Metagenome / Metatranscriptome Family F038763

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F038763
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	55 residues
Representative Sequence	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR
Number of Associated Samples	130
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.82 %
% of genes near scaffold ends (potentially truncated)	27.88 %
% of genes from short scaffolds (< 2000 bps)	63.03 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.455 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.758 % of family members)
Environment Ontology (ENVO)	Unclassified (30.303 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.37% β-sheet: 0.00% Coil/Unstructured: 56.63%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF05988	DUF899	43.64
PF00106	adh_short	5.45
PF03795	YCII	4.24
PF01638	HxlR	3.64
PF04542	Sigma70_r2	3.03
PF01909	NTP_transf_2	3.03
PF04191	PEMT	2.42
PF13427	DUF4111	2.42
PF03460	NIR_SIR_ferr	1.82
PF00583	Acetyltransf_1	1.21
PF00698	Acyl_transf_1	0.61
PF02687	FtsX	0.61
PF12704	MacB_PCD	0.61
PF00069	Pkinase	0.61
PF07702	UTRA	0.61
PF11799	IMS_C	0.61
PF08327	AHSA1	0.61
PF12680	SnoaL_2	0.61
PF08281	Sigma70_r4_2	0.61
PF06841	Phage_T4_gp19	0.61
PF02952	Fucose_iso_C	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	43.64
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.24
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	3.64
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	3.03
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	3.03
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	3.03
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	3.03
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.42
COG2407	L-fucose isomerase or related protein	Carbohydrate transport and metabolism [G]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.67 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.06 %
Unclassified	root	N/A	13.33 %
Viruses	superkingdom	All Organisms → Viruses	0.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.45 %
Unclassified	root	N/A	13.33 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.03 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.21 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.21 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.61 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.21 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.61 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.21 %
Antrihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Antrihabitans	0.61 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	1.21 %
Antrihabitans stalactiti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Antrihabitans → Antrihabitans stalactiti	0.61 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1.21 %
Antrihabitans stalactiti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Antrihabitans → Antrihabitans stalactiti	0.61 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17486401	All Organisms → cellular organisms → Bacteria	3873	Open in IMG/M
2162886012\|MBSR1b_contig_10152996	Not Available	947	Open in IMG/M
3300002907\|JGI25613J43889_10009718	All Organisms → cellular organisms → Bacteria → Proteobacteria	2658	Open in IMG/M
3300004092\|Ga0062389_100104476	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300004633\|Ga0066395_10017275	All Organisms → cellular organisms → Bacteria	2805	Open in IMG/M
3300004633\|Ga0066395_10648754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	623	Open in IMG/M
3300005167\|Ga0066672_10373807	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005172\|Ga0066683_10900316	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005174\|Ga0066680_10146208	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300005176\|Ga0066679_11038845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	508	Open in IMG/M
3300005178\|Ga0066688_10047905	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300005180\|Ga0066685_10120804	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005181\|Ga0066678_10299708	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005186\|Ga0066676_10368387	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005293\|Ga0065715_10942065	Not Available	562	Open in IMG/M
3300005295\|Ga0065707_10422695	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005450\|Ga0066682_10379215	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005451\|Ga0066681_10263519	Not Available	1048	Open in IMG/M
3300005468\|Ga0070707_100098622	All Organisms → cellular organisms → Bacteria	2830	Open in IMG/M
3300005471\|Ga0070698_100021419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6770	Open in IMG/M
3300005534\|Ga0070735_10193339	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300005536\|Ga0070697_100080395	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300005544\|Ga0070686_100312191	All Organisms → Viruses → Predicted Viral	1169	Open in IMG/M
3300005546\|Ga0070696_100060077	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300005554\|Ga0066661_10703808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	593	Open in IMG/M
3300005557\|Ga0066704_10276387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1139	Open in IMG/M
3300005563\|Ga0068855_101346930	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005591\|Ga0070761_10017455	All Organisms → cellular organisms → Bacteria	3987	Open in IMG/M
3300005602\|Ga0070762_10443399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	843	Open in IMG/M
3300005764\|Ga0066903_100265200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2671	Open in IMG/M
3300005764\|Ga0066903_101992783	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300006176\|Ga0070765_100109948	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300006755\|Ga0079222_10071516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1709	Open in IMG/M
3300006797\|Ga0066659_10034940	All Organisms → cellular organisms → Bacteria	3046	Open in IMG/M
3300006797\|Ga0066659_10829580	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300006804\|Ga0079221_10064025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1694	Open in IMG/M
3300006854\|Ga0075425_100001002	All Organisms → cellular organisms → Bacteria	27104	Open in IMG/M
3300006854\|Ga0075425_100189311	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300007258\|Ga0099793_10079069	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300009012\|Ga0066710_100158607	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M
3300009137\|Ga0066709_100241434	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300009137\|Ga0066709_100245582	All Organisms → cellular organisms → Bacteria	2392	Open in IMG/M
3300009137\|Ga0066709_102082625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300009137\|Ga0066709_102206037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300009137\|Ga0066709_102354034	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300009137\|Ga0066709_103897473	Not Available	542	Open in IMG/M
3300010048\|Ga0126373_10038103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4205	Open in IMG/M
3300010048\|Ga0126373_10073407	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300010048\|Ga0126373_10189866	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300010323\|Ga0134086_10283564	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010335\|Ga0134063_10107479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300010336\|Ga0134071_10068939	All Organisms → cellular organisms → Bacteria → Proteobacteria	1637	Open in IMG/M
3300010358\|Ga0126370_10001913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9685	Open in IMG/M
3300010358\|Ga0126370_10064496	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300010358\|Ga0126370_10328126	Not Available	1227	Open in IMG/M
3300010358\|Ga0126370_10598852	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300010358\|Ga0126370_12430945	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010359\|Ga0126376_10849594	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300010360\|Ga0126372_12097453	Not Available	613	Open in IMG/M
3300010361\|Ga0126378_10440607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1417	Open in IMG/M
3300010361\|Ga0126378_11365442	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300010361\|Ga0126378_12386986	Not Available	604	Open in IMG/M
3300010361\|Ga0126378_13313330	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300010366\|Ga0126379_13556805	Not Available	522	Open in IMG/M
3300010366\|Ga0126379_13725375	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010376\|Ga0126381_100006711	All Organisms → cellular organisms → Bacteria	12764	Open in IMG/M
3300010376\|Ga0126381_100488161	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300010376\|Ga0126381_100724621	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300010379\|Ga0136449_102689907	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300010379\|Ga0136449_104551816	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010863\|Ga0124850_1071862	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300012199\|Ga0137383_10035521	All Organisms → cellular organisms → Bacteria	3523	Open in IMG/M
3300012200\|Ga0137382_10379066	Not Available	995	Open in IMG/M
3300012202\|Ga0137363_10052935	All Organisms → cellular organisms → Bacteria	2917	Open in IMG/M
3300012205\|Ga0137362_11742554	Not Available	510	Open in IMG/M
3300012207\|Ga0137381_11380444	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012208\|Ga0137376_11280287	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300012210\|Ga0137378_11137758	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012211\|Ga0137377_11574337	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012350\|Ga0137372_10268494	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300012359\|Ga0137385_10477247	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300012361\|Ga0137360_11591554	Not Available	558	Open in IMG/M
3300012532\|Ga0137373_11241986	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012918\|Ga0137396_10061479	All Organisms → cellular organisms → Bacteria	2604	Open in IMG/M
3300012925\|Ga0137419_10998907	Not Available	693	Open in IMG/M
3300012927\|Ga0137416_10119103	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300012948\|Ga0126375_10889745	Not Available	714	Open in IMG/M
3300012972\|Ga0134077_10354523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	626	Open in IMG/M
3300015357\|Ga0134072_10082839	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300016270\|Ga0182036_10441375	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300016371\|Ga0182034_10257977	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300016387\|Ga0182040_10559329	Not Available	921	Open in IMG/M
3300016404\|Ga0182037_10046136	All Organisms → cellular organisms → Bacteria	2881	Open in IMG/M
3300016404\|Ga0182037_11642511	Not Available	572	Open in IMG/M
3300017656\|Ga0134112_10495919	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300017927\|Ga0187824_10008750	All Organisms → cellular organisms → Bacteria	2881	Open in IMG/M
3300017927\|Ga0187824_10013750	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300017935\|Ga0187848_10431589	Not Available	541	Open in IMG/M
3300017936\|Ga0187821_10279789	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300017973\|Ga0187780_10048790	All Organisms → cellular organisms → Bacteria	2941	Open in IMG/M
3300018058\|Ga0187766_10668409	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300018062\|Ga0187784_10320031	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300018088\|Ga0187771_10541455	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300018090\|Ga0187770_10009641	All Organisms → cellular organisms → Bacteria	6078	Open in IMG/M
3300020170\|Ga0179594_10077370	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300020199\|Ga0179592_10002078	All Organisms → cellular organisms → Bacteria	8297	Open in IMG/M
3300020579\|Ga0210407_10378762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Antrihabitans → Antrihabitans stalactiti	1107	Open in IMG/M
3300020579\|Ga0210407_11023571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300020580\|Ga0210403_11195795	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300020582\|Ga0210395_10000088	All Organisms → cellular organisms → Bacteria	73499	Open in IMG/M
3300020582\|Ga0210395_10013679	All Organisms → cellular organisms → Bacteria	5998	Open in IMG/M
3300021046\|Ga0215015_11064451	Not Available	623	Open in IMG/M
3300021168\|Ga0210406_10000075	All Organisms → cellular organisms → Bacteria	154083	Open in IMG/M
3300021170\|Ga0210400_10062552	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300021171\|Ga0210405_10733796	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300021420\|Ga0210394_10015090	All Organisms → cellular organisms → Bacteria	7381	Open in IMG/M
3300021420\|Ga0210394_10505185	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300021476\|Ga0187846_10012177	All Organisms → cellular organisms → Bacteria	4117	Open in IMG/M
3300021560\|Ga0126371_10007260	All Organisms → cellular organisms → Bacteria	9895	Open in IMG/M
3300021560\|Ga0126371_10007309	All Organisms → cellular organisms → Bacteria	9855	Open in IMG/M
3300021560\|Ga0126371_10012432	All Organisms → cellular organisms → Bacteria	7716	Open in IMG/M
3300021560\|Ga0126371_10020501	All Organisms → cellular organisms → Bacteria	6094	Open in IMG/M
3300021560\|Ga0126371_11376029	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300021560\|Ga0126371_11803528	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300024330\|Ga0137417_1457830	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300025899\|Ga0207642_10978103	Not Available	544	Open in IMG/M
3300025922\|Ga0207646_10055542	All Organisms → cellular organisms → Bacteria → Acidobacteria	3540	Open in IMG/M
3300025929\|Ga0207664_10847225	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300026285\|Ga0209438_1145041	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300026317\|Ga0209154_1309764	Not Available	519	Open in IMG/M
3300026318\|Ga0209471_1327321	Not Available	508	Open in IMG/M
3300026320\|Ga0209131_1003833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9949	Open in IMG/M
3300026328\|Ga0209802_1023131	All Organisms → cellular organisms → Bacteria → Proteobacteria	3379	Open in IMG/M
3300026342\|Ga0209057_1061738	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300026538\|Ga0209056_10718449	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300026552\|Ga0209577_10022155	All Organisms → cellular organisms → Bacteria	5610	Open in IMG/M
3300026845\|Ga0207760_101737	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300026959\|Ga0207852_1001007	All Organisms → cellular organisms → Bacteria	3420	Open in IMG/M
3300027765\|Ga0209073_10002419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4118	Open in IMG/M
3300027775\|Ga0209177_10315555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	600	Open in IMG/M
3300027884\|Ga0209275_10336541	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300027889\|Ga0209380_10007509	All Organisms → cellular organisms → Bacteria	6480	Open in IMG/M
3300028906\|Ga0308309_10100860	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300029636\|Ga0222749_10711465	Not Available	550	Open in IMG/M
3300031545\|Ga0318541_10007785	All Organisms → cellular organisms → Bacteria	4667	Open in IMG/M
3300031708\|Ga0310686_103888057	All Organisms → cellular organisms → Bacteria	3857	Open in IMG/M
3300031719\|Ga0306917_10187858	Not Available	1558	Open in IMG/M
3300031744\|Ga0306918_10030929	All Organisms → cellular organisms → Bacteria	3381	Open in IMG/M
3300031744\|Ga0306918_10317098	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300031753\|Ga0307477_10172456	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300031823\|Ga0307478_10004003	All Organisms → cellular organisms → Bacteria	10653	Open in IMG/M
3300031823\|Ga0307478_10089277	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300031879\|Ga0306919_11047905	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031880\|Ga0318544_10106381	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031894\|Ga0318522_10284724	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031910\|Ga0306923_10079707	All Organisms → cellular organisms → Bacteria	3668	Open in IMG/M
3300031941\|Ga0310912_10406362	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031942\|Ga0310916_10084035	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300031945\|Ga0310913_11293535	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	506	Open in IMG/M
3300031946\|Ga0310910_11183844	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031954\|Ga0306926_10354938	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300032035\|Ga0310911_10353603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300032044\|Ga0318558_10589160	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300032180\|Ga0307471_100000074	All Organisms → cellular organisms → Bacteria	44736	Open in IMG/M
3300032180\|Ga0307471_100154453	All Organisms → cellular organisms → Bacteria	2215	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.36%
Host-Associated	Host-Associated	3.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.33%
Plants	Host-Associated → Plants	3.64%
Aquatic	Environmental → Aquatic	3.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.73%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.21%
Cave	Environmental → Terrestrial → Cave	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.58%
Loam	Environmental → Terrestrial → Soil → Loam	12.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.21%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.21%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.21%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.61%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.61%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03669450	2088090014	Soil	MCPFCMASIGMIVASATSAGGLTALALKLSRKKKLGQEVTPNSSESSSQVKRLMPGPKA
MBSR1b_0754.00006850	2162886012	Miscanthus Rhizosphere	MGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR
JGI25613J43889_100097182	3300002907	Grasslands Soil	MCPFCLASMGLIVASATSAGGLTVLAVKLSRKKSDKKESPNSNERSNQDVNANSR*
Ga0062389_1001044762	3300004092	Bog Forest Soil	MCPFCLASMGLIVVSATSAGGLTALAVKLGRKKSNAKEIPNPNERSNQNVNPNSR*
Ga0066395_100172752	3300004633	Tropical Forest Soil	MCPFCLAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS*
Ga0066395_106487541	3300004633	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIERSNEDVRENR*
Ga0066672_103738072	3300005167	Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPISIERSNENESSNENVNQNSR*
Ga0066683_109003161	3300005172	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRKKNDVKENPSSNERSNEDVNQNSR*
Ga0066680_101462083	3300005174	Soil	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVSPNSSESSSQVKRLMPGPKA*
Ga0066679_110388451	3300005176	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRRKNDVREIPNSNERSNKDVNQNSR*
Ga0066688_100479051	3300005178	Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIE
Ga0066685_101208042	3300005180	Soil	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR*
Ga0066678_102997082	3300005181	Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIERSKENVN*
Ga0066676_103683872	3300005186	Soil	MCPFCLASMGLIVASATSAGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVN
Ga0065715_109420651	3300005293	Miscanthus Rhizosphere	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR*
Ga0065707_104226952	3300005295	Switchgrass Rhizosphere	MCPFCMASIGMIVASATSAGGLTALALKLSRKKKLGQEVTPNSSESSSQVKRLMPGPKA*
Ga0066682_103792152	3300005450	Soil	MCPFCLATMGLIVASATSAGGLTALAVKLSRKRNKMKEIPNSNERSNQDVNPNSR*
Ga0066681_102635192	3300005451	Soil	VAGVTSAGGLTALAVKLSRKKNDVKENPSSNERSNEDVNQNSR*
Ga0070707_1000986224	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVTPNSSESSSQVNRLMPGPKA*
Ga0070698_1000214196	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKKDAKEISNSKEGRNENVNLNSR*
Ga0070735_101933392	3300005534	Surface Soil	MCPVCLASMGMIVAGVTSAGGLTALAVKLSRKKDDAREIPNSNERSNEDGSKQKE*
Ga0070697_1000803953	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVSPNSIESSSQVKRLMPGPNA*
Ga0070686_1003121911	3300005544	Switchgrass Rhizosphere	RSRGDAMCPFCLASMGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR*
Ga0070696_1000600774	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR*
Ga0066661_107038082	3300005554	Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPISIER
Ga0066704_102763871	3300005557	Soil	MCPFCMAAIGQIAAGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIERSNENVHQNSR*
Ga0068855_1013469301	3300005563	Corn Rhizosphere	FATRSRGDAMCPFCLASMGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR*
Ga0070761_100174556	3300005591	Soil	MCPFCIASMGLIVAGATSAGGLTALAVKLSRKKNNAGEITPNSYERSSQDVNPNSR*
Ga0070762_104433992	3300005602	Soil	MCPFCIAALGQVVAGVVSAGGLTALAVKLSRKKDNSNEIPNPHAIERSNQNESSS*
Ga0066903_1002652003	3300005764	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIKRSNEDVRENR*
Ga0066903_1019927832	3300005764	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNTKETPSSNSNERSKQDVKPNS*
Ga0070765_1001099484	3300006176	Soil	MCPFCLASMGLIVASTTSAGGLTILAVKLSRKKSDQKEIPNSNERSNQDVNPNSR*
Ga0079222_100715162	3300006755	Agricultural Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEIPNPDSIERSNENVSQNVR*
Ga0066659_100349402	3300006797	Soil	MCPFCLASMGLIVASVTSAGGLTALAVKLSRKKSNAKEIPNLNERGNQDANPNSR*
Ga0066659_108295802	3300006797	Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKSNAKEIPNPISIERSNENESSNENVNQNSR*
Ga0079221_100640252	3300006804	Agricultural Soil	MCPFCMVAIGQIVAGVVSAGGLTAVAVKLSLKKSNAKEIPNPNSIERSNENVSQNCR*
Ga0075425_10000100217	3300006854	Populus Rhizosphere	MCPFCMASIGMIVAGATSDGGLTALAVKLSRKKKLGREVTPNSTERSSQVKRLMPSPKA*
Ga0075425_1001893112	3300006854	Populus Rhizosphere	MCPFCMASIGMIVAGATSARGLTALAVKLSRKKKLGQEVTPNSGESSSQVNRLMPGPKAEVHRCS*
Ga0099793_100790692	3300007258	Vadose Zone Soil	MGLIVAGATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR*
Ga0066710_1001586072	3300009012	Grasslands Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPNSIERSKENVN
Ga0066709_1002414342	3300009137	Grasslands Soil	MIVASATSAGGLTALAVKLSRKKSKVKEIPNPYERSNQDVNPNSR*
Ga0066709_1002455823	3300009137	Grasslands Soil	MIVAGVTSAGGLTALAVKLSRKKNDVKENPSSNERSNEDVNQNSR*
Ga0066709_1020826252	3300009137	Grasslands Soil	MGLIVASATSAGGLTVLAVKLSRKKNNAKKFQIRMKGAIQDVNPNRR*
Ga0066709_1022060372	3300009137	Grasslands Soil	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVSPNSSESSLQVKRLMPGSKA*
Ga0066709_1023540341	3300009137	Grasslands Soil	MAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPISIERSNENESSNENVNQNSR*
Ga0066709_1038974732	3300009137	Grasslands Soil	MGLIVASATSAGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVNSNNR*
Ga0126373_100381034	3300010048	Tropical Forest Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKQILNLNAMERRNQNESSSQDVNPHSR*
Ga0126373_100734073	3300010048	Tropical Forest Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIERSNEDVRENR*
Ga0126373_101898662	3300010048	Tropical Forest Soil	MCPFCLAAIGQIVAGVVSAGGQTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS*
Ga0134086_102835642	3300010323	Grasslands Soil	MGLIVAGATSAGGLTALAVKLSRKKNNVKEIPNSDERSSQDVNSNSR*
Ga0134063_101074792	3300010335	Grasslands Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIERSKENVN*
Ga0134071_100689392	3300010336	Grasslands Soil	MGLIVASATSAGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVNTNNR*
Ga0126370_1000191312	3300010358	Tropical Forest Soil	MCPFCIAAIGQIVAAGVVSAGGLTAVAVKLSRKKYEAKEIPSAKPIERSNENVEHNS*
Ga0126370_100644964	3300010358	Tropical Forest Soil	FATWEVKTMCPFCLAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS*
Ga0126370_103281261	3300010358	Tropical Forest Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISI
Ga0126370_105988522	3300010358	Tropical Forest Soil	CMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIKRSNEDVRENR*
Ga0126370_124309452	3300010358	Tropical Forest Soil	CMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIERSNEDVKENS*
Ga0126376_108495942	3300010359	Tropical Forest Soil	MGLIVASATSAGGLTALAMKLSGKKGDAKEIPSSDSSERSN*
Ga0126372_120974532	3300010360	Tropical Forest Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSSAKEILSSDSNERSNED
Ga0126378_104406073	3300010361	Tropical Forest Soil	RSFATWEVKTMCPFCLAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS*
Ga0126378_113654421	3300010361	Tropical Forest Soil	FCLAAIGQVVAGVVSAGGLTAVAVKLSRKKDNAKVIPSSNSNERSNENVEENS*
Ga0126378_123869861	3300010361	Tropical Forest Soil	KGDAMCPFCLANIGLIVAGATSAGGLTALAVKLSRKKDNPKEIPNPKSIERSKSE*
Ga0126378_133133301	3300010361	Tropical Forest Soil	KKLRHREVKTMCPFCMAAIGQIVAGVVSAGGMTAVAVNLSRKKNNAKEIPNPESIERSNENVEENNR*
Ga0126379_135568052	3300010366	Tropical Forest Soil	MCPFCLASIGLIVAGATSAGGLTALAVKLSRKKDSPKEIQPKSIERSKQNE
Ga0126379_137253751	3300010366	Tropical Forest Soil	AANKLRHREVKTMCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIERSNEDVKENS*
Ga0126381_1000067118	3300010376	Tropical Forest Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSSAKEILSSDSNERSNEDVEENSR*
Ga0126381_1004881613	3300010376	Tropical Forest Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKSNAKEIPNPNSIERSNRNVLQKSR*
Ga0126381_1007246212	3300010376	Tropical Forest Soil	MCPFCLAAIGQIVAGVVSAGGLTAMAVKLSLKKNNAKEISDPNSNERSNENVEENS*
Ga0136449_1026899071	3300010379	Peatlands Soil	MCPVCLASMGMIVAGVTSAGGLTALAVKLSLKRKDAREIASSNSNERSNEDVNQNSR*
Ga0136449_1045518162	3300010379	Peatlands Soil	MIVASTTSAGGLTALAVKLSRKKNNVKVFPKSNERSSQSVNPNS
Ga0124850_10718621	3300010863	Tropical Forest Soil	RSFATGRQNASPPGGKTMCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIKRSNEDVRENR*
Ga0137383_100355211	3300012199	Vadose Zone Soil	MAAIGQIAVGVVSAGGLTAVAVKLSRKKTNAKEIPNPN
Ga0137382_103790662	3300012200	Vadose Zone Soil	VGMIVAGVTSAGGLTALAVKLSRKKNDASEIPNSSERSNEDVNQNIR*
Ga0137363_100529352	3300012202	Vadose Zone Soil	MGLIVASATSAGGLTVLAVKLSRKKTDKKEIPNSNESSNQDVNPNSR*
Ga0137362_117425541	3300012205	Vadose Zone Soil	MGLIVASATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR*
Ga0137381_113804442	3300012207	Vadose Zone Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAKEIPNPNSIERSNENVSQNVR*
Ga0137376_112802872	3300012208	Vadose Zone Soil	MAAIGQIAAGVVSAGGLTAVAVKLSRKKTNAKEIPNPISIERSNENESSNENVHQNSR*
Ga0137378_111377581	3300012210	Vadose Zone Soil	MGMIVASATSAGGLTVLAVKLSRKKTDNKEIPNSNERSNQNVNQNSR*
Ga0137377_115743371	3300012211	Vadose Zone Soil	MAAIGQIAVGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIERSNEN
Ga0137372_102684942	3300012350	Vadose Zone Soil	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVTPNSSESSSQVKRLMPGPKA*
Ga0137385_104772472	3300012359	Vadose Zone Soil	MGMIVASATSAGGLTVLAVKLSRKKSDKKEIPNSNERSNQNVNENSR*
Ga0137360_115915541	3300012361	Vadose Zone Soil	MGLIVAGVASTGGLAALAVKVSRKKNDANEIQLNSDEKRNDYEAK*
Ga0137373_112419862	3300012532	Vadose Zone Soil	MGLIVASATSVGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVNTNNR*
Ga0137396_100614793	3300012918	Vadose Zone Soil	MGLIVAGATSAGGLTALAVKLSRKKNNAKEITPNSYERSSQDVNPNSR*
Ga0137419_109989072	3300012925	Vadose Zone Soil	SRFATRWRGDAMCPFCLASMGLIVASATSAGGLTVLAVKLARKKSHKKEIPNSNERSNHDVNPNSR*
Ga0137416_101191031	3300012927	Vadose Zone Soil	MGLIVASATSAGGLTVLAVKLARKKSHKKEIPNSNERSNHDVNPNSR*
Ga0126375_108897451	3300012948	Tropical Forest Soil	MCPFCLAAIGQIVAGVVSAGGLTAVAVKLSLKKNNAKEISDPNSNERSNENVEENS*
Ga0134077_103545232	3300012972	Grasslands Soil	GLIVADATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR*
Ga0134072_100828391	3300015357	Grasslands Soil	MGLIVAGGTSAGGLTVLAVKLSRKKNNAKEIPSSNSNERSNEN
Ga0182036_104413752	3300016270	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSYQNVVQNSR
Ga0182034_102579773	3300016371	Soil	MALIATGATSAGGLTVLAMKLSRKKNNPGEIVSSNSIERCNEDAQQNSR
Ga0182040_105593291	3300016387	Soil	MCPFCLASMGLIVAGATSAGGLTALAVRLSRKKNNAKEIHSPNSNEGSNENEGGSKDVNQ
Ga0182037_100461362	3300016404	Soil	MCPFCMAAIAQIVAGAVSAGSLTAFTVKLSRKKDNPREIVSSNSIERSNEDAQQNSR
Ga0182037_116425111	3300016404	Soil	CPFCLASMGLIVAGATSAGGLTALAVKLSRKKNNAKEIHSPNSNEGSNENEGGSKDVNQK
Ga0134112_104959191	3300017656	Grasslands Soil	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKDNAREIPSSSSNERSNEN
Ga0187824_100087504	3300017927	Freshwater Sediment	MCPVCLASMGMIVAGVTSAGGLTALAVKLSRKKDDAREIPNSNERSNEDGSKQKE
Ga0187824_100137502	3300017927	Freshwater Sediment	MCPVCLASVGWIVAGAATSAGGLTALAVKLSRKKTSAREIPNSNKERSIENVYANSR
Ga0187848_104315892	3300017935	Peatland	SGHASPPEPRGDAMCPFCLASMGLIVASATSAGGLAVLAVKLSRKKNGVKEIPNSNSNERSNEDVNQNSR
Ga0187821_102797891	3300017936	Freshwater Sediment	FAGATSAGGLTVLAVKLSRKKNDAKEIPNSNERNIQNVYANSR
Ga0187780_100487901	3300017973	Tropical Peatland	MCPFCLSTIGLVVANAVTTGGLTALVVKVSRKKSDVKEITPKSNERKMPTQR
Ga0187766_106684091	3300018058	Tropical Peatland	MCPFCLATMGMIVASATSAGSLTVLAAKWSRKKDQGKKVPNSNDSKERSNPDVNQNSQ
Ga0187784_103200312	3300018062	Tropical Peatland	MCPFCLASIGLIAVKAASAGGLTALAVKLSRKKKDVREIPNSNKRSNENANQNSR
Ga0187771_105414552	3300018088	Tropical Peatland	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKGNAKEIPNSNEWRNQNESSR
Ga0187770_100096415	3300018090	Tropical Peatland	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKGNAKEIPNSNEWRNQNESSRQDVNQNS
Ga0179594_100773703	3300020170	Vadose Zone Soil	ASMGLIVASVTSAGGLTALAVKLSRKKINAKEIPNLNERSNQDVNPNSR
Ga0179592_100020786	3300020199	Vadose Zone Soil	MCPFCLASMGLIVASATSAGGLTVLAVKLSRKKRDKKESPNSNERSNQDVNADSR
Ga0210407_103787622	3300020579	Soil	MGLIVAGATSAGGLTALAVKLSRKKDNAKEIIPNAGERSSQDDVLAPPS
Ga0210407_110235711	3300020579	Soil	MCPFCLACMGLIVASATSAGGLTALAVKLSRKKNNAKEIIRNSNERSNSNERSGQ
Ga0210403_111957951	3300020580	Soil	MGLIVAGATSAGGLTALAVKLSRKKDNAKEIIPNAGERTSQDDVLAPRS
Ga0210395_100000887	3300020582	Soil	MCPFCLASMGLIVVSATSAGGLTALAVKLGRKKSNAREIPKPKERSNQNVNPNSR
Ga0210395_100136793	3300020582	Soil	MCPFCIASMGLIIAGATSAGGLTALAVKLSRKKNNAREITPNSYERSSQDVNPNSR
Ga0215015_110644511	3300021046	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRKKNDAGESIPNSNERSGAELNTHR
Ga0210406_1000007587	3300021168	Soil	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSQ
Ga0210400_100625525	3300021170	Soil	MCPFCLATMGLIVAGATSAGGLTALAVKLSRKKDNAKEIIPNAGERSSQDDVLAPPS
Ga0210405_107337962	3300021171	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRKKSDVREIPNSNERSNEDVNQNS
Ga0210394_100150904	3300021420	Soil	MCPVCLASMGLMIAGAATSAGGLTALAVKLSRKKTNAKEIPNSNERSNQNVYANSR
Ga0210394_105051851	3300021420	Soil	MGLILAGATSAGGLTALAVKLSRTKNNARAIPNPNERSTQNVNP
Ga0187846_100121774	3300021476	Biofilm	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNSAKEIPNPNSNSSQRSNEDVEQKS
Ga0126371_100072608	3300021560	Tropical Forest Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKSNAKQIPNLNANERRNQNESSSQDVNPHSR
Ga0126371_100073093	3300021560	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIKRSNEDVRENR
Ga0126371_100124322	3300021560	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSSAKEILSSDSNERSNEDVEENSR
Ga0126371_1002050110	3300021560	Tropical Forest Soil	VCPLCVESMGLLVASATSAGGLTARAVKLTRKKNNAKEVSSSNSIERSNENESSNEGVHQNG
Ga0126371_113760291	3300021560	Tropical Forest Soil	KKLRHREVKTMCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS
Ga0126371_118035281	3300021560	Tropical Forest Soil	MCPFCIAAIGQIVAAGVVSAGGLTAVAVKLSRKKNDANEIPSVNSIERSNENVEQNS
Ga0137417_14578302	3300024330	Vadose Zone Soil	MGLIVAGATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR
Ga0207642_109781032	3300025899	Miscanthus Rhizosphere	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR
Ga0207646_100555425	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVTPNSSESSSQVNRLMPGPKA
Ga0207664_108472252	3300025929	Agricultural Soil	MCPFCLACTGLIVASATSAGGLTALAVKLSRKKNNAKEIIRNSNERSKFQ
Ga0209438_11450411	3300026285	Grasslands Soil	MCPFCLASMGLIVASATSAGGLTVLAVKLPRKKRDKKESPNSNERSNQDVN
Ga0209154_13097641	3300026317	Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPISIERSNENESSNENVNQNSR
Ga0209471_13273212	3300026318	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRRKNDVREIPNSNERSNKDVNQNSR
Ga0209131_10038334	3300026320	Grasslands Soil	MCPFCLASMGLIVASATSAGGLTVLAVKLSRKKSDKKESPNSNERSNQDVNANSR
Ga0209802_10231313	3300026328	Soil	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVSPNSSESSSQVKRLMPGPKA
Ga0209057_10617382	3300026342	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRKKNDVKENPSSNERSNEDVNQNSR
Ga0209056_107184491	3300026538	Soil	MGLIVASATSAGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVNSNNR
Ga0209577_100221558	3300026552	Soil	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKSSAKEIRNPDVRSNEDVNSNSR
Ga0207760_1017371	3300026845	Tropical Forest Soil	PFCMTAMAQIVAGAVSAGCLTALAVKLSRKKNNTREILSSNSIDRSNEDAQQNSR
Ga0207852_10010075	3300026959	Tropical Forest Soil	MCPFCMTAMAQIVAGAVSAGCLTALAVKLSRKKNNTREILSSNSIERSNEDAQQNSR
Ga0209073_100024193	3300027765	Agricultural Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEIPNPDSIERSNENVSQNVR
Ga0209177_103155551	3300027775	Agricultural Soil	LAVKKLRHPGGKTMCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEIPNPDSIERSNENVSQNVR
Ga0209275_103365411	3300027884	Soil	MCPFCIAALGQVVAGVVSAGGLTALAVKLSRKKDNSNEIPNPHAIERSNQNESSS
Ga0209380_100075097	3300027889	Soil	MCPFCLASMGLIVVSATSAGGLTALAVKLGRKKSNAREIPNPKERSNQNVNPNSR
Ga0308309_101008601	3300028906	Soil	MCPFCLASMGLIVASTTSAGGLTILAVKLSRKKSDQKEIPNSNERSNQDVNPNSR
Ga0222749_107114651	3300029636	Soil	MCPFCLATMGLIVAGATSAGGLTALAVKLSRKKDNVKEVIPNAGERSSQDDVLAPPS
Ga0318541_100077855	3300031545	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSNQNVVQKSR
Ga0310686_1038880576	3300031708	Soil	MCPFCLASMGLIVAGATSAGGLTALAVKLSLKRNNVKEVTLNTNDRKSRVASEPLAATED
Ga0306917_101878584	3300031719	Soil	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKNNAKEIHSPNSNEGSNENEGGSKDVNQ
Ga0306918_100309292	3300031744	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSDQNVVQKSR
Ga0306918_103170981	3300031744	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKNNPGEIVSSNSIERCNEDAQQNS
Ga0307477_101724562	3300031753	Hardwood Forest Soil	MCPVCLASVGIIVAGAVSTGGLAALAVKVSRKKNDAKEIIPTSNERSGKNVNEHD
Ga0307478_100040036	3300031823	Hardwood Forest Soil	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKSSAKEVPSPKERSSQNDNSNSR
Ga0307478_100892772	3300031823	Hardwood Forest Soil	MCPVCLASVGIIVAGAVSTGGLAALAVKVSRKKNDGREIIPTSNERSGKNVNEHD
Ga0306919_110479052	3300031879	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKDNPREMVSSNSIERSNEDAQQNSR
Ga0318544_101063813	3300031880	Soil	STIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSNQNVVQKSR
Ga0318522_102847241	3300031894	Soil	ISGHAPPPELRGDAMCPFCLASMGLIVAGATSAGGLTALAVKLSRKKNNAKEIPNPNSIERSDQNVVQKSR
Ga0306923_100797073	3300031910	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKDNPREIVSSNSIERSNEDAQQNSR
Ga0310912_104063621	3300031941	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKNNPGEIVSSNSIERCNE
Ga0310916_100840353	3300031942	Soil	MCPFCMAAIAQIVAGAVSAGSLTALTVKLSRKKDNPREIVSSNSIERSNEDAQQNSR
Ga0310913_112935352	3300031945	Soil	PVREVNAMCPFCLASMGLIVAGATSAGGLTALAVKLSRKKNNAKEIHSPNSNEGSNENEGGSKDVNQK
Ga0310910_111838442	3300031946	Soil	TMCPFCMAAIAQIVAGAVSAGSLTALTVKLSRKKDNPREIVSSNSIERSNEDAQQNSR
Ga0306926_103549382	3300031954	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKQIPNLNAMERRNQNESSSQDVNPHSR
Ga0310911_103536031	3300032035	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSNQNVVQK
Ga0318558_105891602	3300032044	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKNNPGEIVSSNSIERCNEDAQQNSR
Ga0307471_10000007413	3300032180	Hardwood Forest Soil	MCPFCVAAIGQIVAGVVSAGGLTALAVKLSRKKSNAKEIPNPNSNERSNQNVSQNIR
Ga0307471_1001544531	3300032180	Hardwood Forest Soil	MGLIVASATSAGGLTALAVKLSRKKSSAKEVPSPKERSSQND

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038763

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences