300028704	Soil	VWREPRGSARISDSGSMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0307291_10874962	3300028707	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307291_11038972	3300028707	Soil	LLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307322_100017131	3300028710	Soil	MVSRNLLTLTVLVCTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307311_100142911	3300028716	Soil	LTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307301_100793091	3300028719	Soil	CTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGSRAGPVREASAAEE
Ga0307315_100344421	3300028721	Soil	MVSRNLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307297_100695371	3300028754	Soil	MVVRKLITVTVLVCAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQSSQASVADDSAPLWRAGVREASALEE
Ga0307297_102468421	3300028754	Soil	MRREPWGSARISDSGSMVGERGMVGRKLITLTVLAGTGALVAVLSGHLWGRYLQVTEAMEFGKTYDRYQASQASAADEATTAPTWRAGVREASALEE
Ga0307316_100405931	3300028755	Soil	SRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307280_102932461	3300028768	Soil	NLLTLTVLVCTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307288_103149241	3300028778	Soil	GPAKVSPNSHSCRRLLWGGNLGGRRGFLIRGSMVGERGMVVRKLITVTVLVCAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0307306_100693101	3300028782	Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAP
Ga0307299_100140164	3300028793	Soil	ACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0307299_101743811	3300028793	Soil	TVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307287_101795542	3300028796	Soil	TVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0307287_102597131	3300028796	Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQALQASASDEATAP
Ga0307287_103857492	3300028796	Soil	RKLITVTVLVCAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASVADDSAPLWRAGVREASALEE
Ga0307503_100128543	3300028802	Soil	MVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0307281_101761551	3300028803	Soil	MVSRNLLTLTVLVCTGALIMVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307294_103239521	3300028810	Soil	LACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0307310_102041091	3300028824	Soil	LWGGNLGGRRGFLIRGSMVGERGMVVRKLITVTVLVCAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASVADDSAPLWRAGVREASALEE
Ga0307314_102594831	3300028872	Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAR
Ga0307289_101866131	3300028875	Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAA
Ga0307278_104694661	3300028878	Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEAPAPGSRAG
Ga0307300_100977171	3300028880	Soil	NLLTLTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0247827_105693191	3300028889	Soil	QETSVWREPRGSARISDSGSIVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0308206_11097402	3300030903	Soil	MVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQAPADDAPIWRAGVREASALEE
Ga0308197_100690321	3300031093	Soil	RRRFCLLGPWIGERNMVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKSYERYQASQASASDEATAPGWRAGPVREASAAEE
Ga0307502_101631341	3300031164	Soil	GRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0307497_100695672	3300031226	Soil	MVSRNLLALTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGSVREASAAEE
Ga0307497_104058751	3300031226	Soil	VWREPRGSARISDSGSMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADD
Ga0170824_1216357713	3300031231	Forest Soil	MVSRNLLTLTVLTCTGALILVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGSVREASAAEE
Ga0170819_159796281	3300031469	Forest Soil	LTVLACTGALIMVLSGHLWGRYVQVTDALEFGKTYERYQASQASASDEATAPGWRAGSVREASAAEE
Ga0307469_112127972	3300031720	Hardwood Forest Soil	MVGRKLITLMVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0307468_1001729662	3300031740	Hardwood Forest Soil	VWREPRGSARISDSGSIVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0310907_105730781	3300031847	Soil	DSGSMVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE
Ga0310893_101971432	3300031892	Soil	MVGERGMVGRKLITLTVLACAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASADDAPVWRAGVREASALEE
Ga0307470_117198632	3300032174	Hardwood Forest Soil	MVGRKLITLMVLACAGALVAVLSGHLWGRYLQVAEALEFGKTYDRYQASQASAADAAAPVWRAGVREASALEE
Ga0364929_0174296_491_682	3300034149	Sediment	LTVLACAGALVAVLSGHLWGRYLQVTEALEFGKTYDRYQASQASADDAPIWRAGVREASALEE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038880

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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